RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC16 (Homo sapiens)

Ensembl gene IDs: ENSG00000167094

Ensembl transcript IDs: ENST00000373289.4, ENST00000488285.1, ENST00000489226.5

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTGGAAGGAGGCAGCTaGCTGAGTGCCAGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRLEGGS*LSASVG
Trigger: CCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAG...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
3UTR-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCCAGTGTGGGGAGGTaGGTAGAACTCGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIASVGR*VELVPS
Trigger: GGAGGGGACGAGTTCTACCCACCTCCCCACACTGGC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373289.4
3UTR CAA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTaGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: KENKYNKLSCGTRGL*LRLLIALEGGSWLS
Trigger: ACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
3UTR GCA 72 bp CTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTaGTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LWDQRTVAKTFN*SGRRQLAECQC
Trigger: ACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGGGCACCCTCAGCCTTaGTGGACCTCTGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVEGHPQP*WTSGPG
Trigger: GCCAGGGCCAGAGGTCCAGCAAGGCTGAGGGTGCCC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGAAGTCCACCAGCTGTaGGTCCAGGTGGAGTGCGCG +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVEEVHQL*VQVECA
Trigger: CGCGCACTCCACCTGGACCCACAGCTGGTGGACTTC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGCCAGTGTGGGGAGGTaGGTAGAACTCGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVEASVGR*VELVPS
Trigger: GGAGGGGACGAGTTCTACCCACCTCCCCACACTGGC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTTGGCGCCCTCGTCCTaGGGGCTCAGCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLLAPSS*GLSASA
Trigger: GGCGCTGGCGCTGAGCCCTCAGGACGAGGGCGCCAA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAATGTCACGGCGGTGGCTaGGGTGCTCCTGTATTCCTG +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVECHGGG*GAPVFL
Trigger: CAGGAATACAGGAGCACCTCAGCCACCGCCGTGACA...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGGGGGTTGTGCCGGATaGCCGTGGAGAAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVEGGCAG*PWRSGS
Trigger: AGAACCACTTCTCCACGGCCATCCGGCACAACCCCC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCGGCCACGAGCAGCCTTaGCCTTTCTGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSAGHEQP*PFWASA
Trigger: GGCAGAGGCCCAGAAAGGTCAAGGCTGCTCGTGGCC...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAAGGGACAGCTTTGGTTaGTTGGGGTTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVERDSFG*LGLRSR
Trigger: CCTGCTCCTCAACCCCAAGCAACCAAAGCTGTCCCT...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTGTGGGCTGCCGGCCTaGAGGCTGCCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLCGLPA*RLPSTI
Trigger: GATGGTGGAGGGCAGCCTGCAGGCCGGCAGCCCACA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAAGACATCGGCGTTGGTaGTGTCCTGCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVERHRRW*CPASAR
Trigger: ACGAGCTGAAGCAGGACACCACCAACGCCGATGTCT...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGCGTGAGGCAGGCCTaGTGCTGCTTGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLSVRQA*CCLRAR
Trigger: CCTGGCCCTCAAGCAGCATCAGGCCTGCCTCACGCT...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTCTCCCCCTGCTTCCATaGGTGCTGCAGGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLALPLLP*VLQGQG
Trigger: GCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAG...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTCTGCCCTCCACCATCTaGTCCAGCTGCAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLALPSTI*SSCSLA
Trigger: GGCCAGGCTGCAGCTGGAGCAGATGGTGGAGGGCAG...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGGAAGAGGAAGAGACTaGGGTCCAGAGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IALEGGSWLSASVGRWVEGRGRD*GPEGCS
Trigger: AGAACAACCCTCTGGACCCCAGTCTCTTCCTCTTCC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGCCTTGGGCCCTGGGTaGCCTCAATCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAALGPG*PQSRWS
Trigger: GCTCCAGCGAGATTGAGGCCACCCAGGGCCCAAGGC...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCTCCTGCCTTGGGCCCTaGGTGGCCTCAATCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSASCLGP*VASISL
Trigger: CAGCGAGATTGAGGCCACCCAGGGCCCAAGGCAGGA...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGGTGCGTGCTGCAGCTTaGCCTGCACAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRVRAAA*PAQPGS
Trigger: GGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCAC...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGGGTGGTCTTGGTCTTaGTGGGCTCCTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAGWSWS*WAPALG
Trigger: GCCCAAGGCAGGAGCCCAGCAAGACCAAGACCACCC...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGGGTGGCATCAACCTTaGTGGGTCTCCAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLGWHQP*WVSSSG
Trigger: GCCGGAGCTGGAGACCCAGCAAGGTTGATGCCACCC...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTTTCGGAGCAGTCCCCTaGTTCGGCCCTGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAFGAVP*FGPGWH
Trigger: ATGCCACCCAGGGCCGAAGCAGGGGACTGCTCCGAA...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTCATGCCCTGGCTCTTaGCCTGGGCACCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLSCPGS*PGHPQP
Trigger: AGGCTGAGGGTGCCCAGGGCAAGAGCCAGGGCATGA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTAGCTGTGGGTCCAGGTaGAGTGCGCGGGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLASCGSR*SAREKS
Trigger: GCTCTTCTCCCGCGCACTCCACCTGGACCCACAGCT...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGTCTGGGCCTCTGCCTTaGGCTCCGGGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRSGPLP*APGGLG
Trigger: ACCAAGACCACCCGGAGCCCAAGGCAGAGGCCCAGA...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGCCCCTGCTTCGGCCCTaGGTGGCATCAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLPLLRP*VASTLL
Trigger: CAGCAAGGTTGATGCCACCCAGGGCCGAAGCAGGGG...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGGCCTTGCTGGACCTCTaGCCCTGGCCTTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRALLDL*PWPWAY
Trigger: GTATGCCCAAGGCCAGGGCCAGAGGTCCAGCAAGGC...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGCGTCCGAATCTGTCATaGGGCCCCTTCCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLRPNLS*GPFQED
Trigger: GTCCTCCTGGAAGGGGCCTCATGACAGATTCGGACG...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGCTTTGGGATGTCCCGTaGGGGGCCCTGGTCAACCTT +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLLWDVP*GALVNL
Trigger: AAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAG...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTTCTCGATGGCACGGTTaGTCCGCTGCAGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLASRWHG*SAAVRA
Trigger: AGCACGCACTGCAGCGGATCAACCGTGCCATCGAGA...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCCAGGAAGTCCTCCACTaGCCCATCGAACTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSAQEVLH*PIELLE
Trigger: CTCCAGGAGTTCGATGGGGCAGTGGAGGACTTCCTG...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTCGGCGGTGGCTGAGGTaGTCCTGTATTCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLARRWLR*SCIPGR
Trigger: TCTGCCAGGAATACAGGAGCACCTCAGCCACCGCCG...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTGGCCTGCGGGTGCTTaGGATTCAACAGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLWPAGA*DSTARR
Trigger: GCGCCTTGCTGTTGAATCCCAAGCACCCGCAGGCCA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTCTGGAGCAGCATCCTaGCCTGCGGGTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLSGAAS*PAGAWD
Trigger: ATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGGGAGCCGTCGGTACATaGTGCCCCGGAAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLGAVGT*CPGRGR
Trigger: TCTTCCTCTTCCGGGGCACCATGTACCGACGGCTCC...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGCCTTGGGCTCCGGGTaGTCTTGGTCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRALGSG*SWSCWA
Trigger: AGCCCAGCAAGACCAAGACCACCCGGAGCCCAAGGC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGTGCTTCGGCCCTGGGTaGCATCAACCTTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLCFGPG*HQPCWV
Trigger: GACCCAGCAAGGTTGATGCCACCCAGGGCCGAAGCA...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAACCTCAGTTTTGCTaGGACTTGGGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRQPQFC*DLGWVP
Trigger: GGGGACCCAGCCCAAGTCTCAGCAAAACTGAGGTTG...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGCCTGCAGCAGGCCCATaGGCGTGTTGGCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALPAAGP*ACWRPR
Trigger: ACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGG...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTGCTTCCATGAGTGCTaGAGGGCCAAGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLCFHEC*RAKAFW
Trigger: CCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGTGGAAGTTGAGCTCATaGCCTGGCTCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRWKLSS*PGSCPG
