RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC14 (Homo sapiens)

Ensembl gene IDs: ENSG00000163728

Ensembl transcript IDs: ENST00000296015.9, ENST00000382584.8, ENST00000412756.6, ENST00000462895.1, ENST00000465065.5, ENST00000470669.5, ENST00000491380.5

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATCACCTGGTTCATTCAACCTTTGGCATATGCCTGCTACTAGGTaGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: GSPGSFNLWHMPATR*LRMVKYVLQLNAAS
Trigger: AGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCACCTAGTAGCAGGCATATGCCAAAGGTTGAATGAACCAGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR TCA 90 bp CTACAAGAAATAAGTCTGAATATCAATCAACCTCACCACGTCCACTaGTACCTCTTTGAGCATTTAGAAAAGAACACTGTGCCTGCCAAC +
Preference number: 1 (lower is better)
Translates to: LQEISLNINQPHHVH*YLFEHLEKNTVPAN
Trigger: GTTGGCAGGCACAGTGTTCTTTTCTAAATGCTCAAAGAGGTATCAGTGGACGTGGTGAGGTTGATTGATATTCAGACTTATTTCTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGATTCTTGGTAGGGGGTaGGGGTGCGGGTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: FEDALDECLLELREDSERILGRG*GCGWEL
Trigger: CAGCTCCCACCCGCACCCCCACCCCCTACCAAGAAT...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTTGCAGTGGTACCCATaGCCCAGAGTGCAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: VRVGADLCITECLRASLTLQWYP*PRVQER
Trigger: CCTTTCTTGCACTCTGGGTCATGGGTACCACTGCAA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR TCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGGGTGCGGGTGGGAGCTaGCCTGTGCATTACAGAATG +
Preference number: 2 (lower is better)
Translates to: FEDALDECLLELREDSERGAGGS*PVHYRM
Trigger: CATTCTGTAATGCACAGGTCAGCTCCCACCCGCACC...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCGACATTCCGTTAAGGTaGAGTGAAGGAGGAATCACC +
Preference number: 2 (lower is better)
Translates to: VRVGADLCITECLRASLTDIPLR*SEGGIT
Trigger: GGTGATTCCTCCTTCACTTCACCTTAACGGAATGTC...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTCATTTTCCAGTTTGTaGATGGGGATGAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: VRVGADLCITECLRASLTSFSSL*MGMSST
Trigger: GGTGCTGCTCATCCCCATCCACAAACTGGAAAATGA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLDALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 2 (lower is better)
Translates to: VRVGADLCITECLRASLTKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAATGCCTGCTACTAGGTaGCTTAGGATGGTAAAATAC +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLMPATR*LRMVKY
Trigger: GTATTTTACCATCCTAAGCCACCTAGTAGCAGGCAT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACTTGCAGTGGTACCCATaGCCCAGAGTGCAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHLQWYP*PRVQER
Trigger: CCTTTCTTGCACTCTGGGTCATGGGTACCACTGCAA...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATCTTGGCAGGTATACTTaGGCACAACTGCATGCAAAG +
Preference number: 2 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHLGRYT*AQLHAK
Trigger: CTTTGCATGCAGTTGTGCTCAAGTATACCTGCCAAG...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTACCATTATACACTAGATaGAGTAGCACCCTATCAGTT +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLPLYTR*SSTLSV
Trigger: AACTGATAGGGTGCTACTGCATCTAGTGTATAATGG...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR CCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGCAGACACAGCAGCAATaGTCCAATTCAGAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: FEDALDECLLELREDSERQTQQQ*SNSEEN
Trigger: ATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTG...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR CCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAGTAATCCCAACACTTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PKTSLNGILCNGADILGVVIPTL*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAAGTGTTGGGATTAC...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAATAAATCTTGTCCTCTaGATTCCTACAGAAGGAATC +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLINLVL*IPTEGI
Trigger: GATTCCTTCTGTAGGAATTCAGAGGACAAGATTTAT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAATCTGCCTGGATAGATaGCAAATACCCAATCTTTTA +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLICLDR*QIPNLL
Trigger: TAAAAGATTGGGTATTTGCCATCTATCCAGGCAGAT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR GCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAAAAAGGGGAAGCCATTaGAGTGGTACCCATGACCCA +
Preference number: 2 (lower is better)
Translates to: PKTSLNGILCNGADILGVKRGSH*SGTHDP
Trigger: TGGGTCATGGGTACCACTGCAATGGCTTCCCCTTTT...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTACTTTACTTTCGATTATaGACAAAAACAGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: ALDECLLELREDSERFLLLYFRL*TKTEAL
Trigger: TAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAG...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACTCCGTTAAGGTGAAGTaGAGGAGGAATCACCATGTT +
Preference number: 2 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHSVKVK*RRNHHV
Trigger: AACATGGTGATTCCTCCTTCACTTCACCTTAACGGA...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTTTTGGCATTAGTCATTaGAATGGCCAGAACAGCATT +
Preference number: 2 (lower is better)
Translates to: WLRMVKYVLQLNAASELTFGISH*NGQNSI
Trigger: AATGCTGTTCTGGCCATTTCAATGACTAATGCCAAA...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR GCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGAAAAGGGGAAGCCATTaGAGTGGTACCCATGACCCA +
Preference number: 2 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQKRGSH*SGTHDP
Trigger: TGGGTCATGGGTACCACTGCAATGGCTTCCCCTTTT...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR GCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 2 (lower is better)
Translates to: PKTSLNGILCNGADILGVDALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR TCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 2 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTGCCCAGTTGGATGCATaGTTACATAGGAAATCATTT +
Preference number: 2 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIAQLDA*LHRKSF
Trigger: AAATGATTTCCTATGTAATCATGCATCCAACTGGGC...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR TCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATTTAAAAACCACCAGGTaGGCTCCCTATAAGGACATT +
Preference number: 2 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHLKTTR*APYKDI
Trigger: AATGTCCTTATAGGGAGCTCACCTGGTGGTTTTTAA...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR TCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTATTCTTATGCCTTTTGTaGCCAGAAGAGGAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: PKTSLNGILCNGADILGVFLCLL*PEEEED
Trigger: ATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAA...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGCCCAAAAACCAGAAATaGAGGGAGAAACTGGGTAAC +
Preference number: 2 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQPKNQK*REKLGN
Trigger: GTTACCCAGTTTCTCCCTCCATTTCTGGTTTTTGGG...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTACCGTTATAAAAATGTaGTATTCCTCAATCCAAGAG +
Preference number: 2 (lower is better)
Translates to: WLRMVKYVLQLNAASELTTVIKM*YSSIQE
Trigger: CTCTTGGATTGAGGAATACCACATTTTTATAACGGT...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGTTAAAAACCACCAGGTaGGCTCCCTATAAGGACATT +
Preference number: 2 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQLKTTR*APYKDI
Trigger: AATGTCCTTATAGGGAGCTCACCTGGTGGTTTTTAA...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACTGTGGTTCAGATAAATaGTACAATAATCTCGGCTAC +
Preference number: 2 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHCGSDK*YNNLGY
Trigger: GTAGCCGAGATTATTGTATCATTTATCTGAACCACA...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTCTTTACTTTCGATTATaGACAAAAACAGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: TPNEKPNLVKPNHHRASILYFRL*TKTEAL
Trigger: TAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAG...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCATTTCCAAAAGCATCTTaGCAGGTATACTTGAGCACA +
Preference number: 2 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAFPKAS*QVYLST
Trigger: TGTGCTCAAGTATACCTGCCAAGATGCTTTTGGAAA...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR TCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 2 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR GCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACATACTTGAGCACAACTaGATGCAAAGATATAGTTCT +
