RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC13 (Homo sapiens)

Ensembl gene IDs: ENSG00000143643

Ensembl transcript IDs: ENST00000366661.9, ENST00000366662.8, ENST00000466507.2, ENST00000481976.6, ENST00000486879.2, ENST00000519379.1, ENST00000522399.1, ENST00000522821.5

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTaGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGAACAG +
Preference number: 1 (lower is better)
Translates to: SSQRGQNFCSLLKYL*TIWFQGNYSAQFEQ
Trigger: CTGTTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR CCA 90 bp AGGGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTGGACGATCTaGTTCCAAGGTAATTACTCGGCTCAGTTCGAACAGAGCAAGCTC +
Preference number: 1 (lower is better)
Translates to: RGQNFCSLLKYLWTI*FQGNYSAQFEQSKL
Trigger: GAGCTTGCTCTGTTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR TCA 90 bp CTGGCAAGTACTGTCTGCATTGTTCAAAATAAGTGTTCCTGGCTGTaGGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATG +
Preference number: 1 (lower is better)
Translates to: LASTVCIVQNKCSWL*ALQHILMAQEPSSM
Trigger: CATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAACACTTATTTTGAACAATGCAGACAGTACTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR-3UTR GCA 90 bp GGCTCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGAAAGCTCTCAGTGGCTaGTTCAAAATTGCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: GSSCRHRLKFLRASCKLPKALSG*FKIAQF
Trigger: GAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTT...CGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
3UTR-3UTR TCA 90 bp ATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGTAGTGCAATAGCAGCCGTGTaGTCGTGGGGACCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: ITRLSSNRASSAFLMSCSAIAAV*SWGPQS
Trigger: TGACTGAGGTCCCCACGATCACACGGCTGCTATTGC...ACTACATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR TCA 90 bp TCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGTGGTGGAGGGTTTGCACATaGTTTTGGTTGAGCAACAGT +
Preference number: 2 (lower is better)
Translates to: SSCRHRLKFLRASCKLPWWRVCT*FWLSNS
Trigger: ACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCA...CCACGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
3UTR-3UTR GCA 90 bp TGCTCAAATACCTCTGGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGCCCTCGGCCATAAATTaGACTAACCAGATCAGGCTC +
Preference number: 2 (lower is better)
Translates to: CSNTSGRSGSKVITRLSSPSAIN*TNQIRL
Trigger: GAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGG...CGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR TCA 90 bp TTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAAGATCAGGCTCCTCCTaGAGCATTGTTGAAAAATGC +
Preference number: 2 (lower is better)
Translates to: FTASLIRPRGDRISARCSRSGSS*SIVEKC
Trigger: GCATTTTTCAACAATGCTTCAGGAGGAGCCTGATCT...TGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR GCA 90 bp GGCTATCCCTCGGCCATAAATTGCACTAACCAGATCAGGCTCCTCCTGAAGCATCATCATACAGACCACTaGCAATCAAGACATAAGCAA +
Preference number: 2 (lower is better)
Translates to: GYPSAINCTNQIRLLLKHHHTDH*QSRHKQ
Trigger: TTGCTTATGTCTTGATTGGCAGTGGTCTGTATGATG...ATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR CCA 90 bp TTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCATACCTCTGGACGATCTaGTTCCAAGGTAATTACTCG +
Preference number: 2 (lower is better)
Translates to: FTASLIRPRGDRISARCSYLWTI*FQGNYS
Trigger: CGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTA...TGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR CAA 90 bp GAGCTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTaGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTATA +
Preference number: 2 (lower is better)
Translates to: ELEGLHMILVEQQCL*KALSGCFKIAQFSI
Trigger: TATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
3UTR-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTGGGAACCAACAGGCTaGCGGCTAATACATACGCTT +
Preference number: 2 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDWEPTG*RLIHTL
Trigger: AAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CAA 90 bp GGTTCAATAATTCAGCATTTGGGACTCTGGCAAGTACTGTCTGCATaGTTCAAAATAAGTGTTCCTGGCTGTGAGCTCTGCAACACATAC +
Preference number: 2 (lower is better)
Translates to: GSIIQHLGLWQVLSA*FKISVPGCELCNTY
Trigger: GTATGTGTTGCAGAGCTCACAGCCAGGAACACTTATTTTGAACAATGCAGACAGTACTTGCCAGAGTCCCAAATGCTGAATTATTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCACATGGAGGTTACGTaGGTCAACAAAAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDHMEVT*VNKRCS
Trigger: AGAGCATCTTTTGTTGACTCACGTAACCTCCATGTG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR-3UTR GCA 90 bp GGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCAGTTCTCTATATGCCTaGCCTAGACTTTTATATGCA +
Preference number: 2 (lower is better)
Translates to: GLHMILVEQQCLLKALSGSSLYA*PRLLYA
Trigger: TGCATATAAAAGTCTAGGGCAGGCATATAGAGAACT...GCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
3UTR-3UTR CCA 90 bp TTCCAAGGTAATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATCTTCTCATAACTGTCTaGTCTTGCTTAATAAGCCTG +
Preference number: 2 (lower is better)
Translates to: FQGNYSAQFEQSKLSILNLLITV*SCLISL
Trigger: CAGGCTTATTAAGCAAGACCAGACAGTTATGAGAAG...ATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAATTACCTTGGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACAAGGAAGGAGTTATATaGCTTTATAAGTGGGAACCA +
Preference number: 2 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDKEGVI*LYKWEP
Trigger: TGGTTCCCACTTATAAAGTCATATAACTCCTTCCTT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CCA 72 bp AGGGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTaGACGATCTGGTTCCAAGGTAATTACTCGGCTCAG +
Preference number: 3 (lower is better)
Translates to: RGQNFCSLLKYL*TIWFQGNYSAQ
Trigger: CTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR GCA 72 bp TCCCTTCTTTCCATAGGCTATCCCTCGGCCATAAATTaGACTAACCAGATCAGGCTCCTCCTGAAGCATTGT +
Preference number: 3 (lower is better)
Translates to: SLLSIGYPSAIN*TNQIRLLLKHC
Trigger: ACAATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATAGCCTATGGAAAGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR GCA 72 bp GTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTaGTTCAAAATTGCCCAGTTCTCTATATGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: VEQQCLLKALSG*FKIAQFSICLP
Trigger: GGGCAGGCATATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
3UTR-3UTR CAA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATGGTCCGGCCCTTTACTaGTATAAATACAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNGPALY*YKYSSR
Trigger: TCTGCTGCTGTATTTATACAAGTAAAGGGCCGGACC...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CCA 72 bp AATTTCTGCTCGCTGCTCAAATACCTCTGGACGATCTaGTTCCAAGGTAATTACTCGGCTCAGTTCGAACAG +
Preference number: 3 (lower is better)
Translates to: NFCSLLKYLWTI*FQGNYSAQFEQ
Trigger: CTGTTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR CAA 90 bp TTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCACCTCCTGAAGCATTGTaGAAAAATGCCGTATTGCTT +
Preference number: 3 (lower is better)
Translates to: FTASLIRPRGDRISARCSPPEAL*KNAVLL
Trigger: AAGCAATACGGCATTTTTCAACAATGCTTCAGGAGG...TGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGGTCCGGCCCTTTACTaGTATAAATACAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRGPALY*YKYSSR
Trigger: TCTGCTGCTGTATTTATACAAGTAAAGGGCCGGACC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR-3UTR CAA 90 bp ATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGTAGTGCTCCTCCTGAAGCATaGTTGAAAAATGCCGTATTG +
Preference number: 3 (lower is better)
Translates to: ITRLSSNRASSAFLMSCSAPPEA*LKNAVL
Trigger: CAATACGGCATTTTTCAACAATGCTTCAGGAGGAGC...ACTACATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
3UTR TCA 72 bp TCTAATAAAACAAAGGACCCACACATGGAGGTTACGTaGGTCAACAAAAGATGCTCTATCACAATGTGCGTA +
Preference number: 3 (lower is better)
Translates to: SNKTKDPHMEVT*VNKRCSITMCV
Trigger: TACGCACATTGTGATAGAGCATCTTTTGTTGACTCACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CCA 72 bp TCTTCCATGGTTCTAATAAAACAAAGGACCCACACATaGAGGTTACGTGAGTCAACAAAAGATGCTCTATCA +
Preference number: 3 (lower is better)
Translates to: SSMVLIKQRTHT*RLRESTKDALS
Trigger: TGATAGAGCATCTTTTGTTGACTCACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGTGGGCCGGGGCCTCCTGCTaGTGCCGGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSCRHRLKFLRASCKLPWAGASC*CRCCSS
Trigger: GGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCCGGC...CCACGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATGCCGGGGCCTCCTGCTaGTGCCGGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNAGASC*CRCCSS
Trigger: GGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCCGGC...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGCCGGGGCCTCCTGCTaGTGCCGGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSAGASC*CRCCSS
Trigger: GGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCCGGC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAGCCGGGGCCTCCTGCTaGTGCCGGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTASLIRPRGDRISARCSAGASC*CRCCSS
Trigger: GGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCCGGC...TGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGGGGCCTCCTGCTGCTaGCGGTGCTGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSGASCC*RCCSSC
Trigger: GCAGGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGCGAGTAGTGCTCGGTaGCCAGGGCGCCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSASSAR*PGRLAA
Trigger: TGCGGCCAGGCGCCCTGGCCACCGAGCACTACTCGC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTGCTGCTGCCGGTGCTaGAGCTCCTGCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHCCCRC*SSCLSR
