RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC12 (Homo sapiens)

Ensembl gene IDs: ENSG00000149292

Ensembl transcript IDs: ENST00000314756.7, ENST00000393020.5, ENST00000429951.5, ENST00000442859.5, ENST00000455306.5, ENST00000462711.2, ENST00000464224.5, ENST00000480233.1, ENST00000483239.6, ENST00000489064.5, ENST00000494714.5, ENST00000496311.1, ENST00000524580.6, ENST00000525965.5, ENST00000525989.1, ENST00000527362.5, ENST00000527781.1, ENST00000529221.6, ENST00000529850.5, ENST00000531164.5

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTCTGGGCGAGATGCAGCAGCAGGGCAAAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACAAGAGGGCGGCCAACAGCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: QSGRDAAAGQSSAAG*PGPWRTRGRPTAWP
Trigger: GGGCCAGGCTGTTGGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp AGGTGGTTGATGATCAGGCTCCGTCCGCTCTCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTCTGCTGCCGGATGGCCAGGACCTTG +
Preference number: 1 (lower is better)
Translates to: RWLMIRLRPLSVWAR*SSRAKLCCRMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGAGAGCGGACGGAGCCTGATCATCAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp GCCGGATGGCCAGGACCTTGGAGGACAAGAGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTCCTCGT +
Preference number: 1 (lower is better)
Translates to: AGWPGPWRTRGRPTA*PCHGVSLAHAGFPR
Trigger: ACGAGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp GAGCAGCAAATCTGGGCTCAGCTGTGCACAGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGGCCGTCTTCTGTGTGTCACTGCCTG +
Preference number: 1 (lower is better)
Translates to: EQQIWAQLCTASPEQ*LRSPARPSSVCHCL
Trigger: CAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGATTTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR TCA 90 bp AGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: SRVSKGGVGAPGKWR*GLLKDGAGIFHAAW
Trigger: CCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR CCA 90 bp AGGACCTTGGAGGACAAGAGGGCGGCCAACAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGCTGGTTTTCCTCGTTCCTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: RTLEDKRAANSLALS*CITSTRWFSSFLLH
Trigger: GTGCAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCCTCTTGTCCTCCAAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp AAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGGCAGCGTTGCCCACCAGAACCTCAT +
Preference number: 1 (lower is better)
Translates to: KGPSLAGKTQRWAPP*SYQGRGQRCPPEPH
Trigger: ATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp TGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGC +
Preference number: 1 (lower is better)
Translates to: WCRGSWQVEMRPSER*RWYFPCCLEGLHGS
Trigger: GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR CCA 90 bp CGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTGCTTACCTTGGGATCTGTCTTCAGA +
Preference number: 1 (lower is better)
Translates to: RVVGSALRFPMMAMH*HRAEELLTLGSVFR
Trigger: TCTGAAGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCATGGGAAACCTCAGTGCTGAGCCCACTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp ACAAGACCTGCAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTTGCCCA +
Preference number: 1 (lower is better)
Translates to: TRPAKGPSLAGKTQR*APPCSYQGRGQRCP
Trigger: TGGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCAGGTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp AGGGGATCTGGTCAGGCTTGGAAAGGGTCTCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTCCTGAATCCAGCAGTTCGTGGGCTT +
Preference number: 1 (lower is better)
Translates to: RGSGQAWKGSPGGSW*SRLCSFLNPAVRGL
Trigger: AAGCCCACGAACTGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp ACAAGGGGATCTGGTCAGGCTTGGAAAGGGTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCTTTCCTGAATCCAGCAGTTCGTGGG +
Preference number: 1 (lower is better)
Translates to: TRGSGQAWKGSPGGS*WSRLCSFLNPAVRG
Trigger: CCCACGAACTGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp CGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGT +
Preference number: 1 (lower is better)
Translates to: RGSWQVEMRPSERWR*YFPCCLEGLHGSMC
Trigger: ACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR GCA 90 bp ACGGCCGTCTTCTGTGTGTCACTGCCTGCAAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTTGGGCACC +
Preference number: 1 (lower is better)
Translates to: TAVFCVSLPASFNKT*KRSVFSREDATLGT
Trigger: GGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGACGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp AAGCCTGGATCAGTCATGGTCCTGCCAGGAAACAGATGGCACACTTaGACTGGGCAACTGAGGAGAGTTGAATACAGGGACCTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: KPGSVMVLPGNRWHT*TGQLRRVEYRDLFH