Preference number: 2 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHILEHN*MQRYSS
Trigger: AGAACTATATCTTTGCATGCAGTTGTGCTCAAGTAT...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAACTTTACTTTCGATTATaGACAAAAACAGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIELYFRL*TKTEAL
Trigger: TAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAG...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR GCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTTGAGCACAACTGCATaGAAAGATATAGTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHLSTTA*KDIVLA
Trigger: TGCAAGAACTATATCTTTGCATGCAGTTGTGCTCAA...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CAA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTCTTGGCAGGTATACTaGAGCACAACTGCATGCAAA +
Preference number: 3 (lower is better)
Translates to: VRVGADLCITECLRASLTSWQVY*STTACK
Trigger: TTTGCATGCAGTTGTGCTCAAGTATACCTGCCAAGA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR CCA 72 bp GTCCAGAAGATGGGATCACCTGGTTCATTCAACCTTTaGCATATGCCTGCTACTAGGTGGCTTAGGATGGTA +
Preference number: 3 (lower is better)
Translates to: VQKMGSPGSFNL*HMPATRWLRMV
Trigger: TACCATCCTAAGCCACCTAGTAGCAGGCATATGCCAAAGGTTGAATGAACCAGGTGATCCCATCTTCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR TCA 72 bp GATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTaGGCTTACTGCCACTCCCCTCACCATCTAAGAGTA +
Preference number: 3 (lower is better)
Translates to: DGKIRPSAKRSF*AYCHSPHHLRV
Trigger: TACTCTTAGATGGTGAGGGGAGTGGCAGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR TCA 72 bp TACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATaGGCAGCACCAGATGTCACAGACACAGCAGCAATG +
Preference number: 3 (lower is better)
Translates to: YIGNHFPVCGWG*AAPDVTDTAAM
Trigger: CATTGCTGCTGTGTCTGTGACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR TCA 72 bp TATCAATCAACCTCACCACGTCCACTGATACCTCTTTaGGCATTTAGAAAAGAACACTGTGCCTGCCAACCA +
Preference number: 3 (lower is better)
Translates to: YQSTSPRPLIPL*AFRKEHCACQP
Trigger: TGGTTGGCAGGCACAGTGTTCTTTTCTAAATGCTCAAAGAGGTATCAGTGGACGTGGTGAGGTTGATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR CCA 72 bp GGTTCATTCAACCTTTGGCATATGCCTGCTACTAGGTaGCTTAGGATGGTAAAATACGTCCTTCAGCTAAAC +
Preference number: 3 (lower is better)
Translates to: GSFNLWHMPATR*LRMVKYVLQLN
Trigger: GTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCACCTAGTAGCAGGCATATGCCAAAGGTTGAATGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CAA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATATTTCCAAAAGCATCTaGGCAGGTATACTTGAGCAC +
Preference number: 3 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHISKSI*AGILEH
Trigger: GTGCTCAAGTATACCTGCCAAGATGCTTTTGGAAAT...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
3UTR-3UTR CAA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAATCACTTAATGGCATTTaGTGTAATGGTGCCGATATC +
Preference number: 3 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKSLNGI*CNGADI
Trigger: GATATCGGCACCATTACACAAAATGCCATTAAGTGA...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
3UTR-3UTR CAA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTATCACTTAATGGCATTTaGTGTAATGGTGCCGATATC +
Preference number: 3 (lower is better)
Translates to: PKTSLNGILCNGADILGVSLNGI*CNGADI
Trigger: GATATCGGCACCATTACACAAAATGCCATTAAGTGA...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
3UTR CCA 72 bp CATTATACACTAGATGCAGTAGCACCCTATCAGTTATaGCAATCAAAAATGTCTCCACATCTTGTCAAATGT +
Preference number: 3 (lower is better)
Translates to: HYTLDAVAPYQL*QSKMSPHLVKC
Trigger: ACATTTGACAAGATGTGGAGACATTTTTGATTGCCATAACTGATAGGGTGCTACTGCATCTAGTGTATAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
3UTR-3UTR CAA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAATCACTTAATGGCATTTaGTGTAATGGTGCCGATATC +
Preference number: 3 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKSLNGI*CNGADI
Trigger: GATATCGGCACCATTACACAAAATGCCATTAAGTGA...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTTCTCTTTTCTGCCCTaGAACGGGTGCTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTFSFLP*NGCWGG
Trigger: GCCGCCCCAGCACCCGTTGCAGGGCAGAAAAGAGAA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTKGPGP*LENAGP
Trigger: GGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTSKDDP*QFSDCR
Trigger: GCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCGTTTGTGGATGGGGATaGGCAGCACCAGATGTCACA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTVCGWG*AAPDVT
Trigger: TGTGACATCTGGTGCTGCTCATCCCCATCCACAAAC...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGCTCTCTTCTCTTTTCTaGCCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERLSSLF*PATGAG
Trigger: CCCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAG...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATATTCTTGGTAGGGGGTaGGGGTGCGGGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHILGRG*GCGWEL
Trigger: CAGCTCCCACCCGCACCCCCACCCCCTACCAAGAAT...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTGCAGTGGTACCCATaGCCCAGAGTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERLQWYP*PRVQER
Trigger: CCTTTCTTGCACTCTGGGTCATGGGTACCACTGCAA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTGGGCAGAGCTTGCAGTaGGCTGAGATAGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTGQSLQ*AEIAPL
Trigger: CAGTGGCGCTATCTCAGCTCACTGCAAGCTCTGCCC...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTKCGLS*CSLRSR
Trigger: TCTACTTCGGAGCGAACAGCAGGACAATCCACACTT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGGCTGGTGAGGTAGAATaGCTCACAGAACCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERAGEVE*LTEPGS
Trigger: GGAACCAGGTTCTGTGAGGCATTCTACCTCACCAGC...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCACTGCGAGAAGACTCTaGACGGTTCCTCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTTARRL*TVPLMF
Trigger: AAACATAAGAGGAACCGTTCAGAGTCTTCTCGCAGT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCATACTTAACTCTGCTTaGCAGGCACTCGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTILNSA*QALDSE
Trigger: TTCACTGTCGAGTGCCTGTCAAGCAGAGTTAAGTAT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTTTCTCTTTTCTGCCCTaGAACGGGTGCTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIFSFLP*NGCWGG
Trigger: GCCGCCCCAGCACCCGTTGCAGGGCAGAAAAGAGAA...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAAAAAGGGGAAGCCATTaGAGTGGTACCCATGACCCA +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLKRGSH*SGTHDP
Trigger: TGGGTCATGGGTACCACTGCAATGGCTTCCCCTTTT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAGGGTGGGGGTGCGGGTaGGAGCTGACCTGTGCATTA +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKGWGCG*ELTCAL
Trigger: TAATGCACAGGTCAGCTCCCACCCGCACCCCCACCC...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATCCGTGTCCGCTACTTaGGCCGGGTGGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIESVSAT*AGWYRK
Trigger: CTTCCTGTACCACCCGGCTCAAGTAGCGGACACGGA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296015.9
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTTCTTATGCCTTTTGTaGCCAGAAGAGGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTFLCLL*PEEEED
Trigger: ATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCTTAAAAACCACCAGGTaGGCTCCCTATAAGGACATT +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTLKTTR*APYKDI
Trigger: AATGTCCTTATAGGGAGCTCACCTGGTGGTTTTTAA...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAAATGCCTTCTGGAACTaGGAGAAGACTCTGAACGGT +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLNAFWN*EKTLNG
Trigger: ACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGAATGCCTTCTGGAACTaGGAGAAGACTCTGAACGGT +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERNAFWN*EKTLNG
Trigger: ACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATT...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIKGPGP*LENAGP
Trigger: GGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTT...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTSKDDP*QFSDCR
