RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC19 (Homo sapiens)

Ensembl gene IDs: ENSG00000011295

Ensembl transcript IDs: ENST00000261647.10, ENST00000465567.1, ENST00000466729.5, ENST00000470399.1, ENST00000470649.1, ENST00000475723.5, ENST00000481107.1, ENST00000497842.6, ENST00000578103.1, ENST00000583704.1

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCAGAGCTTTTTCATACATCCTTTGTGCCTGTGACGGCTGCTTaGAGAACAGAAGGTAGCGAGCACAGGCGTCTAAGCACATGCCCA +
Preference number: 1 (lower is better)
Translates to: SAELFHTSFVPVTAA*RTEGSEHRRLSTCP
Trigger: TGGGCATGTGCTTAGACGCCTGTGCTCGCTACCTTCTGTTCTCCAAGCAGCCGTCACAGGCACAAAGGATGTATGAAAAAGCTCTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR TCA 90 bp GGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTaGATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAA +
Preference number: 1 (lower is better)
Translates to: GSKSADQKLMVEMPG*ITTPTAHRNTSPYE
Trigger: TTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR GCA 90 bp ACAATGGTCTGTGGGTGTCTTTCTCCTTGTATTTCTTCAGAAATCTaGAGAGCTTTTTCATACATCCTTTGTGCCTGTGACGGCTGCTTG +
Preference number: 1 (lower is better)
Translates to: TMVCGCLSPCISSEI*RAFSYILCACDGCL
Trigger: CAAGCAGCCGTCACAGGCACAAAGGATGTATGAAAAAGCTCTGCAGATTTCTGAAGAAATACAAGGAGAAAGACACCCACAGACCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR TCA 90 bp CTTGTGTATATCGTTCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTCTTGCCAGAT +
Preference number: 1 (lower is better)
Translates to: LVYIVLCASKLQLDY*VPCVAQDDLSVLPD
Trigger: ATCTGGCAAGACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGAACGATATACACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp AGAACAGAAGGTAGCGAGCACAGGCGTCTAAGCACATGCCCAAGAGGAGGTGGGCACTTGACGACATCCTaGAAGGTCATAATCAGTTGG +
Preference number: 2 (lower is better)
Translates to: RTEGSEHRRLSTCPRGGGHLTTS*KVIISW
Trigger: CCAACTGATTATGACCTTTCAGGATGTCGTCAAGTG...CCCACCTCCTCTTGGGCATGTGCTTAGACGCCTGTGCTCGCTACCTTCTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTATGCCCAAGAGGAGGTaGGTATTGGCTTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPMPKRR*VLAFSS
Trigger: GGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCAT...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCACAGATTTAAGCCATTaGTCGGGTGCCACAGAGACA +
Preference number: 2 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTTDLSH*SGATET
Trigger: TGTCTCTGTGGCACCCGATCAATGGCTTAAATCTGT...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR TCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCCACTTGACGACATCCTaGAAGGTCATAATCAGTTGG +
Preference number: 2 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTHLTTS*KVIISW
Trigger: CCAACTGATTATGACCTTTCAGGATGTCGTCAAGTG...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR TCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTGTCTTGCCAGATCTaGTGCCCTTTGCATATAAAT +
Preference number: 2 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYLSCQI*CPLHIN
Trigger: ATTTATATGCAAAGGGCATCAGATCTGGCAAGACAG...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACACCATAATCCCCCTTTaGCATGAGGAAGGTAATTCT +
Preference number: 2 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYTIIPL*HEEGNS
Trigger: AGAATTACCTTCCTCATGGCAAAGGGGGATTATGGT...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCCACTTTACAACTTCATaGTGGATGCTGGTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTHFTTS*WMLVAN
Trigger: GTTTGCTACCAGCATCCAGCATGAAGTTGTAAAGTG...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp GCATCCAGGGTAGTAGCCAGGTCACTCATCAGCACAATGGTCTGTGGGTGTCTTCCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: ASRVVARSLISTMVCGCLPLELK*RIHSQQ
Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...AAGACACCCACAGACCATTGTGCTGATGAGTGACCTGGCTACTACCCTGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CCA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RNTSPYESTVLLRPAGTAHSSAQ*SVGVFL
Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCAGCACAATGGTCTGTaGGTGTCTTTCTCCTTGTAT +
Preference number: 2 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSQHNGL*VSFSLY
Trigger: ATACAAGGAGAAAGACACCCACAGACCATTGTGCTG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp AACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGACGAAGAGCGTCATaGAAAATTAACTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: NTSPYESTVLLRPAGTAPRRRAS*KINSAS
Trigger: AGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCT...TGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACAGGCGTCTAAGCACATaGCCAAGAGGAGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYRRLST*PRGGGY
Trigger: ATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCT...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp TGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACATACTTTGTAGAAATGCCAGGCTaGATCACCACACCCACAGCG +
Preference number: 2 (lower is better)
Translates to: CIHDCCSKSIHLCIFTYFVEMPG*ITTPTA
Trigger: CGCTGTGGGTGTGGTGATTCAGCCTGGCATTTCTAC...AAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTAACCATAATCCCCCTTTaGCATGAGGAAGGTAATTCT +
Preference number: 2 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVTIIPL*HEEGNS
Trigger: AGAATTACCTTCCTCATGGCAAAGGGGGATTATGGT...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACTGCTATACTGTCACGTaGCTAATCCCCACTTTACAA +
Preference number: 2 (lower is better)
Translates to: GQQISRPKTYGRNARLNHCYTVT*LIPTLQ
Trigger: TTGTAAAGTGGGGATTAGGCACGTGACAGTATAGCA...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR TCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACCTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYLQLDY*VPCVAQ
Trigger: CTGAGCTACACATGGTACTCAGTAATCTAGCTGCAG...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGAAAGCCATTGATCGGGTaGCACAGAGACAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: LQLKASLDDILKGHNQLGKPLIG*HRDRND
Trigger: ATCATTCCTGTCTCTGTGGCACCCGATCAATGGCTT...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTAATTGCATTGTCCTCCTaGTTCATGCCCCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLIALSS*FMPPPR
Trigger: CCTTGGAGGGGGCATGAAGCAGGAGGACAATGCAAT...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTACAGATTTAAGCCATTaGTCGGGTGCCACAGAGACA +
Preference number: 2 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTTDLSH*SGATET
Trigger: TGTCTCTGTGGCACCCGATCAATGGCTTAAATCTGT...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTAAGCCATTGATCGGGTaGCACAGAGACAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTKPLIG*HRDRND
Trigger: ATCATTCCTGTCTCTGTGGCACCCGATCAATGGCTT...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR CCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACGCGCAGCATAGATACTaGCCAGCTTTAGGGAAATTT +
Preference number: 2 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYAQHRY*PALGKF
Trigger: AAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGC...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACTGCTATACTGTCACGTaGCTAATCCCCACTTTACAA +
Preference number: 2 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYCYTVT*LIPTLQ
Trigger: TTGTAAAGTGGGGATTAGGCACGTGACAGTATAGCA...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACGAGGTAACTCATTGTTaGTTTAAAAAGTTGTTCAGC +
Preference number: 2 (lower is better)
Translates to: GQQISRPKTYGRNARLNHEVTHC*FKKLFS
Trigger: GCTGAACAACTTTTTAAAGCAACAATGAGTTACCTC...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACGGAAATTTCAATTATTaGATTGTCCTCCTGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GQQISRPKTYGRNARLNHGNFNY*IVLLLH
Trigger: ATGAAGCAGGAGGACAATGCAATAATTGAAATTTCC...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CCA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTAAGAGGAGGTGGGTATTaGCTTTCTCTTCCACTGACA +
Preference number: 2 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLRGGGY*LSLPLT
Trigger: TGTCAGTGGAAGAGAAAGCCAATACCCACCTCCTCT...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR CAA 90 bp ATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACATACTTaGAGACAGTGTGATAAAGCTCTTTCAGCACAGCAGTCTATTCAT +
Preference number: 2 (lower is better)