Trigger: GTGGAAGAGGTCCCTGTATTCAACTCTCCTCAGTTGCCCAGTGCAAGTGTGCCATCTGTTTCCTGGCAGGACCATGACTGATCCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp GAGCAATGCCTGCGTTCACCTGCACGGCCGTCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGACCTGCAAAAGGTCCGTCTTTAGCA +
Preference number: 1 (lower is better)
Translates to: EQCLRSPARPSSVCH*LQALTRPAKGPSLA
Trigger: TGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp CTTGGGATCTGTCTTCAGAACGCCTGTGAGTGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCAGACTTGGAATCTTTCTTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: LGICLQNACECRENT*KVGLEPDLESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGACAGATCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp CATGGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTaGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGT +
Preference number: 1 (lower is better)
Translates to: HGLGTVACGVGWLST*SRSWTSCLTALHLS
Trigger: ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR CCA 90 bp AAATTTGCAGATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: KFADSTNWNKPCLQG*CRGSWQVEMRPSER
Trigger: TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTGCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR CCA 90 bp AAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGGGTaGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCT +
Preference number: 1 (lower is better)
Translates to: KDESHGLGTVACGVG*LSTWSRSWTSCLTA
Trigger: AGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR TCA 90 bp CACGCTGGTTTTCCTCGTTCCTGCTGCACACTGCTTGCCAGAGCTTaGGAACAGACACACAGACCATTTCTTCAACTGCATCATTTCCTG +
Preference number: 1 (lower is better)
Translates to: HAGFPRSCCTLLARA*EQTHRPFLQLHHFL
Trigger: CAGGAAATGATGCAGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACCAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 90 bp GTTTCATATAAGCCTGGATCAGTCATGGTCCTGCCAGGAAACAGATaGCACACTTGCACTGGGCAACTGAGGAGAGTTGAATACAGGGAC +
Preference number: 1 (lower is better)
Translates to: VSYKPGSVMVLPGNR*HTCTGQLRRVEYRD
Trigger: GTCCCTGTATTCAACTCTCCTCAGTTGCCCAGTGCAAGTGTGCCATCTGTTTCCTGGCAGGACCATGACTGATCCAGGCTTATATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp TGTGCATTTTTCATCACACTTGAGAGCCCACTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAGTTTCATATAAGCCTGGATCAGTCA +
Preference number: 1 (lower is better)
Translates to: CAFFITLESPLTIHQ*LLIVLKFHISLDQS
Trigger: TGACTGATCCAGGCTTATATGAAACTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 90 bp TGCTTGCCAGAGCTTGAGAACAGACACACAGACCATTTCTTCAACTaGATCATTTCCTGCTGTGGAAAAACACCTTCTTATGACCTCGTT +
Preference number: 1 (lower is better)
Translates to: CLPELENRHTDHFFN*IISCCGKTPSYDLV
Trigger: AACGAGGTCATAAGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp TTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAGGGCGGTGGCGGGGGTaGATCCACACTGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: FNQLEQAVSPRVVSGLLAGRWRG*IHTGEG
Trigger: TCCCTCTCCAGTGTGGATCCACCCCCGCCACCGCCC...TGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR-3UTR TCA 90 bp CTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCGGACCTCTTCCACGGTaGAGGCAGGGCTTAGGGAAC +
Preference number: 2 (lower is better)
Translates to: LLTPGQEAQAAIPKFLTGGPLPR*RQGLGN
Trigger: GTTCCCTAAGCCCTGCCTTCACCGTGGAAGAGGTCC...GCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 90 bp GCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCCTCCGAGCTGAGCAGCTTCATCATA +
Preference number: 2 (lower is better)
Translates to: ATLGTSMQLPRQRAA*PTRTSSSELSSFII
Trigger: TATGATGAAGCTGCTCAGCTCGGAGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp GGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 2 (lower is better)
Translates to: GGSSSHPQIPHRPPCVFGTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...CCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
3UTR CAA 90 bp AACAAGACCTGCAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTTGCCC +
Preference number: 2 (lower is better)
Translates to: NKTCKRSVFSREDAT*GTSMQLPRQRAALP
Trigger: GGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCAGGTCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR TCA 90 bp TCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCCTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 2 (lower is better)
Translates to: STSSSHLARRLKQPSPNSLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...GGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp GGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTTAGGACAAGTTTGGGGCGGTaGCGGGGGTGGATCCACACT +
Preference number: 2 (lower is better)
Translates to: GAGIFHAAWKVCMVACVRTSLGR*RGWIHT