Trigger: GCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCT...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCCTCTCTACAAGTGTCTaGCAGAGGTATTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTLSTSV*QRYFLA
Trigger: TGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAG...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATCATTTTCCAGTTTGTaGATGGGGATGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLSFSSL*MGMSST
Trigger: GGTGCTGCTCATCCCCATCCACAAACTGGAAAATGA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTGGGTGGGGGTGCGGGTaGGAGCTGACCTGTGCATTA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIGWGCG*ELTCAL
Trigger: TAATGCACAGGTCAGCTCCCACCCGCACCCCCACCC...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAAAACAGTATTTTTCTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLKQYFS*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCCAAGAAAAATACTGTTT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAAGTTGCAGGTGCATCTaGTTTCCAGGAAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLSCRCI*FPGKCK
Trigger: TTTGCACTTTCCTGGAAATCAGATGCACCTGCAACT...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAACAGATCAACACCATaGAAAAACCGAATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTNRSTP*KNRIPE
Trigger: TTCGGGAATTCGGTTTTTTCATGGTGTTGATCTGTT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAGGTGCGGGTGGGAGCTaGCCTGTGCATTACAGAATG +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKGAGGS*PVHYRM
Trigger: CATTCTGTAATGCACAGGTCAGCTCCCACCCGCACC...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATATTCTCTTTTCTGCCCTaGAACGGGTGCTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIFSFLP*NGCWGG
Trigger: GCCGCCCCAGCACCCGTTGCAGGGCAGAAAAGAGAA...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATTTCTCTTTTCTGCCCTaGAACGGGTGCTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHFSFLP*NGCWGG
Trigger: GCCGCCCCAGCACCCGTTGCAGGGCAGAAAAGAGAA...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCGCAGAGGTATTTTCTTaGATTTCTGTGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTAEVFS*ISVSWT
Trigger: TGTCCAACTCACAGAAATGCAAGAAAATACCTCTGC...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATCAACCTTTGGCATATaGCTGCTACTAGGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLSTFGI*LLLGGL
Trigger: TAAGCCACCTAGTAGCAGGCATATGCCAAAGGTTGA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAAAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEKGPGP*LENAGP
Trigger: GGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTT...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCACTTTACCTCCAGTATaGCACTTTGGGTTCAATTCA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTTLPPV*HFGFNS
Trigger: TGAATTGAACCCAAAGTGCCATACTGGAGGTAAAGT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCGCACCCTATCAGTTATaGCAATCAAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTAPYQL*QSKMSP
Trigger: TGGAGACATTTTTGATTGCCATAACTGATAGGGTGC...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGGGTGGGGGTGCGGGTaGGAGCTGACCTGTGCATTA +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQGWGCG*ELTCAL
Trigger: TAATGCACAGGTCAGCTCCCACCCGCACCCCCACCC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATGGAGGTCGAGGCGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCGCCTCGACCTCC...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTGTAATCCCAACACTTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIVIPTL*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAAGTGTTGGGATTAC...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGAGGGACAAAGAGCTGTaGTTTCTAAGTGGGCTATAT +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERRDKEL*FLSGLY
Trigger: ATATAGCCCACTTAGAAATCACAGCTCTTTGTCCCT...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000470669.5
CDS-3UTR TCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTGTTTGTGGATGGGGATaGGCAGCACCAGATGTCACA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCVCGWG*AAPDVT
Trigger: TGTGACATCTGGTGCTGCTCATCCCCATCCACAAAC...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATTGGCCAGAACAGCATTaGGGACCATATTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHWPEQH*GPYCSW
Trigger: CCAACTGCAATATGGTCCTCAATGCTGTTCTGGCCA...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAGGTGCGGGTGGGAGCTaGCCTGTGCATTACAGAATG +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAGAGGS*PVHYRM
Trigger: CATTCTGTAATGCACAGGTCAGCTCCCACCCGCACC...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAATGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKWQFSD*RKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCA...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAACTCTCTTCTCTTTTCTaGCCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKLSSLF*PATGAG
Trigger: CCCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAG...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATAAAAGGGGAAGCCATTaGAGTGGTACCCATGACCCA +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHKRGSH*SGTHDP
Trigger: TGGGTCATGGGTACCACTGCAATGGCTTCCCCTTTT...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAKGPGP*LENAGP
Trigger: GGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTT...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIKGPGP*LENAGP
Trigger: GGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTACTCTCTACAAGTGTCTaGCAGAGGTATTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLLSTSV*QRYFLA
Trigger: TGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAG...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAAATTCTTGGTAGGGGGTaGGGGTGCGGGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKILGRG*GCGWEL
Trigger: CAGCTCCCACCCGCACCCCCACCCCCTACCAAGAAT...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTGACATTCCGTTAAGGTaGAGTGAAGGAGGAATCACC +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTDIPLR*SEGGIT
Trigger: GGTGATTCCTCCTTCACTTCACCTTAACGGAATGTC...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATTTGGCATTAGTCATTaGAATGGCCAGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLFGISH*NGQNSI
Trigger: AATGCTGTTCTGGCCATTTCAATGACTAATGCCAAA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTTGGCATTAGTCATTaGAATGGCCAGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERFGISH*NGQNSI
Trigger: AATGCTGTTCTGGCCATTTCAATGACTAATGCCAAA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTATGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PKTSLNGILCNGADILGVWQFSD*RKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCA...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATATGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIWQFSD*RKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCA...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCATGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAWQFSD*RKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCA...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTTCTCTTTTCTGCCCTaGAACGGGTGCTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTFSFLP*NGCWGG
Trigger: GCCGCCCCAGCACCCGTTGCAGGGCAGAAAAGAGAA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATACTCTCTTCTCTTTTCTaGCCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSILSSLF*PATGAG
Trigger: CCCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAG...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTAGGTATCTCCATGAATTaGTCTAAAGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLGISMN*SKGGMI
Trigger: AATCATGCCACCTTTAGAGCAATTCATGGAGATACC...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTDALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAAGCTGGTGAGGTAGAATaGCTCACAGAACCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEAGEVE*LTEPGS
Trigger: GGAACCAGGTTCTGTGAGGCATTCTACCTCACCAGC...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSISKDDP*QFSDCR
Trigger: GCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAGAGGCTACGGAAGTGTaGATTGTCCTGCTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKEATEV*IVLLFA
Trigger: AGCGAACAGCAGGACAATCCACACTTCCGTAGCCTC...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGACTTTACCTCCAGTATaGCACTTTGGGTTCAATTCA +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERTLPPV*HFGFNS