Translates to: MTAAVRASTYVSLHT*RQCDKALSAQQSIH
Trigger: ATGAATAGACTGCTGTGCTGAAAGAGCTTTATCACACTGTCTCAAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR TCA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCACTGAAAGCATCACTTaGCGACATCCTGAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LIYIVSYLSELDLVNGISTESIT*RHPERS
Trigger: TGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGT...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
3UTR-3UTR TCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACAATCATAAGTGTAAGTaGTGGCCTTCTTGTTATCAG +
Preference number: 2 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYNHKCK*WPSCYQ
Trigger: CTGATAACAAGAAGGCCATCACTTACACTTATGATT...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp GAAGATTCTTCCAGTATGTACATACGAACCAAAAGTATCAGTTTATCAGTCCCATCAGCATTTTCAAGCTaGCCCCGTATAAATGCTAAG +
Preference number: 2 (lower is better)
Translates to: EDSSSMYIRTKSISLSVPSAFSS*PRINAK
Trigger: CTTAGCATTTATACGGGGTCAGCTTGAAAATGCTGA...TGGGACTGATAAACTGATACTTTTGGTTCGTATGTACATACTGGAAGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTACAGCCAACTCTTCCCTaGTGTGTTGTACAGAAATTT +
Preference number: 2 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLQPTLP*CVVQKF
Trigger: AAATTTCTGTACAACACATCAGGGAAGAGTTGGCTG...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTAAAAGAGTACTTGAGATaGCTCAGTTGTGTGACTAAG +
Preference number: 2 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLKEYLR*LSCVTK
Trigger: CTTAGTCACACAACTGAGTCATCTCAAGTACTCTTT...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR GCA 90 bp GAAGATTCTTCCAGTATGTACATACGAACCAAAAGTATCAGTTTATCAGTCCCAGTATATCGTTCTCTGTaGATCAAAACTGCAGCTAGA +
Preference number: 2 (lower is better)
Translates to: EDSSSMYIRTKSISLSVPVYRSL*IKTAAR
Trigger: TCTAGCTGCAGTTTTGATGCACAGAGAACGATATAC...TGGGACTGATAAACTGATACTTTTGGTTCGTATGTACATACTGGAAGAATCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR TCA 90 bp GAAGATTCTTCCAGTATGTACATACGAACCAAAAGTATCAGTTTATCAGTCCCAAATGGATTTAGAGCTTaGCAGAATTTGTCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: EDSSSMYIRTKSISLSVPNGFRA*QNLSKV
Trigger: GACCTTTGACAAATTCTGTCAAGCTCTAAATCCATT...TGGGACTGATAAACTGATACTTTTGGTTCGTATGTACATACTGGAAGAATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR GCA 90 bp TGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACATACTTTTTAAATTCAAATGGGTaGTATACTGTCACGTGCCTA +
Preference number: 2 (lower is better)
Translates to: CIHDCCSKSIHLCIFTYFLNSNG*YTVTCL
Trigger: TAGGCACGTGACAGTATAGCACCCATTTGAATTTAA...AAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR GCA 72 bp AGAACAGAAGGTAGCGAGCACAGGCGTCTAAGCACATaGCCAAGAGGAGGTGGGTATTGGCTTTCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: RTEGSEHRRLST*PRGGGYWLSLP
Trigger: TGGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCTGTGCTCGCTACCTTCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR TCA 72 bp TCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTaGATCACCACACCCACAGCGCACAGGAACACCAGC +
Preference number: 3 (lower is better)
Translates to: SADQKLMVEMPG*ITTPTAHRNTS
Trigger: GCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR CCA 72 bp CTTTTTCATACATCCTTTGTGCCTGTGACGGCTGCTTaGAGAACAGAAGGTAGCGAGCACAGGCGTCTAAGC +
Preference number: 3 (lower is better)
Translates to: LFHTSFVPVTAA*RTEGSEHRRLS
Trigger: GCTTAGACGCCTGTGCTCGCTACCTTCTGTTCTCCAAGCAGCCGTCACAGGCACAAAGGATGTATGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR TCA 72 bp AATCTGCAGAGCTTTTTCATACATCCTTTGTGCCTGTaGCGGCTGCTTGGAGAACAGAAGGTAGCGAGCACA +
Preference number: 3 (lower is better)
Translates to: NLQSFFIHPLCL*RLLGEQKVAST
Trigger: TGTGCTCGCTACCTTCTGTTCTCCAAGCAGCCGTCACAGGCACAAAGGATGTATGAAAAAGCTCTGCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CAA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTGTAATTCTGGTCAGTTaGCCAGGTATTGATAAAGTA +
Preference number: 3 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPVILVS*PGIDKV
Trigger: TACTTTATCAATACCTGGCAAACTGACCAGAATTAC...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR TCA 72 bp CAGCCTGGGCTGTGTGTCCTTAAAGAGTACTTGAGATaGCTCAGTTGTGTGACTAAGGCTGCAAAGGAAGTA +
Preference number: 3 (lower is better)
Translates to: QPGLCVLKEYLR*LSCVTKAAKEV
Trigger: TACTTCCTTTGCAGCCTTAGTCACACAACTGAGTCATCTCAAGTACTCTTTAAGGACACACAGCCCAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR TCA 72 bp GCAGCTAGATTACTGAGTACCATGTGTAGCTCAGGATaGTTTATCTGTCTTGCCAGATCTGATGCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: AARLLSTMCSSG*FICLARSDALC
Trigger: GCAAAGGGCATCAGATCTGGCAAGACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CAA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACGACAGATTTAAGCCATaGATCGGGTGCCACAGAGAC +
Preference number: 3 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYDRFKP*IGCHRD
Trigger: GTCTCTGTGGCACCCGATCAATGGCTTAAATCTGTC...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR TCA 72 bp ATCGTTCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTC +
Preference number: 3 (lower is better)
Translates to: IVLCASKLQLDY*VPCVAQDDLSV
Trigger: GACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGAACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR CCA 72 bp CAGCAAATTCCTGTCTGTTCTGCGCAGCATAGATACTaGCCAGCTTTAGGGAAATTTCAATTATTGCATTGT +
Preference number: 3 (lower is better)
Translates to: QQIPVCSAQHRY*PALGKFQLLHC
Trigger: ACAATGCAATAATTGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGCAGAACAGACAGGAATTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR-3UTR CAA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTATTTCAATTATTGCATaGTCCTCCTGCTTCATGCCC +
Preference number: 3 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTISIIA*SSCFMP
Trigger: GGGCATGAAGCAGGAGGACAATGCAATAATTGAAAT...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475723.5
3UTR TCA 72 bp GCAGTGTGTACAACCCCTCCTTCACTAAGGCTAAATTaGGGAAACCTGAATATCAAAAACGACAGATTTAAG +
Preference number: 3 (lower is better)
Translates to: AVCTTPPSLRLN*GNLNIKNDRFK
Trigger: CTTAAATCTGTCGTTTTTGATATTCAGGTTTCCTCAATTTAGCCTTAGTGAAGGAGGGGTTGTACACACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR GCA 72 bp TTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTaGCTAATCCCCACTTTACAACTTCATGCTGGATGC +
Preference number: 3 (lower is better)
Translates to: FYLNSNGCYTVT*LIPTLQLHAGC
Trigger: GCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR-3UTR CAA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTAGTAGATCTCTTTTGCTaGTGTATATCGTTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLVDLFC*CISFSV
Trigger: CACAGAGAACGATATACACAAGCAAAAGAGATCTAC...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR GCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCGAACCAGGCGAGCGCTaGCAGCAGCGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTEPGER*QQRQQA
Trigger: GGCCTGCTGCCGCTGCTGGCAGCGCTCGCCTGGTTC...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACTCCCGCCGCGTCCTCTaGGCACTGCAGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYSRRVL*ALQARR
Trigger: GCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGA...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR CCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCGGCGCGACTCGGGATaGCGGCACCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSRRDSG*RHLHLG
Trigger: CCCGAGGTGCAGGTGCCGCCATCCCGAGTCGCGCCG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACGGCGCGACTCGGGATaGCGGCACCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: RNTSPYESTVLLRPAGTARRDSG*RHLHLG
Trigger: CCCGAGGTGCAGGTGCCGCCATCCCGAGTCGCGCCG...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTACAGCTGGATGATCTCTaGCTCGGCCTCGTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLQLDDL*LGLVRP
Trigger: GGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTG...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGCGGGATGGCGGCACCTaGACCTCGGGCCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMRDGGT*TSGPGP
Trigger: AGGTCCGGGGCCCGAGGTGCAGGTGCCGCCATCCCG...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTGAACCAGGCGAGCGCTaGCAGCAGCGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLEPGER*QQRQQA