Trigger: AGTGTGGATCCACCCCCGCCACCGCCCCAAACTTGT...CCTAACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR CAA 90 bp AGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTaGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCT +
Preference number: 2 (lower is better)
Translates to: RQHHTSLQGKDESHG*GTVACGVGWLSTWS
Trigger: AGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp CGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTCCTGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: RPTAWPCHGVSLAHAGFPVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...AGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp ACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGC +
Preference number: 2 (lower is better)
Translates to: TNWNKPCLQGWCRGSWQVRPSER*RWYFPC
Trigger: GCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCT...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR-3UTR CCA 90 bp GTACCCTCGGGTTCCAAATTTGCAGATTCAACCAACTGGAACAAGCCGTGTCTCCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: VPSGSKFADSTNWNKPCLPCLQG*CRGSWQ
Trigger: TTGCCAGGAGCCCCGACACCACCCTTGGAGACACGG...GAGACACGGCTTGTTCCAGTTGGTTGAATCTGCAAATTTGGAACCCGAGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR CAA 90 bp AACAAGGGGATCTGGTCAGGCTTGGAAAGGGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTCTTTCCTGAATCCAGCAGTTCGTGG +
Preference number: 2 (lower is better)
Translates to: NKGIWSGLERVSRRF*VVTAVFFPESSSSW
Trigger: CCACGAACTGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR TCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGC +
Preference number: 2 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGPGKWR*GLLKDG
Trigger: GCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGG...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR TCA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGC +
Preference number: 2 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCPGKWR*GLLKDG
Trigger: GCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGG...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp AAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 2 (lower is better)
Translates to: KFLTGRHVSSGSGLSTEVLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...AACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR TCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGGGAGATGAGGCCTTCTaGAAGATGGCGCTGGTATTT +
Preference number: 2 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWGDEAF*KMALVF
Trigger: AAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCC...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp CAGATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QIQPTGTSRVSKGGVGAPSERWR*YFPCCL
Trigger: CAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA...AGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR-3UTR CCA 90 bp CACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCTGCCAGGAAACAGATaGCACACTTGCACTGGGCAA +
Preference number: 2 (lower is better)
Translates to: HLHSPNLRDKGSLKTQVHLPGNR*HTCTGQ
Trigger: TTGCCCAGTGCAAGTGTGCCATCTGTTTCCTGGCAG...ATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp AAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KFLTGRHVSSGSGLSTEVITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...AACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 90 bp TCTGTCTTCAGAACGCCTGTGAGTGCAGGGAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGGAATCTTTCTTCCAGAGCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: SVFRTPVSAGRTPGR*AWNQTWNLSSRAKS
Trigger: AGACTTGGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTCGCTGGTATTTTCCATaGTGCCTGGAAGGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVRWYFP*CLEGLH
Trigger: ATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCG...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCCGCTGGTATTTTCCATaGTGCCTGGAAGGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCRWYFP*CLEGLH
Trigger: ATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCG...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp CTCAGAACACCAGCAGCTCTTGTCAGGATTCCTCCATCCTGGCTGTTTAGTAAATCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: LRTPAALVRIPPSWLFSKSVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...TTTACTAAACAGCCAGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTATTTTCCATGCTGCCTaGAAGGTCTGCATGGTAGCA +
Preference number: 2 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSIFHAA*KVCMVA
Trigger: TGCTACCATGCAGACCTTCCAGGCAGCATGGAAAAT...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWSERWR*YFPCCL
Trigger: CAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRPCLQG*CRGSWQ