Trigger: CCCAGGGCAAGAGCCAGGGCATGAGCTCAACTTCCA...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGCAGGATCCCTTTaGGGGCTGGAATCACCCATG +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLAAGSL*GLESPM
Trigger: CATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGC...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGCCCCATCGAACTCCTaGAGCCGTCGGTACATGGTG +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRAPSNS*SRRYMV
Trigger: CACCATGTACCGACGGCTCCAGGAGTTCGATGGGGC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGCGCACCATGTCCTCCTaGTCCTCGGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRRTMSS*SSVTMS
Trigger: GGACATGGTGACCGAGGACCAGGAGGACATGGTGCG...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCTGGTCCCAAAGATGTaGTGCAGGATCCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRLVPKM*CRIPLG
Trigger: CCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAG...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTAACTGCTTGCGCCTCTaGTCGCAGAAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLANCLRL*SQKPIF
Trigger: GAAGATGGGCTTCTGCGAGCAGAGGCGCAAGCAGTT...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGTGGCGCTCCAACTCGTaGCGTTTAAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRWRSNS*RLSIPT
Trigger: TGTGGGGATGCTTAAACGGCACGAGTTGGAGCGCCA...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCCCAGAGTCCGAGGATTaGGTCTTCAACAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSAPESED*VFNSDE
Trigger: CTCGTCACTGTTGAAGACGCAATCCTCGGACTCTGG...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAGGCCCATGCGCGTGTTaGCGCCCTCGTCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRGPCAC*RPRPEG
Trigger: GCCCTCAGGACGAGGGCGCCAACACGCGCATGGGCC...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCATGGCCGTGGAGAAGTaGTTCTCTGCCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSAMAVEK*FSAFWN
Trigger: GTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCAT...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGACAGTGGCCACATCCTaGCGGGCCCCAAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRTVATS*RAPKMF
Trigger: GAACATTTTTGGGGCCCGCCAGGATGTGGCCACTGT...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCTCTGGCCCTGGCCTTaGGCATACTCAGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRLWPWP*AYSVLL
Trigger: CAGCAAAACTGAGTATGCCCAAGGCCAGGGCCAGAG...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGGAGCTCAGCAGCATGTaGGAAGACATTCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLELSSM*EDIQGI
Trigger: GATGCCCTGAATGTCTTCTCACATGCTGCTGAGCTC...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGAGGCCTGATGCTGCTTaGGGGCCAGGAGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALRPDAA*GPGDRP
Trigger: TGGCCTGTCTCCTGGCCCTCAAGCAGCATCAGGCCT...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGCGTTGGTGGTGTCCTaGTTCAGCTCGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRALVVS*FSSLVM
Trigger: CATCACCAACGAGCTGAAGCAGGACACCACCAACGC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGCATCTTGGCGCGCCTaGTGGGCCTGGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLASWRA*WAWATI
Trigger: GATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGTCTTGCTGGGCTCCTaGCTTGGGCCCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLVLLGS*LGPWVA
Trigger: GGCCACCCAGGGCCCAAGGCAGGAGCCCAGCAAGAC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGTGGACTCGGCCTTaGTGGAAGTTGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRRWTRP*WKLSSC
Trigger: GCATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCT...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCATGGTTTCTCAGGCTaGAGCTCAGCAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRHGFSG*SSAACE
Trigger: CTCACATGCTGCTGAGCTCCAGCCTGAGAAACCATG...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGCTGGAAGGAGGCAGCTaGCTGAGTGCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALLEGGS*LSASVG
Trigger: CCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAG...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGCAGCTTCATAGTAGGTaGGGTCCTGATCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLQLHSR*GPDQPQ
Trigger: CTGAGGTTGATCAGGACCTCACCTACTATGAAGCTG...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACGCTGCAGTGCGTGCTaGAGCTTGCCCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLRCSAC*SLPCTA
Trigger: GGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGCACGGTTGATCCGCTaGAGTGCGTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALARLIR*SACCSL
Trigger: CAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGC...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGGGTGGCCTTGGTCTTaGTGGAGTTCCTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRGWPWS*WSSSCV
Trigger: TACACAAGAGGAACTCCAGCAAGACCAAGGCCACCC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTTTGGAACACGTGGCTaGTCCCAAAGATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLFGTRG*SQRCAA
Trigger: TGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGACATCACAGATGCTTTaGAACACGTGGCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRTSQML*NTWLVP
Trigger: TGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGT...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGTCGGTAACGGAAGCATaGTTTCTCAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRSVTEA*FLRLEL
Trigger: GAGCTCCAGCCTGAGAAACCATGCTTCCGTTACCGA...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTAGGATCCCCGCATCTTaGCGCGCCTGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIRIPAS*RACWAW
Trigger: CCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAGCTCCAGCTGCAGCCTaGCCAGGTGGGCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRAPAAA*PGGLSG
Trigger: CCCAGATAGCCCACCTGGCCAGGCTGCAGCTGGAGC...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGAGAAAGCCTCAGTCTTaGTGGAACTTCGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRRKPQS*WNFGAV
Trigger: GACTGCTCCGAAGTTCCACCAAGACTGAGGCTTTCT...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGCTCAGCCTCTCCCTCTaGGCTTCCCGGTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALLSLSL*ASRFYL
Trigger: CAGGTAAAACCGGGAAGCTCAGAGGGAGAGGCTGAG...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGTTGCGTCTTCAACAGTaGCGAGTCAGAGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLLRLQQ*RVRECH
Trigger: GTGACATTCTCTGACTCGTCACTGTTGAAGACGCAA...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTTGGGTCCAGGTGGAGTaGGCGGGAGAAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAWVQVE*AGEEQH
Trigger: GTGCTGCTCTTCTCCCGCGCACTCCACCTGGACCCA...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGTCCAGGAAGGCACACTaGTCAAAAAGGCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRSRKAH*SKRHCP
Trigger: GGGACAATGCCTTTTTGAGCAGTGTGCCTTCCTGGA...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTAGCTGGCGCTGTGCCTaGCGCACCATGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLISWRCA*RTMSSW
Trigger: CCAGGAGGACATGGTGCGGCAGGCACAGCGCCAGCT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGCCTTCTGGGGGTTGTaGCGGATGGCCGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLAFWGL*RMAVEK
Trigger: CTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAACCTTTCTGGGCCTCTaGCTTGGGCTCCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRTFLGL*LGLRVV
Trigger: GACCACCCGGAGCCCAAGGCAGAGGCCCAGAAAGGT...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCGCTAAGACTTTTAATTaGTCTGGAAGGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLLLRLLIALEGGSWLSAAKTFN*SGRRQL
Trigger: CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGC...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTATCCCGTGAGGGGCCCTaGTCAACCTTCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLSREGP*STFRAS
Trigger: GGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGA...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTGCCCTTCGCAGGTTCTaGGCGGCCGAGGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAALRRF*AAEEKS
Trigger: TGACTTCTCCTCGGCCGCCCAGAACCTGCGAAGGGC...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTTCTTGGCGCGCCTGCTaGGCCTGGGCCACCATCTTC +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLISWRAC*AWATIF
Trigger: GAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGA...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGGGCCAAGGCCTTCTaGCGCTCCAACTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLRAKAF*RSNSCR
Trigger: ACGGCACGAGTTGGAGCGCCAGAAGGCCTTGGCCCT...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGCGGAATCTCAGGGGTaGCCTTCAGCTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLAESQG*PSAPRR
Trigger: CCTCCGAGGAGCTGAAGGCCACCCCTGAGATTCCGC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGTGCTCCTGTATTCCTaGCAGATAGCCGACATCTCA +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRVLLYS*QIADIS
Trigger: TGAGATGTCGGCTATCTGCCAGGAATACAGGAGCAC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGGCTCCGGGTGGTCTTaGTCTTGCTGGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIGSGWS*SCWAPA
Trigger: GGCAGGAGCCCAGCAAGACCAAGACCACCCGGAGCC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAGTTGAGCTCATGCCCTaGCTCTTGCCCTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRVELMP*LLPWAP