Trigger: GGCCTGCTGCCGCTGCTGGCAGCGCTCGCCTGGTTC...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CCAAGTCACGTGTTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATGCCCCGTCGGCTCCCTaGTGCTCCTCCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSHVLQLKASLDDILKGHAPSAP*CSSSSA
Trigger: GGCAGAGGAGGAGGAGCAGCAGGGAGCCGACGGGGC...ATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAACACGTGACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTAGCGTCCTCTGCGCACTaGAGGCCAGACGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVASSAH*RPDALL
Trigger: CAGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGC...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR CCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGCGGCGCGACTCGGGATaGCGGCACCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMRRDSG*RHLHLG
Trigger: CCCGAGGTGCAGGTGCCGCCATCCCGAGTCGCGCCG...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR TCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAGCTTCAGCAGCTGGATaGTCTCTGCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLASAAG*SLPRPR
Trigger: ACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGC...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACTCAGGAGCCGGAACATaGTCCCGCCGCGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHSGAGT*SRRVLC
Trigger: GCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGA...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGGCCCCGTCGGCTCCCTaGTGCTCCTCCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMAPSAP*CSSSSA
Trigger: GGCAGAGGAGGAGGAGCAGCAGGGAGCCGACGGGGC...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACATCAAAGCGGCCCTGTaGATCCAGGGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYIKAAL*IQGSSQ
Trigger: CTGGCTACTACCCTGGATGCACAGGGCCGCTTTGAT...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGTCCCGCCGCGTCCTCTaGGCACTGCAGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMSRRVL*ALQARR
Trigger: GCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGA...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CCCTCCTTCACTAAGGCTAAATTGAGGAAACCTGAATATCAAAAACGACAGATTCGGGATGGCGGCACCTaGACCTCGGGCCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: PSFTKAKLRKPEYQKRQIRDGGT*TSGPGP
Trigger: AGGTCCGGGGCCCGAGGTGCAGGTGCCGCCATCCCG...AATCTGTCGTTTTTGATATTCAGGTTTCCTCAATTTAGCCTTAGTGAAGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACGAACCAGGCGAGCGCTaGCAGCAGCGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYEPGER*QQRQQA
Trigger: GGCCTGCTGCCGCTGCTGGCAGCGCTCGCCTGGTTC...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACATTGCATTGTCCTCCTaGTTCATGCCCCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYIALSS*FMPPPR
Trigger: CCTTGGAGGGGGCATGAAGCAGGAGGACAATGCAAT...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGGCGTCCTCTGCGCACTaGAGGCCAGACGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMASSAH*RPDALL
Trigger: CAGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGC...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR CCA 90 bp AACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAGCTCGCTTCAGCAGCTaGATGATCTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NTSPYESTVLLRPAGTAPARFSS*MISASA
Trigger: GGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGC...TGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTAGCTTCAGCAGCTGGATaGTCTCTGCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVASAAG*SLPRPR
Trigger: ACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGC...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGTCAGGAGCCGGAACATaGTCCCGCCGCGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMSGAGT*SRRVLC
Trigger: GCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGA...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGCAGCTGGATGATCTCTaGCTCGGCCTCGTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMQLDDL*LGLVRP
Trigger: GGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTG...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR TCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTGCTTCAGCAGCTGGATaGTCTCTGCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLASAAG*SLPRPR
Trigger: ACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGC...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR TCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCATCCTTTGTGCCTGTaGCGGCTGCTTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSHPLCL*RLLGEQ
Trigger: CTGTTCTCCAAGCAGCCGTCACAGGCACAAAGGATG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGATCAGGAGCCGGAACATaGTCCCGCCGCGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQLKASLDDILKGHNQLGSGAGT*SRRVLC
Trigger: GCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGA...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTAGCCCCGTCGGCTCCCTaGTGCTCCTCCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLAPSAP*CSSSSA
Trigger: GGCAGAGGAGGAGGAGCAGCAGGGAGCCGACGGGGC...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCCACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTHSSAQ*SVGVFL
Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTACATCCTTTGTGCCTGTaGCGGCTGCTTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVHPLCL*RLLGEQ
Trigger: CTGTTCTCCAAGCAGCCGTCACAGGCACAAAGGATG...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GCATCCAGGGTAGTAGCCAGGTCACTCATCAGCACAATGGTCTGTGGGTGTCTTAGGTCTACTTTTCTTTaGCAGCTCAGCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: ASRVVARSLISTMVCGCLRSTFL*QLSQLF
Trigger: GAAGAGTTGGCTGAGCTGTCAAAGAAAAGTAGACCT...AAGACACCCACAGACCATTGTGCTGATGAGTGACCTGGCTACTACCCTGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR TCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTACTGAAAGCATCACTTaGCGACATCCTGAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPTESIT*RHPERS
Trigger: TGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGT...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCCAACAACGAGACCATaGGCTGAGTCACTGTGGATG +
Preference number: 4 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSPTTRP*AESLWM
Trigger: CATCCACAGTGACTCAGCTCATGGTCTCGTTGTTGG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp ATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCAGTATCAAAGCGGCCCTGTaGATCCAGGGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IRWPLPSLHTTSQIYQSSIKAAL*IQGSSQ
Trigger: CTGGCTACTACCCTGGATGCACAGGGCCGCTTTGAT...ACTGGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR CCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGGCTCGCTTCAGCAGCTaGATGATCTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMARFSS*MISASA
Trigger: GGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGC...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR CCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTGCGCAGCATAGATACTaGCCAGCTTTAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPAQHRY*PALGKF
Trigger: AAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGC...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTCAGCACAATGGTCTGTaGGTGTCTTTCTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPQHNGL*VSFSLY
Trigger: ATACAAGGAGAAAGACACCCACAGACCATTGTGCTG...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTATGTGTAGCTCAGGATaGTTTATCTGTCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPMCSSG*FICLAR
Trigger: TCTGGCAAGACAGATAAATCATCCTGAGCTACACAT...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACTGTATCTTATCTCTCTaGGCTAGACTTGGTAAACGG +
Preference number: 4 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYCILSL*ARLGKR
Trigger: CCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACA...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCCAGCTGGATGATCTCTaGCTCGGCCTCGTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LIYIVSYLSELDLVNGISQLDDL*LGLVRP
Trigger: GGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTG...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTCTTTGCTTGCTTCAGTaGTTCCTGGTAGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPLCLLQ*FLVDLF