Trigger: TGAATTGAACCCAAAGTGCCATACTGGAGGTAAAGT...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTTCCAAAAGCATCTTaGCAGGTATACTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERFPKAS*QVYLST
Trigger: TGTGCTCAAGTATACCTGCCAAGATGCTTTTGGAAA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCCAGGACTATCCATCTTaGGCAAAGTATCTTAATATA +
Preference number: 4 (lower is better)
Translates to: VRVGADLCITECLRASLTQDYPS*AKYLNI
Trigger: TATATTAAGATACTTTGCCCAAGATGGATAGTCCTG...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATACTGCGAGAAGACTCTaGACGGTTCCTCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHTARRL*TVPLMF
Trigger: AAACATAAGAGGAACCGTTCAGAGTCTTCTCGCAGT...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATTCCGTTAAGGTGAAGTaGAGGAGGAATCACCATGTT +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHSVKVK*RRNHHV
Trigger: AACATGGTGATTCCTCCTTCACTTCACCTTAACGGA...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATTTGCAGTGGTACCCATaGCCCAGAGTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHLQWYP*PRVQER
Trigger: CCTTTCTTGCACTCTGGGTCATGGGTACCACTGCAA...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTGTGGTTCAGATAAATaGTACAATAATCTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERCGSDK*YNNLGY
Trigger: GTAGCCGAGATTATTGTATCATTTATCTGAACCACA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATGTGGTTCAGATAAATaGTACAATAATCTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: ALDECLLELREDSERFLLCGSDK*YNNLGY
Trigger: GTAGCCGAGATTATTGTATCATTTATCTGAACCACA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGCTAAACGCAGCTTCTaGGCTTACTGCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQAKRSF*AYCHSP
Trigger: AGGGGAGTGGCAGTAAGCTCAGAAGCTGCGTTTAGC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIKCGLS*CSLRSR
Trigger: TCTACTTCGGAGCGAACAGCAGGACAATCCACACTT...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCDALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATTACTGTAACCTATCCTaGTTCCCCAGTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHYCNLS*FPSSFS
Trigger: GGAGAAACTACTGGGGAAGCAGGATAGGTTACAGTA...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAGAGGCTACGGAAGTGTaGATTGTCCTGCTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIEATEV*IVLLFA
Trigger: AGCGAACAGCAGGACAATCCACACTTCCGTAGCCTC...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTGAGGCTACGGAAGTGTaGATTGTCCTGCTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIEATEV*IVLLFA
Trigger: AGCGAACAGCAGGACAATCCACACTTCCGTAGCCTC...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGGCTACCTCTAGTTCATaGTTTCTTCACCTGATTATT +
Preference number: 4 (lower is better)
Translates to: FEDALDECLLELREDSERATSSS*FLHLII
Trigger: AATAATCAGGTGAAGAAACCATGAACTAGAGGTAGC...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATTTCTTATGCCTTTTGTaGCCAGAAGAGGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHFLCLL*PEEEED
Trigger: ATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAA...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTACTGCGAGAAGACTCTaGACGGTTCCTCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASITARRL*TVPLMF
Trigger: AAACATAAGAGGAACCGTTCAGAGTCTTCTCGCAGT...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGTTTGTGGATGGGGATaGGCAGCACCAGATGTCACA +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQVCGWG*AAPDVT
Trigger: TGTGACATCTGGTGCTGCTCATCCCCATCCACAAAC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAACTTGGCAGGTATACTTaGGCACAACTGCATGCAAAG +
Preference number: 4 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKLGRYT*AQLHAK
Trigger: CTTTGCATGCAGTTGTGCTCAAGTATACCTGCCAAG...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACCCTCACCACGTCCACTaGTACCTCTTTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHPHHVH*YLFEHL
Trigger: TAAATGCTCAAAGAGGTATCAGTGGACGTGGTGAGG...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACACAGGCACTCGACAGTaGAAGTATGAATCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHTGTRQ*KYESQA
Trigger: TGCTTGGGATTCATACTTTCACTGTCGAGTGCCTGT...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTWQFSD*RKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAAAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEKCGLS*CSLRSR
Trigger: TCTACTTCGGAGCGAACAGCAGGACAATCCACACTT...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTCTCTCTTCTCTTTTCTaGCCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTLSSLF*PATGAG
Trigger: CCCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAG...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGCTGGTGAGGTAGAATaGCTCACAGAACCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQAGEVE*LTEPGS
Trigger: GGAACCAGGTTCTGTGAGGCATTCTACCTCACCAGC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTSKDDP*QFSDCR
Trigger: GCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGAGGCTACGGAAGTGTaGATTGTCCTGCTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQEATEV*IVLLFA
Trigger: AGCGAACAGCAGGACAATCCACACTTCCGTAGCCTC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTCTCTCTACAAGTGTCTaGCAGAGGTATTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTLSTSV*QRYFLA
Trigger: TGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAG...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp ATTCATAGCATCCACATGGCGTCCAACTTTAAAATAGTCAACTCCGATCTTCACCCAAGGAACTCTGCATaGCATTTTCATAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: IHSIHMASNFKIVNSDLHPRNSA*HFHRTP
Trigger: TGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGG...GTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIKCGLS*CSLRSR
Trigger: TCTACTTCGGAGCGAACAGCAGGACAATCCACACTT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTAATGCCTTCTGGAACTaGGAGAAGACTCTGAACGGT +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQINAFWN*EKTLNG
Trigger: ACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATT...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEADALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATACTGTAACCTATCCTaGTTCCCCAGTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEYCNLS*FPSSFS
Trigger: GGAGAAACTACTGGGGAAGCAGGATAGGTTACAGTA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTGTGGGAGCTGACCTGTaGATTACAGAATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCVGADL*ITECLR
Trigger: TCTTAAACATTCTGTAATGCACAGGTCAGCTCCCAC...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTGAGGCTACGGAAGTGTaGATTGTCCTGCTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTEATEV*IVLLFA
Trigger: AGCGAACAGCAGGACAATCCACACTTCCGTAGCCTC...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTTCCAGTATGGCACTTTaGGTTCAATTCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCSSMAL*VQFSSC
Trigger: GCAACTACTGAATTGAACCCAAAGTGCCATACTGGA...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGCACCCTATCAGTTATaGCAATCAAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHAPYQL*QSKMSP
Trigger: TGGAGACATTTTTGATTGCCATAACTGATAGGGTGC...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAACCCAAAAACCAGAAATaGAGGGAGAAACTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEPKNQK*REKLGN
Trigger: GTTACCCAGTTTCTCCCTCCATTTCTGGTTTTTGGG...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAAGAAGATGGGATCACCTaGTTCATTCAACCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEEDGIT*FIQPLA
Trigger: TGCCAAAGGTTGAATGAACCAGGTGATCCCATCTTC...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATGTCCAGTCCAGAAGATaGGATCACCTGGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHVQSRR*DHLVHS
Trigger: TGAATGAACCAGGTGATCCCATCTTCTGGACTGGAC...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTAGTTGCAGGTGCATCTaGTTTCCAGGAAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQISCRCI*FPGKCK
Trigger: TTTGCACTTTCCTGGAAATCAGATGCACCTGCAACT...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAGTTGCAGGTGCATCTaGTTTCCAGGAAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSISCRCI*FPGKCK
Trigger: TTTGCACTTTCCTGGAAATCAGATGCACCTGCAACT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR TCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTCCAAGGAACTCTGCATaGCATTTTCATAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIPRNSA*HFHRTP