Trigger: GGGTGCCCAGGGCAAGAGCCAGGGCATGAGCTCAAC...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGGCACTGTTAACCCTGTaGCCTTTGGTTTTACATCAC +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRALLTL*PLVLHH
Trigger: GTGATGTAAAACCAAAGGTCACAGGGTTAACAGTGC...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGGTAGAGCACAAAGGTaGGGCGCTCCAGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLGRAQR*GAPGAC
Trigger: GCAAGCACCTGGAGCGCCTCACCTTTGTGCTCTACC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTGGCCCTGGGTGGCCTTaGTTTTTCTGGGACCATGGC +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAGPGWP*FFWDHG
Trigger: GCCATGGTCCCAGAAAAATCAAGGCCACCCAGGGCC...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGGTTTTACATCACAGATaGTTTGGAACACGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRVLHHR*FGTRGW
Trigger: CCAGCCACGTGTTCCAAAGCATCTGTGATGTAAAAC...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTTGCTGCAGCTTGCCCTaGACAGCCAGGATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLICCSLP*TARIPA
Trigger: TGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCA...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGTCCTTTCTCCTGCTaGTCGTCCCGGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLSPFSC*SSRRAL
Trigger: CAAGGCCCTCCGGGACGAGCAGCAGGAGAAAGGACT...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACCTCCTCCACCGACATaGCCGGGAAGAGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLPPPPT*PGRGWS
Trigger: TGACCAACCTCTTCCCGGGCATGTCGGTGGAGGAGG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAAAGTTGTAGAGTCTaGCCCGGAAGATGTAGACAT +
Preference number: 4 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAESCRV*PGRCRH
Trigger: ATGTCTACATCTTCCGGGCCAGACTCTACAACTTTC...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTTGGGCCACCATCTTCTaGAGCAGCATCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAWATIF*SSILAC
Trigger: GCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCA...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTGCCAGGTTGCCCAGCTaGAAGAAGCAATCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAARLPS*KKQSPR
Trigger: CCGAGGCGATTGCTTCTTCCAGCTGGGCAACCTGGC...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGCCAGGTGGGCTATCTaGGTGCTAAGCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLARWAI*VLSTSS
Trigger: GGAGGAGGTGCTTAGCACCCAGATAGCCCACCTGGC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGATGGTCTTGGTCTTGCTaGGCTCCTGCCTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRWSWSC*APALGP
Trigger: AGGGCCCAAGGCAGGAGCCCAGCAAGACCAAGACCA...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTAGGTGCCTGTGGTCCTaGAGCTCATGCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIRCLWS*SSCWRL
Trigger: CAGCCTCCAGCATGAGCTTCAGGACCACAGGCACCT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGCATACTCAGTTTTGCTaGGGCTCCAGTTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRHTQFC*GSSLSH
Trigger: ATGACTCAAACTGGAGCCTCAGCAAAACTGAGTATG...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGGCCTTGCTGGAAGTTaGGCTCATGCCCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLGLAGS*AHALAL
Trigger: AAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGTCTCCCAGTCTGCCTaGTCCAAGCACTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIVSQSA*SKHCWP
Trigger: AGGCCAGCAGTGCTTGGAGCAGGCAGACTGGGAGAC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGTGAGGCGCTCCAGGTaGTTGCAGTTGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLVRRSR*LQLSCC
Trigger: ACAGCAGGACAACTGCAAGCACCTGGAGCGCCTCAC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGTTGATCCGCTGCAGTaGGTGCTGCAGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIVDPLQ*VLQLAL
Trigger: CAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAAC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTATGTTCTGCAGCAGCTaGCGGCTCTTGGCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIMFCSS*RLLARY
Trigger: GTACCGGGCCAAGAGCCGGCAGCTGCTGCAGAACAT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACTTCCCGGTTTTACCTaGGGAATCTCAGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLLPGFT*GISGVA
Trigger: GGCCACCCCTGAGATTCCGCAGGTAAAACCGGGAAG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTTGTGCCGGATGGCCGTaGAGAAGTGGTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIACAGWP*RSGSLP
Trigger: AGGCAGAGAACCACTTCTCCACGGCCATCCGGCACA...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCAGCTGCCGGCTCTTaGCCCGGTACAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIAAAGS*PGTGST
Trigger: AGTACTACCTGTACCGGGCCAAGAGCCGGCAGCTGC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGACCTCTGGCCCTaGCCTTGGGCATACTCAGTT +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIALDLWP*PWAYSV
Trigger: AACTGAGTATGCCCAAGGCCAGGGCCAGAGGTCCAG...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACGACATCTCAGTCTCTaGGGTGCCTGTGGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLRHLSL*GACGPE
Trigger: TTCAGGACCACAGGCACCTCAGAGACTGAGATGTCG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAGTCCCAAAGATGTGCTaGAGGATCCCTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRVPKMC*RIPLGA
Trigger: AGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGAC...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAATCCTGGCCTGCGGGTaGTTGGGATTCAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLILACG*LGFNSK
Trigger: CTTGCTGTTGAATCCCAAGCACCCGCAGGCCAGGAT...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAGCCCCAAAAATGTTCTaGAGCAGCTGCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLAPKMF*SSCRLL
Trigger: CAAGAGCCGGCAGCTGCTGCAGAACATTTTTGGGGC...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGATGGTTCTCTGCCTTCTaGAACTGCTTGCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRWFSAF*NCLRLC
Trigger: GCAGAGGCGCAAGCAGTTCCAGAAGGCAGAGAACCA...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCAGCAGGGACAGCTTTaGTTGCTTGGGGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAQQGQL*LLGVEE
Trigger: CTCCTCAACCCCAAGCAACCAAAGCTGTCCCTGCTG...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAAAGCCTCAGTCTTGGTaGAACTTCGGAGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRKPQSW*NFGAVP
Trigger: GGGGACTGCTCCGAAGTTCCACCAAGACTGAGGCTT...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGATGGACTCGGCCTTGCTaGAAGTTGAGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRWTRPC*KLSSCP
Trigger: AGGGCATGAGCTCAACTTCCAGCAAGGCCGAGTCCA...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACAAGAAGGGAGGGTCTaGATGGTCCCTTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLQEGRV*MVPSDS
Trigger: GCTGTCTGAAGGGACCATCCAGACCCTCCCTTCTTG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR GCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTATCAAAGGCTCCCCCTaGTTCCATGAGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIIKGSP*FHECCR
Trigger: CCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGAT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTAGAATGTCACGGCGGTaGCTGAGGTGCTCCTGTATT +
Preference number: 4 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIARMSRR*LRCSCI
Trigger: AATACAGGAGCACCTCAGCCACCGCCGTGACATTCT...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
3UTR CAA 72 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTaGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGL*LRLLIALEGGS
Trigger: GCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAAGCAATCGCCTCGGTTaGTGTAGAGTCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRSNRLG*CRVLSP
Trigger: AGGAGAAAGGACTCTACATCAACCGAGGCGATTGCT...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGAATGCTTTGGAACACGTaGCTGGTCCCAAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: KENKYNKLSCGTRGLLLRMLWNT*LVPKMC
Trigger: GCACATCTTTGGGACCAGCCACGTGTTCCAAAGCAT...TCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTTGTAGACATCGGCGTTaGTGGTGTCCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLICRHRR*WCPASA
Trigger: AGCTGAAGCAGGACACCACCAACGCCGATGTCTACA...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTAAGGGAGGGTCTGGATaGTCCCTTCAGACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIKGGSG*SLQTAS
Trigger: TGAAGCTGTCTGAAGGGACCATCCAGACCCTCCCTT...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR TCA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTGAGGCTCCAGTTTaGGTCATAGAAAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIAEAPV*VIESLS
Trigger: ACTGAGGCTTTCTATGACTCAAACTGGAGCCTCAGC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CCA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAATTTTTCTGGGACCATaGCTTAGTGCCTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLIFLGP*LSASLL
Trigger: CAACAGGGAGGCACTAAGCCATGGTCCCAGAAAAAT...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 90 bp AGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTGGCGCGCCTGCTaGGCCTGGGCCACCATCTTCTGGAGCAGCATCCTGGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: SLPCTARIPASWRAC*AWATIFWSSILACG