Trigger: AAAGAGATCTACCAGGAAGCACTGAAGCAAGCAAAG...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCACTTTACAACTTCATaGTGGATGCTGGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYHFTTS*WMLVAN
Trigger: GTTTGCTACCAGCATCCAGCATGAAGTTGTAAAGTG...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTGCTATACTGTCACGTaGCTAATCCCCACTTTACAA +
Preference number: 4 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTCYTVT*LIPTLQ
Trigger: TTGTAAAGTGGGGATTAGGCACGTGACAGTATAGCA...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp CCAAGTCACGTGTTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATCCTGTGACGGCTGCTTaGAGAACAGAAGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: PSHVLQLKASLDDILKGHPVTAA*RTEGSE
Trigger: CTCGCTACCTTCTGTTCTCCAAGCAGCCGTCACAGG...ATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAACACGTGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSLQLDY*VPCVAQ
Trigger: CTGAGCTACACATGGTACTCAGTAATCTAGCTGCAG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp TGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCAGTGACATCCTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WPLPSLHTTSQIYQSSDILQLDY*VPCVAQ
Trigger: CTGAGCTACACATGGTACTCAGTAATCTAGCTGCAG...GATGTCACTGGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR GCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTCCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPPLELK*RIHSQQ
Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCAAAGCCATTGATCGGGTaGCACAGAGACAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: RNTSPYESTVLLRPAGTAKPLIG*HRDRND
Trigger: ATCATTCCTGTCTCTGTGGCACCCGATCAATGGCTT...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCAAGAGGAGGTGGGTATTaGCTTTCTCTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: RNTSPYESTVLLRPAGTARGGGY*LSLPLT
Trigger: TGTCAGTGGAAGAGAAAGCCAATACCCACCTCCTCT...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTACAGCCAACTCTTCCCTaGTGTGTTGTACAGAAATTT +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLQPTLP*CVVQKF
Trigger: AAATTTCTGTACAACACATCAGGGAAGAGTTGGCTG...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACACAGATTTAAGCCATTaGTCGGGTGCCACAGAGACA +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHTDLSH*SGATET
Trigger: TGTCTCTGTGGCACCCGATCAATGGCTTAAATCTGT...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTACTGAAAGCATCACTTaGCGACATCCTGAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSTESIT*RHPERS
Trigger: TGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGT...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAATGAAAACACCCACATaGAGAGACTGTCCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLMKTPT*RDCPEN
Trigger: GTTTTCAGGACAGTCTCTTCATGTGGGTGTTTTCAT...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGATTGCATTGTCCTCCTaGTTCATGCCCCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMIALSS*FMPPPR
Trigger: CCTTGGAGGGGGCATGAAGCAGGAGGACAATGCAAT...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGAGGCGTCTAAGCACATaGCCAAGAGGAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMRRLST*PRGGGY
Trigger: ATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCT...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR GCA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTTTAAATTCAAATGGGTaGTATACTGTCACGTGCCTA +
Preference number: 4 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPLNSNG*YTVTCL
Trigger: TAGGCACGTGACAGTATAGCACCCATTTGAATTTAA...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTTAAATTCAAATGGGTaGTATACTGTCACGTGCCTA +
Preference number: 4 (lower is better)
Translates to: SHPTPTGIPTGSIFLHGTLNSNG*YTVTCL
Trigger: TAGGCACGTGACAGTATAGCACCCATTTGAATTTAA...GGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGACCTGTGACGGCTGCTTaGAGAACAGAAGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: LQLKASLDDILKGHNQLGPVTAA*RTEGSE
Trigger: CTCGCTACCTTCTGTTCTCCAAGCAGCCGTCACAGG...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACCACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHHSSAQ*SVGVFL
Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp AACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCATCAGCATTTTCAAGCTaGCCCCGTATAAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: NTSPYESTVLLRPAGTAPSAFSS*PRINAK
Trigger: CTTAGCATTTATACGGGGTCAGCTTGAAAATGCTGA...TGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACTGTCTTGCCAGATCTaGTGCCCTTTGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: RNTSPYESTVLLRPAGTALSCQI*CPLHIN
Trigger: ATTTATATGCAAAGGGCATCAGATCTGGCAAGACAG...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTGTAGAAATGCCAGGCTaGATCACCACACCCACAGCG +
Preference number: 4 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTVEMPG*ITTPTA
Trigger: CGCTGTGGGTGTGGTGATTCAGCCTGGCATTTCTAC...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTACCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLPLELK*RIHSQQ
Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAGTATATCGTTCTCTGTaGATCAAAACTGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLVYRSL*IKTAAR
Trigger: TCTAGCTGCAGTTTTGATGCACAGAGAACGATATAC...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCTTATTCGTTGGCCCTTaGCCTCCCTACATACCACTT +
Preference number: 4 (lower is better)
Translates to: FIRWPLPSLHTTSQIYQSLFVGP*PPYIPL
Trigger: AAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAA...GGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR CCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTAGCGCAGCATAGATACTaGCCAGCTTTAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVAQHRY*PALGKF
Trigger: AAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGC...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACTCAGCATTTTCAAGCTaGCCCCGTATAAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHSAFSS*PRINAK
Trigger: CTTAGCATTTATACGGGGTCAGCTTGAAAATGCTGA...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCAGTATGTGTAGCTCAGGATaGTTTATCTGTCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: IRWPLPSLHTTSQIYQSSMCSSG*FICLAR
Trigger: TCTGGCAAGACAGATAAATCATCCTGAGCTACACAT...ACTGGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR TCA 90 bp CCAAGTCACGTGTTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATCACTTGACGACATCCTaGAAGGTCATAATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSHVLQLKASLDDILKGHHLTTS*KVIISW
Trigger: CCAACTGATTATGACCTTTCAGGATGTCGTCAAGTG...ATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAACACGTGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTAGTAGAAATGCCAGGCTaGATCACCACACCCACAGCG +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLVEMPG*ITTPTA
Trigger: CGCTGTGGGTGTGGTGATTCAGCCTGGCATTTCTAC...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACATACTTTATCAAAGCGGCCCTGTaGATCCAGGGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CIHDCCSKSIHLCIFTYFIKAAL*IQGSSQ
Trigger: CTGGCTACTACCCTGGATGCACAGGGCCGCTTTGAT...AAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACCTTTGCTTGCTTCAGTaGTTCCTGGTAGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHLCLLQ*FLVDLF
Trigger: AAAGAGATCTACCAGGAAGCACTGAAGCAAGCAAAG...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACTGTATTCATGACTGCTaGAGTAAGAGCATCCACCTA +
Preference number: 4 (lower is better)
Translates to: GQQISRPKTYGRNARLNHCIHDC*SKSIHL
Trigger: TAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACATGCCCAAGAGGAGGTaGGTATTGGCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYMPKRR*VLAFSS
Trigger: GGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCAT...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR CAA 72 bp TGCTTGCTTCAGTGCTTCCTGGTAGATCTCTTTTGCTaGTGTATATCGTTCTCTGTGCATCAAAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLLQCFLVDLFC*CISFSVHQNCS
Trigger: GCTGCAGTTTTGATGCACAGAGAACGATATACACAAGCAAAAGAGATCTACCAGGAAGCACTGAAGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR TCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTTCAGCATTTTCAAGCTaGCCCCGTATAAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLSAFSS*PRINAK