Trigger: TGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGG...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCACCAAGGAACTCTGCATaGCATTTTCATAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAPRNSA*HFHRTP
Trigger: TGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGG...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATTCTTATGCCTTTTGTaGCCAGAAGAGGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEFLCLL*PEEEED
Trigger: ATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATCTACTGAAATCACGTaGTCCAGAGTGAGCGTATTT +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIESTEIT*SRVSVF
Trigger: AAATACGCTCACTCTGGATCACGTGATTTCAGTAGA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCATCCGTTAAGGTGAAGTaGAGGAGGAATCACCATGTT +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEASVKVK*RRNHHV
Trigger: AACATGGTGATTCCTCCTTCACTTCACCTTAACGGA...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAATGGCCAGAACAGCATTaGGGACCATATTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKWPEQH*GPYCSW
Trigger: CCAACTGCAATATGGTCCTCAATGCTGTTCTGGCCA...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTCCATTATACACTAGATaGAGTAGCACCCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCPLYTR*SSTLSV
Trigger: AACTGATAGGGTGCTACTGCATCTAGTGTATAATGG...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTCAGACACAGCAGCAATaGTCCAATTCAGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIQTQQQ*SNSEEN
Trigger: ATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTG...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTACTTTACCTCCAGTATaGCACTTTGGGTTCAATTCA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCTLPPV*HFGFNS
Trigger: TGAATTGAACCCAAAGTGCCATACTGGAGGTAAAGT...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTGCACCCTATCAGTTATaGCAATCAAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCAPYQL*QSKMSP
Trigger: TGGAGACATTTTTGATTGCCATAACTGATAGGGTGC...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGCTACCTCTAGTTCATaGTTTCTTCACCTGATTATT +
Preference number: 4 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHATSSS*FLHLII
Trigger: AATAATCAGGTGAAGAAACCATGAACTAGAGGTAGC...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATGGTTCATTCAACCTTTaGCATATGCCTGCTACTAGG +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHGSFNL*HMPATR
Trigger: CCTAGTAGCAGGCATATGCCAAAGGTTGAATGAACC...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAGGGACAAAGAGCTGTaGTTTCTAAGTGGGCTATAT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIRDKEL*FLSGLY
Trigger: ATATAGCCCACTTAGAAATCACAGCTCTTTGTCCCT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462895.1
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATATTCTTATGCCTTTTGTaGCCAGAAGAGGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIFLCLL*PEEEED
Trigger: ATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAA...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCATCTACTGAAATCACGTaGTCCAGAGTGAGCGTATTT +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEASTEIT*SRVSVF
Trigger: AAATACGCTCACTCTGGATCACGTGATTTCAGTAGA...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAAAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTTTAAAAACCACCAGGTaGGCTCCCTATAAGGACATT +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQILKTTR*APYKDI
Trigger: AATGTCCTTATAGGGAGCTCACCTGGTGGTTTTTAA...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTGACATTCCGTTAAGGTaGAGTGAAGGAGGAATCACC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTDIPLR*SEGGIT
Trigger: GGTGATTCCTCCTTCACTTCACCTTAACGGAATGTC...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTKCGLS*CSLRSR
Trigger: TCTACTTCGGAGCGAACAGCAGGACAATCCACACTT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAATGCCTTCTGGAACTaGGAGAAGACTCTGAACGGT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTNAFWN*EKTLNG
Trigger: ACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTGATGCCCTAGATGAATaGCTTCTGGAACTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTDALDE*LLELRE
Trigger: TTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATC...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAGTGGGAGCTGACCTGTaGATTACAGAATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAVGADL*ITECLR
Trigger: TCTTAAACATTCTGTAATGCACAGGTCAGCTCCCAC...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTTTGAGCACAACTGCATaGAAAGATATAGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASILSTTA*KDIVLA
Trigger: TGCAAGAACTATATCTTTGCATGCAGTTGTGCTCAA...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTACTCTCTACAAGTGTCTaGCAGAGGTATTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PKTSLNGILCNGADILGVLSTSV*QRYFLA
Trigger: TGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAG...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTCATTTTCCAGTTTGTaGATGGGGATGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHSFSSL*MGMSST
Trigger: GGTGCTGCTCATCCCCATCCACAAACTGGAAAATGA...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTAATGGAGGGAGAAACTaGGTAACTTACACTAATTTT +
Preference number: 4 (lower is better)
Translates to: WLRMVKYVLQLNAASELTNGGRN*VTYTNF
Trigger: AAAATTAGTGTAAGTTACCCAGTTTCTCCCTCCATT...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAGTTGCAGGTGCATCTaGTTTCCAGGAAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTSCRCI*FPGKCK
Trigger: TTTGCACTTTCCTGGAAATCAGATGCACCTGCAACT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAACAGATCAACACCATaGAAAAACCGAATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSINRSTP*KNRIPE
Trigger: TTCGGGAATTCGGTTTTTTCATGGTGTTGATCTGTT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAAACAGATCAACACCATaGAAAAACCGAATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEANRSTP*KNRIPE
Trigger: TTCGGGAATTCGGTTTTTTCATGGTGTTGATCTGTT...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTCCAAGGAACTCTGCATaGCATTTTCATAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTPRNSA*HFHRTP
Trigger: TGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGG...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTACTGCGAGAAGACTCTaGACGGTTCCTCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTTARRL*TVPLMF
Trigger: AAACATAAGAGGAACCGTTCAGAGTCTTCTCGCAGT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAAAAACAGAGGCACTATaGAGCAATGTCAAACCCAAT +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAKTEAL*SNVKPN
Trigger: ATTGGGTTTGACATTGCTTCATAGTGCCTCTGTTTT...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAGCCCAGTTGGATGCATaGTTACATAGGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIAQLDA*LHRKSF
Trigger: AAATGATTTCCTATGTAATCATGCATCCAACTGGGC...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATGCCCAGTTGGATGCATaGTTACATAGGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHAQLDA*LHRKSF
Trigger: AAATGATTTCCTATGTAATCATGCATCCAACTGGGC...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAACTAATCACCTCGAATaGTGTCACCAGTTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSITNHLE*CHQFGN
Trigger: ATTACCAAACTGGTGACATCATTCGAGGTGATTAGT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAGGTATCTCCATGAATTaGTCTAAAGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: GREELYRDTASFSWYLSIGISMN*SKGGMI
Trigger: AATCATGCCACCTTTAGAGCAATTCATGGAGATACC...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR GCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATGGTATCTCCATGAATTaGTCTAAAGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHGISMN*SKGGMI
Trigger: AATCATGCCACCTTTAGAGCAATTCATGGAGATACC...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTCTTCAGAGAAATTTTTaGTTTGTAGGCCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: TPNEKPNLVKPNHHRASILQRNF*FVGLSL
Trigger: TAATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAG...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412756.6
CDS-3UTR GCA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTCTTCAGAGAAATTTTTaGTTTGTAGGCCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCLQRNF*FVGLSL
Trigger: TAATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAG...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000470669.5