Trigger: CCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp TGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTGGCGCGCCTaGTGGGCCTGGGCCACCATCTTCTGGAGCAGCATCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CSLPCTARIPASWRA*WAWATIFWSSILAC
Trigger: GCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp TCGATGGCACGGTTGATCCGCTGCAGTGCGTGCTGCAGCTTGCCCTaGACAGCCAGGATCCCCGCATCTTGGCGCGCCTGCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SMARLIRCSACCSLP*TARIPASWRACWAW
Trigger: CCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp TGTGGGCTGCCGGCCTGCAGGCTGCCCTCCACCATCTGCTCCAGCTaGAGCCTGGCCAGGTGGGCTATCTGGGTGCTAAGCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CGLPACRLPSTICSS*SLARWAIWVLSTSS
Trigger: GGAGGAGGTGCTTAGCACCCAGATAGCCCACCTGGCCAGGCTGCAGCTGGAGCAGATGGTGGAGGGCAGCCTGCAGGCCGGCAGCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp GCTCGCAGAAGCCCATCTTCTCCTGCAGCAGGCCCATGCGCGTGTTaGCGCCCTCGTCCTGAGGGCTCAGCGCCAGCGCCTGCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: ARRSPSSPAAGPCAC*RPRPEGSAPAPAGS
Trigger: ACTACCAGCAGGCGCTGGCGCTGAGCCCTCAGGACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGGAGAAGATGGGCTTCTGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS GCA 90 bp TCAGCGCCAGCGCCTGCTGGTAGTCCGCCTCGGCAAAGGCCAGGTTaGCCAGCTGGAAGAAGCAATCTAGGGTCCGGAGGCGGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SAPAPAGSPPRQRPG*PAGRSNLGSGGGGE
Trigger: CTCACCCCCGCCTCCGGACCCTAGATTGCTTCTTCCAGCTGGGCAACCTGGCCTTTGCCGAGGCGGACTACCAGCAGGCGCTGGCGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488285.1
CDS GCA 90 bp GACTCCACTGGCCTGCATCCTTCAGCCCTGGGCTGGGGTACGCTGTaGCCCAGACCCCAAGGGCTCCGAGCCCTGGCCTGTACTCCACTT +
Preference number: 5 (lower is better)
Translates to: DSTGLHPSALGWGTL*PRPQGLRALACTPL
Trigger: AAGTGGAGTACAGGCCAGGGCTCGGAGCCCTTGGGGTCTGGGGCACAGCGTACCCCAGCCCAGGGCTGAAGGATGCAGGCCAGTGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp GGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTGGAGCAGCATCCTaGCCTGCGGGTGCTTGGGATTCAACAGCAAGGCGCTGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GAPAGPGPPSSGAAS*PAGAWDSTARRCAG
Trigger: ACCTGCACAGCGCCTTGCTGTTGAATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp AGTGCGTGCTGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTaGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTGGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: SACCSLPCTARIPAS*RACWAWATIFWSSI
Trigger: GATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp GGTCTCCAGCTCCGGCCACGAGCAGCCTTGACCTTTCTGGGCCTCTaGCTTGGGCTCCGGGTGGTCTTGGTCTTGCTGGGCTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: GLQLRPRAALTFLGL*LGLRVVLVLLGSCL
Trigger: AAGGCAGGAGCCCAGCAAGACCAAGACCACCCGGAGCCCAAGGCAGAGGCCCAGAAAGGTCAAGGCTGCTCGTGGCCGGAGCTGGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 90 bp GGGCCGAACGCACACCTAGGCCAGCGGTCTTCGACCCCTGAGCTTTaGCTACCCTGCTGCCTTAGCTTCCTGAGGCCTGGCGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: GPNAHLGQRSSTPEL*LPCCLSFLRPGGST
Trigger: GGTGCTTCCGCCAGGCCTCAGGAAGCTAAGGCAGCAGGGTAGTCAAAGCTCAGGGGTCGAAGACCGCTGGCCTAGGTGTGCGTTCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 90 bp AGAGGGTTGTTCTCGATGGCACGGTTGATCCGCTGCAGTGCGTGCTaGAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: RGLFSMARLIRCSAC*SLPCTARIPASWRA
Trigger: GGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp GGGGTGGCCTTCAGCTCCTCGGAGGTCGCAATCAAAGGCTCCCCCTaGTTCCATGAGTGCTGCAGGGCCAAGGCCTTCTGGCGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GVAFSSSEVAIKGSP*FHECCRAKAFWRSN
Trigger: GTTGGAGCGCCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGAGCTGAAGGCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp ATCCCCGCATCTTGGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTaGAGCAGCATCCTGGCCTGCGGGTGCTTGGGATTCAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: IPASWRACWAWATIF*SSILACGCLGFNSK
Trigger: CTTGCTGTTGAATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 90 bp CTTCAGCTCCTCGGAGGTCGCAATCAAAGGCTCCCCCTGCTTCCATaGGTGCTGCAGGGCCAAGGCCTTCTGGCGCTCCAACTCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LQLLGGRNQRLPLLP*VLQGQGLLALQLVP
Trigger: CGGCACGAGTTGGAGCGCCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGAGCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp GGGGTCCAGAGGGTTGTTCTCGATGGCACGGTTGATCCGCTGCAGTaGGTGCTGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTG +
Preference number: 5 (lower is better)
Translates to: GVQRVVLDGTVDPLQ*VLQLALHSQDPRIL
Trigger: CAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCTGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp AGACTGGGGTCCAGAGGGTTGTTCTCGATGGCACGGTTGATCCGCTaGAGTGCGTGCTGCAGCTTGCCCTGCACAGCCAGGATCCCCGCA +
Preference number: 5 (lower is better)
Translates to: RLGSRGLFSMARLIR*SACCSLPCTARIPA
Trigger: TGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCTGGACCCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp AAGGCGCTAAATGCACCCACACCCCGGCTTCCCCCGCACTGTGTCTaGCCTGTCTCCTGGCTGTGGGTCACCTGGGAGCCTTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KALNAPTPRLPPHCV*PVSWLWVTWEPSSC
Trigger: ACAGGAAGAAGGCTCCCAGGTGACCCACAGCCAGGAGACAGGGCAGACACAGTGCGGGGGAAGCCGGGGTGTGGGTGCATTTAGCGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp TGGCCCGGTACAGGTAGTACTGGGCCTTCTGGGGGTTGTGCCGGATaGCCGTGGAGAAGTGGTTCTCTGCCTTCTGGAACTGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: WPGTGSTGPSGGCAG*PWRSGSLPSGTAAS
Trigger: CGAGGCGGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACCTGTACCGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp GCACCCACACCCCGGCTTCCCCCGCACTGTGTCTGCCCTGTCTCCTaGCTGTGGGTCACCTGGGAGCCTTCTTCCTGTTGGAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: APTPRLPPHCVCPVS*LWVTWEPSSCWSLE
Trigger: TTCTAAGCTCCAACAGGAAGAAGGCTCCCAGGTGACCCACAGCCAGGAGACAGGGCAGACACAGTGCGGGGGAAGCCGGGGTGTGGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAAGGGCTCCGGGTGGTCTaGGTCTTGCTGGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IALEGGSWLSASVGRWVEGLRVV*VLLGSC
Trigger: GCAGGAGCCCAGCAAGACCAAGACCACCCGGAGCCC...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAACTCATGCCCTGGCTCTaGCCCTGGGCACCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IALEGGSWLSASVGRWVELMPWL*PWAPSA
Trigger: GGCTGAGGGTGCCCAGGGCAAGAGCCAGGGCATGAG...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp CTGGTCCTCGGTCACCATGTCCAGCACCTTCAGGAAGTCCTCCACTaGCCCATCGAACTCCTGGAGCCGTCGGTACATGGTGCCCCGGAA +
Preference number: 5 (lower is better)
Translates to: LVLGHHVQHLQEVLH*PIELLEPSVHGAPE
Trigger: TTCCGGGGCACCATGTACCGACGGCTCCAGGAGTTCGATGGGGCAGTGGAGGACTTCCTGAAGGTGCTGGACATGGTGACCGAGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp GCAGTGCACGGCAAAGTCGTTGTAGGTCAGCAACAGCTGGCGCTGTaGCTGCCGCACCATGTCCTCCTGGTCCTCGGTCACCATGTCCAG +
Preference number: 5 (lower is better)
Translates to: AVHGKVVVGQQQLAL*LPHHVLLVLGHHVQ
Trigger: CTGGACATGGTGACCGAGGACCAGGAGGACATGGTGCGGCAGGCACAGCGCCAGCTGTTGCTGACCTACAACGACTTTGCCGTGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp TGGCCCGGTACAGGTAGTACTGGGCCTTCTGGGGGTTGTGCCGGATaGCCGTGGAGAAGTGGTTCTCTGCCTTCTGGAACTGCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: WPGTGSTGPSGGCAG*PWRSGSLPSGTACA
Trigger: GGCGCAAGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACCTGTACCGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS TCA 90 bp GCAGCACCAGCGAGAGGGAGCAGGCCGCTGCCACCCGCCGCAGCGTaGGTGACGCTCACCATGCTGTCCATTTATGTGAAGAAAAGACGA +
Preference number: 5 (lower is better)
Translates to: AAPARGSRPLPPAAA*VTLTMLSIYVKKRR
Trigger: TCGTCTTTTCTTCACATAAATGGACAGCATGGTGAGCGTCACTCACGCTGCGGCGGGTGGCAGCGGCCTGCTCCCTCTCGCTGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 90 bp TCCTCGGAGGTCGCAATCAAAGGCTCCCCCTGCTTCCATGAGTGCTaGAGGGCCAAGGCCTTCTGGCGCTCCAACTCGTGCCGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: SSEVAIKGSPCFHEC*RAKAFWRSNSCRLS
Trigger: GCTTAAACGGCACGAGTTGGAGCGCCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp AGCTCCTCGGAGGTCGCAATCAAAGGCTCCCCCTGCTTCCATGAGTaGTGCAGGGCCAAGGCCTTCTGGCGCTCCAACTCGTGCCGTTTA +
Preference number: 5 (lower is better)
Translates to: SSSEVAIKGSPCFHE*CRAKAFWRSNSCRL
Trigger: TAAACGGCACGAGTTGGAGCGCCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp GAGGCTAAGCCTGGCAGGAAGGGGAGCGACCAGGCTAGACAGGCATaGTGCCGTGAGAACGGTTGTGTTGAAGGAGCTGCTAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: EAKPGRKGSDQARQA*CRENGCVEGAASAL
Trigger: CAAGGCGCTAGCAGCTCCTTCAACACAACCGTTCTCACGGCACCATGCCTGTCTAGCCTGGTCGCTCCCCTTCCTGCCAGGCTTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS TCA 90 bp GATCCCTTTGGGGGCTGGAATCACCCATGGCTTTGGGATGTCCCGTaGGGGGCCCTGGTCAACCTTCAGGGCATCCTCGTCCGAATCTGT +
Preference number: 5 (lower is better)
Translates to: DPFGGWNHPWLWDVP*GALVNLQGILVRIC
Trigger: ACAGATTCGGACGAGGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 90 bp GAGGCCTGGCGGAAGCACCAGGGACTTACAGCTCATGCTGGAGGCTaGAGAGGTCTGGTCAAGGTAGCTGTCAGACAGGGACGCCACCTT +
Preference number: 5 (lower is better)
Translates to: EAWRKHQGLTAHAGG*RGLVKVAVRQGRHL