Trigger: CTTAGCATTTATACGGGGTCAGCTTGAAAATGCTGA...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR TCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTATGTGTAGCTCAGGATaGTTTATCTGTCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLMCSSG*FICLAR
Trigger: TCTGGCAAGACAGATAAATCATCCTGAGCTACACAT...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR TCA 90 bp AACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAATGGATTTAGAGCTTaGCAGAATTTGTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: NTSPYESTVLLRPAGTAPNGFRA*QNLSKV
Trigger: GACCTTTGACAAATTCTGTCAAGCTCTAAATCCATT...TGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CCAAGTCACGTGTTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATATGAAGAGACTGTCCTaGAAACTCCTAGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSHVLQLKASLDDILKGHMKRLS*KLLVFP
Trigger: TGGAAACACTAGGAGTTTTCAGGACAGTCTCTTCAT...ATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAACACGTGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAGGAAATTTCAATTATTaGATTGTCCTCCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLGNFNY*IVLLLH
Trigger: ATGAAGCAGGAGGACAATGCAATAATTGAAATTTCC...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTAAGGCGTCTAAGCACATaGCCAAGAGGAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLRRLST*PRGGGY
Trigger: ATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCT...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAGTAAACGGCATTAGCTaGATGGTAAATAATATGAGA +
Preference number: 4 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLVNGIS*MVNNMR
Trigger: TCTCATATTATTTACCATGCAGCTAATGCCGTTTAC...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp ATTTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTGCTACCTACCTCTGTaGATCAAAACTGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: IYMFIRWPLPSLHTTSQICYLPL*IKTAAR
Trigger: TCTAGCTGCAGTTTTGATGCACAGAGGTAGGTAGCA...GATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR CCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACAGAGGAGGTGGGTATTaGCTTTCTCTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYRGGGY*LSLPLT
Trigger: TGTCAGTGGAAGAGAAAGCCAATACCCACCTCCTCT...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp AATTTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NLHVYSLALALPTYHFTNHSSAQ*SVGVFL
Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...ATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR TCA 90 bp CTATACTGTCACGTGCCTAATCCCCACTTTACAACTTCATGCTGGATGCTGGTAAATCATAAGTGTAAGTaGTGGCCTTCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: LYCHVPNPHFTTSCWMLVNHKCK*WPSCYQ
Trigger: CTGATAACAAGAAGGCCATCACTTACACTTATGATT...TACCAGCATCCAGCATGAAGTTGTAAAGTGGGGATTAGGCACGTGACAGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp TTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTACTGTCTTGCCAGATCTaGTGCCCTTTGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: LHVYSLALALPTYHFTNLLSCQI*CPLHIN
Trigger: ATTTATATGCAAAGGGCATCAGATCTGGCAAGACAG...TAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR GCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGAGACGAAGAGCGTCATaGAAAATTAACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMRRRAS*KINSAS
Trigger: AGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCT...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp CCCTCCTTCACTAAGGCTAAATTGAGGAAACCTGAATATCAAAAACGACAGATTAAGCCATTGATCGGGTaGCACAGAGACAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: PSFTKAKLRKPEYQKRQIKPLIG*HRDRND
Trigger: ATCATTCCTGTCTCTGTGGCACCCGATCAATGGCTT...AATCTGTCGTTTTTGATATTCAGGTTTCCTCAATTTAGCCTTAGTGAAGGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTAATGCCCAAGAGGAGGTaGGTATTGGCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLMPKRR*VLAFSS
Trigger: GGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCAT...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CCA 90 bp CTTTTAATTTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCATACATGTTTATTCGTTaGCCCTTGCCCTCCCTACAT +
Preference number: 4 (lower is better)
Translates to: LLIYMFIRWPLPSLHTTSYMFIR*PLPSLH
Trigger: ATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTA...TGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAAATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578103.1
3UTR CAA 72 bp GGAAACCTGAATATCAAAAACGACAGATTTAAGCCATaGATCGGGTGCCACAGAGACAGGAATGATAGCTAT +
Preference number: 4 (lower is better)
Translates to: GNLNIKNDRFKP*IGCHRDRNDSY
Trigger: ATAGCTATCATTCCTGTCTCTGTGGCACCCGATCAATGGCTTAAATCTGTCGTTTTTGATATTCAGGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
3UTR CAA 72 bp GCAGTAAGAGCATCCACCTATGTATCTTTACATACTTaGAGACAGTGTGATAAAGCTCTTTCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: AVRASTYVSLHT*RQCDKALSAQQ
Trigger: CTGCTGTGCTGAAAGAGCTTTATCACACTGTCTCAAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLLQLDY*VPCVAQ
Trigger: CTGAGCTACACATGGTACTCAGTAATCTAGCTGCAG...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp TCACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACAGGTCTACTTTTCTTTaGCAGCTCAGCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLFKFKWVLYCHVPNPHRSTFL*QLSQLF
Trigger: GAAGAGTTGGCTGAGCTGTCAAAGAAAAGTAGACCT...GTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTAACAGATTTAAGCCATTaGTCGGGTGCCACAGAGACA +
Preference number: 4 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLTDLSH*SGATET
Trigger: TGTCTCTGTGGCACCCGATCAATGGCTTAAATCTGT...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp ATTTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTCTGTAAAGCACTACTaGCGTAAGGTACTATCATTG +
Preference number: 4 (lower is better)
Translates to: IYMFIRWPLPSLHTTSQISVKHY*RKVLSL
Trigger: CAATGATAGTACCTTACGTCAGTAGTGCTTTACAGA...GATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR GCA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACAGACGAAGAGCGTCATaGAAAATTAACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYRRRAS*KINSAS
Trigger: AGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCT...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp ACCACTTCACAAATCTATCAATCCAGTGACATCCCTCCCTTAAAGCAAGTCAGTGTAAGGTACTATCATTaGAAGGTTTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTSQIYQSSDIPPLKQVSVRYYH*KVFSSL
Trigger: CAAGCTGGAGAAAACCTTGCAATGATAGTACCTTAC...ACTGACTTGCTTTAAGGGAGGGATGTCACTGGATTGATAGATTTGTGAAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR TCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGAATCATAAGTGTAAGTaGTGGCCTTCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMNHKCK*WPSCYQ
Trigger: CTGATAACAAGAAGGCCATCACTTACACTTATGATT...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR TCA 90 bp CCCTCCTTCACTAAGGCTAAATTGAGGAAACCTGAATATCAAAAACGACAGATTCTGTCTTGCCAGATCTaGTGCCCTTTGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: PSFTKAKLRKPEYQKRQILSCQI*CPLHIN
Trigger: ATTTATATGCAAAGGGCATCAGATCTGGCAAGACAG...AATCTGTCGTTTTTGATATTCAGGTTTCCTCAATTTAGCCTTAGTGAAGGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GAAGATTCTTCCAGTATGTACATACGAACCAAAAGTATCAGTTTATCAGTCCCACACTTGACGACATCCTaGAAGGTCATAATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: EDSSSMYIRTKSISLSVPHLTTS*KVIISW
Trigger: CCAACTGATTATGACCTTTCAGGATGTCGTCAAGTG...TGGGACTGATAAACTGATACTTTTGGTTCGTATGTACATACTGGAAGAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GAATCCCAGTGTTTCCCTAGTTTAGAGATGAAGATACTGAAATTGCAAAAGCAAAACGAGACCATGAGCTaGGTCACTGTGGATGATTTA +
Preference number: 4 (lower is better)
Translates to: ESQCFPSLEMKILKLQKQNETMS*VTVDDL
Trigger: TAAATCATCCACAGTGACTCAGCTCATGGTCTCGTT...TTGCTTTTGCAATTTCAGTATCTTCATCTCTAAACTAGGGAAACACTGGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR TCA 90 bp CGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCTGGCTCATCTTTCATAATGGCTAAGTTGGCCATCTaGAAGCAAATTACAAATTGT +
Preference number: 4 (lower is better)
Translates to: RRASCKINSASSGSSFIMAKLAI*KQITNC
Trigger: ACAATTTGTAATTTGCTTTCAGATGGCCAACTTAGC...CATTATGAAAGATGAGCCAGAAGAGGCTGAGTTAATTTTGCATGACGCTCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466729.5