Trigger: CCTGCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCGGGGCCTCCTGCTGCTaGCGGTGCTGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVEQQCLLKALSGCFKIAGASCC*RCCSSC
Trigger: GCAGGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCC...GGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp CTCAAATACCTCTGGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGAAGCGAGTAGTGCTCGGTaGCCAGGGCGCCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LKYLWTIWFQGNYSAQFEASSAR*PGRLAA
Trigger: TGCGGCCAGGCGCCCTGGCCACCGAGCACTACTCGC...TTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp CAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTGCGAGTAGTGCTCGGTaGCCAGGGCGCCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: QQCLLKALSGCFKIAQFSASSAR*PGRLAA
Trigger: TGCGGCCAGGCGCCCTGGCCACCGAGCACTACTCGC...AGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGCTGCACGGCTTGCATaGCCTCCAATGCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHAARLA*PPMRPN
Trigger: GTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGC...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGCAGCAGCCGGCAGGTaGCATCTTCCCTCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSAAAGR*HLPSRR
Trigger: GCGCCTTGAGGGAAGATGGCACCTGCCGGCTGCTGC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTCCTGCTGCTGCCGGTaGTGCAGCTCCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSCCCR*CSSCLS
Trigger: GCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCAGGA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GGTAATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGGGGGCCTCCTGCTGCTaGCGGTGCTGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GNYSAQFEQSKLSILNVMGASCC*RCCSSC
Trigger: GCAGGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCC...CATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAATTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTCTGTACAGCCGTGCTaGGGGCTGCAGTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSVQPC*GLQLDS
Trigger: GCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GTGGTGGTAGAGCATCATTCCCCGGAGCTGGAGGGTTTGCACATGATTTTGGTTTCTGTACAGCCGTGCTaGGGGCTGCAGTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: VVVEHHSPELEGLHMILVSVQPC*GLQLDS
Trigger: GCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGA...AACCAAAATCATGTGCAAACCCTCCAGCTCCGGGGAATGATGCTCTACCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp TTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCGCAGCAGCCGGCAGGTaGCATCTTCCCTCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: LHMILVEQQCLLKALSGCAAAGR*HLPSRR
Trigger: GCGCCTTGAGGGAAGATGGCACCTGCCGGCTGCTGC...GCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp ATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCTGCTGCTGCCGGTGCTaGAGCTCCTGCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IHCFINSSQRGQNFCSLLCCCRC*SSCLSR
Trigger: CCTGCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCA...GAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp GAGGTCATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGTCCTGCTGCTGCCGGTaGTGCAGCTCCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EVIHCFINSSQRGQNFCSSCCCR*CSSCLS
Trigger: GCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCAGGA...CGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAATGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGGGGCCTCCTGCTGCTaGCGGTGCTGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQGASCC*RCCSSC
Trigger: GCAGGAGCTGCAGCACCGGCAGCAGCAGGAGGCCCC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GAGCTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTTTCCCTCAAGGCGCATaGGCGACAGCCCTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ELEGLHMILVEQQCLLKAFPQGA*ATALAR
Trigger: CCGGGCAAGGGCTGTCGCGCATGCGCCTTGAGGGAA...AGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGCGAGTAGTGCTCGGTaGCCAGGGCGCCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRASSAR*PGRLAA
Trigger: TGCGGCCAGGCGCCCTGGCCACCGAGCACTACTCGC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTCTGTACAGCCGTGCTaGGGGCTGCAGTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSVQPC*GLQLDS
Trigger: GCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTTGGTCCATGTACGCTaGACGGCTTGCATGACCTCC +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHLVHVR*TACMTS
Trigger: GGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCCAGCACGGGCTGGTCTaGGTCAGCAATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVQHGLV*VSNPSP
Trigger: TGGAGAAGGATTGCTGACCCAGACCAGCCCGTGCTG...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTCCACTTGCCATCAGTaGTCCCACGATGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSTCHQ*SHDDRV
Trigger: TACTCGGTCATCGTGGGAGCACTGATGGCAAGTGGA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATCTCTGCAACACATACTaGTGGCCCAGGAACCTTCTT +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHLCNTY*WPRNLL
Trigger: AAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAG...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAAGTGTTCCTGGCTGTaGGCTCTGCAACACATACTG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHKCSWL*ALQHIL
Trigger: CAGTATGTGTTGCAGAGCTCACAGCCAGGAACACTT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATGCTGCTGCCGGTGCTaGAGCTCCTGCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQCCCRC*SSCLSR
Trigger: CCTGCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTCCTGCTGCTGCCGGTaGTGCAGCTCCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRSCCCR*CSSCLS
Trigger: GCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCAGGA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAGCCGTGCTGAGGGCTaGAGTTGGATAGCTTTAGTG +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSRAEG*SWIALV
Trigger: CACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATGGGCTTCCTGTAAGCTaGCGTGGTGGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNGLPVS*RGGRAS
Trigger: TGATGCTCTACCACCACGGCAGCTTACAGGAAGCCC...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGGGCTTCCTGTAAGCTaGCGTGGTGGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSGLPVS*RGGRAS
Trigger: TGATGCTCTACCACCACGGCAGCTTACAGGAAGCCC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTATATGCCTGCCCTAGAGGGCTTCCTGTAAGCTaGCGTGGTGGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: KLSVAASKLPSSLYACPRGLPVS*RGGRAS
Trigger: TGATGCTCTACCACCACGGCAGCTTACAGGAAGCCC...TCTAGGGCAGGCATATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTCTTTTATGTGGGGTTaGAACCCTGGCTGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSFMWG*NPGCSS
Trigger: CGAAGAGCAGCCAGGGTTGCAACCCCACATAAAAGA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTGGACGATCTGGTTCCAAGGAGGGTGATGATCCCTTaGGTTCGCAGTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GTEFLLAAQIPLDDLVPRRVMIP*VRSLSH
Trigger: ATGACTCAGACTGCGAACCCAAGGGATCATCACCCT...CCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp GTGGTGGTAGAGCATCATTCCCCGGAGCTGGAGGGTTTGCACATGATTTTGGTTAGGGTGATGATCCCTTaGGTTCGCAGTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VVVEHHSPELEGLHMILVRVMIP*VRSLSH
Trigger: ATGACTCAGACTGCGAACCCAAGGGATCATCACCCT...AACCAAAATCATGTGCAAACCCTCCAGCTCCGGGGAATGATGCTCTACCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp GGCTCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGGCAATAGACTTGGCCTaGCTCAGAATCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GSSCRHRLKFLRASCKLPAIDLA*LRIFSV
Trigger: CACTGAGAAGATTCTGAGCCAGGCCAAGTCTATTGC...CGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATTCAGGGCTAGCCTTCTaGCCTGGGAGAGGATCATTC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNSGLAF*PGRGSF
Trigger: GAATGATCCTCTCCCAGGCCAGAAGGCTAGCCCTGA...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATGTGGGGTTGCAACCCTaGCTGCTCTTCGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNVGLQP*LLFVVF
Trigger: GAAGACTACGAAGAGCAGCCAGGGTTGCAACCCCAC...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAACCACAGCACGGGCTaGTCTGGGTCAGCAATCCTT +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSNHSTG*SGSAIL
Trigger: AAGGATTGCTGACCCAGACCAGCCCGTGCTGTGGTT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAACCACAGCACGGGCTaGTCTGGGTCAGCAATCCTT +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNNHSTG*SGSAIL
Trigger: AAGGATTGCTGACCCAGACCAGCCCGTGCTGTGGTT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAGCAACAGTGCCTTTTaGAAGCTCTCAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSNSAF*KLSVAA
Trigger: AGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATCCATGGCAACATGGCTaGGCCCTTTCATATACTGGC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNPWQHG*ALSYTG
Trigger: GCCAGTATATGAAAGGGCTCAGCCATGTTGCCATGG...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGCTGCACGGCTTGCATaGCCTCCAATGCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQAARLA*PPMRPN
Trigger: GTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTGTTCCTGGCTGTaGGCTCTGCAACACATACTG +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVKCSWL*ALQHIL
Trigger: CAGTATGTGTTGCAGAGCTCACAGCCAGGAACACTT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAGCCGTGCTGAGGGCTaGAGTTGGATAGCTTTAGTG +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSSRAEG*SWIALV
Trigger: CACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGTACGCTGCACGGCTTaGATGACCTCCAATGCGGCC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRVRCTA*MTSNAA
Trigger: GGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTAC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACGTACGCTGCACGGCTTaGATGACCTCCAATGCGGCC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDVRCTA*MTSNAA