Trigger: AAGGTGGCGTCCCTGTCTGACAGCTACCTTGACCAGACCTCTTCAGCCTCCAGCATGAGCTGTAAGTCCCTGGTGCTTCCGCCAGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS TCA 90 bp GGTCTTCGACCCCTGAGCTTTGACTACCCTGCTGCCTTAGCTTCCTaGGGCCTGGCGGAAGCACCAGGGACTTACAGCTCATGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GLRPLSFDYPAALAS*GLAEAPGTYSSCWR
Trigger: CCTCCAGCATGAGCTGTAAGTCCCTGGTGCTTCCGCCAGGCCTCAGGAAGCTAAGGCAGCAGGGTAGTCAAAGCTCAGGGGTCGAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 90 bp GCTAAGCCTGGCAGGAAGGGGAGCGACCAGGCTAGACAGGCATGGTaGCGTGAGAACGGTTGTGTTGAAGGAGCTGCTAGCGCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: AKPGRKGSDQARQAW*RENGCVEGAASALV
Trigger: AACCAAGGCGCTAGCAGCTCCTTCAACACAACCGTTCTCACGGCACCATGCCTGTCTAGCCTGGTCGCTCCCCTTCCTGCCAGGCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 90 bp CTATGGCAAGAAACAGGCTTTGTAGTTCAGATGGTAGGAGGCCCGTaGAGCTGCACCTCTAGAAGGCCAGCAGCCCTGGGCCCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: LWQETGFVVQMVGGP*SCTSRRPAALGPSV
Trigger: CACCGAGGGGCCCAGGGCTGCTGGCCTTCTAGAGGTGCAGCTGCACGGGCCTCCTACCATCTGAACTACAAAGCCTGTTTCTTGCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp GGTACAGGTAGTACTGGGCCTTCTGGGGGTTGTGCCGGATGGCCGTaGAGAAGTGGTTCTCTGCCTTCTGGAACTGCTTGCGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GTGSTGPSGGCAGWP*RSGSLPSGTACASA
Trigger: AGCAGAGGCGCAAGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACCTGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS CCA 90 bp GGTACAGGTAGTACTGGGCCTTCTGGGGGTTGTGCCGGATGGCCGTaGAGAAGTGGTTCTCTGCCTTCTGGAACTGCCGCCTCGGTTGAT +
Preference number: 5 (lower is better)
Translates to: GTGSTGPSGGCAGWP*RSGSLPSGTAASVD
Trigger: ATCAACCGAGGCGGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACCTGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp ACACCTGTAGACAGCGAGGTACACCATAGTGCTCCAGGTGCCAGCTaGGAGTTGCGCTCTGGGCTCCATCCACTTCAGCCCAACGTCTCC +
Preference number: 5 (lower is better)
Translates to: TPVDSEVHHSAPGAS*ELRSGLHPLQPNVS
Trigger: GGAGACGTTGGGCTGAAGTGGATGGAGCCCAGAGCGCAACTCCCAGCTGGCACCTGGAGCACTATGGTGTACCTCGCTGTCTACAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp GTCATTCTCCTGAGCTTGGAGGTCTTTGAAGGTGCCAGGTTAGAGTaGGGTGGGGACACGCAGAGGCTAAGCCTGGCAGGAAGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: VILLSLEVFEGARLE*GGDTQRLSLAGRGA
Trigger: CGCTCCCCTTCCTGCCAGGCTTAGCCTCTGCGTGTCCCCACCCCACTCTAACCTGGCACCTTCAAAGACCTCCAAGCTCAGGAGAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAACTGGGGTCCAGAGGGTaGTTCTCGATGGCACGGTTG +
Preference number: 5 (lower is better)
Translates to: IALEGGSWLSASVGRWVELGSRG*FSMARL
Trigger: CAACCGTGCCATCGAGAACAACCCTCTGGACCCCAG...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp AGTCATAGAAAGCCTCAGTCTTGGTGGAACTTCGGAGCAGTCCCCTaGTTCGGCCCTGGGTGGCATCAACCTTGCTGGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SHRKPQSWWNFGAVP*FGPGWHQPCWVSSS
Trigger: GGAGCTGGAGACCCAGCAAGGTTGATGCCACCCAGGGCCGAAGCAGGGGACTGCTCCGAAGTTCCACCAAGACTGAGGCTTTCTATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 90 bp CAAGAAACAGGCTTTGTAGTTCAGATGGTAGGAGGCCCGTGCAGCTaGACCTCTAGAAGGCCAGCAGCCCTGGGCCCCTCGGTGGTCATT +
Preference number: 5 (lower is better)
Translates to: QETGFVVQMVGGPCS*TSRRPAALGPSVVI
Trigger: AATGACCACCGAGGGGCCCAGGGCTGCTGGCCTTCTAGAGGTGCAGCTGCACGGGCCTCCTACCATCTGAACTACAAAGCCTGTTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp TTTGGAACACGTGGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTTaGGGGCTGGAATCACCCATGGCTTTGGGATGTCCCGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: FGTRGWSQRCAAGSL*GLESPMALGCPVRG
Trigger: GCCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTCAGGATCCCCGCATCTaGGCGCGCCTGCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAQDPRI*ARLLGL
Trigger: CAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTG...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 90 bp GAGTCAGAGAATGTCACGGCGGTGGCTGAGGTGCTCCTGTATTCCTaGCAGATAGCCGACATCTCAGTCTCTGAGGTGCCTGTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ESENVTAVAEVLLYS*QIADISVSEVPVVL
Trigger: CAGGACCACAGGCACCTCAGAGACTGAGATGTCGGCTATCTGCCAGGAATACAGGAGCACCTCAGCCACCGCCGTGACATTCTCTGACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS-3UTR CAA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTTCGTCCCGGAGGGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLASSRRA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCCCTCCGGGACGA...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp CAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGTGCTGGGCTCCTGCCTaGGGCCCTGGGTGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QLWDQRTVAKTFNCSGRRCWAPA*GPGWPQ
Trigger: TTGAGGCCACCCAGGGCCCAAGGCAGGAGCCCAGCA...CCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCCGGCCACGAGCAGCCTaGACCTTTCTGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GLLLRLLIALEGGSWLSARPRAA*TFLGLC
Trigger: GCAGAGGCCCAGAAAGGTCAAGGCTGCTCGTGGCCG...GGCACTCAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp GGACCATGGCTTAGTGCCTCCCTGTTGTTCCCAGAGTCCGAGGATTaGGTCTTCAACAGTGACGAGTCAGAGAATGTCACGGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GPWLSASLLFPESED*VFNSDESENVTAVA
Trigger: AGCCACCGCCGTGACATTCTCTGACTCGTCACTGTTGAAGACGCAATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAGCCATGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 90 bp TCATTCCTGTGCCTAGTATTGAGCACAGGCCTGGCCCAGGGCACTTaGGGAGTTTGCTGGATTCACAAAATGAAGAAGGGGCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SFLCLVLSTGLAQGT*GVCWIHKMKKGPGP
Trigger: GGGCCCAGGCCCCTTCTTCATTTTGTGAATCCAGCAAACTCCCCAAGTGCCCTGGGCCAGGCCTGTGCTCAATACTAGGCACAGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 90 bp TGGACAGCTCTGGGAAAAGGGGCTTCCCAATCTCACACTGGCCTGTaGCCCAGAGGCTTCGCATCACCAAAGGGAAAGACCTGCAGATCA +
Preference number: 5 (lower is better)
Translates to: WTALGKGASQSHTGL*PRGFASPKGKTCRS
Trigger: TGATCTGCAGGTCTTTCCCTTTGGTGATGCGAAGCCTCTGGGCCACAGGCCAGTGTGAGATTGGGAAGCCCCTTTTCCCAGAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp TGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGCTGGCCTGCGGGTGCTaGGGATTCAACAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: WDQRTVAKTFNCSGRRQLLACGC*GFNSKA
Trigger: CGCCTTGCTGTTGAATCCCAAGCACCCGCAGGCCAG...CAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp ATTGCTCTGGAAGGAGGCAGCTGGCTGAGTGCCAGTGTGGGGAGGTGGGTAGAATTGCTGGAGTTCCTCTaGTGTATAGTGGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: IALEGGSWLSASVGRWVELLEFL*CIVALV
Trigger: GACCAAGGCCACTATACACAAGAGGAACTCCAGCAA...TTCTACCCACCTCCCCACACTGGCACTCAGCCAGCTGCCTCCTTCCAGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTTGGGTGGCATCAACCTaGCTGGGTCTCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: DQRTVAKTFNCSGRRQLAWVAST*LGLQLR
Trigger: CCGGAGCTGGAGACCCAGCAAGGTTGATGCCACCCA...AGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp ACATCACAGATGCTTTGGAACACGTGGCTGGTCCCAAAGATGTGCTaGAGGATCCCTTTGGGGGCTGGAATCACCCATGGCTTTGGGATG +
Preference number: 5 (lower is better)
Translates to: TSQMLWNTWLVPKMC*RIPLGAGITHGFGM
Trigger: CATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 90 bp TGCCCTGTCTCCTGGCTGTGGGTCACCTGGGAGCCTTCTTCCTGTTaGAGCTTAGAATTCATGTCTCAGGGCAAGGACTATGCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: CPVSWLWVTWEPSSC*SLEFMSQGKDYASH
Trigger: ATGACTGGCATAGTCCTTGCCCTGAGACATGAATTCTAAGCTCCAACAGGAAGAAGGCTCCCAGGTGACCCACAGCCAGGAGACAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGCGGCCTTGCTGGAAGTaGAGCTCATGCCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLRPCWK*SSCPGS
Trigger: AGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCG...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp TTTACATCACAGATGCTTTGGAACACGTGGCTGGTCCCAAAGATGTaGTGCAGGATCCCTTTGGGGGCTGGAATCACCCATGGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: FTSQMLWNTWLVPKM*CRIPLGAGITHGFG
Trigger: CCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp CTTAGAATTCATGTCTCAGGGCAAGGACTATGCCAGTCATTCCTGTaGCTAGTATTGAGCACAGGCCTGGCCCAGGGCACTTGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: LRIHVSGQGLCQSFL*LVLSTGLAQGTWGV
Trigger: AACTCCCCAAGTGCCCTGGGCCAGGCCTGTGCTCAATACTAGGCACAGGAATGACTGGCATAGTCCTTGCCCTGAGACATGAATTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGCCTTCTGGAACTGCTaGCGCCTCTGCTCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRAFWNC*RLCSQK
Trigger: CTTCTGCGAGCAGAGGCGCAAGCAGTTCCAGAAGGC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp ACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGAGGCAGCTGGCTGCAGGTGGACTCGGCCTaGCTGGAAGTTGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: TRGLLLRLLIALEGGSWLQVDSA*LEVELM
Trigger: CATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTG...CAGCCAGCTGCCTCCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 90 bp AACCCTGTGACCTTTGGTTTTACATCACAGATGCTTTGGAACACGTaGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTTGGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: NPVTFGFTSQMLWNT*LVPKMCCRIPLGAG
Trigger: TCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGTAAAACCAAAGGTCACAGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 90 bp TTCTTCCTGTTGGAGCTTAGAATTCATGTCTCAGGGCAAGGACTATaGCAGTCATTCCTGTGCCTAGTATTGAGCACAGGCCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: FFLLELRIHVSGQGL*QSFLCLVLSTGLAQ