CDS-3UTR GCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTGAGGTAACTCATTGTTaGTTTAAAAAGTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLEVTHC*FKKLFS
Trigger: GCTGAACAACTTTTTAAAGCAACAATGAGTTACCTC...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTGGAAATTTCAATTATTaGATTGTCCTCCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLGNFNY*IVLLLH
Trigger: ATGAAGCAGGAGGACAATGCAATAATTGAAATTTCC...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS-3UTR GCA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGAGTATATCGTTCTCTGTaGATCAAAACTGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LQLKASLDDILKGHNQLGVYRSL*IKTAAR
Trigger: TCTAGCTGCAGTTTTGATGCACAGAGAACGATATAC...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTTGCTATACTGTCACGTaGCTAATCCCCACTTTACAA +
Preference number: 4 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTCYTVT*LIPTLQ
Trigger: TTGTAAAGTGGGGATTAGGCACGTGACAGTATAGCA...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCCAGCCAACTCTTCCCTaGTGTGTTGTACAGAAATTT +
Preference number: 4 (lower is better)
Translates to: LIYIVSYLSELDLVNGISQPTLP*CVVQKF
Trigger: AAATTTCTGTACAACACATCAGGGAAGAGTTGGCTG...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR TCA 90 bp CCCTCCTTCACTAAGGCTAAATTGAGGAAACCTGAATATCAAAAACGACAGATTAAAGAGTACTTGAGATaGCTCAGTTGTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: PSFTKAKLRKPEYQKRQIKEYLR*LSCVTK
Trigger: CTTAGTCACACAACTGAGTCATCTCAAGTACTCTTT...AATCTGTCGTTTTTGATATTCAGGTTTCCTCAATTTAGCCTTAGTGAAGGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp GAATCCCAGTGTTTCCCTAGTTTAGAGATGAAGATACTGAAATTGCAAAAGCAAACCATAATCCCCCTTTaGCATGAGGAAGGTAATTCT +
Preference number: 4 (lower is better)
Translates to: ESQCFPSLEMKILKLQKQTIIPL*HEEGNS
Trigger: AGAATTACCTTCCTCATGGCAAAGGGGGATTATGGT...TTGCTTTTGCAATTTCAGTATCTTCATCTCTAAACTAGGGAAACACTGGGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCCACTTTACAACTTCATaGTGGATGCTGGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LIYIVSYLSELDLVNGISHFTTS*WMLVAN
Trigger: GTTTGCTACCAGCATCCAGCATGAAGTTGTAAAGTG...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp GACGACATCCTGAAAGGTCATAATCAGTTGGGAATGAAAGTCATTTTTCCTTTATGTATTCATGACTGCTaGAGTAAGAGCATCCACCTA +
Preference number: 4 (lower is better)
Translates to: DDILKGHNQLGMKVIFPLCIHDC*SKSIHL
Trigger: TAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA...TAAAGGAAAAATGACTTTCATTCCCAACTGATTATGACCTTTCAGGATGTCGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGAGATCAGTCCTCCTTTTaGTTCAGTACCTTATTTTAC +
Preference number: 4 (lower is better)
Translates to: LQLKASLDDILKGHNQLGDQSSF*FSTLFY
Trigger: GTAAAATAAGGTACTGAAGCAAAAGGAGGACTGATC...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR TCA 90 bp CACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACTAATGGATTTAGAGCTTaGCAGAATTTGTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: HFYLNSNGCYTVTCLIPTNGFRA*QNLSKV
Trigger: GACCTTTGACAAATTCTGTCAAGCTCTAAATCCATT...AGTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR TCA 90 bp GAATCCCAGTGTTTCCCTAGTTTAGAGATGAAGATACTGAAATTGCAAAAGCAAAAAGAGTACTTGAGATaGCTCAGTTGTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: ESQCFPSLEMKILKLQKQKEYLR*LSCVTK
Trigger: CTTAGTCACACAACTGAGTCATCTCAAGTACTCTTT...TTGCTTTTGCAATTTCAGTATCTTCATCTCTAAACTAGGGAAACACTGGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CCCTACACAAAAATGGATTTAGAGCTTGACAGAATTTGTCAAAGGTCTACTTTTAGACGAAGAGCGTCATaGAAAATTAACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PYTKMDLELDRICQRSTFRRRAS*KINSAS
Trigger: AGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCT...AAAAGTAGACCTTTGACAAATTCTGTCAAGCTCTAAATCCATTTTTGTGTAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR GCA 90 bp GAAGATTCTTCCAGTATGTACATACGAACCAAAAGTATCAGTTTATCAGTCCCACCTTTCAGTAACCCCTaGAGTTGTGAAAAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: EDSSSMYIRTKSISLSVPPFSNP*SCEKVK
Trigger: TTTTACCTTTTCACAACTGCAGGGGTTACTGAAAGG...TGGGACTGATAAACTGATACTTTTGGTTCGTATGTACATACTGGAAGAATCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp TCACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACGAGGTAACTCATTGTTaGTTTAAAAAGTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLFKFKWVLYCHVPNPHEVTHC*FKKLFS
Trigger: GCTGAACAACTTTTTAAAGCAACAATGAGTTACCTC...GTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR GCA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCGGAAATTTCAATTATTaGATTGTCCTCCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LIYIVSYLSELDLVNGISGNFNY*IVLLLH
Trigger: ATGAAGCAGGAGGACAATGCAATAATTGAAATTTCC...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
3UTR CAA 72 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTaGGTAAACGGCATTAGCTGCATGGTAAATAATATG +
Preference number: 4 (lower is better)
Translates to: LIYIVSYLSELD*VNGISCMVNNM
Trigger: CATATTATTTACCATGCAGCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR GCA 90 bp CCCTACACAAAAATGGATTTAGAGCTTGACAGAATTTGTCAAAGGTCTACTTTTGAGGTAACTCATTGTTaGTTTAAAAAGTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PYTKMDLELDRICQRSTFEVTHC*FKKLFS
Trigger: GCTGAACAACTTTTTAAAGCAACAATGAGTTACCTC...AAAAGTAGACCTTTGACAAATTCTGTCAAGCTCTAAATCCATTTTTGTGTAGGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS GCA 90 bp CCAGGCTCCAGCTCAGGAGCCGGAACATGCTCCCGCCGCGTCCTCTaGGCACTGCAGGCCAGACGCGCTCCTGGCCCCCGACCACGCGCC +
Preference number: 5 (lower is better)
Translates to: PGSSSGAGTCSRRVL*ALQARRAPGPRPRA
Trigger: GGCGCGTGGTCGGGGGCCAGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGAGCTGGAGCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466729.5
CDS CCA 90 bp GGGCGCAGGGCCCGGAGCCGCCTCACCTTGGCTCGCTTCAGCAGCTaGATGATCTCTGCCTCGGCCTCGTCCGCCCCGTCCTCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: GRRARSRLTLARFSS*MISASASSAPSSAA
Trigger: CGCTGCCGAGGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCGGGCCCTGCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS GCA 90 bp CCCGCAGGAAGCCTCGGCCCAGGCTCCAGCTCAGGAGCCGGAACATaGTCCCGCCGCGTCCTCTGCGCACTGCAGGCCAGACGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PAGSLGPGSSSGAGT*SRRVLCALQARRAP
Trigger: AGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGAGCTGGAGCCTGGGCCGAGGCTTCCTGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS CCA 90 bp AAGCGACAAGCTGGTGCTGCCTCATTTCATCCCCATCTGACAGGCTaGAACTCCACTGAATGCTGTGGGATTCCTAACGGCCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: KRQAGAASFHPHLTG*NSTECCGIPNGPFQ
Trigger: CTGGAAAGGGCCGTTAGGAATCCCACAGCATTCAGTGGAGTTCCAGCCTGTCAGATGGGGATGAAATGAGGCAGCACCAGCTTGTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS-3UTR CAA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTCGGAGCCGCCTCACCTaGGCTCGCTTCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLRSRLT*ARFSSW
Trigger: CCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCG...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS GCA 90 bp GCTGCTTGGAGAACAGAAGGTAGCGAGCACAGGCGTCTAAGCACATaGCCAAGAGGAGGTGGGTATTGGCTTTCTCTTCCACTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: AAWRTEGSEHRRLST*PRGGGYWLSLPLRR
Trigger: TCTCCTTAGTGGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCTGTGCTCGCTACCTTCTGTTCTCCAAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000481107.1
CDS GCA 90 bp GCTGCCTCATTTCATCCCCATCTGACAGGCTGGAACTCCACTGAATaGTGTGGGATTCCTAACGGCCCTTTCCAGTATATCCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: AASFHPHLTGWNSTE*CGIPNGPFQYILRT
Trigger: AGTCCTCAGGATATACTGGAAAGGGCCGTTAGGAATCCCACAGCATTCAGTGGAGTTCCAGCCTGTCAGATGGGGATGAAATGAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS-3UTR CAA 90 bp TCACTTTTATTTAAATTCAAATGGGTGCTATACTGTCACGTGCCTAATCCCCACCGGAGCCGCCTCACCTaGGCTCGCTTCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLLFKFKWVLYCHVPNPHRSRLT*ARFSSW
Trigger: CCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCG...GTGGGGATTAGGCACGTGACAGTATAGCACCCATTTGAATTTAAATAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS CCA 90 bp TGCAGATATAGGGCTAATTTACTGTGTGCTTATGAAGCGACAAGCTaGTGCTGCCTCATTTCATCCCCATCTGACAGGCTGGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: CRYRANLLCAYEATS*CCLISSPSDRLELH