CDS-3UTR GCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAGCAGAGGTATTTTCTTaGATTTCTGTGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: PKTSLNGILCNGADILGVAEVFS*ISVSWT
Trigger: TGTCCAACTCACAGAAATGCAAGAAAATACCTCTGC...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTGCAGAGGTATTTTCTTaGATTTCTGTGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIAEVFS*ISVSWT
Trigger: TGTCCAACTCACAGAAATGCAAGAAAATACCTCTGC...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTACTGTAACCTATCCTaGTTCCCCAGTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTYCNLS*FPSSFS
Trigger: GGAGAAACTACTGGGGAAGCAGGATAGGTTACAGTA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTACTGTAACCTATCCTaGTTCCCCAGTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHYCNLS*FPSSFS
Trigger: GGAGAAACTACTGGGGAAGCAGGATAGGTTACAGTA...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR GCA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATGTTTTGCTACTACCTaGTTGGGTTTTATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIECFATT*LGFIAV
Trigger: AACAGCTATAAAACCCAAGCAGGTAGTAGCAAAACA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATCCATTATACACTAGATaGAGTAGCACCCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHPLYTR*SSTLSV
Trigger: AACTGATAGGGTGCTACTGCATCTAGTGTATAATGG...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCACAGACACAGCAGCAATaGTCCAATTCAGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAQTQQQ*SNSEEN
Trigger: ATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTG...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGAACAGATCAACACCATaGAAAAACCGAATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQNRSTP*KNRIPE
Trigger: TTCGGGAATTCGGTTTTTTCATGGTGTTGATCTGTT...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAGGGACAAAGAGCTGTaGTTTCTAAGTGGGCTATAT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTRDKEL*FLSGLY
Trigger: ATATAGCCCACTTAGAAATCACAGCTCTTTGTCCCT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296015.9
ENST00000412756.6
CDS-3UTR TCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAAAGGGACAAAGAGCTGTaGTTTCTAAGTGGGCTATAT +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKRDKEL*FLSGLY
Trigger: ATATAGCCCACTTAGAAATCACAGCTCTTTGTCCCT...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000470669.5
CDS-3UTR TCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATATAAATCTTGTCCTCTaGATTCCTACAGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHINLVL*IPTEGI
Trigger: GATTCCTTCTGTAGGAATTCAGAGGACAAGATTTAT...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTCTACTGAAATCACGTaGTCCAGAGTGAGCGTATTT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTSTEIT*SRVSVF
Trigger: AAATACGCTCACTCTGGATCACGTGATTTCAGTAGA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTTGTGGTTCAGATAAATaGTACAATAATCTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQICGSDK*YNNLGY
Trigger: GTAGCCGAGATTATTGTATCATTTATCTGAACCACA...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTCCAGTATGGCACTTTaGGTTCAATTCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHSSMAL*VQFSSC
Trigger: GCAACTACTGAATTGAACCCAAAGTGCCATACTGGA...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAATCCAGTATGGCACTTTaGGTTCAATTCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKSSMAL*VQFSSC
Trigger: GCAACTACTGAATTGAACCCAAAGTGCCATACTGGA...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTATCTGCCTGGATAGATaGCAAATACCCAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIICLDR*QIPNLL
Trigger: TAAAAGATTGGGTATTTGCCATCTATCCAGGCAGAT...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTAACAGATCAACACCATaGAAAAACCGAATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTNRSTP*KNRIPE
Trigger: TTCGGGAATTCGGTTTTTTCATGGTGTTGATCTGTT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACGCCCAGTTGGATGCATaGTTACATAGGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHAQLDA*LHRKSF
Trigger: AAATGATTTCCTATGTAATCATGCATCCAACTGGGC...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTCCACTGATACCTCTTTaGGCATTTAGAAAAGAACAC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTPLIPL*AFRKEH
Trigger: GTGTTCTTTTCTAAATGCTCAAAGAGGTATCAGTGG...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACACTAATCACCTCGAATaGTGTCACCAGTTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHTNHLE*CHQFGN
Trigger: ATTACCAAACTGGTGACATCATTCGAGGTGATTAGT...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR TCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAATCGACAGTGAAAGTATaGATCCCAAGCAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKSTVKV*IPSKKS
Trigger: AGATTTCTTGCTTGGGATTCATACTTTCACTGTCGA...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTGGTATCTCCATGAATTaGTCTAAAGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTGISMN*SKGGMI
Trigger: AATCATGCCACCTTTAGAGCAATTCATGGAGATACC...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTGCAGAGGTATTTTCTTaGATTTCTGTGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTAEVFS*ISVSWT
Trigger: TGTCCAACTCACAGAAATGCAAGAAAATACCTCTGC...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGTGTTTTGCTACTACCTaGTTGGGTTTTATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQCFATT*LGFIAV
Trigger: AACAGCTATAAAACCCAAGCAGGTAGTAGCAAAACA...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATATACTTGAGCACAACTaGATGCAAAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHILEHN*MQRYSS
Trigger: AGAACTATATCTTTGCATGCAGTTGTGCTCAAGTAT...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CCA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTACTTTACTTTCGATTATaGACAAAAACAGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: PKTSLNGILCNGADILGVLYFRL*TKTEAL
Trigger: TAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAG...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTCTTTACTTTCGATTATaGACAAAAACAGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: KPPGELPIRTFLKTTYQILYFRL*TKTEAL
Trigger: TAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAG...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AATAGTTTTCTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACCAGACACAGCAGCAATaGTCCAATTCAGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSFLTAIFTFDYGQKQRHQTQQQ*SNSEEN
Trigger: ATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTG...GTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAGAAAACTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CCA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGGCTACCTCTAGTTCATaGTTTCTTCACCTGATTATT +
Preference number: 4 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQATSSS*FLHLII
Trigger: AATAATCAGGTGAAGAAACCATGAACTAGAGGTAGC...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR TCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTATAAATCTTGTCCTCTaGATTCCTACAGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTINLVL*IPTEGI
Trigger: GATTCCTTCTGTAGGAATTCAGAGGACAAGATTTAT...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTGTTTTGCTACTACCTaGTTGGGTTTTATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTCFATT*LGFIAV
Trigger: AACAGCTATAAAACCCAAGCAGGTAGTAGCAAAACA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CCA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAAGCATCCTTCTCTACTTaGTTACATGGTACACATATT +
Preference number: 4 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKASFST*LHGTHI
Trigger: AATATGTGTACCATGTAACCAAGTAGAGAAGGATGC...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR GCA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTCTTCAGAGAAATTTTTaGTTTGTAGGCCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTLQRNF*FVGLSL
Trigger: TAATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAG...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296015.9
ENST00000412756.6
CDS GCA 90 bp GGCTCGGCGGCCGACCCCAGGAGGCTACGGAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGAGAGAGCAAAGACGACCCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSAADPRRLRKCGLS*CSLRSRESKDDPWQ
Trigger: TTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCGAACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGCCGCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CCA 90 bp ACGACCCGTGGCAATTTAGCGACTGCCGCAAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCCGGAGGCCGACGGGCTGATAGTTCC +