Trigger: CTGGGCCAGGCCTGTGCTCAATACTAGGCACAGGAATGACTGGCATAGTCCTTGCCCTGAGACATGAATTCTAAGCTCCAACAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp ACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGGAAGGGACAGGGACGCCACCTaGCTAGGTATGAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: TQLWDQRTVAKTFNCSGRDRDAT*LGMSSD
Trigger: ATCAGAGCTCATACCTAGCAAGGTGGCGTCCCTGTC...CCTTCCAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTTGGGCACCCTCAGCCTaGCTGGACCTCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAWAPSA*LDLWPW
Trigger: CCAGGGCCAGAGGTCCAGCAAGGCTGAGGGTGCCCA...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 90 bp GTAAATTGTAAAGGGCTGTGCCCTGGGGAATGCTTACGGAGGACTTaGGGAGCTTCTGTAGGCTTTACCCCCATCCATTCTCCCAATACA +
Preference number: 5 (lower is better)
Translates to: VNCKGLCPGECLRRT*GASVGFTPIHSPNT
Trigger: TGTATTGGGAGAATGGATGGGGGTAAAGCCTACAGAAGCTCCTCAAGTCCTCCGTAAGCATTCCCCAGGGCACAGCCCTTTACAATTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTTGGGCCTTCTGGGGGTaGTGCCGGATGGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIWAFWG*CRMAVE
Trigger: CTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCA...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 90 bp GCTTTACCCCCATCCATTCTCCCAATACAAGTGAAGACGGAGGGATaGGGAGAGCTGCTAATGACCATTTCACTGAACAGGAAACCAAAG +
Preference number: 5 (lower is better)
Translates to: ALPPSILPIQVKTEG*GELLMTISLNRKPK
Trigger: CTTTGGTTTCCTGTTCAGTGAAATGGTCATTAGCAGCTCTCCCCATCCCTCCGTCTTCACTTGTATTGGGAGAATGGATGGGGGTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS-3UTR CAA 90 bp AATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTCTGTCCTGCTTCAGCTCGTaGGTGATGAGCGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: NKLSCGTRGLLLRLLIALSCFSS*VMSVRQ
Trigger: CTGCCTCACGCTCATCACCAACGAGCTGAAGCAGGA...CAGAGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTATTCTCGATGGCACGGTaGATCCGCTGCAGTGCGTGC +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLFSMAR*IRCSAC
Trigger: GCACGCACTGCAGCGGATCAACCGTGCCATCGAGAA...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGAATCACCCATGGCTTaGGGATGTCCCGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIESPMA*GCPVRG
Trigger: GCCCCTCACGGGACATCCCAAAGCCATGGGTGATTC...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTATGCTGCAGGATCCCTTaGGGGGCTGGAATCACCCAT +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLCCRIP*GAGITH
Trigger: ATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCA...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTTCGGCAAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIASAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTTGCCGA...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTACAGGGACAGCTTTGGTaGCTTGGGGTTGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLQGQLW*LGVEEQ
Trigger: CTGCTCCTCAACCCCAAGCAACCAAAGCTGTCCCTG...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTATGGCCCTGGGTGGCCTaGATTTTTCTGGGACCATGG +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLWPWVA*IFLGPW
Trigger: CCATGGTCCCAGAAAAATCAAGGCCACCCAGGGCCA...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGGCGCTCCAGGTGCTaGCAGTTGTCCTGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLRRSRC*QLSCCN
Trigger: ATTACAGCAGGACAACTGCAAGCACCTGGAGCGCCT...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTCCTCTGGCCCTGGCCTaGGGCATACTCAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLIPLALA*GILSFA
Trigger: AGCAAAACTGAGTATGCCCAAGGCCAGGGCCAGAGG...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp GTAAAAGAAAACAAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTATACATCACAGATGCTTaGGAACACGTGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: VKENKYNKLSCGTRGLLLYITDA*EHVAGP
Trigger: GGGACCAGCCACGTGTTCCAAAGCATCTGTGATGTA...TAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTTGTTTTCTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp AAGTATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTCTTAGTGCCTCCCTGTaGTTCCCAGAGTCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: KYNKLSCGTRGLLLRLLILSASL*FPESED
Trigger: ATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAG...AATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS-3UTR CAA 90 bp TATAATAAACTCAGCTGTGGGACCAGAGGACTGTTGCTAAGACTTTTAATTGCTGGGACCAGAGGACTGTaGCTAAGACTTTTAATTGCT +
Preference number: 5 (lower is better)
Translates to: YNKLSCGTRGLLLRLLIAGTRGL*LRLLIA
Trigger: AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCC...AGCAATTAAAAGTCTTAGCAACAGTCCTCTGGTCCCACAGCTGAGTTTATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 90 bp AAGGGATGCTGGTATTCCTCTACTTCAATTGCTTCAAGTTTCCTTTaGACATTAGTGTACTTGATGTCTACCAGCAGTAGAACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: KGCWYSSTSIASSFL*TLVYLMSTSSRTEE
Trigger: TTCCTCTGTTCTACTGCTGGTAGACATCAAGTACACTAATGTTCAAAGGAAACTTGAAGCAATTGAAGTAGAGGAATACCAGCATCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp AGCCCATCTTCTCCTGCAGCAGGCCCATGCGCGTGTTaGCGCCCTCGTCCTGAGGGCTCAGCGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: SPSSPAAGPCAC*RPRPEGSAPAP
Trigger: AGGCGCTGGCGCTGAGCCCTCAGGACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGGAGAAGATGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS CAA 90 bp GGGCCCTGCCACTCGCCTCCCGAGCGAGGACTGCGCACACCCGCCTaGGGGCCTCTGAGGAGCAGCCTCCCCATTCTTCACTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GPCHSPPERGLRTPA*GPLRSSLPILHFCL
Trigger: GAGACAGAAGTGAAGAATGGGGAGGCTGCTCCTCAGAGGCCCCAAGGCGGGTGTGCGCAGTCCTCGCTCGGGAGGCGAGTGGCAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp CCCTGCACAGCCAGGATCCCCGCATCTTGGCGCGCCTaGTGGGCCTGGGCCACCATCTTCTGGAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: PCTARIPASWRA*WAWATIFWSSI
Trigger: GATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp CGGTTGATCCGCTGCAGTGCGTGCTGCAGCTTGCCCTaGACAGCCAGGATCCCCGCATCTTGGCGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: RLIRCSACCSLP*TARIPASWRAC
Trigger: GCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp GCTCGCAGAAGCCCATCTTCTCCTGCAGCAGGCCCATaGGCGTGTTGGCGCCCTCGTCCTGAGGGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: ARRSPSSPAAGP*ACWRPRPEGSA
Trigger: CGCTGAGCCCTCAGGACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGGAGAAGATGGGCTTCTGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS CCA 72 bp TGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTTaGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CSLPCTARIPAS*RACWAWATIFW
Trigger: CCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 72 bp CTGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTaGGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: LQLALHSQDPRI*ARLLGLGHHLL
Trigger: CAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 72 bp CACTCGCCTCCCGAGCGAGGACTGCGCACACCCGCCTaGGGGCCTCTGAGGAGCAGCCTCCCCATTCTTCAC +
Preference number: 6 (lower is better)
Translates to: HSPPERGLRTPA*GPLRSSLPILH
Trigger: GTGAAGAATGGGGAGGCTGCTCCTCAGAGGCCCCAAGGCGGGTGTGCGCAGTCCTCGCTCGGGAGGCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 90 bp CAGTGCGTGCTGCAGCTTGCCCTGCACAGCCAGGATCCCCGCATCTaGGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTGGAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: QCVLQLALHSQDPRI*ARLLGLGHHLLEQH
Trigger: ATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 72 bp GCTGGGTCCCCAGGTGGACTCGGCCTTGCTGGAAGTTaGGCTCATGCCCTGGCTCTTGCCCTGGGCACCCTC +
Preference number: 6 (lower is better)
Translates to: AGSPGGLGLAGS*AHALALALGTL
Trigger: GAGGGTGCCCAGGGCAAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTGGGGACCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp TGCTTGCGCCTCTGCTCGCAGAAGCCCATCTTCTCCTaGAGCAGGCCCATGCGCGTGTTGGCGCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: CLRLCSQKPIFS*SRPMRVLAPSS
Trigger: GGACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGGAGAAGATGGGCTTCTGCGAGCAGAGGCGCAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS GCA 72 bp CTCCGGCCACGAGCAGCCTTGACCTTTCTGGGCCTCTaGCTTGGGCTCCGGGTGGTCTTGGTCTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LRPRAALTFLGL*LGLRVVLVLLG
Trigger: GCCCAGCAAGACCAAGACCACCCGGAGCCCAAGGCAGAGGCCCAGAAAGGTCAAGGCTGCTCGTGGCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp TCTTGGCGCGCCTGCTGGGCCTGGGCCACCATCTTCTaGAGCAGCATCCTGGCCTGCGGGTGCTTGGGATTC +
Preference number: 6 (lower is better)
Translates to: SWRACWAWATIF*SSILACGCLGF
Trigger: GAATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp TGCACAGCCAGGATCCCCGCATCTTGGCGCGCCTGCTaGGCCTGGGCCACCATCTTCTGGAGCAGCATCCTG +
Preference number: 6 (lower is better)
Translates to: CTARIPASWRAC*AWATIFWSSIL
Trigger: CAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGATGCGGGGATCCTGGCTGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 72 bp CCGAGCGAGGACTGCGCACACCCGCCTTGGGGCCTCTaGGGAGCAGCCTCCCCATTCTTCACTTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSEDCAHPPWGL*GAASPFFTSVS