Trigger: TTGCCAGGAGCCCCGACACCACCCTTGGAGACACGG...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTCTCAGTTTCCTCATCTaGAACAAGCCGTGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSLSFLI*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGATGAGGAAACTGAG...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp CAAGGCCTCCTCAACAATTTTCAGAGAGGAAGAAAGGGTCCGGCTCAGAACACCGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 2 (lower is better)
Translates to: QGLLNNFQRGRKGPAQNTEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...GGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 90 bp GATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTaGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTG +
Preference number: 2 (lower is better)
Translates to: DESHGLGTVACGVGW*STWSRSWTSCLTAL
Trigger: CAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR TCA 90 bp CCCACCAGAACCTCATCCTCCGAGCTGAGCAGCTTCATCATAACGCTCAACTTTGCAACTGAGGAGAGTTaGATACAGGGACCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: PTRTSSSELSSFIITLNFATEES*IQGPLP
Trigger: TGGAAGAGGTCCCTGTATTCAACTCTCCTCAGTTGC...AAAGTTGAGCGTTATGATGAAGCTGCTCAGCTCGGAGGATGAGGTTCTGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTGGTATTTTCCATGCTaGCTGGAAGGTCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCWYFPC*LEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCA...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGGACCAGTTGCTTAACTaGTTTGCACCTCAGTTTCCT +
Preference number: 2 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWDQLLN*FAPQFP
Trigger: AGGAAACTGAGGTGCAAAGCAGTTAAGCAACTGGTC...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp ATTCCTCCATCCTGGCTGTTTAGTAAAGACAGGCACCTTCTGCTCACCTCCACAGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: IPPSWLFSKDRHLLLTSTGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...TGTGGAGGTGAGCAGAAGGTGCCTGTCTTTACTAAACAGCCAGGATGGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp GGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTTAGGATTTTCCATGCTGCCTaGAAGGTCTGCATGGTAGCA +
Preference number: 2 (lower is better)
Translates to: GAGIFHAAWKVCMVACVRIFHAA*KVCMVA
Trigger: TGCTACCATGCAGACCTTCCAGGCAGCATGGAAAAT...CCTAACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR-3UTR CCA 90 bp GCAGTGTTGGCCTCCTTATCCGAGAAATCAAGAAATGACACCAGCGCTTCCAATGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: AVLASLSEKSRNDTSASNGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...ATTGGAAGCGCTGGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGACTCAGTTTCCTCATCTaGAACAAGCCGTGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: TSLQGKDESHGLGTVACGLSFLI*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGATGAGGAAACTGAG...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp GTGTGTCACTGCCTGCAAGCTTTAACAAGACCTGCAAAAGGTCCGTCTTTAGCACCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: VCHCLQALTRPAKGPSLAPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...TGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp GCAGTGTTGGCCTCCTTATCCGAGAAATCAAGAAATGACACCAGCGCTTCCAATTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: AVLASLSEKSRNDTSASNSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...ATTGGAAGCGCTGGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 90 bp ACACGCTGGTTTTCCTCGTTCCTGCTGCACACTGCTTGCCAGAGCTaGAGAACAGACACACAGACCATTTCTTCAACTGCATCATTTCCT +
Preference number: 2 (lower is better)
Translates to: TRWFSSFLLHTACQS*RTDTQTISSTASFP
Trigger: AGGAAATGATGCAGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACCAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp GTACCCTCGGGTTCCAAATTTGCAGATTCAACCAACTGGAACAAGCCGTGTCTCTGGTATTTTCCATGCTaGCTGGAAGGTCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: VPSGSKFADSTNWNKPCLWYFPC*LEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCA...GAGACACGGCTTGTTCCAGTTGGTTGAATCTGCAAATTTGGAACCCGAGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR-3UTR CCA 90 bp GCAGTGTTGGCCTCCTTATCCGAGAAATCAAGAAATGACACCAGCGCTTCCAATAGCCTGGATCAGTCATaGTCCTGCCAGGAAACAGAT +
Preference number: 2 (lower is better)
Translates to: AVLASLSEKSRNDTSASNSLDQS*SCQETD
Trigger: ATCTGTTTCCTGGCAGGACCATGACTGATCCAGGCT...ATTGGAAGCGCTGGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGCATGTGGAGTGGGGTaGTTGAGTACCTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHACGVG*LSTWSR
Trigger: TCTAGACCAGGTACTCAACCACCCCACTCCACATGC...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGGGGGACAGTTGCATGTaGAGTGGGGTGGTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERGDSCM*SGVVEY
Trigger: GTACTCAACCACCCCACTCCACATGCAACTGTCCCC...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp TCAACTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 2 (lower is better)