Trigger: GTGGAGTTCCAGCCTGTCAGATGGGGATGAAATGAGGCAGCACCAGCTTGTCGCTTCATAAGCACACAGTAAATTAGCCCTATATCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS-3UTR CAA 90 bp AGAACAGAAGGTAGCGAGCACAGGCGTCTAAGCACATGCCCAAGAGGAGGTGGGCTCTTCCCTGATGTGTaGTACAGAAATTTCATCTTT +
Preference number: 5 (lower is better)
Translates to: RTEGSEHRRLSTCPRGGGLFPDV*YRNFIF
Trigger: AAAGATGAAATTTCTGTACAACACATCAGGGAAGAG...CCCACCTCCTCTTGGGCATGTGCTTAGACGCCTGTGCTCGCTACCTTCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475723.5
CDS-3UTR CAA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCAGACAGATTTAAGCCATaGATCGGGTGCCACAGAGAC +
Preference number: 5 (lower is better)
Translates to: RNTSPYESTVLLRPAGTADRFKP*IGCHRD
Trigger: GTCTCTGTGGCACCCGATCAATGGCTTAAATCTGTC...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTGACAGATTTAAGCCATaGATCGGGTGCCACAGAGAC +
Preference number: 5 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSDRFKP*IGCHRD
Trigger: GTCTCTGTGGCACCCGATCAATGGCTTAAATCTGTC...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp ACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCAAGTCTCTCTGAGCTAGACTaGGTAAACGGCATTAGCTGC +
Preference number: 5 (lower is better)
Translates to: TSPYESTVLLRPAGTAPSLSELD*VNGISC
Trigger: GCAGCTAATGCCGTTTACCAAGTCTAGCTCAGAGAG...ACTTGGTGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR CAA 90 bp CACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACCTGGGAAATTTCAATTATaGCATTGTCCTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: HIPPPQAYQQGQSSFMVPGKFQL*HCPPAS
Trigger: TGAAGCAGGAGGACAATGCAATAATTGAAATTTCCC...AGGTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp CTCACATCCCACCCCCACAGGCATACCAACAGGGTCAATCTTCCTTCATGGTACGTAGATCTCTTTTGCTaGTGTATATCGTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LTSHPHRHTNRVNLPSWYVDLFC*CISFSV
Trigger: CACAGAGAACGATATACACAAGCAAAAGAGATCTAC...GTACCATGAAGGAAGATTGACCCTGTTGGTATGCCTGTGGGGGTGGGATGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS TCA 90 bp GCACTGTGGTGGCAGCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTCTTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: ALWWQLCASKLQLDY*VPCVAQDDLSVLPD
Trigger: ATCTGGCAAGACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGCTGCCACCACAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470649.1
CDS-3UTR CAA 90 bp AGGAACACCAGCCCATATGAATCTACAGTTCTACTTAGACCAGCAGGGACAGCACCTGGTAGATCTCTTTaGCTTGTGTATATCGTTCTC +
Preference number: 5 (lower is better)
Translates to: RNTSPYESTVLLRPAGTAPGRSL*LVYIVL
Trigger: GAGAACGATATACACAAGCAAAAGAGATCTACCAGG...TGCTGTCCCTGCTGGTCTAAGTAGAACTGTAGATTCATATGGGCTGGTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp TTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCTTACATGTTTATTCGTaGGCCCTTGCCCTCCCTACA +
Preference number: 5 (lower is better)
Translates to: FIRWPLPSLHTTSQIYQSLHVYS*ALALPT
Trigger: TGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAA...GGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR CAA 90 bp ACCACTTCACAAATCTATCAATCCAGTGACATCCCTCCCTTAAAGCAAGTCAGTAAGGTTTTCTCCAGCTaGATGGGGTTCGACAGGCTA +
Preference number: 5 (lower is better)
Translates to: TTSQIYQSSDIPPLKQVSKVFSS*MGFDRL
Trigger: TAGCCTGTCGAACCCCATCAAGCTGGAGAAAACCTT...ACTGACTTGCTTTAAGGGAGGGATGTCACTGGATTGATAGATTTGTGAAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS TCA 90 bp GCCCTTGCCCTCCCTACATACCACTTCACAAATCTATCAATCCAGTaGCATCCCTCCCTTAAAGCAAGTCAGTTAAGTTTACATTGCTAC +
Preference number: 5 (lower is better)
Translates to: ALALPTYHFTNLSIQ*HPSLKASQLSLHCY
Trigger: GTAGCAATGTAAACTTAACTGACTTGCTTTAAGGGAGGGATGTCACTGGATTGATAGATTTGTGAAGTGGTATGTAGGGAGGGCAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000578103.1
CDS-3UTR CAA 90 bp TTACAACTGAAAGCATCACTTGACGACATCCTGAAAGGTCATAATCAGTTGGGATTCATAATGCTCAACTaGGCTCGCTTCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LQLKASLDDILKGHNQLGFIMLN*ARFSSW
Trigger: CCAGCTGCTGAAGCGAGCCAAGTTGAGCATTATGAA...TCCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGCTTTCAGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR CAA 90 bp GGGCAGCAAATCAGCAGACCAAAAACTTATGGTAGAAATGCCAGGCTGAATCACATTTCAATTATTGCATaGTCCTCCTGCTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: GQQISRPKTYGRNARLNHISIIA*SSCFMP
Trigger: GGGCATGAAGCAGGAGGACAATGCAATAATTGAAAT...GTGATTCAGCCTGGCATTTCTACCATAAGTTTTTGGTCTGCTGATTTGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp ATCACCACACCCACAGCGCACAGGAACACCAGCCCATATGAATCTACAGTTCTAGTAATTCTGGTCAGTTaGCCAGGTATTGATAAAGTA +
Preference number: 5 (lower is better)
Translates to: ITTPTAHRNTSPYESTVLVILVS*PGIDKV
Trigger: TACTTTATCAATACCTGGCAAACTGACCAGAATTAC...TAGAACTGTAGATTCATATGGGCTGGTGTTCCTGTGCGCTGTGGGTGTGGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp CTTTTAATTTACATGTTTATTCGTTGGCCCTTGCCCTCCCTACATACCACTTCATTTATTCGTTGGCCCTaGCCCTCCCTACATACCACT +
Preference number: 5 (lower is better)
Translates to: LLIYMFIRWPLPSLHTTSFIRWP*PSLHTT
Trigger: AGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAA...TGAAGTGGTATGTAGGGAGGGCAAGGGCCAACGAATAAACATGTAAATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS-3UTR CAA 90 bp TATCAGTCTGATAGGCGAGACGAAGAGCGTCATGCAAAATTAACTCAGCCTCTTATTTCAATTATTGCATaGTCCTCCTGCTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: YQSDRRDEERHAKLTQPLISIIA*SSCFMP
Trigger: GGGCATGAAGCAGGAGGACAATGCAATAATTGAAAT...AAGAGGCTGAGTTAATTTTGCATGACGCTCTTCGTCTCGCCTATCAGACTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS TCA 90 bp TACATTGCTACCTACCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTCTTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: YIATYLCASKLQLDY*VPCVAQDDLSVLPD
Trigger: ATCTGGCAAGACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGGTAGGTAGCAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000578103.1
CDS-3UTR CAA 90 bp ACCACTTCACAAATCTATCAATCCAGTGACATCCCTCCCTTAAAGCAAGTCAGTCGTAAGGTACTATCATaGCAAGGTTTTCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TTSQIYQSSDIPPLKQVSRKVLS*QGFLQL
Trigger: AAGCTGGAGAAAACCTTGCAATGATAGTACCTTACG...ACTGACTTGCTTTAAGGGAGGGATGTCACTGGATTGATAGATTTGTGAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS GCA 90 bp TCCCTTAAAGCAAGTCAGTTAAGTTTACATTGCTACCTACCTCTGTaGATCAAAACTGCAGCTAGATTACTGAGTACCATGTGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SLKASQLSLHCYLPL*IKTAARLLSTMCSS
Trigger: TGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGGTAGGTAGCAATGTAAACTTAACTGACTTGCTTTAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000578103.1
CDS-3UTR CAA 90 bp GAATCCCAGTGTTTCCCTAGTTTAGAGATGAAGATACTGAAATTGCAAAAGCAACTAATCCCTGAGGATTaGGACCTCAAGGTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: ESQCFPSLEMKILKLQKQLIPED*DLKVSG
Trigger: ACCAGAAACCTTGAGGTCCAAATCCTCAGGGATTAG...TTGCTTTTGCAATTTCAGTATCTTCATCTCTAAACTAGGGAAACACTGGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS-3UTR CAA 90 bp ACCACTTCACAAATCTATCAATCCAGTGACATCCCTCCCTTAAAGCAAGTCAGTTCAGTTAAGTTTACATaGCTACCTACCTCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: TTSQIYQSSDIPPLKQVSSVKFT*LPTSVH
Trigger: ATGCACAGAGGTAGGTAGCAATGTAAACTTAACTGA...ACTGACTTGCTTTAAGGGAGGGATGTCACTGGATTGATAGATTTGTGAAGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578103.1
CDS GCA 90 bp AAGAAAGTGTATGTTTTCAAGGTGATTCTGAAGAGAGAGCATGAATaGAGATATAGGGCTAATTTACTGTGTGCTTATGAAGCGACAAGC +
Preference number: 5 (lower is better)
Translates to: KKVYVFKVILKREHE*RYRANLLCAYEATS
Trigger: GCTTGTCGCTTCATAAGCACACAGTAAATTAGCCCTATATCTGCATTCATGCTCTCTCTTCAGAATCACCTTGAAAACATACACTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS-3UTR CAA 90 bp TGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACATACTTTATTTCAATTATTGCATaGTCCTCCTGCTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: CIHDCCSKSIHLCIFTYFISIIA*SSCFMP
Trigger: GGGCATGAAGCAGGAGGACAATGCAATAATTGAAAT...AAAGTATGTAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp GCTAAAAATGTATTCATGACTGCTGCAGTAAGAGCATCCACCTATGTATCTTTACCTGGTAGATCTCTTTaGCTTGTGTATATCGTTCTC +
Preference number: 5 (lower is better)
Translates to: AKNVFMTAAVRASTYVSLPGRSL*LVYIVL