Trigger: GGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTAC...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTGGGAACCAACAGGCTaGCGGCTAATACATACGCTT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVWEPTG*RLIHTL
Trigger: AAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAGGGTGATGATCCCTTaGGTTCGCAGTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVRVMIP*VRSLSH
Trigger: ATGACTCAGACTGCGAACCCAAGGGATCATCACCCT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGCAATAGACTTGGCCTaGCTCAGAATCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHAIDLA*LRIFSV
Trigger: CACTGAGAAGATTCTGAGCCAGGCCAAGTCTATTGC...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAACACATCTTTTATGTaGGGTTGCAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHNTSFM*GCNPGC
Trigger: GCAGCCAGGGTTGCAACCCCACATAAAAGATGTGTT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAGTTCTAAGGACTGCTaGAAGTCTTCATGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSSKDC*KSSWAV
Trigger: AACAGCCCATGAAGACTTTCAGCAGTCCTTAGAACT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GGCTCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGGCACATGATTTTGGTTaGGCAACAGTGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSSCRHRLKFLRASCKLPAHDFG*ATVPFE
Trigger: TTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGC...CGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp GCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAAATACCCCCTCGGCCATAAATTaGACTAACCAGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASLIRPRGDRISARCSNTPSAIN*TNQIRL
Trigger: GAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGG...GGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp GGCTATCCCTCGGCCATAAATTGCACTAACCAGATCAGGCTCCTCCTGAAGCATAGAATTTCTGCTCGCTaGTCAAATACCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: GYPSAINCTNQIRLLLKHRISAR*SNTSGR
Trigger: TCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCT...ATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp GGCTCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGTGGCTGCTTCAAAATTaGCCAGTTCTCTATATGCCT +
Preference number: 4 (lower is better)
Translates to: GSSCRHRLKFLRASCKLPWLLQN*PVLYMP
Trigger: AGGCATATAGAGAACTGGGCAATTTTGAAGCAGCCA...CGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CATTCCCCGGAGCTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTAAAGCTCTCAGTGGCTaGTTCAAAATTGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HSPELEGLHMILVEQQCLKALSG*FKIAQF
Trigger: GAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTT...AAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAGCTCCGGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATCCAGGTGTTTCATATTaGATCAGGGATCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHPGVSY*IRDPKR
Trigger: TCGTTTGGGATCCCTGATGCAATATGAAACACCTGG...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTACCTCTGGACGATCTaGTTCCAAGGTAATTACTCG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHYLWTI*FQGNYS
Trigger: CGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCTTCGAACTTTCGAGTTaGTCCATGTACGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSFELSS*SMYAAR
Trigger: CCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAA...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTCAGCACGGGCTGGTCTaGGTCAGCAATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRQHGLV*VSNPSP
Trigger: TGGAGAAGGATTGCTGACCCAGACCAGCCCGTGCTG...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAGAGGGGACAGAATCTaGAGCATTGTTGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHRGDRI*SIVEKC
Trigger: GCATTTTTCAACAATGCTTCAGATTCTGTCCCCTCT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366662.8
CDS-3UTR GCA 90 bp AAATTGCCCAGTTCTCTATATGCCTGCCCTAGACTTTTATATGCATCAATAAAGTCCTGCTGCTGCCGGTaGTGCAGCTCCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KLPSSLYACPRLLYASIKSCCCR*CSSCLS
Trigger: GCTCAAGCAGGAGCTGCAGCACCGGCAGCAGCAGGA...CTTTATTGATGCATATAAAAGTCTAGGGCAGGCATATAGAGAACTGGGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp GAGGTCATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGAGGGGACAGAATTTCTaGTCGCTGCTCAAATACCTC +
Preference number: 4 (lower is better)
Translates to: EVIHCFINSSQRGQNFCSRGQNF*SLLKYL
Trigger: GAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCT...CGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAATGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp GGCTATCCCTCGGCCATAAATTGCACTAACCAGATCAGGCTCCTCCTGAAGCATAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GYPSAINCTNQIRLLLKHSEVIH*FINSSQ
Trigger: CTGGGACGAATTAATGAAGCAGTGAATGACCTCACT...ATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTTGGTTGAGCAACAGTaGCTTTTGAAAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHLVEQQ*LLKALS
Trigger: ACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATTGGTCCATGTACGCTaGACGGCTTGCATGACCTCC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQLVHVR*TACMTS
Trigger: GGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAACATGTCTCTCCACTaGATCAACCGTGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNNMSLH*INRVFP
Trigger: TGGGAAGACACGGTTGATGCAGTGGAGAGACATGTT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAACATGTCTCTCCACTaGATCAACCGTGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSNMSLH*INRVFP
Trigger: TGGGAAGACACGGTTGATGCAGTGGAGAGACATGTT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAGGTCATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGGCAATAGACTTGGCCTaGCTCAGAATCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EVIHCFINSSQRGQNFCSAIDLA*LRIFSV
Trigger: CACTGAGAAGATTCTGAGCCAGGCCAAGTCTATTGC...CGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAATGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp ATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTGGACGATGCTGTCATTATCAGTaGCAAACGGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IRPRGDRISARCSNTSGRCCHYQ*QTGISS
Trigger: AGAAGAGATTCCCGTTTGCCACTGATAATGACAGCA...TCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp TGCTCAAATACCTCTGGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGCTGCTCAAATACCTCTaGACGATCTGGTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CSNTSGRSGSKVITRLSSLLKYL*TIWFQG
Trigger: ACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAG...CGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCTGTCCCATGGCAACATaGCTGAGCCCTTTCATATAC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSCPMAT*LSPFIY
Trigger: GTATATGAAAGGGCTCAGCCATGTTGCCATGGGACA...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTCAGGGCTAGCCTTCTaGCCTGGGAGAGGATCATTC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDSGLAF*PGRGSF
Trigger: GAATGATCCTCTCCCAGGCCAGAAGGCTAGCCCTGA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGTGGGGTTGCAACCCTaGCTGCTCTTCGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQVGLQP*LLFVVF
Trigger: GAAGACTACGAAGAGCAGCCAGGGTTGCAACCCCAC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAACACATCTTTTATGTaGGGTTGCAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNNTSFM*GCNPGC
Trigger: GCAGCCAGGGTTGCAACCCCACATAAAAGATGTGTT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCAAAGGACCCACACATaGAGGTTACGTGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSQRTHT*RLREST
Trigger: TGTTGACTCACGTAACCTCCATGTGTGGGTCCTTTG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATCAAAGGACCCACACATaGAGGTTACGTGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNQRTHT*RLREST
Trigger: TGTTGACTCACGTAACCTCCATGTGTGGGTCCTTTG...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCAGCATTTGGGACTCTaGCAAGTACTGTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSQHLGL*QVLSAL
Trigger: CAATGCAGACAGTACTTGCCAGAGTCCCAAATGCTG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp CATTCCCCGGAGCTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTGCTTTTAAGAGTCTTTaGTTTCGGGGTTCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: HSPELEGLHMILVEQQCLAFKSL*FRGSCL
Trigger: TAGACAGGAACCCCGAAACCAAAGACTCTTAAAAGC...AAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAGCTCCGGGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR TCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAGATCAGGCTCCTCCTaGAGCATTGTTGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSRSGSS*SIVEKC
Trigger: GCATTTTTCAACAATGCTTCAGGAGGAGCCTGATCT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR TCA 90 bp ATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAGATCAGGCTCCTCCTaGAGCATTGTTGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: IHCFINSSQRGQNFCSLLRSGSS*SIVEKC
Trigger: GCATTTTTCAACAATGCTTCAGGAGGAGCCTGATCT...GAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR TCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAGTTCTAAGGACTGCTaGAAGTCTTCATGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNSSKDC*KSSWAV
Trigger: AACAGCCCATGAAGACTTTCAGCAGTCCTTAGAACT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp ACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTATAGCAACAGTGCCTTTTaGAAGCTCTCAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVPFESSQWLLQNCPVLYSNSAF*KLSVAA
Trigger: AGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCT...ATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR TCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCGCACATGATTTTGGTTaGGCAACAGTGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVAHDFG*ATVPFE
Trigger: TTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGC...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATTGGAGGGTTTGCACATaGTTTTGGTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNWRVCT*FWLSNS