Trigger: GGAGACAGAAGTGAAGAATGGGGAGGCTGCTCCTCAGAGGCCCCAAGGCGGGTGTGCGCAGTCCTCGCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp CGGCCTTGCTGGAAGTTGAGCTCATGCCCTGGCTCTTaGCCTGGGCACCCTCAGCCTTGCTGGACCTCTGGC +
Preference number: 6 (lower is better)
Translates to: RPCWKLSSCPGS*PGHPQPCWTSG
Trigger: GCCAGAGGTCCAGCAAGGCTGAGGGTGCCCAGGGCAAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp GCTGGGCCTGGGCCACCATCTTCTGGAGCAGCATCCTaGCCTGCGGGTGCTTGGGATTCAACAGCAAGGCGC +
Preference number: 6 (lower is better)
Translates to: AGPGPPSSGAAS*PAGAWDSTARR
Trigger: GCGCCTTGCTGTTGAATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp TGGAACTTCGGAGCAGTCCCCTGCTTCGGCCCTGGGTaGCATCAACCTTGCTGGGTCTCCAGCTCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: WNFGAVPCFGPG*HQPCWVSSSGH
Trigger: GTGGCCGGAGCTGGAGACCCAGCAAGGTTGATGCCACCCAGGGCCGAAGCAGGGGACTGCTCCGAAGTTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp GACTTGGGCTGGGTCCCCAGGTGGACTCGGCCTTGCTaGAAGTTGAGCTCATGCCCTGGCTCTTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: DLGWVPRWTRPC*KLSSCPGSCPG
Trigger: CCCAGGGCAAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTGGGGACCCAGCCCAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 72 bp GGGGGCTGGAATCACCCATGGCTTTGGGATGTCCCGTaGGGGGCCCTGGTCAACCTTCAGGGCATCCTCGTC +
Preference number: 6 (lower is better)
Translates to: GGWNHPWLWDVP*GALVNLQGILV
Trigger: GACGAGGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 72 bp GGCTTTGTAGTTCAGATGGTAGGAGGCCCGTGCAGCTaGACCTCTAGAAGGCCAGCAGCCCTGGGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: GFVVQMVGGPCS*TSRRPAALGPS
Trigger: CGAGGGGCCCAGGGCTGCTGGCCTTCTAGAGGTGCAGCTGCACGGGCCTCCTACCATCTGAACTACAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp TGCTGGATTCACAAAATGAAGAAGGGGCCTGGGCCCTaGCACTCGCCTCCCGAGCGAGGACTGCGCACACCC +
Preference number: 6 (lower is better)
Translates to: CWIHKMKKGPGP*HSPPERGLRTP
Trigger: GGGTGTGCGCAGTCCTCGCTCGGGAGGCGAGTGGCAGGGCCCAGGCCCCTTCTTCATTTTGTGAATCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp TTGGTGGAACTTCGGAGCAGTCCCCTGCTTCGGCCCTaGGTGGCATCAACCTTGCTGGGTCTCCAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: LVELRSSPLLRP*VASTLLGLQLR
Trigger: CCGGAGCTGGAGACCCAGCAAGGTTGATGCCACCCAGGGCCGAAGCAGGGGACTGCTCCGAAGTTCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 72 bp CTGAGACTTGGGCTGGGTCCCCAGGTGGACTCGGCCTaGCTGGAAGTTGAGCTCATGCCCTGGCTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: LRLGLGPQVDSA*LEVELMPWLLP
Trigger: GGGCAAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTGGGGACCCAGCCCAAGTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 90 bp TCAGTTTTGCTGAGACTTGGGCTGGGTCCCCAGGTGGACTCGGCCTaGCTGGAAGTTGAGCTCATGCCCTGGCTCTTGCCCTGGGCACCC +
Preference number: 6 (lower is better)
Translates to: SVLLRLGLGPQVDSA*LEVELMPWLLPWAP
Trigger: GGGTGCCCAGGGCAAGAGCCAGGGCATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTGGGGACCCAGCCCAAGTCTCAGCAAAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 90 bp GTAGACAGCGAGGTACACCATAGTGCTCCAGGTGCCAGCTGGGAGTaGCGCTCTGGGCTCCATCCACTTCAGCCCAACGTCTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: VDSEVHHSAPGASWE*RSGLHPLQPNVSLG
Trigger: CCCCAGGGAGACGTTGGGCTGAAGTGGATGGAGCCCAGAGCGCAACTCCCAGCTGGCACCTGGAGCACTATGGTGTACCTCGCTGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS TCA 72 bp GACTGGGGTCCAGAGGGTTGTTCTCGATGGCACGGTTaGTCCGCTGCAGTGCGTGCTGCAGCTTGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: DWGPEGCSRWHG*SAAVRAAACPA
Trigger: TGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCTGGACCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 72 bp CAGGGCCACTCGGCTAAGAAGCAGAGAGGCCGGGTTTaGATCCAGGTCTGCTGGCTGCCACAGCCAGACCCT +
Preference number: 6 (lower is better)
Translates to: QGHSAKKQRGRV*IQVCWLPQPDP
Trigger: AGGGTCTGGCTGTGGCAGCCAGCAGACCTGGATTCAAACCCGGCCTCTCTGCTTCTTAGCCGAGTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp GGCATAGAAGTCCACCAGCTGTGGGTCCAGGTGGAGTaGGCGGGAGAAGAGCAGCACAGCTGTCTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GIEVHQLWVQVE*AGEEQHSCLPV
Trigger: GACTGGGAGACAGCTGTGCTGCTCTTCTCCCGCGCACTCCACCTGGACCCACAGCTGGTGGACTTCTATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 72 bp TTCTCGATGGCACGGTTGATCCGCTGCAGTGCGTGCTaGAGCTTGCCCTGCACAGCCAGGATCCCCGCATCT +
Preference number: 6 (lower is better)
Translates to: FSMARLIRCSAC*SLPCTARIPAS
Trigger: AGATGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp AGGGTTGTTCTCGATGGCACGGTTGATCCGCTGCAGTaGGTGCTGCAGCTTGCCCTGCACAGCCAGGATCCC +
Preference number: 6 (lower is better)
Translates to: RVVLDGTVDPLQ*VLQLALHSQDP
Trigger: GGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp TCCAGAGGGTTGTTCTCGATGGCACGGTTGATCCGCTaGAGTGCGTGCTGCAGCTTGCCCTGCACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRGLFSMARLIR*SACCSLPCTAR
Trigger: CCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp AGCAGAGAGGCCGGGTTTGAATCCAGGTCTGCTGGCTaGCACAGCCAGACCCTACCTAGGCTGCGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SREAGFESRSAG*HSQTLPRLRVS
Trigger: AGAGACCCGCAGCCTAGGTAGGGTCTGGCTGTGGCAGCCAGCAGACCTGGATTCAAACCCGGCCTCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp GCCTTCTGGGGGTTGTGCCGGATGGCCGTGGAGAAGTaGTTCTCTGCCTTCTGGAACTGCTTGCGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: AFWGLCRMAVEK*FSAFWNCLRLC
Trigger: GCAGAGGCGCAAGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS CCA 72 bp AGTACTGGGCCTTCTGGGGGTTGTGCCGGATGGCCGTaGAGAAGTGGTTCTCTGCCTTCTGGAACTGCCGCC +
Preference number: 6 (lower is better)
Translates to: STGPSGGCAGWP*RSGSLPSGTAA
Trigger: GGCGGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp GACAGCGAGGTACACCATAGTGCTCCAGGTGCCAGCTaGGAGTTGCGCTCTGGGCTCCATCCACTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: DSEVHHSAPGAS*ELRSGLHPLQP
Trigger: GGGCTGAAGTGGATGGAGCCCAGAGCGCAACTCCCAGCTGGCACCTGGAGCACTATGGTGTACCTCGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp GGGAGTTTGCTGGATTCACAAAATGAAGAAGGGGCCTaGGCCCTGCCACTCGCCTCCCGAGCGAGGACTGCG +
Preference number: 6 (lower is better)
Translates to: GSLLDSQNEEGA*ALPLASRARTA
Trigger: CGCAGTCCTCGCTCGGGAGGCGAGTGGCAGGGCCCAGGCCCCTTCTTCATTTTGTGAATCCAGCAAACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 72 bp AGACTGGGGTCCAGAGGGTTGTTCTCGATGGCACGGTaGATCCGCTGCAGTGCGTGCTGCAGCTTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RLGSRGLFSMAR*IRCSACCSLPC
Trigger: GCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAACAACCCTCTGGACCCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp TGCTGCAGGGCCAAGGCCTTCTGGCGCTCCAACTCGTaGCGTTTAAGCATCCCCACAATGCCTTGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: CCRAKAFWRSNS*RLSIPTMPCGL
Trigger: CAGCCCACAAGGCATTGTGGGGATGCTTAAACGGCACGAGTTGGAGCGCCAGAAGGCCTTGGCCCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp TTCAGCTCCTCGGAGGTCGCAATCAAAGGCTCCCCCTaGTTCCATGAGTGCTGCAGGGCCAAGGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: FSSSEVAIKGSP*FHECCRAKAFW
Trigger: CCAGAAGGCCTTGGCCCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGAGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp GGAACACACTGTGGGACTGTCAAGGACGGAATATTCTaGAGCACCAGCGAGAGGGAGCAGGCCGCTGCCACC +
Preference number: 6 (lower is better)
Translates to: GTHCGTVKDGIF*STSEREQAAAT
Trigger: GGTGGCAGCGGCCTGCTCCCTCTCGCTGGTGCTGCAGAATATTCCGTCCTTGACAGTCCCACAGTGTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp GGCAGGAAGGGGAGCGACCAGGCTAGACAGGCATGGTaGCGTGAGAACGGTTGTGTTGAAGGAGCTGCTAGC +
Preference number: 6 (lower is better)
Translates to: GRKGSDQARQAW*RENGCVEGAAS
Trigger: GCTAGCAGCTCCTTCAACACAACCGTTCTCACGGCACCATGCCTGTCTAGCCTGGTCGCTCCCCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp ACCTTCAGGAAGTCCTCCACTGCCCCATCGAACTCCTaGAGCCGTCGGTACATGGTGCCCCGGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: TFRKSSTAPSNS*SRRYMVPRKRK
Trigger: CTTCCTCTTCCGGGGCACCATGTACCGACGGCTCCAGGAGTTCGATGGGGCAGTGGAGGACTTCCTGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp CATGTTTGGTGTCAGGAATCAAGACAGCCTTGTAGGTaGGGTGGGTTACGGGAGGGGCCTCGAAGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: HVWCQESRQPCR*GGLREGPRRGP
Trigger: GGGCCCCCTTCGAGGCCCCTCCCGTAACCCACCCCACCTACAAGGCTGTCTTGATTCCTGACACCAAACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp CCTGGCAGGAAGGGGAGCGACCAGGCTAGACAGGCATaGTGCCGTGAGAACGGTTGTGTTGAAGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PGRKGSDQARQA*CRENGCVEGAA
Trigger: AGCAGCTCCTTCAACACAACCGTTCTCACGGCACCATGCCTGTCTAGCCTGGTCGCTCCCCTTCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 72 bp GCAGGATCCCTTTGGGGGCTGGAATCACCCATGGCTTaGGGATGTCCCGTGAGGGGCCCTGGTCAACCTTCA +
Preference number: 6 (lower is better)
Translates to: AGSLWGLESPMA*GCPVRGPGQPS
Trigger: TGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CAA 72 bp GCAGCCCTGGGCCCCTCGGTGGTCATTCTCCTGAGCTaGGAGGTCTTTGAAGGTGCCAGGTTAGAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: AALGPSVVILLS*EVFEGARLEWG
Trigger: ACCCCACTCTAACCTGGCACCTTCAAAGACCTCCAAGCTCAGGAGAATGACCACCGAGGGGCCCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 90 bp AGATGTGCTGCAGGATCCCTTTGGGGGCTGGAATCACCCATGGCTTaGGGATGTCCCGTGAGGGGCCCTGGTCAACCTTCAGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: RCAAGSLWGLESPMA*GCPVRGPGQPSGHP