Preference number: 5 (lower is better)
Translates to: TTRGNLATAAKGPGP*LENAGPGGRRADSS
Trigger: GGAACTATCAGCCCGTCGGCCTCCGGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS GCA 90 bp CTCCGAAGTAGAGAGAGCAAAGACGACCCGTGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCCATGGCTAGAGAATGCAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LRSRESKDDPWQFSD*RKRSRSMARECRAR
Trigger: CCGGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CCA 90 bp TTGTCCTGCTGTTCGCTCCGAAGTAGAGAGAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGCAAAAGGTCCCGGTCCATGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LSCCSLRSRESKDDP*QFSDCRKRSRSMAR
Trigger: TCTAGCCATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCGAACAGCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGCTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERLRKCG*SCCSLR
Trigger: TCGGAGCGAACAGCAGGACAATCCACACTTCCGTAG...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAAATCATTTTCCAGTTaGTGGATGGGGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VRVGADLCITECLRASLTKSFSS*WMGMSS
Trigger: GCTGCTCATCCCCATCCACAAACTGGAAAATGATTT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTTGTAATCCCAACACTTaGGGAGGTCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCCNPNT*GGRGGW
Trigger: CCACCCGCCTCGACCTCCCAAAGTGTTGGGATTACA...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATTCCGTGTCCGCTACTaGAGCCGGGTGGTACAGGAA +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEFRVRY*SRVVQE
Trigger: TTCCTGTACCACCCGGCTCAAGTAGCGGACACGGAA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296015.9
CDS-3UTR CAA 90 bp GTGCGGGTGGGAGCTGACCTGTGCATTACAGAATGTTTAAGAGCATCCCTGACCAGCAGATCCGCTTTTTaGGAGATGAATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: VRVGADLCITECLRASLTSRSAF*EMNFCI
Trigger: GATACAGAAATTCATCTCCAAAAAAGCGGATCTGCT...GGTCAGGGATGCTCTTAAACATTCTGTAATGCACAGGTCAGCTCCCACCCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGAAATCATTTTCCAGTTaGTGGATGGGGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERKSFSS*WMGMSS
Trigger: GCTGCTCATCCCCATCCACAAACTGGAAAATGATTT...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTCTTGGCAGGTATACTaGAGCACAACTGCATGCAAA +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERSWQVY*STTACK
Trigger: TTTGCATGCAGTTGTGCTCAAGTATACCTGCCAAGA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAACTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIELRKCG*SCCSLR
Trigger: TCGGAGCGAACAGCAGGACAATCCACACTTCCGTAG...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAACTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKLRKCG*SCCSLR
Trigger: TCGGAGCGAACAGCAGGACAATCCACACTTCCGTAG...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATACTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: GREELYRDTASFSWYLSILRKCG*SCCSLR
Trigger: TCGGAGCGAACAGCAGGACAATCCACACTTCCGTAG...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTGTTCAAACTTCCTTTaGTCGCATATAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERCSNFL*SHIMLH
Trigger: GTGGAGCATTATATGCGACAAAAGGAAGTTTGAACA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATGTTCAAACTTCCTTTaGTCGCATATAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALDECLLELREDSERFLLCSNFL*SHIMLH
Trigger: GTGGAGCATTATATGCGACAAAAGGAAGTTTGAACA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTCTTCAGAGAAATTTTaGCTTTGTAGGCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERSSEKF*LCRPLI
Trigger: AATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAGA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000470669.5
CDS-3UTR CAA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGGCAGAGGTATTTTCTaGCATTTCTGTGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHGRGIF*HFCELD
Trigger: GTCCAACTCACAGAAATGCAAGAAAATACCTCTGCC...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp GCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTCCTCTTATTTGCTACTACCTGCTaGGGTTTTATAGCTGTTATA +
Preference number: 5 (lower is better)
Translates to: ALDECLLELREDSERFLLFATTC*GFIAVI
Trigger: TATAACAGCTATAAAACCCAAGCAGGTAGTAGCAAA...TAAGAGGAACCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp TTTGAGGATGCCCTAGATGAATGCCTTCTGGAACTGCGAGAAGACTCTGAACGGTTTGCTACTACCTGCTaGGGTTTTATAGCTGTTATA +
Preference number: 5 (lower is better)
Translates to: FEDALDECLLELREDSERFATTC*GFIAVI
Trigger: TATAACAGCTATAAAACCCAAGCAGGTAGTAGCAAA...CCGTTCAGAGTCTTCTCGCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATTATCTGTCAATATCCTaGATTCCAGCTCGAATGATG +
Preference number: 5 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHYLSIS*IPARMM
Trigger: CATCATTCGAGCTGGAATCAAGGATATTGACAGATA...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000470669.5
CDS-3UTR CAA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATCAAAGCTTCCACGTTTaGTTTGTCTATTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHQSFHV*FVYFQS
Trigger: GCTTTGGAAATAGACAAACAAAACGTGGAAGCTTTG...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp AGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAAAATCATTTTCCAGTTaGTGGATGGGGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RCHRHSSNGPIQKKMHEKKSFSS*WMGMSS
Trigger: GCTGCTCATCCCCATCCACAAACTGGAAAATGATTT...TTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTGCATTGAGGACCATATaGCAGTTGGTATCCCATAAA +
Preference number: 5 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIALRTI*QLVSHK
Trigger: TTTATGGGATACCAACTGCAATATGGTCCTCAATGC...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp TTACATAGGAAATCATTTTCCAGTTTGTGGATGGGGATGAGCAGCACCAGATGTAGCAGATCCGCTTTTTaGGAGATGAATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: LHRKSFSSLWMGMSSTRCSRSAF*EMNFCI
Trigger: GATACAGAAATTCATCTCCAAAAAAGCGGATCTGCT...ACATCTGGTGCTGCTCATCCCCATCCACAAACTGGAAAATGATTTCCTATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp ACCCCCAACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTCAAAGCTTCCACGTTTaGTTTGTCTATTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: TPNEKPNLVKPNHHRASIQSFHV*FVYFQS
Trigger: GCTTTGGAAATAGACAAACAAAACGTGGAAGCTTTG...AATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTTGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAGGCAGAGGTATTTTCTaGCATTTCTGTGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: PKTSLNGILCNGADILGVGRGIF*HFCELD
Trigger: GTCCAACTCACAGAAATGCAAGAAAATACCTCTGCC...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCAGGCAGAGGTATTTTCTaGCATTTCTGTGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAGRGIF*HFCELD
Trigger: GTCCAACTCACAGAAATGCAAGAAAATACCTCTGCC...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp AGCACCAGATGTCACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATCAGACATTTCAAGCTTaGATAAGAACAGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: STRCHRHSSNGPIQKKMHQTFQA*IRTVSS
Trigger: AGAAGACACTGTTCTTATCAAAGCTTGAAATGTCTG...ATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGTGACATCTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp TGGCTTAGGATGGTAAAATACGTCCTTCAGCTAAACGCAGCTTCTGAGCTTACTAACGTTCTTCTGCCTTaGGACATTTTCACAACAAAT +
Preference number: 5 (lower is better)
Translates to: WLRMVKYVLQLNAASELTNVLLP*DIFTTN
Trigger: ATTTGTTGTGAAAATGTCCAAAGGCAGAAGAACGTT...AGTAAGCTCAGAAGCTGCGTTTAGCTGAAGGACGTATTTTACCATCCTAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAACAAAGCTTCCACGTTTaGTTTGTCTATTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEQSFHV*FVYFQS
Trigger: GCTTTGGAAATAGACAAACAAAACGTGGAAGCTTTG...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATCACTTAATGGCATTTaGTGTAATGGTGCCGATATC +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIESLNGI*CNGADI
Trigger: GATATCGGCACCATTACACAAAATGCCATTAAGTGA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAAATGGCCAGAACAGCATaGAGGACCATATTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKMARTA*RTILQL
Trigger: CAACTGCAATATGGTCCTCAATGCTGTTCTGGCCAT...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATGCATCCTTCTCTACTaGGTTACATGGTACACATAT +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIECILLY*VTWYTY