Trigger: ACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCA...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCATGGCAACATGGCTaGGCCCTTTCATATACTGGC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDPWQHG*ALSYTG
Trigger: GCCAGTATATGAAAGGGCTCAGCCATGTTGCCATGG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTTTGCTAAAGGCCTCTaGACCAGGGGCTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRFAKGL*TRGCHS
Trigger: GCTATGACAGCCCCTGGTTCAGAGGCCTTTAGCAAA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATGAATCTCTTCTGTTCTaGAATAGACTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNESLLF*NRLGLA
Trigger: AGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTC...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ATTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCGAATCTCTTCTGTTCTaGAATAGACTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IHCFINSSQRGQNFCSLLESLLF*NRLGLA
Trigger: AGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTC...GAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATCATCATACAGACCACTaGCAATCAAGACATAAGCAA +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHHHTDH*QSRHKQ
Trigger: TTGCTTATGTCTTGATTGGCAGTGGTCTGTATGATG...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAGAATTTCTGCTCGCTaGTCAAATACCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNRISAR*SNTSGR
Trigger: TCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTGGCTGCTTCAAAATTaGCCAGTTCTCTATATGCCT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVWLLQN*PVLYMP
Trigger: AGGCATATAGAGAACTGGGCAATTTTGAAGCAGCCA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTTGGTTGAGCAACAGTaGCTTTTGAAAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVLVEQQ*LLKALS
Trigger: ACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTTATATGGCTCTAGCTaGAGACACCGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVLYGSS*RHRLKF
Trigger: GAACTTTAAGCGGTGTCTGCAGCTAGAGCCATATAA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTCCACTTGCCATCAGTaGTCCCACGATGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRSTCHQ*SHDDRV
Trigger: TACTCGGTCATCGTGGGAGCACTGATGGCAAGTGGA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCTACTTCTTTTCCACTTaGCATCAGTGCTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSYFFST*HQCSHD
Trigger: ATCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTA...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTCGCAGTCTGAGTCATaGAAGTTCAAAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSQSES*KFKKDD
Trigger: GTCATCCTTTTTGAACTTCCATGACTCAGACTGCGA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TATCCCTCGGCCATAAATTGCACTAACCAGATCAGGCTCCTCCTGAAGCATTGTTACCTCTGGACGATCTaGTTCCAAGGTAATTACTCG +
Preference number: 4 (lower is better)
Translates to: YPSAINCTNQIRLLLKHCYLWTI*FQGNYS
Trigger: CGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTA...ACAATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTCATATTCCTTCCCTTaGTCTTTAAGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSYSFP*SLRLGT
Trigger: AGTTCCCAGCCTTAAAGACCAAGGGAAGGAATATGA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAGTAAGCAATTACACTaGATCCTCGAGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSSKQLH*ILERVA
Trigger: TGCCACTCTCTCGAGGATCCAGTGTAATTGCTTACT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTCAAATACCTCTGGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGAACTTGGGTTCGCAGTCTaGGTCATGGAAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LKYLWTIWFQGNYSAQFELGFAV*VMEVQK
Trigger: TTTTTGAACTTCCATGACTCAGACTGCGAACCCAAG...TTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR TCA 90 bp CAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTCTTGGGTTCGCAGTCTaGGTCATGGAAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QQCLLKALSGCFKIAQFSLGFAV*VMEVQK
Trigger: TTTTTGAACTTCCATGACTCAGACTGCGAACCCAAG...AGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACAGCAACAGTGCCTTTTaGAAGCTCTCAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDSNSAF*KLSVAA
Trigger: AGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAAGGAAGGAGTTATATaGCTTTATAAGTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHKEGVI*LYKWEP
Trigger: TGGTTCCCACTTATAAAGTCATATAACTCCTTCCTT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCCTCTACCTCATTCTCTaGTATGAAGTACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LEGLHMILVEQQCLLKALLYLIL*YEVQGS
Trigger: GGAACCCTGTACTTCATATCAGAGAATGAGGTAGAG...GAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACCCTCGGCCATAAATTaGACTAACCAGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQPSAIN*TNQIRL
Trigger: GAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNSEVIH*FINSSQ
Trigger: CTGGGACGAATTAATGAAGCAGTGAATGACCTCACT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTCTTTTATGTGGGGTTaGAACCCTGGCTGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRSFMWG*NPGCSS
Trigger: CGAAGAGCAGCCAGGGTTGCAACCCCACATAAAAGA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATGGGAACCAACAGGCTaGCGGCTAATACATACGCTT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQWEPTG*RLIHTL
Trigger: AAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATCTGGCAAGTACTGTCTaGATTGTTCAAAATAAGTGT +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHLASTV*IVQNKC
Trigger: ACACTTATTTTGAACAATGCAGACAGTACTTGCCAG...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATTGCTGTCATTATCAGTaGCAAACGGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNCCHYQ*QTGISS
Trigger: AGAAGAGATTCCCGTTTGCCACTGATAATGACAGCA...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATAGCATAGCTATAGGCTaGTTTTTGTTCAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSIAIG*FLFSSK
Trigger: CTTAGAACTGAACAAAAACCAGCCTATAGCTATGCT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATTCGAACTTTCGAGTTaGTCCATGTACGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQFELSS*SMYAAR
Trigger: CCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CAA 72 bp GGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTaGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLHMILVEQQCL*KALSGCFKIAQ
Trigger: CTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACATAGTCCTCTGATATaGAGTACAGGGTTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQHSPLI*STGFPD
Trigger: ATCGGGGAACCCTGTACTTCATATCAGAGGACTATG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCATAGTCCTCTGATATaGAGTACAGGGTTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDHSPLI*STGFPD
Trigger: ATCGGGGAACCCTGTACTTCATATCAGAGGACTATG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGTATCAAGGTGTGCATaGAGATATCGAGAATACTCT +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSVSRCA*RYREYS
Trigger: AGAGTATTCTCGATATCTTCATGCACACCTTGATAC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTAGAGGGGACAGAATCTaGAGCATTGTTGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: QQCLLKALSGCFKIAQFSRGDRI*SIVEKC
Trigger: GCATTTTTCAACAATGCTTCAGATTCTGTCCCCTCT...AGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCATCATACAGACCACTaGCAATCAAGACATAAGCAA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSHHTDH*QSRHKQ
Trigger: TTGCTTATGTCTTGATTGGCAGTGGTCTGTATGATG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCACTGCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCACATCATACAGACCACTaGCAATCAAGACATAAGCAA +
Preference number: 4 (lower is better)
Translates to: FTASLIRPRGDRISARCSHHTDH*QSRHKQ
Trigger: TTGCTTATGTCTTGATTGGCAGTGGTCTGTATGATG...TGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTAGGGGACAGAATTTCTaGTCGCTGCTCAAATACCTC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRRGQNF*SLLKYL
Trigger: GAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCT...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR GCA 90 bp TTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVEQQCLLKALSGCFKIASEVIH*FINSSQ
Trigger: CTGGGACGAATTAATGAAGCAGTGAATGACCTCACT...GGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CCCAGTTCTCTATATGCCTGCCCTAGACTTTTATATGCATCAATAAAGTCAACTAGCCGTGCTGAGGGCTaGAGTTGGATAGCTTTAGTG +
Preference number: 4 (lower is better)
Translates to: PSSLYACPRLLYASIKSTSRAEG*SWIALV
Trigger: CACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCT...AGTTGACTTTATTGATGCATATAAAAGTCTAGGGCAGGCATATAGAGAACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAGTTCTCTATATGCCTaGCCTAGACTTTTATATGCA +
Preference number: 4 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVSSLYA*PRLLYA
Trigger: TGCATATAAAAGTCTAGGGCAGGCATATAGAGAACT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCTTGGTTGAGCAACAGTaGCTTTTGAAAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LVEQQCLLKALSGCFKIALVEQQ*LLKALS
Trigger: ACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA...GGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp ACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTATTCAATAGCTTCAGCATaGTTGGACGCCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TVPFESSQWLLQNCPVLYSIASA*LDATVL
Trigger: AAGAACTGTGGCGTCCAAGCATGCTGAAGCTATTGA...ATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp GGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTGTCATTATCAGTaGCAAACGGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLHMILVEQQCLLKALSGCCHYQ*QTGISS
Trigger: AGAAGAGATTCCCGTTTGCCACTGATAATGACAGCA...GCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTCTGCTCAAATACCTCTaGACGATCTGGTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRLLKYL*TIWFQG