Trigger: AGGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 72 bp GAAACAGGCTTTGTAGTTCAGATGGTAGGAGGCCCGTaGAGCTGCACCTCTAGAAGGCCAGCAGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ETGFVVQMVGGP*SCTSRRPAALG
Trigger: GCCCAGGGCTGCTGGCCTTCTAGAGGTGCAGCTGCACGGGCCTCCTACCATCTGAACTACAAAGCCTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp ATCACCCATGGCTTTGGGATGTCCCGTGAGGGGCCCTaGTCAACCTTCAGGGCATCCTCGTCCGAATCTGTC +
Preference number: 6 (lower is better)
Translates to: ITHGFGMSREGP*STFRASSSESV
Trigger: GACAGATTCGGACGAGGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 72 bp CGTGGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTTaGGGGCTGGAATCACCCATGGCTTTGGGATGTCCC +
Preference number: 6 (lower is better)
Translates to: RGWSQRCAAGSL*GLESPMALGCP
Trigger: GGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 72 bp AGTACTGGGCCTTCTGGGGGTTGTGCCGGATGGCCGTaGAGAAGTGGTTCTCTGCCTTCTGGAACTGCTTGC +
Preference number: 6 (lower is better)
Translates to: STGPSGGCAGWP*RSGSLPSGTAC
Trigger: GCAAGCAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS CCA 72 bp GGTGAGGTCCTGATCAACCTCAGTTTTGCTGAGACTTaGGCTGGGTCCCCAGGTGGACTCGGCCTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: GEVLINLSFAET*AGSPGGLGLAG
Trigger: TCCAGCAAGGCCGAGTCCACCTGGGGACCCAGCCCAAGTCTCAGCAAAACTGAGGTTGATCAGGACCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp TACCATGAAGTGCCTGGAGCAAGCCTCACCTCGTCCTaGGCAGCCCCGCAACAGTGTTACTCCCGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: YHEVPGASLTSS*AAPQQCYSRSR
Trigger: TCTAGAGCGGGAGTAACACTGTTGCGGGGCTGCCCAGGACGAGGTGAGGCTTGCTCCAGGCACTTCATGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 72 bp CTAAGCACCTCCTCCACCGACATGCCCGGGAAGAGGTaGGTCATCAGCAGGGACAGCTTTGGTTGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: LSTSSTDMPGKR*VISRDSFGCLG
Trigger: CCCCAAGCAACCAAAGCTGTCCCTGCTGATGACCAACCTCTTCCCGGGCATGTCGGTGGAGGAGGTGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 90 bp CTTTGGAACACGTGGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTaGGGGGCTGGAATCACCCATGGCTTTGGGATGTCCCGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: LWNTWLVPKMCCRIP*GAGITHGFGMSREG
Trigger: CCCCTCACGGGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CCA 72 bp ACAGGTAGTACTGGGCCTTCTGGGGGTTGTGCCGGATaGCCGTGGAGAAGTGGTTCTCTGCCTTCTGGAACT +
Preference number: 6 (lower is better)
Translates to: TGSTGPSGGCAG*PWRSGSLPSGT
Trigger: AGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp CTGAGCTTCCCGGTTTTACCTGCGGAATCTCAGGGGTaGCCTTCAGCTCCTCGGAGGTCGCAATCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSFPVLPAESQG*PSAPRRSQSKA
Trigger: AGCCTTTGATTGCGACCTCCGAGGAGCTGAAGGCCACCCCTGAGATTCCGCAGGTAAAACCGGGAAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp GGCTCCAGTTTGAGTCATAGAAAGCCTCAGTCTTGGTaGAACTTCGGAGCAGTCCCCTGCTTCGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GSSLSHRKPQSW*NFGAVPCFGPG
Trigger: CCCAGGGCCGAAGCAGGGGACTGCTCCGAAGTTCCACCAAGACTGAGGCTTTCTATGACTCAAACTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp CTGGGAAAAGGGGCTTCCCAATCTCACACTGGCCTGTaGCCCAGAGGCTTCGCATCACCAAAGGGAAAGACC +
Preference number: 6 (lower is better)
Translates to: LGKGASQSHTGL*PRGFASPKGKT
Trigger: GGTCTTTCCCTTTGGTGATGCGAAGCCTCTGGGCCACAGGCCAGTGTGAGATTGGGAAGCCCCTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 72 bp ACGTGGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTaGGGGGCTGGAATCACCCATGGCTTTGGGATGTCC +
Preference number: 6 (lower is better)
Translates to: TWLVPKMCCRIP*GAGITHGFGMS
Trigger: GGACATCCCAAAGCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 72 bp CCTGTATTCCTGGCAGATAGCCGACATCTCAGTCTCTaGGGTGCCTGTGGTCCTGAAGCTCATGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PVFLADSRHLSL*GACGPEAHAGG
Trigger: GCCTCCAGCATGAGCTTCAGGACCACAGGCACCTCAGAGACTGAGATGTCGGCTATCTGCCAGGAATACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373289.4
ENST00000488285.1
CDS GCA 72 bp ATGCTTTGGAACACGTGGCTGGTCCCAAAGATGTGCTaGAGGATCCCTTTGGGGGCTGGAATCACCCATGGC +
Preference number: 6 (lower is better)
Translates to: MLWNTWLVPKMC*RIPLGAGITHG
Trigger: GCCATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 72 bp CATGTCTCAGGGCAAGGACTATGCCAGTCATTCCTGTaGCTAGTATTGAGCACAGGCCTGGCCCAGGGCACT +
Preference number: 6 (lower is better)
Translates to: HVSGQGLCQSFL*LVLSTGLAQGT
Trigger: AGTGCCCTGGGCCAGGCCTGTGCTCAATACTAGGCACAGGAATGACTGGCATAGTCCTTGCCCTGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp AATGTCACGGCGGTGGCTGAGGTGCTCCTGTATTCCTaGCAGATAGCCGACATCTCAGTCTCTGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: NVTAVAEVLLYS*QIADISVSEVP
Trigger: AGGCACCTCAGAGACTGAGATGTCGGCTATCTGCCAGGAATACAGGAGCACCTCAGCCACCGCCGTGACATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CAA 90 bp CATGTCTCAGGGCAAGGACTATGCCAGTCATTCCTGTGCCTAGTATaGAGCACAGGCCTGGCCCAGGGCACTTGGGGAGTTTGCTGGATT +
Preference number: 6 (lower is better)
Translates to: HVSGQGLCQSFLCLV*STGLAQGTWGVCWI
Trigger: AATCCAGCAAACTCCCCAAGTGCCCTGGGCCAGGCCTGTGCTCAATACTAGGCACAGGAATGACTGGCATAGTCCTTGCCCTGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp CAGATGCTTTGGAACACGTGGCTGGTCCCAAAGATGTaGTGCAGGATCCCTTTGGGGGCTGGAATCACCCAT +
Preference number: 6 (lower is better)
Translates to: QMLWNTWLVPKM*CRIPLGAGITH
Trigger: ATGGGTGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS CAA 90 bp TGGGTGGCCTTGATTTTTCTGGGACCATGGCTTAGTGCCTCCCTGTaGTTCCCAGAGTCCGAGGATTGCGTCTTCAACAGTGACGAGTCA +
Preference number: 6 (lower is better)
Translates to: WVALIFLGPWLSASL*FPESEDCVFNSDES
Trigger: TGACTCGTCACTGTTGAAGACGCAATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAGCCATGGTCCCAGAAAAATCAAGGCCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS TCA 72 bp CAAAAAGGCATTGTCCCTGTAGGTAGAGCACAAAGGTaGGGCGCTCCAGGTGCTTGCAGTTGTCCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: QKGIVPVGRAQR*GAPGACSCPAV
Trigger: TACAGCAGGACAACTGCAAGCACCTGGAGCGCCTCACCTTTGTGCTCTACCTACAGGGACAATGCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 72 bp TGCAGTAGTATGATTACGGCTCACTGCAGCCTCAAATaGCTCTGGGGCTCAAGAGATCCTCTTGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: CSSMITAHCSLK*LWGSRDPLASA
Trigger: GGCTGAGGCAAGAGGATCTCTTGAGCCCCAGAGTCATTTGAGGCTGCAGTGAGCCGTAATCATACTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS GCA 72 bp CTTAGTGCCTCCCTGTTGTTCCCAGAGTCCGAGGATTaGGTCTTCAACAGTGACGAGTCAGAGAATGTCACG +
Preference number: 6 (lower is better)
Translates to: LSASLLFPESED*VFNSDESENVT
Trigger: CGTGACATTCTCTGACTCGTCACTGTTGAAGACGCAATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp TTGGTTTTACATCACAGATGCTTTGGAACACGTGGCTaGTCCCAAAGATGTGCTGCAGGATCCCTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: LVLHHRCFGTRG*SQRCAAGSLWG
Trigger: CCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGTAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS TCA 72 bp GCCTTGGGCATACTCAGTTTTGCTGAGGCTCCAGTTTaGGTCATAGAAAGCCTCAGTCTTGGTGGAACTTCG +
Preference number: 6 (lower is better)
Translates to: ALGILSFAEAPV*VIESLSLGGTS
Trigger: CGAAGTTCCACCAAGACTGAGGCTTTCTATGACTCAAACTGGAGCCTCAGCAAAACTGAGTATGCCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS CCA 72 bp CCATCCATTCTCCCAATACAAGTGAAGACGGAGGGATaGGGAGAGCTGCTAATGACCATTTCACTGAACAGG +
Preference number: 6 (lower is better)
Translates to: PSILPIQVKTEG*GELLMTISLNR
Trigger: CCTGTTCAGTGAAATGGTCATTAGCAGCTCTCCCCATCCCTCCGTCTTCACTTGTATTGGGAGAATGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CAA 72 bp TTGATTTTTCTGGGACCATGGCTTAGTGCCTCCCTGTaGTTCCCAGAGTCCGAGGATTGCGTCTTCAACAGT +
Preference number: 6 (lower is better)
Translates to: LIFLGPWLSASL*FPESEDCVFNS
Trigger: ACTGTTGAAGACGCAATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAGCCATGGTCCCAGAAAAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373289.4
ENST00000488285.1
ENST00000489226.5
CDS GCA 72 bp TTGGAGCTTAGAATTCATGTCTCAGGGCAAGGACTATaGCAGTCATTCCTGTGCCTAGTATTGAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: LELRIHVSGQGL*QSFLCLVLSTG
Trigger: GCCTGTGCTCAATACTAGGCACAGGAATGACTGGCATAGTCCTTGCCCTGAGACATGAATTCTAAGCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS CCA 72 bp ACCTTTGGTTTTACATCACAGATGCTTTGGAACACGTaGCTGGTCCCAAAGATGTGCTGCAGGATCCCTTTG +
Preference number: 6 (lower is better)
Translates to: TFGFTSQMLWNT*LVPKMCCRIPL
Trigger: CAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGATGTAAAACCAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373289.4
CDS GCA 72 bp CCGCGCCCAGCCACATTTTCTATTGATGGCAAGGGATaGTGGTATTCCTCTACTTCAATTGCTTCAAGTTTC +
Preference number: 6 (lower is better)
Translates to: PRPATFSIDGKG*WYSSTSIASSF
Trigger: GAAACTTGAAGCAATTGAAGTAGAGGAATACCAGCATCCCTTGCCATCAATAGAAAATGTGGCTGGGCGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489226.5
CDS TCA 72 bp TGGTATTCCTCTACTTCAATTGCTTCAAGTTTCCTTTaGACATTAGTGTACTTGATGTCTACCAGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: WYSSTSIASSFL*TLVYLMSTSSR
Trigger: TCTACTGCTGGTAGACATCAAGTACACTAATGTTCAAAGGAAACTTGAAGCAATTGAAGTAGAGGAATACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489226.5