Trigger: ATATGTGTACCATGTAACCAAGTAGAGAAGGATGCA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATTCTGTATCTCGATGTaGTCAACTCTCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEFCISM*STLFSF
Trigger: AAAAGAGAAGAGAGTTGACAACATCGAGATACAGAA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTAAGCAGATCCGCTTTTTaGGAGATGAATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: PKTSLNGILCNGADILGVSRSAF*EMNFCI
Trigger: GATACAGAAATTCATCTCCAAAAAAGCGGATCTGCT...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATAAGCAGATCCGCTTTTTaGGAGATGAATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: GREELYRDTASFSWYLSISRSAF*EMNFCI
Trigger: GATACAGAAATTCATCTCCAAAAAAGCGGATCTGCT...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CAA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTAGCAGATCCGCTTTTTaGGAGATGAATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: KPPGELPIRTFLKTTYQISRSAF*EMNFCI
Trigger: GATACAGAAATTCATCTCCAAAAAAGCGGATCTGCT...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp CCAAAAACTTCACTTAATGGCATTTTGTGTAATGGTGCCGATATCCTTGGTGTATATCTGTCAATATCCTaGATTCCAGCTCGAATGATG +
Preference number: 5 (lower is better)
Translates to: PKTSLNGILCNGADILGVYLSIS*IPARMM
Trigger: CATCATTCGAGCTGGAATCAAGGATATTGACAGATA...TACACCAAGGATATCGGCACCATTACACAAAATGCCATTAAGTGAAGTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296015.9
ENST00000412756.6
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATCTTCAGAGAAATTTTaGCTTTGTAGGCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIESSEKF*LCRPLI
Trigger: AATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAGA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296015.9
ENST00000412756.6
CDS-3UTR CAA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTTGTTCAAACTTCCTTTaGTCGCATATAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: KPPGELPIRTFLKTTYQICSNFL*SHIMLH
Trigger: GTGGAGCATTATATGCGACAAAAGGAAGTTTGAACA...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp CTCTCAAACAGCAGAATAAGATGCACCCAGGAATTCTCATATACCGCAATAGAATTTGCTACTACCTGCTaGGGTTTTATAGCTGTTATA +
Preference number: 5 (lower is better)
Translates to: LSNSRIRCTQEFSYTAIEFATTC*GFIAVI
Trigger: TATAACAGCTATAAAACCCAAGCAGGTAGTAGCAAA...TTCTATTGCGGTATATGAGAATTCCTGGGTGCATCTTATTCTGCTGTTTGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AACGAGAAACCCAATTTAGTAAAACCAAATCACCATAGAGCCAGCATTAAACAGATTTCCAAAAGCATCTaGGCAGGTATACTTGAGCAC +
Preference number: 5 (lower is better)
Translates to: NEKPNLVKPNHHRASIKQISKSI*AGILEH
Trigger: GTGCTCAAGTATACCTGCCAAGATGCTTTTGGAAAT...CTGTTTAATGCTGGCTCTATGGTGATTTGGTTTTACTAAATTGGGTTTCTCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465065.5
CDS-3UTR CAA 90 bp AAACCACCAGGTGAGCTCCCTATAAGGACATTTCTCAAAACAACATACCAAATTTTCTGTATCTCGATGTaGTCAACTCTCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: KPPGELPIRTFLKTTYQIFCISM*STLFSF
Trigger: AAAAGAGAAGAGAGTTGACAACATCGAGATACAGAA...AATTTGGTATGTTGTTTTGAGAAATGTCCTTATAGGGAGCTCACCTGGTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp GGAAGAGAAGAGCTATACAGAGATACTGCTAGCTTTTCATGGTATCTGTCAATATTCTGTATCTCGATGTaGTCAACTCTCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GREELYRDTASFSWYLSIFCISM*STLFSF
Trigger: AAAAGAGAAGAGAGTTGACAACATCGAGATACAGAA...TATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462895.1
ENST00000465065.5
CDS-3UTR CAA 90 bp ACAGACACAGCAGCAATGGTCCAATTCAGAAGAAAATGCATGAGAAAACATCATTTCTGTATCTCGATGTaGTCAACTCTCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: TDTAAMVQFRRKCMRKHHFCISM*STLFSF
Trigger: AAAAGAGAAGAGAGTTGACAACATCGAGATACAGAA...ATGATGTTTTCTCATGCATTTTCTTCTGAATTGGACCATTGCTGCTGTGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp CTCACAGCTATCTTTACTTTCGATTATGGACAAAAACAGAGGCACTATGAAGCATTCTGTATCTCGATGTaGTCAACTCTCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LTAIFTFDYGQKQRHYEAFCISM*STLFSF
Trigger: AAAAGAGAAGAGAGTTGACAACATCGAGATACAGAA...TGCTTCATAGTGCCTCTGTTTTTGTCCATAATCGAAAGTAAAGATAGCTGTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412756.6
ENST00000465065.5
ENST00000470669.5
CDS-3UTR CAA 90 bp AACAGAGGCACTATGAAGCAATGTCAAACCCAATTAGGAAAAACTATACCTAAAGCATTGAGGACCATATaGCAGTTGGTATCCCATAAA +
Preference number: 5 (lower is better)
Translates to: NRGTMKQCQTQLGKTIPKALRTI*QLVSHK
Trigger: TTTATGGGATACCAACTGCAATATGGTCCTCAATGC...TTTAGGTATAGTTTTTCCTAATTGGGTTTGACATTGCTTCATAGTGCCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTGTTCAAACTTCCTTTaGTCGCATATAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTCSNFL*SHIMLH
Trigger: GTGGAGCATTATATGCGACAAAAGGAAGTTTGAACA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTCACTTAATGGCATTTaGTGTAATGGTGCCGATATC +
Preference number: 5 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTSLNGI*CNGADI
Trigger: GATATCGGCACCATTACACAAAATGCCATTAAGTGA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296015.9
ENST00000412756.6
ENST00000465065.5
CDS-3UTR CAA 90 bp AAGCAGAGATTTCTGCACTCAACTGTTATGACTAATACAACCAAAAACTTCACTTCTTCAGAGAAATTTTaGCTTTGTAGGCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: KQRFLHSTVMTNTTKNFTSSEKF*LCRPLI
Trigger: AATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAGA...AGTGAAGTTTTTGGTTGTATTAGTCATAACAGTTGAGTGCAGAAATCTCTGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296015.9
ENST00000412756.6
CDS CAA 90 bp CGGGCTGGCTCGGCGGCCGACCCCAGGAGGCTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGAAGTAGAGAGAGCAAAGACGACCCG +
Preference number: 6 (lower is better)
Translates to: RAGSAADPRRLRKCG*SCCSLRSRESKDDP
Trigger: CGGGTCGTCTTTGCTCTCTCTACTTCGGAGCGAACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGCCGCCGAGCCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CCA 72 bp GGCAATTTAGCGACTGCCGCAAAAGGTCCCGGTCCATaGCTAGAGAATGCAGGGCCCGGAGGCCGACGGGCT +
Preference number: 6 (lower is better)
Translates to: GNLATAAKGPGP*LENAGPGGRRA
Trigger: AGCCCGTCGGCCTCCGGGCCCTGCATTCTCTAGCCATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CAA 72 bp TCGGCGGCCGACCCCAGGAGGCTACGGAAGTGTGGATaGTCCTGCTGTTCGCTCCGAAGTAGAGAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: SAADPRRLRKCG*SCCSLRSRESK
Trigger: TTTGCTCTCTCTACTTCGGAGCGAACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGCCGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS GCA 72 bp GCCGACCCCAGGAGGCTACGGAAGTGTGGATTGTCCTaGTGTTCGCTCCGAAGTAGAGAGAGCAAAGACGAC +
Preference number: 6 (lower is better)
Translates to: ADPRRLRKCGLS*CSLRSRESKDD
Trigger: GTCGTCTTTGCTCTCTCTACTTCGGAGCGAACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CAA 72 bp CGACGGGCTGATAGTTCCCTGTTCCGTGTCCGCTACTaGAGCCGGGTGGTACAGGAAGCGGAAGAAACTGTC +
Preference number: 6 (lower is better)
Translates to: RRADSSLFRVRY*SRVVQEAEETV
Trigger: GACAGTTTCTTCCGCTTCCTGTACCACCCGGCTCAAGTAGCGGACACGGAACAGGGAACTATCAGCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296015.9
CDS TCA 72 bp GACGGGCTGATAGTTCCCTGTTCCGTGTCCGCTACTTaGGCCGGGTGGTACAGGAAGCGGAAGAAACTGTCT +
Preference number: 6 (lower is better)
Translates to: DGLIVPCSVSAT*AGWYRKRKKLS
Trigger: AGACAGTTTCTTCCGCTTCCTGTACCACCCGGCTCAAGTAGCGGACACGGAACAGGGAACTATCAGCCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296015.9
CDS CCA 72 bp TGTTCGCTCCGAAGTAGAGAGAGCAAAGACGACCCGTaGCAATTTAGCGACTGCCGCAAAAGGTCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: CSLRSRESKDDP*QFSDCRKRSRS
Trigger: GGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS GCA 72 bp AGAGAGAGCAAAGACGACCCGTGGCAATTTAGCGACTaGCGCAAAAGGTCCCGGTCCATGGCTAGAGAATGC +
Preference number: 6 (lower is better)
Translates to: RESKDDPWQFSD*RKRSRSMAREC
Trigger: GCATTCTCTAGCCATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296015.9
ENST00000382584.8
ENST00000412756.6
ENST00000462895.1
ENST00000465065.5
ENST00000470669.5
ENST00000491380.5
CDS CAA 90 bp CCCGTGGTCAGGATCATCAATACCACTGTCTTCCACCTCCATATCTaGTCCCACTTGAAGGTCTTCAGGGTCAGTAACATGAATGGAGCT +
Preference number: 6 (lower is better)
Translates to: PVVRIINTTVFHLHI*SHLKVFRVSNMNGA
Trigger: AGCTCCATTCATGTTACTGACCCTGAAGACCTTCAAGTGGGACAAGATATGGAGGTGGAAGACAGTGGTATTGATGATCCTGACCACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382584.8