Trigger: ACCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAG...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR CCA 90 bp CTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCTTTGAAAGCTCTCAGTaGCTGCTTCAAAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: LEGLHMILVEQQCLLKALFESSQ*LLQNCP
Trigger: TGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAA...GAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAGCCCTTTCATATACTaGCACACTTCATTATATGGC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSSPFIY*HTSLYG
Trigger: GCCATATAATGAAGTGTGCCAGTATATGAAAGGGCT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCAGCATTTGGGACTCTaGCAAGTACTGTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDQHLGL*QVLSAL
Trigger: CAATGCAGACAGTACTTGCCAGAGTCCCAAATGCTG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
3UTR CAA 72 bp CAGGCTCCTCCTGAAGCATTGTTGAAAAATGCCGTATaGCTTCATCATACAGACCACTGCCAATCAAGACAT +
Preference number: 4 (lower is better)
Translates to: QAPPEALLKNAV*LHHTDHCQSRH
Trigger: ATGTCTTGATTGGCAGTGGTCTGTATGATGAAGCAATACGGCATTTTTCAACAATGCTTCAGGAGGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR TCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTCTTGGGTTCGCAGTCTaGGTCATGGAAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRLGFAV*VMEVQK
Trigger: TTTTTGAACTTCCATGACTCAGACTGCGAACCCAAG...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACTTGGGTTCGCAGTCTaGGTCATGGAAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQLGFAV*VMEVQK
Trigger: TTTTTGAACTTCCATGACTCAGACTGCGAACCCAAG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTGTTGCATAGTCCTCTaGTATGAAGTACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRCCIVL*YEVQGS
Trigger: GGAACCCTGTACTTCATATCAGAGGACTATGCAACA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCTTCAGAAGTCCTCTGTaGAAGAAAGTTAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSFRSPL*KKVKPL
Trigger: CAAAGGTTTAACTTTCTTTCACAGAGGACTTCTGAA...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTGGAGGGTTTGCACATaGTTTTGGTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRWRVCT*FWLSNS
Trigger: ACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACACATGGAGGTTACGTaGGTCAACAAAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQHMEVT*VNKRCS
Trigger: AGAGCATCTTTTGTTGACTCACGTAACCTCCATGTG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAATCTGAAGCATTGTTaGAAAATGCCGTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSNLKHC*KMPYCF
Trigger: GAAGCAATACGGCATTTTTCAACAATGCTTCAGATT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366662.8
CDS-3UTR GCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGAATCTCTTCTGTTCTaGAATAGACTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRESLLF*NRLGLA
Trigger: AGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp TTCATATACTGGCACACTTCATTATATGGCTCTAGCTGCAGACACCGCTTAAAGGAATCTCTTCTGTTCTaGAATAGACTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FIYWHTSLYGSSCRHRLKESLLF*NRLGLA
Trigger: AGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTC...CTTTAAGCGGTGTCTGCAGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCCATCATACAGACCACTaGCAATCAAGACATAAGCAA +
Preference number: 4 (lower is better)
Translates to: LEGLHMILVEQQCLLKALHHTDH*QSRHKQ
Trigger: TTGCTTATGTCTTGATTGGCAGTGGTCTGTATGATG...GAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCAGTTCTCTATATGCCTaGCCTAGACTTTTATATGCA +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSSSLYA*PRLLYA
Trigger: TGCATATAAAAGTCTAGGGCAGGCATATAGAGAACT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACAAAGCTCTCAGTGGCTaGTTCAAAATTGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDKALSG*FKIAQF
Trigger: GAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAAAGCTCTCAGTGGCTaGTTCAAAATTGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQKALSG*FKIAQF
Trigger: GAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTT...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCAGGTGTTTCATATTaGATCAGGGATCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDPGVSY*IRDPKR
Trigger: TCGTTTGGGATCCCTGATGCAATATGAAACACCTGG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTACTTCTTTTCCACTTaGCATCAGTGCTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDYFFST*HQCSHD
Trigger: ATCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATTTTGGGAATTTTTCCTaGTACTTCTTTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNFGNFS*YFFSTC
Trigger: GCAAGTGGAAAAGAAGTAGCAGGAAAAATTCCCAAA...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCTGGCAAGTACTGTCTaGATTGTTCAAAATAAGTGT +
Preference number: 4 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSLASTV*IVQNKC
Trigger: ACACTTATTTTGAACAATGCAGACAGTACTTGCCAG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTATTTCCTGTCTAATCACTaGACAGCTCTCTACCTCATT +
Preference number: 4 (lower is better)
Translates to: TVPFESSQWLLQNCPVLYFLSNH*TALYLI
Trigger: AATGAGGTAGAGAGCTGTGCAGTGATTAGACAGGAA...ATAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp CTCAAATACCTCTGGACGATCTGGTTCCAAGGTAATTACTCGGCTCAGTTCGAACTTCTCATAACTGTCTaGTCTTGCTTAATAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LKYLWTIWFQGNYSAQFELLITV*SCLISL
Trigger: CAGGCTTATTAAGCAAGACCAGACAGTTATGAGAAG...TTCGAACTGAGCCGAGTAATTACCTTGGAACCAGATCGTCCAGAGGTATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACTCCTGAAGCATTGTTaGAAAATGCCGTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQLLKHC*KMPYCF
Trigger: GAAGCAATACGGCATTTTTCAACAATGCTTCAGGAG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACGCACATGATTTTGGTTaGGCAACAGTGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDAHDFG*ATVPFE
Trigger: TTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGC...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp TTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCAATCTGAAGCATTGTTaGAAAATGCCGTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: LVEQQCLLKALSGCFKIANLKHC*KMPYCF
Trigger: GAAGCAATACGGCATTTTTCAACAATGCTTCAGATT...GGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQSEVIH*FINSSQ
Trigger: CTGGGACGAATTAATGAAGCAGTGAATGACCTCACT...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCTCTAGTTCTCTATATGCCTaGCCTAGACTTTTATATGCA +
Preference number: 4 (lower is better)
Translates to: QQCLLKALSGCFKIAQFSSSLYA*PRLLYA
Trigger: TGCATATAAAAGTCTAGGGCAGGCATATAGAGAACT...AGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATGGCTGCTTCAAAATTaGCCAGTTCTCTATATGCCT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQWLLQN*PVLYMP
Trigger: AGGCATATAGAGAACTGGGCAATTTTGAAGCAGCCA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATTATATGGCTCTAGCTaGAGACACCGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQLYGSS*RHRLKF
Trigger: GAACTTTAAGCGGTGTCTGCAGCTAGAGCCATATAA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACGGGGGTATCAAGGTGTaGATGAAGATATCGAGAATA +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDGGIKV*MKISRI
Trigger: TATTCTCGATATCTTCATGCACACCTTGATACCCCC...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGGGGGTATCAAGGTGTaGATGAAGATATCGAGAATA +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQGGIKV*MKISRI
Trigger: TATTCTCGATATCTTCATGCACACCTTGATACCCCC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTGCTGTCATTATCAGTaGCAAACGGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRCCHYQ*QTGISS
Trigger: AGAAGAGATTCCCGTTTGCCACTGATAATGACAGCA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTTTGAAAGCTCTCAGTaGCTGCTTCAAAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRFESSQ*LLQNCP
Trigger: TGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTTTGAAAGCTCTCAGTaGCTGCTTCAAAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDFESSQ*LLQNCP
Trigger: TGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACGTGTATTCTCTTGTTTaGCAGGAAACCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDVYSLV*QETRCF
Trigger: GAAACACCTGGTTTCCTGCCAAACAAGAGAATACAC...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGTGTATTCTCTTGTTTaGCAGGAAACCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRVYSLV*QETRCF
Trigger: GAAACACCTGGTTTCCTGCCAAACAAGAGAATACAC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATCATATTCCTTCCCTTaGTCTTTAAGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQSYSFP*SLRLGT
Trigger: AGTTCCCAGCCTTAAAGACCAAGGGAAGGAATATGA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGTATCAAGGTGTGCATaGAGATATCGAGAATACTCT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQVSRCA*RYREYS
Trigger: AGAGTATTCTCGATATCTTCATGCACACCTTGATAC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTAGCCCTTTCATATACTaGCACACTTCATTATATGGC +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRSPFIY*HTSLYG
Trigger: GCCATATAATGAAGTGTGCCAGTATATGAAAGGGCT...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTTCAGAAGTCCTCTGTaGAAGAAAGTTAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDFRSPL*KKVKPL
Trigger: CAAAGGTTTAACTTTCTTTCACAGAGGACTTCTGAA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR TCA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTAAGGAAGGAGTTATATaGCTTTATAAGTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRKEGVI*LYKWEP
Trigger: TGGTTCCCACTTATAAAGTCATATAACTCCTTCCTT...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACCTTCTCCATTTAACTaGAATGTCAAACATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQPSPFN*NVKHVS
Trigger: AGAGACATGTTTGACATTGCAGTTAAATGGAGAAGG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCTTCTCCATTTAACTaGAATGTCAAACATGTCTCT +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDPSPFN*NVKHVS