Trigger: GAGAACGATATACACAAGCAAAAGAGATCTACCAGG...TAAAGATACATAGGTGGATGCTCTTACTGCAGCAGTCATGAATACATTTTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACCTCTTCCCTGATGTGTaGTACAGAAATTTCATCTTT +
Preference number: 5 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYLFPDV*YRNFIF
Trigger: AAAGATGAAATTTCTGTACAACACATCAGGGAAGAG...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp ATTGCAAAAGCAAAAAGGCTAGGACTAAGATCCAGGTCAGTAGTTCAGCTATACGTAATTCTGGTCAGTTaGCCAGGTATTGATAAAGTA +
Preference number: 5 (lower is better)
Translates to: IAKAKRLGLRSRSVVQLYVILVS*PGIDKV
Trigger: TACTTTATCAATACCTGGCAAACTGACCAGAATTAC...GTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCCTTTTTGCTTTTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp GAATCCCAGTGTTTCCCTAGTTTAGAGATGAAGATACTGAAATTGCAAAAGCAAGTAGATCTCTTTTGCTaGTGTATATCGTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ESQCFPSLEMKILKLQKQVDLFC*CISFSV
Trigger: CACAGAGAACGATATACACAAGCAAAAGAGATCTAC...TTGCTTTTGCAATTTCAGTATCTTCATCTCTAAACTAGGGAAACACTGGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261647.10
ENST00000475723.5
CDS-3UTR CAA 90 bp CTGATTTATATTGTATCTTATCTCTCTGAGCTAGACTTGGTAAACGGCATTAGCAGATCAGTCCTCCTTTaGCTTCAGTACCTTATTTTA +
Preference number: 5 (lower is better)
Translates to: LIYIVSYLSELDLVNGISRSVLL*LQYLIL
Trigger: TAAAATAAGGTACTGAAGCAAAAGGAGGACTGATCT...GCTAATGCCGTTTACCAAGTCTAGCTCAGAGAGATAAGATACAATATAAATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261647.10
CDS GCA 72 bp GAGCCGGAACATGCTCCCGCCGCGTCCTCTGCGCACTaGAGGCCAGACGCGCTCCTGGCCCCCGACCACGCG +
Preference number: 6 (lower is better)
Translates to: EPEHAPAASSAH*RPDALLAPDHA
Trigger: CGCGTGGTCGGGGGCCAGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGAGCATGTTCCGGCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466729.5
CDS CAA 90 bp AGGCTACCGCGCTCGGCCGGGCGCAGGGCCCGGAGCCGCCTCACCTaGGCTCGCTTCAGCAGCTGGATGATCTCTGCCTCGGCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: RLPRSAGRRARSRLT*ARFSSWMISASASS
Trigger: GGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCGGGCCCTGCGCCCGGCCGAGCGCGGTAGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS GCA 72 bp AGCTCAGGAGCCGGAACATGCTCCCGCCGCGTCCTCTaGGCACTGCAGGCCAGACGCGCTCCTGGCCCCCGA +
Preference number: 6 (lower is better)
Translates to: SSGAGTCSRRVL*ALQARRAPGPR
Trigger: TCGGGGGCCAGGAGCGCGTCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466729.5
CDS CAA 72 bp CGCTCGGCCGGGCGCAGGGCCCGGAGCCGCCTCACCTaGGCTCGCTTCAGCAGCTGGATGATCTCTGCCTCG +
Preference number: 6 (lower is better)
Translates to: RSAGRRARSRLT*ARFSSWMISAS
Trigger: CGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCGGGCCCTGCGCCCGGCCGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS GCA 72 bp AGCCTCGGCCCAGGCTCCAGCTCAGGAGCCGGAACATaGTCCCGCCGCGTCCTCTGCGCACTGCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SLGPGSSSGAGT*SRRVLCALQAR
Trigger: TCTGGCCTGCAGTGCGCAGAGGACGCGGCGGGAGCATGTTCCGGCTCCTGAGCTGGAGCCTGGGCCGAGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466729.5
ENST00000475723.5
CDS CCA 72 bp GCCCGGAGCCGCCTCACCTTGGCTCGCTTCAGCAGCTaGATGATCTCTGCCTCGGCCTCGTCCGCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: ARSRLTLARFSS*MISASASSAPS
Trigger: GGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS TCA 72 bp GGAGCCGCCTCACCTTGGCTCGCTTCAGCAGCTGGATaGTCTCTGCCTCGGCCTCGTCCGCCCCGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: GAASPWLASAAG*SLPRPRPPRPR
Trigger: CCGAGGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS GCA 72 bp CCTCACCTTGGCTCGCTTCAGCAGCTGGATGATCTCTaGCTCGGCCTCGTCCGCCCCGTCCTCGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PHLGSLQQLDDL*LGLVRPVLGSG
Trigger: GCCGCTGCCGAGGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466729.5
ENST00000475723.5
ENST00000583704.1
CDS GCA 72 bp GCTCAACTTGGCTCGCTTCAGCAGCTGGATGATCTCTaGCTCGGCCTCGTCCGCCCCGTCCTCGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: AQLGSLQQLDDL*LGLVRPVLGSG
Trigger: GCCGCTGCCGAGGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGTTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261647.10
ENST00000470399.1
ENST00000497842.6
CDS CCA 72 bp TCTTTCATAATGCTCAACTTGGCTCGCTTCAGCAGCTaGATGATCTCTGCCTCGGCCTCGTCCGCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: SFIMLNLARFSS*MISASASSAPS
Trigger: GGACGGGGCGGACGAGGCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGTTGAGCATTATGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261647.10
ENST00000470399.1
ENST00000497842.6
CDS CCA 72 bp CGAGCACAGGCGTCTAAGCACATGCCCAAGAGGAGGTaGGTATTGGCTTTCTCTTCCACTGTAATCACAGCA +
Preference number: 6 (lower is better)
Translates to: RAQASKHMPKRR*VLAFSSTVITA
Trigger: TGCTGTGATTACAGTGGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCTGTGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497842.6
CDS CAA 72 bp CAGGCGTCTAAGCACATGCCCAAGAGGAGGTGGGTATaGGCTTTCTCTTCCACTGTAATCACAGCACTTTGG +
Preference number: 6 (lower is better)
Translates to: QASKHMPKRRWV*AFSSTVITALW
Trigger: CCAAAGTGCTGTGATTACAGTGGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497842.6
CDS GCA 72 bp TTTCATCCCCATCTGACAGGCTGGAACTCCACTGAATaGTGTGGGATTCCTAACGGCCCTTTCCAGTATATC +
Preference number: 6 (lower is better)
Translates to: FHPHLTGWNSTE*CGIPNGPFQYI
Trigger: GATATACTGGAAAGGGCCGTTAGGAATCCCACAGCATTCAGTGGAGTTCCAGCCTGTCAGATGGGGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS CCA 72 bp AGGGCTAATTTACTGTGTGCTTATGAAGCGACAAGCTaGTGCTGCCTCATTTCATCCCCATCTGACAGGCTG +
Preference number: 6 (lower is better)
Translates to: RANLLCAYEATS*CCLISSPSDRL
Trigger: CAGCCTGTCAGATGGGGATGAAATGAGGCAGCACCAGCTTGTCGCTTCATAAGCACACAGTAAATTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS CAA 72 bp CAGGCGTCTAAGCACATGCCCAAGAGGAGGTGGGTATaGGCTTTCTCTTCCACTAAGGAGAAAAGAGGAATC +
Preference number: 6 (lower is better)
Translates to: QASKHMPKRRWV*AFSSTKEKRGI
Trigger: GATTCCTCTTTTCTCCTTAGTGGAAGAGAAAGCCAATACCCACCTCCTCTTGGGCATGTGCTTAGACGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000481107.1
CDS GCA 72 bp AATTTACTGTGTGCTTATGAAGCGACAAGCTGGTGCTaGCTCATTTCATCCCCATCTGACAGGCTGGAACTC +
Preference number: 6 (lower is better)
Translates to: NLLCAYEATSWC*LISSPSDRLEL
Trigger: GAGTTCCAGCCTGTCAGATGGGGATGAAATGAGGCAGCACCAGCTTGTCGCTTCATAAGCACACAGTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS TCA 72 bp AAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTaGAACCCCGTCTCTACTGACATAATGTCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: KVRRLRPSWLTW*NPVSTDIMSSA
Trigger: AGCAGAAGACATTATGTCAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497842.6
CDS TCA 72 bp TGGCAGCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTC +
Preference number: 6 (lower is better)
Translates to: WQLCASKLQLDY*VPCVAQDDLSV
Trigger: GACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470649.1
CDS CAA 72 bp ATTCCTAACGGCCCTTTCCAGTATATCCTGAGGACTTaGATGAGCCCAAGATTTCATGAATGGTGGTATGTG +
Preference number: 6 (lower is better)
Translates to: IPNGPFQYILRT*MSPRFHEWWYV
Trigger: CACATACCACCATTCATGAAATCTTGGGCTCATCAAAGTCCTCAGGATATACTGGAAAGGGCCGTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465567.1
CDS TCA 72 bp ACCTACCTCTGTGCATCAAAACTGCAGCTAGATTACTaGGTACCATGTGTAGCTCAGGATGATTTATCTGTC +
Preference number: 6 (lower is better)
Translates to: TYLCASKLQLDY*VPCVAQDDLSV
Trigger: GACAGATAAATCATCCTGAGCTACACATGGTACTCAGTAATCTAGCTGCAGTTTTGATGCACAGAGGTAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000578103.1
CDS GCA 72 bp CATCCCTCCCTTAAAGCAAGTCAGTTAAGTTTACATTaGTACCTACCTCTGTGCATCAAAACTGCAGCTAGA +
Preference number: 6 (lower is better)
Translates to: HPSLKASQLSLH*YLPLCIKTAAR
Trigger: TCTAGCTGCAGTTTTGATGCACAGAGGTAGGTAGCAATGTAAACTTAACTGACTTGCTTTAAGGGAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000578103.1
CDS TCA 72 bp AATGGGACCCACATGTCACTTAGGGAACAATGTAGGTaGATTAACATCCAGTTAAATGACCTATTCCAGACT +
Preference number: 6 (lower is better)
Translates to: NGTHMSLREQCR*INIQLNDLFQT
Trigger: AGTCTGGAATAGGTCATTTAACTGGATGTTAATTCACCTACATTGTTCCCTAAGTGACATGTGGGTCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465567.1
ENST00000481107.1