Trigger: AGAGACATGTTTGACATTGCAGTTAAATGGAGAAGG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATTTGGGAATTTTTCCTaGTACTTCTTTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQFGNFS*YFFSTC
Trigger: GCAAGTGGAAAAGAAGTAGCAGGAAAAATTCCCAAA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CCA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGCATAGCTATAGGCTaGTTTTTGTTCAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQSIAIG*FLFSSK
Trigger: CTTAGAACTGAACAAAAACCAGCCTATAGCTATGCT...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACAGCATTGTTGAAAAATaGCGTATTGCTTCATCATAC +
Preference number: 4 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDSIVEK*RIASSY
Trigger: GTATGATGAAGCAATACGGCATTTTTCAACAATGCT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR GCA 90 bp ATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGTAGTAGCATTGTTGAAAAATaGCGTATTGCTTCATCATAC +
Preference number: 4 (lower is better)
Translates to: ITRLSSNRASSAFLMSCSSIVEK*RIASSY
Trigger: GTATGATGAAGCAATACGGCATTTTTCAACAATGCT...ACTACATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR GCA 90 bp TTCATATACTGGCACACTTCATTATATGGCTCTAGCTGCAGACACCGCTTAAAGAGCATTGTTGAAAAATaGCGTATTGCTTCATCATAC +
Preference number: 4 (lower is better)
Translates to: FIYWHTSLYGSSCRHRLKSIVEK*RIASSY
Trigger: GTATGATGAAGCAATACGGCATTTTTCAACAATGCT...CTTTAAGCGGTGTCTGCAGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR GCA 90 bp TCTCTATATGCCTGCCCTAGACTTTTATATGCATCAATAAAGTCAACTTTCTGCTTATATGGCTCTAGCTaGAGACACCGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLYACPRLLYASIKSTFCLYGSS*RHRLKF
Trigger: GAACTTTAAGCGGTGTCTGCAGCTAGAGCCATATAA...GCAGAAAGTTGACTTTATTGATGCATATAAAAGTCTAGGGCAGGCATATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CCA 90 bp AAATTGCCCAGTTCTCTATATGCCTGCCCTAGACTTTTATATGCATCAATAAAGAGCCCTTTCATATACTaGCACACTTCATTATATGGC +
Preference number: 4 (lower is better)
Translates to: KLPSSLYACPRLLYASIKSPFIY*HTSLYG
Trigger: GCCATATAATGAAGTGTGCCAGTATATGAAAGGGCT...CTTTATTGATGCATATAAAAGTCTAGGGCAGGCATATAGAGAACTGGGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS GCA 90 bp CACAGCGCCGCCCCAGAAGCAGCAGCAGCAGCAGCAGCCGGCAGGTaGCATCTTCCCTCAAGGCGCATGCGCGACAGCCCTTGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: HSAAPEAAAAAAAGR*HLPSRRMRDSPCPA
Trigger: AGCCGGGCAAGGGCTGTCGCGCATGCGCCTTGAGGGAAGATGGCACCTGCCGGCTGCTGCTGCTGCTGCTGCTTCTGGGGCGGCGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp AGAGGGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTGGACGATCTGGTTCCTGCTGCAGCTCCTGCTaGAGCAGGGAGAGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: RGDRISARCSNTSGRSGSCCSSC*SRESGE
Trigger: CTCGCCGCTCTCCCTGCTCAAGCAGGAGCTGCAGCA...GGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp TCTAGCTGCAGACACCGCTTAAAGTTCTTAAGGGCTTCCTGTAAGCTGCCGTGGTGCTGCAGCTCCTGCTaGAGCAGGGAGAGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: SSCRHRLKFLRASCKLPWCCSSC*SRESGE
Trigger: CTCGCCGCTCTCCCTGCTCAAGCAGGAGCTGCAGCA...CCACGGCAGCTTACAGGAAGCCCTTAAGAACTTTAAGCGGTGTCTGCAGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTGTACGCTGCACGGCTaGCATGACCTCCAATGCGGC +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHCTLHG*HDLQCG
Trigger: GCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 90 bp CGTGTCTTCCCATTCATTCGAACTTTCGAGTTGGTCCATGTACGCTaGACGGCTTGCATGACCTCCAATGCGGCCAAACCCATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RVFPFIRTFELVHVR*TACMTSNAAKPIAL
Trigger: CAGAGCTATGGGTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAATGAATGGGAAGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 90 bp AAGGAGTCACAGGGTGATGATCCCTTGGGTTCGCAGTCTGAGTCATaGAAGTTCAAAAAGGATGACTCGCCGCACTCGGCAGAGTACTGG +
Preference number: 5 (lower is better)
Translates to: KESQGDDPLGSQSES*KFKKDDSPHSAEYW
Trigger: CCAGTACTCTGCCGAGTGCGGCGAGTCATCCTTTTTGAACTTCCATGACTCAGACTGCGAACCCAAGGGATCATCACCCTGTGACTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000466507.2
ENST00000481976.6
ENST00000522821.5
CDS-3UTR CAA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATTGTACGCTGCACGGCTaGCATGACCTCCAATGCGGC +
Preference number: 5 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNCTLHG*HDLQCG
Trigger: GCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACA...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATGCTGCAGCTCCTGCTaGAGCAGGGAGAGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQCCSSC*SRESGE
Trigger: CTCGCCGCTCTCCCTGCTCAAGCAGGAGCTGCAGCA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTGCTGCAGCTCCTGCTaGAGCAGGGAGAGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRCCSSC*SRESGE
Trigger: CTCGCCGCTCTCCCTGCTCAAGCAGGAGCTGCAGCA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 90 bp TACAGGGTTCCCCGATGTCTGTACAGCCGTGCTGAGGGCTGCAGTTaGATAGCTTTAGTGAGGTCATTCACTGCTTCATTAATTCGTCCC +
Preference number: 5 (lower is better)
Translates to: YRVPRCLYSRAEGCS*IALVRSFTASLIRP
Trigger: GGGACGAATTAATGAAGCAGTGAATGACCTCACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGACATCGGGGAACCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000481976.6
ENST00000522399.1
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTGTTCTGCAATAGACTaGGCCTGGCTCAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHCSAID*AWLRIF
Trigger: GAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GGGACAGAATTTCTGCTCGCTGCTCAAATACCTCTGGACGATCTGGTTCCAAGGTGTTCTGCAATAGACTaGGCCTGGCTCAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: GTEFLLAAQIPLDDLVPRCSAID*AWLRIF
Trigger: GAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACA...CCTTGGAACCAGATCGTCCAGAGGTATTTGAGCAGCGAGCAGAAATTCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp GGCTATCCCTCGGCCATAAATTGCACTAACCAGATCAGGCTCCTCCTGAAGCATGCTCCTCCTGAAGCATaGTTGAAAAATGCCGTATTG +
Preference number: 5 (lower is better)
Translates to: GYPSAINCTNQIRLLLKHAPPEA*LKNAVL
Trigger: CAATACGGCATTTTTCAACAATGCTTCAGGAGGAGC...ATGCTTCAGGAGGAGCCTGATCTGGTTAGTGCAATTTATGGCCGAGGGATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGCTATAGGCTGGTTTTaGTTCAGTTCTAAGGACTGC +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHAIGWF*FSSKDC
Trigger: GCAGTCCTTAGAACTGAACAAAAACCAGCCTATAGC...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCACCAGGTGTTTCATATaGCATCAGGGATCCCAAACG +
Preference number: 5 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVTRCFI*HQGSQT
Trigger: CGTTTGGGATCCCTGATGCAATATGAAACACCTGGT...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATATCATATTCCTTCCCTaGGTCTTTAAGGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHIIFLP*VFKAGN
Trigger: GTTCCCAGCCTTAAAGACCAAGGGAAGGAATATGAT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCTACTTCTTTTCCACTaGCCATCAGTGCTCCCACGA +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSLLLFH*PSVLPR
Trigger: TCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTAG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS TCA 90 bp TTAATGTGGTTGTTAAAACCTCTGCTAAGACTTCGTGCTGGCATTTaGTCTAACCACAGCACGGGCTGGTCTGGGTCAGCAATCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LMWLLKPLLRLRAGI*SNHSTGWSGSAILL
Trigger: GAGAAGGATTGCTGACCCAGACCAGCCCGTGCTGTGGTTAGATCAAATGCCAGCACGAAGTCTTAGCAGAGGTTTTAACAACCACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000486879.2
CDS GCA 90 bp ATGAAGTACAGGGTTCCCCGATGTCTGTACAGCCGTGCTGAGGGCTaGAGTTGGATAGCTTTAGTGAGGTCATTCACTGCTTCATTAATT +
Preference number: 5 (lower is better)
Translates to: MKYRVPRCLYSRAEG*SWIALVRSFTASLI
Trigger: AATTAATGAAGCAGTGAATGACCTCACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGACATCGGGGAACCCTGTACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000481976.6
ENST00000522399.1
CDS GCA 90 bp CCCTTTGGGAATTTTTCCTGCTACTTCTTTTCCACTTGCCATCAGTaGTCCCACGATGACCGAGTAAGCAATTACACTGGATCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: PFGNFSCYFFSTCHQ*SHDDRVSNYTGSSR
Trigger: TCTCGAGGATCCAGTGTAATTGCTTACTCGGTCATCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTAGCAGGAAAAATTCCCAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACAGGGTGATGATCCCTaGGGTTCGCAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQQGDDP*GSQSES
Trigger: TGACTCAGACTGCGAACCCAAGGGATCATCACCCTG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCACCAGGTGTTTCATATaGCATCAGGGATCCCAAACG +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSTRCFI*HQGSQT
Trigger: CGTTTGGGATCCCTGATGCAATATGAAACACCTGGT...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAGTTCATCCAGCTTTaGGCGACTTTGCTAAAGGCC +
Preference number: 5 (lower is better)
Translates to: VSSATHTDGPGTFFHGSNKFIQL*ATLLKA
Trigger: GGCCTTTAGCAAAGTCGCCAAAAGCTGGATGAACTT...ATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGGTCCGGCCCTTTACTaGTATAAATACAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSGPALY*YKYSSR
Trigger: TCTGCTGCTGTATTTATACAAGTAAAGGGCCGGACC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTCAATAATTCAGCATTaGGGACTCTGGCAAGTACTG +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHSIIQH*GLWQVL
Trigger: CAGTACTTGCCAGAGTCCCAAATGCTGAATTATTGA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 90 bp GCTCTGTGTATTCTCTTGTTTGGCAGGAAACCAGGTGTTTCATATTaGATCAGGGATCCCAAACGATCAGCCACACAAATCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ALCILLFGRKPGVSY*IRDPKRSATQISSC
Trigger: ACAGGAGCTGATTTGTGTGGCTGATCGTTTGGGATCCCTGATGCAATATGAAACACCTGGTTTCCTGCCAAACAAGAGAATACACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATTGCTTCAAAGCTTCTTaGAAGGATTCAATAGCTTCC +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHCFKAS*KDSIAS
Trigger: GGAAGCTATTGAATCCTTCAAAGAAGCTTTGAAGCA...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGGTTTGCACATGATTTaGGTTGAGCAACAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSGLHMI*VEQQCL
Trigger: AAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGGAGGGTTTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCATAGCTTCAGCATGCTaGGACGCCACAGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LEGLHMILVEQQCLLKALIASAC*DATVLQ
Trigger: TTGAAGAACTGTGGCGTCCAAGCATGCTGAAGCTAT...GAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAAACCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp CCTTTCATATACTGGCACACTTCATTATATGGCTCTAGCTGCAGACACCGCTTATGTTCTGCAATAGACTaGGCCTGGCTCAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: PFIYWHTSLYGSSCRHRLCSAID*AWLRIF
Trigger: GAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACA...TAAGCGGTGTCTGCAGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp TATAAGTGGGAACCAACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCTTGAAAAATGCCGTATaGCTTCATCATACAGACCAC +
Preference number: 5 (lower is better)
Translates to: YKWEPTGCRLIHTLSLQVLKNAV*LHHTDH
Trigger: GTGGTCTGTATGATGAAGCAATACGGCATTTTTCAA...GACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCGGTTTGCACATGATTTaGGTTGAGCAACAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LVEQQCLLKALSGCFKIAGLHMI*VEQQCL
Trigger: AAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC...GGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACATTCGAACTTTCGAGTaGGTCCATGTACGCTGCACG +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDIRTFE*VHVRCT
Trigger: CGTGCAGCGTACATGGACCAACTCGAAAGTTCGAAT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCAGCTTTTGGCGACTTaGCTAAAGGCCTCTGAACCA +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDQLLAT*LKASEP
Trigger: TGGTTCAGAGGCCTTTAGCAAAGTCGCCAAAAGCTG...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACAGCTTTTGGCGACTTaGCTAAAGGCCTCTGAACCA +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQQLLAT*LKASEP
Trigger: TGGTTCAGAGGCCTTTAGCAAAGTCGCCAAAAGCTG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCTCAATAATTCAGCATTaGGGACTCTGGCAAGTACTG +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSSIIQH*GLWQVL
Trigger: CAGTACTTGCCAGAGTCCCAAATGCTGAATTATTGA...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTCCTGGCTGTGAGCTCTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATACAGAATCTGAAGCATaGTTGAAAAATGCCGTATTG +
Preference number: 5 (lower is better)
Translates to: FLAVSSATHTDGPGTFFHTESEA*LKNAVL
Trigger: CAATACGGCATTTTTCAACAATGCTTCAGATTCTGT...ATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366662.8
CDS GCA 90 bp GCAATCCTTCTCCATTTAACTGCAATGTCAAACATGTCTCTCCACTaGATCAACCGTGTCTTCCCATTCATTCGAACTTTCGAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: AILLHLTAMSNMSLH*INRVFPFIRTFELV
Trigger: GACCAACTCGAAAGTTCGAATGAATGGGAAGACACGGTTGATGCAGTGGAGAGACATGTTTGACATTGCAGTTAAATGGAGAAGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTTGTTCTGCAATAGACTaGGCCTGGCTCAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRCSAID*AWLRIF
Trigger: GAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACA...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGCTCTGTGTATTCTCTaGTTTGGCAGGAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQALCIL*FGRKPG
Trigger: ACCTGGTTTCCTGCCAAACAAGAGAATACACAGAGC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGCTCTGTGTATTCTCTaGTTTGGCAGGAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRALCIL*FGRKPG
Trigger: ACCTGGTTTCCTGCCAAACAAGAGAATACACAGAGC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp GCTTCATTAATTCGTCCCAGAGGGGACAGAATTTCTGCTCGCTGCTCAAATACCCATAACTGTCTGGTCTaGCTTAATAAGCCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: ASLIRPRGDRISARCSNTHNCLV*LNKPVE
Trigger: TTCTACAGGCTTATTAAGCAAGACCAGACAGTTATG...GGTATTTGAGCAGCGAGCAGAAATTCTGTCCCCTCTGGGACGAATTAATGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp TTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTGAAAAATGCCGTATaGCTTCATCATACAGACCAC +
Preference number: 5 (lower is better)
Translates to: LHMILVEQQCLLKALSGCLKNAV*LHHTDH
Trigger: GTGGTCTGTATGATGAAGCAATACGGCATTTTTCAA...GCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp GGTAATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGCCTCCTGAAGCATTGTaGAAAAATGCCGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: GNYSAQFEQSKLSILNVMPPEAL*KNAVLL
Trigger: AAGCAATACGGCATTTTTCAACAATGCTTCAGGAGG...CATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACGCTCCTCCTGAAGCATaGTTGAAAAATGCCGTATTG +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDAPPEA*LKNAVL
Trigger: CAATACGGCATTTTTCAACAATGCTTCAGGAGGAGC...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTGCTATAGGCTGGTTTTaGTTCAGTTCTAAGGACTGC +
Preference number: 5 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRAIGWF*FSSKDC
Trigger: GCAGTCCTTAGAACTGAACAAAAACCAGCCTATAGC...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAGGTTTGCACATGATTTaGGTTGAGCAACAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQGLHMI*VEQQCL
Trigger: AAGGCACTGTTGCTCAACCAAAATCATGTGCAAACC...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACATCATATTCCTTCCCTaGGTCTTTAAGGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDIIFLP*VFKAGN
Trigger: GTTCCCAGCCTTAAAGACCAAGGGAAGGAATATGAT...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCCAAGTACTGTCTGCATaGTTCAAAATAAGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSQVLSA*FKISVP
Trigger: AGGAACACTTATTTTGAACAATGCAGACAGTACTTG...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp AACAGGCTGCCGGCTAATACATACGCTTTCCCTCCAAGTCAAGTAGCTTTTTCCGAATCTGAAGCATTGTaGAAAAATGCCGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: NRLPANTYAFPPSQVAFSESEAL*KNAVLL
Trigger: AAGCAATACGGCATTTTTCAACAATGCTTCAGATTC...GGAAAAAGCTACTTGACTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366662.8
CDS-3UTR CAA 90 bp GAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCTTCAAAATTGCCCAGTTCACAGAATCTGAAGCATaGTTGAAAAATGCCGTATTG +
Preference number: 5 (lower is better)
Translates to: EQQCLLKALSGCFKIAQFTESEA*LKNAVL
Trigger: CAATACGGCATTTTTCAACAATGCTTCAGATTCTGT...GAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS TCA 90 bp TTTGTGCTTTTATCCCTTCATAAAACTGTCCCATGGCAACATGGCTaGGCCCTTTCATATACTGGCACACTTCATTATATGGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: FVLLSLHKTVPWQHG*ALSYTGTLHYMALA
Trigger: AGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAAAGGGCTCAGCCATGTTGCCATGGGACAGTTTTATGAAGGGATAAAAGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 90 bp TACTCTCGGAGATACTTTACTTTAAGATACTCAGGGCTAGCCTTCTaGCCTGGGAGAGGATCATTCAGCATAACTTTTGTTTGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: YSRRYFTLRYSGLAF*PGRGSFSITFVCAF
Trigger: AAAAGCACAAACAAAAGTTATGCTGAATGATCCTCTCCCAGGCCAGAAGGCTAGCCCTGAGTATCTTAAAGTAAAGTATCTCCGAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAACCTCCTGAAGCATTGTaGAAAAATGCCGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQPPEAL*KNAVLL
Trigger: AAGCAATACGGCATTTTTCAACAATGCTTCAGGAGG...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS-3UTR CAA 90 bp TTGCACATGATTTTGGTTGAGCAACAGTGCCTTTTGAAAGCTCTCAGTGGCTGCGAATCTGAAGCATTGTaGAAAAATGCCGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: LHMILVEQQCLLKALSGCESEAL*KNAVLL
Trigger: AAGCAATACGGCATTTTTCAACAATGCTTCAGATTC...GCAGCCACTGAGAGCTTTCAAAAGGCACTGTTGCTCAACCAAAATCATGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTTGAAAAATGCCGTATaGCTTCATCATACAGACCAC +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDLKNAV*LHHTDH
Trigger: GTGGTCTGTATGATGAAGCAATACGGCATTTTTCAA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp TTCCAAGGTAATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATTTGAAAAATGCCGTATaGCTTCATCATACAGACCAC +
Preference number: 5 (lower is better)
Translates to: FQGNYSAQFEQSKLSILNLKNAV*LHHTDH
Trigger: GTGGTCTGTATGATGAAGCAATACGGCATTTTTCAA...ATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAATTACCTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS-3UTR CAA 90 bp ACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAAAGGACTGCTTCAAAGCTTCTTaGAAGGATTCAATAGCTTCC +
Preference number: 5 (lower is better)
Translates to: THTDGPGTFFHGSNKTKDCFKAS*KDSIAS
Trigger: GGAAGCTATTGAATCCTTCAAAGAAGCTTTGAAGCA...GTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CTGCAACACATACTGATGGCCCAGGAACCTTCTTCCATGGTTCTAATAAAACAATCATCGATCTTAACGTaGGAAACGTTTCTGATACTG +
Preference number: 5 (lower is better)
Translates to: LQHILMAQEPSSMVLIKQSSILT*ETFLIL
Trigger: CAGTATCAGAAACGTTTCCAACGTTAAGATCGATGA...TTGTTTTATTAGAACCATGGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp CCTTTCATATACTGGCACACTTCATTATATGGCTCTAGCTGCAGACACCGCTTATGCTTCAAAGCTTCTTaGAAGGATTCAATAGCTTCA +
Preference number: 5 (lower is better)
Translates to: PFIYWHTSLYGSSCRHRLCFKAS*KDSIAS
Trigger: TGAAGCTATTGAATCCTTCAAAGAAGCTTTGAAGCA...TAAGCGGTGTCTGCAGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481976.6
CDS TCA 90 bp CTTGTAACTAAGAGAACACTCTCAGAAAACTCTCAAAGTGAAGACTaGTGGTGCTTGGGACGCATGGTTTGTGAAATATCCTTACAACAT +
Preference number: 5 (lower is better)
Translates to: LVTKRTLSENSQSED*WCLGRMVCEISLQH
Trigger: ATGTTGTAAGGATATTTCACAAACCATGCGTCCCAAGCACCATCAGTCTTCACTTTGAGAGTTTTCTGAGAGTGTTCTCTTAGTTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519379.1
CDS-3UTR CAA 90 bp GAACCTTCTTCCATGGTTCTAATAAAACAAAGGACCCACACATGGAGGTTACGTCAAGTACTGTCTGCATaGTTCAAAATAAGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: EPSSMVLIKQRTHTWRLRQVLSA*FKISVP
Trigger: AGGAACACTTATTTTGAACAATGCAGACAGTACTTG...ACGTAACCTCCATGTGTGGGTCCTTTGTTTTATTAGAACCATGGAAGAAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS-3UTR CAA 90 bp ATTACTCGGCTCAGTTCGAACAGAGCAAGCTCAGCATTCTTAATGTCATGTAGTTATCTAACTCTTCATTaGTGCTGTCATTATCAGTGG +
Preference number: 5 (lower is better)
Translates to: ITRLSSNRASSAFLMSCSYLTLH*CCHYQW
Trigger: CCACTGATAATGACAGCACAAATGAAGAGTTAGATA...ACTACATGACATTAAGAATGCTGAGCTTGCTCTGTTCGAACTGAGCCGAGTAAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466507.2
CDS CCA 90 bp AGAGAACACTCTCAGAAAACTCTCAAAGTGAAGACTGATGGTGCTTaGGACGCATGGTTTGTGAAATATCCTTACAACATAGATAAAACA +
Preference number: 5 (lower is better)
Translates to: REHSQKTLKVKTDGA*DAWFVKYPYNIDKT
Trigger: TGTTTTATCTATGTTGTAAGGATATTTCACAAACCATGCGTCCCAAGCACCATCAGTCTTCACTTTGAGAGTTTTCTGAGAGTGTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519379.1
CDS GCA 72 bp GCCCCAGAAGCAGCAGCAGCAGCAGCAGCCGGCAGGTaGCATCTTCCCTCAAGGCGCATGCGCGACAGCCCT +
Preference number: 6 (lower is better)
Translates to: APEAAAAAAAGR*HLPSRRMRDSP
Trigger: AGGGCTGTCGCGCATGCGCCTTGAGGGAAGATGGCACCTGCCGGCTGCTGCTGCTGCTGCTGCTTCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366661.9
ENST00000481976.6
ENST00000522399.1
CDS GCA 72 bp CGAACTTTCGAGTTGGTCCATGTACGCTGCACGGCTTaGATGACCTCCAATGCGGCCAAACCCATAGCTCTG +
Preference number: 6 (lower is better)
Translates to: RTFELVHVRCTA*MTSNAAKPIAL
Trigger: CAGAGCTATGGGTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CAA 90 bp CTCCACTGCATCAACCGTGTCTTCCCATTCATTCGAACTTTCGAGTaGGTCCATGTACGCTGCACGGCTTGCATGACCTCCAATGCGGCC +
Preference number: 6 (lower is better)
Translates to: LHCINRVFPFIRTFE*VHVRCTACMTSNAA
Trigger: GGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAATGAATGGGAAGACACGGTTGATGCAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 72 bp AGGGTTCCCCGATGTCTGTACAGCCGTGCTGAGGGCTaGAGTTGGATAGCTTTAGTGAGGTCATTCACTGCT +
Preference number: 6 (lower is better)
Translates to: RVPRCLYSRAEG*SWIALVRSFTA
Trigger: AGCAGTGAATGACCTCACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGACATCGGGGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000481976.6
ENST00000522399.1
CDS GCA 72 bp CCATTCATTCGAACTTTCGAGTTGGTCCATGTACGCTaGACGGCTTGCATGACCTCCAATGCGGCCAAACCC +
Preference number: 6 (lower is better)
Translates to: PFIRTFELVHVR*TACMTSNAAKP
Trigger: GGGTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAATGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CAA 72 bp TCGAACTTTCGAGTTGGTCCATGTACGCTGCACGGCTaGCATGACCTCCAATGCGGCCAAACCCATAGCTCT +
Preference number: 6 (lower is better)
Translates to: SNFRVGPCTLHG*HDLQCGQTHSS
Trigger: AGAGCTATGGGTTTGGCCGCATTGGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS TCA 72 bp GAAGTACAGGGTTCCCCGATGTCTGTACAGCCGTGCTaGGGGCTGCAGTTGGATAGCTTTAGTGAGGTCATT +
Preference number: 6 (lower is better)
Translates to: EVQGSPMSVQPC*GLQLDSFSEVI
Trigger: AATGACCTCACTAAAGCTATCCAACTGCAGCCCTCAGCACGGCTGTACAGACATCGGGGAACCCTGTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000481976.6
ENST00000522399.1
CDS CAA 72 bp ATCAACCGTGTCTTCCCATTCATTCGAACTTTCGAGTaGGTCCATGTACGCTGCACGGCTTGCATGACCTCC +
Preference number: 6 (lower is better)
Translates to: INRVFPFIRTFE*VHVRCTACMTS
Trigger: GGAGGTCATGCAAGCCGTGCAGCGTACATGGACCAACTCGAAAGTTCGAATGAATGGGAAGACACGGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS TCA 72 bp TTGTTAAAACCTCTGCTAAGACTTCGTGCTGGCATTTaGTCTAACCACAGCACGGGCTGGTCTGGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: LLKPLLRLRAGI*SNHSTGWSGSA
Trigger: TGCTGACCCAGACCAGCCCGTGCTGTGGTTAGATCAAATGCCAGCACGAAGTCTTAGCAGAGGTTTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000486879.2
CDS GCA 72 bp GGGCTGGTCTGGGTCAGCAATCCTTCTCCATTTAACTaGAATGTCAAACATGTCTCTCCACTGCATCAACCG +
Preference number: 6 (lower is better)
Translates to: GLVWVSNPSPFN*NVKHVSPLHQP
Trigger: CGGTTGATGCAGTGGAGAGACATGTTTGACATTGCAGTTAAATGGAGAAGGATTGCTGACCCAGACCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CAA 90 bp TTCTCAGTGTTGAGGGAAAGCAAGGAGTCACAGGGTGATGATCCCTaGGGTTCGCAGTCTGAGTCATGGAAGTTCAAAAAGGATGACTCG +
Preference number: 6 (lower is better)
Translates to: FSVLRESKESQGDDP*GSQSESWKFKKDDS
Trigger: CGAGTCATCCTTTTTGAACTTCCATGACTCAGACTGCGAACCCAAGGGATCATCACCCTGTGACTCCTTGCTTTCCCTCAACACTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000466507.2
ENST00000481976.6
ENST00000522821.5
CDS TCA 72 bp CTACTTCTTTTCCACTTGCCATCAGTGCTCCCACGATaGCCGAGTAAGCAATTACACTGGATCCTCGAGAGA +
Preference number: 6 (lower is better)
Translates to: LLLFHLPSVLPR*PSKQLHWILER
Trigger: TCTCTCGAGGATCCAGTGTAATTGCTTACTCGGTCATCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 72 bp GGGCTGCAGTTGGATAGCTTTAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAGAGGGGACAGAATCTG +
Preference number: 6 (lower is better)
Translates to: GLQLDSFSEVIH*FINSSQRGQNL
Trigger: CAGATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAATGACCTCACTAAAGCTATCCAACTGCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366662.8
ENST00000481976.6
ENST00000522399.1
CDS CCA 72 bp TGTCCCATGGCAACATGGCTGAGCCCTTTCATATACTaGCACACTTCATTATATGGCTCTAGCTGCAGACAC +
Preference number: 6 (lower is better)
Translates to: CPMATWLSPFIY*HTSLYGSSCRH
Trigger: GTGTCTGCAGCTAGAGCCATATAATGAAGTGTGCCAGTATATGAAAGGGCTCAGCCATGTTGCCATGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CAA 72 bp TTGAGGGAAAGCAAGGAGTCACAGGGTGATGATCCCTaGGGTTCGCAGTCTGAGTCATGGAAGTTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: LRESKESQGDDP*GSQSESWKFKK
Trigger: CTTTTTGAACTTCCATGACTCAGACTGCGAACCCAAGGGATCATCACCCTGTGACTCCTTGCTTTCCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366661.9
ENST00000366662.8
ENST00000466507.2
ENST00000481976.6
ENST00000522821.5
CDS CAA 90 bp AGCTCTGTGTATTCTCTTGTTTGGCAGGAAACCAGGTGTTTCATATaGCATCAGGGATCCCAAACGATCAGCCACACAAATCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SSVYSLVWQETRCFI*HQGSQTISHTNQLL
Trigger: CAGGAGCTGATTTGTGTGGCTGATCGTTTGGGATCCCTGATGCAATATGAAACACCTGGTTTCCTGCCAAACAAGAGAATACACAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 72 bp GGGCTGCAGTTGGATAGCTTTAGTGAGGTCATTCACTaGTTCATTAATTCGTCCCAGAGGGGACAGAATTTC +
Preference number: 6 (lower is better)
Translates to: GLQLDSFSEVIH*FINSSQRGQNF
Trigger: GAAATTCTGTCCCCTCTGGGACGAATTAATGAAGCAGTGAATGACCTCACTAAAGCTATCCAACTGCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366661.9
CDS GCA 72 bp ATTCTCTTGTTTGGCAGGAAACCAGGTGTTTCATATTaGATCAGGGATCCCAAACGATCAGCCACACAAATC +
Preference number: 6 (lower is better)
Translates to: ILLFGRKPGVSY*IRDPKRSATQI
Trigger: GATTTGTGTGGCTGATCGTTTGGGATCCCTGATGCAATATGAAACACCTGGTTTCCTGCCAAACAAGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS GCA 72 bp AATTTTTCCTGCTACTTCTTTTCCACTTGCCATCAGTaGTCCCACGATGACCGAGTAAGCAATTACACTGGA +
Preference number: 6 (lower is better)
Translates to: NFSCYFFSTCHQ*SHDDRVSNYTG
Trigger: TCCAGTGTAATTGCTTACTCGGTCATCGTGGGAGCACTGATGGCAAGTGGAAAAGAAGTAGCAGGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS TCA 72 bp AAGAGAACACTCTCAGAAAACTCTCAAAGTGAAGACTaGTGGTGCTTGGGACGCATGGTTTGTGAAATATCC +
Preference number: 6 (lower is better)
Translates to: KRTLSENSQSED*WCLGRMVCEIS
Trigger: GGATATTTCACAAACCATGCGTCCCAAGCACCATCAGTCTTCACTTTGAGAGTTTTCTGAGAGTGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519379.1
CDS GCA 72 bp CTCCATTTAACTGCAATGTCAAACATGTCTCTCCACTaGATCAACCGTGTCTTCCCATTCATTCGAACTTTC +
Preference number: 6 (lower is better)
Translates to: LHLTAMSNMSLH*INRVFPFIRTF
Trigger: GAAAGTTCGAATGAATGGGAAGACACGGTTGATGCAGTGGAGAGACATGTTTGACATTGCAGTTAAATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 72 bp TCAAAGTCTGATTTCTCTTCAGCTTTTAAGAGTCTTTaGTTTCGGGGTTCCTGTCTAATCACTGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: SKSDFSSAFKSL*FRGSCLITAQL
Trigger: GAGCTGTGCAGTGATTAGACAGGAACCCCGAAACCAAAGACTCTTAAAAGCTGAAGAGAAATCAGACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481976.6
ENST00000519379.1
CDS CAA 72 bp TATTCTCTTGTTTGGCAGGAAACCAGGTGTTTCATATaGCATCAGGGATCCCAAACGATCAGCCACACAAAT +
Preference number: 6 (lower is better)
Translates to: YSLVWQETRCFI*HQGSQTISHTN
Trigger: ATTTGTGTGGCTGATCGTTTGGGATCCCTGATGCAATATGAAACACCTGGTTTCCTGCCAAACAAGAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS TCA 72 bp TTATCCCTTCATAAAACTGTCCCATGGCAACATGGCTaGGCCCTTTCATATACTGGCACACTTCATTATATG +
Preference number: 6 (lower is better)
Translates to: LSLHKTVPWQHG*ALSYTGTLHYM
Trigger: CATATAATGAAGTGTGCCAGTATATGAAAGGGCTCAGCCATGTTGCCATGGGACAGTTTTATGAAGGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 72 bp AGATACTTTACTTTAAGATACTCAGGGCTAGCCTTCTaGCCTGGGAGAGGATCATTCAGCATAACTTTTGTT +
Preference number: 6 (lower is better)
Translates to: RYFTLRYSGLAF*PGRGSFSITFV
Trigger: AACAAAAGTTATGCTGAATGATCCTCTCCCAGGCCAGAAGGCTAGCCCTGAGTATCTTAAAGTAAAGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CAA 90 bp GTGGAGAAGAGTCTGTGTTTAGCACCTCAATCATCGATCTTAACGTaGGAAACGTTTCTGATACTGATGGAAGAGTCTTATAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: VEKSLCLAPQSSILT*ETFLILMEESYKKV
Trigger: CACCTTCTTATAAGACTCTTCCATCAGTATCAGAAACGTTTCCAACGTTAAGATCGATGATTGAGGTGCTAAACACAGACTCTTCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8
CDS CCA 72 bp TCTCAGAAAACTCTCAAAGTGAAGACTGATGGTGCTTaGGACGCATGGTTTGTGAAATATCCTTACAACATA +
Preference number: 6 (lower is better)
Translates to: SQKTLKVKTDGA*DAWFVKYPYNI
Trigger: TATGTTGTAAGGATATTTCACAAACCATGCGTCCCAAGCACCATCAGTCTTCACTTTGAGAGTTTTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519379.1
CDS CAA 72 bp AGTCTGTGTTTAGCACCTCAATCATCGATCTTAACGTaGGAAACGTTTCTGATACTGATGGAAGAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: SLCLAPQSSILT*ETFLILMEESY
Trigger: ATAAGACTCTTCCATCAGTATCAGAAACGTTTCCAACGTTAAGATCGATGATTGAGGTGCTAAACACAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366661.9
ENST00000366662.8