Translates to: STFYPVLLLLPELHDNYSRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...CGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGC +
Preference number: 2 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMRPSER*RWYFPC
Trigger: GCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR GCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGAGATCTTGGACCAGTTaGTTAACTGCTTTGCACCTC +
Preference number: 2 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMRSWTS*LTALHL
Trigger: GAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATATTTTCCATGCTGCCTaGAAGGTCTGCATGGTAGCA +
Preference number: 2 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHIFHAA*KVCMVA
Trigger: TGCTACCATGCAGACCTTCCAGGCAGCATGGAAAAT...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCACCTGGTCTAGATCTTaGACCAGTTGCTTAACTGCT +
Preference number: 2 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRTWSRS*TSCLTA
Trigger: AGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGT...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CCA 90 bp CGAGCTGAGCAGCTTCATCATAACGCTCAACTTTTTATCCAGTCTTATTACTTCAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 2 (lower is better)
Translates to: RAEQLHHNAQLFIQSYYFRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...GAAGTAATAAGACTGGATAAAAAGTTGAGCGTTATGATGAAGCTGCTCAGCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp CAGCTTCATCATAACGCTCAACTTTTTATCCAGTCTTATTACTTCTTCCCGAGCCTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: QLHHNAQLFIQSYYFFPSLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...GCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTTGAGCGTTATGATGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp AAGACACAGGTTCATCATGAGTCCCAGGAGTGTGTAGATAACCTCTCTGAACAGAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 2 (lower is better)
Translates to: KTQVHHESQECVDNLSEQNCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...CTGTTCAGAGAGGTTATCTACACACTCCTGGGACTCATGATGAACCTGTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR GCA 90 bp TCAACTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGTTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: STFYPVLLLLPELHDNYSFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...CGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp CGAGATGCAGCAGCAGGGCAAAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACAAGAGGGCGGCCAACA +
Preference number: 3 (lower is better)
Translates to: RDAAAGQSSAAG*PGPWRTRGRPT
Trigger: TGTTGGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCTGCTGCATCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp TCAGTCTGGGCGAGATGCAGCAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACCTTGGAGGACAAGAGG +
Preference number: 3 (lower is better)
Translates to: SVWARCSSRAKL*CRMARTLEDKR
Trigger: CCTCTTGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp GTGCACAGCTTCCCCAGAGCAATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTGTCACTGCCTGCAAGC +
Preference number: 3 (lower is better)
Translates to: VHSFPRAMPAFT*TAVFCVSLPAS
Trigger: GCTTGCAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp CCAGGACCTTGGAGGACAAGAGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCACTAGCACACGCTGGT +
Preference number: 3 (lower is better)
Translates to: PGPWRTRGRPTA*PCHGVSLAHAG
Trigger: ACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCCTCTTGTCCTCCAAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTaGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCGC +
Preference number: 3 (lower is better)
Translates to: NKPCLQGWCRGS*QVEMRPSERWR
Trigger: GCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR-3UTR CAA 90 bp TTAGCAGGGAAGACGCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: LAGKTQRWAPPCSYQGRGGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp TCTTTAGCAGGGAAGACGCAACGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGGCAGCGTTGCCCACCA +
Preference number: 3 (lower is better)
Translates to: SLAGKTQRWAPP*SYQGRGQRCPP
Trigger: TGGTGGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp GAGGACAAGAGGGCGGCCAACAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGCTGGTTTTCCTCGTTC +
Preference number: 3 (lower is better)
Translates to: EDKRAANSLALS*CITSTRWFSSF
Trigger: GAACGAGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCCTCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp GATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCT +
Preference number: 3 (lower is better)
Translates to: DSTNWNKPCLQG*CRGSWQVEMRP
Trigger: AGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR CCA 72 bp GGCTCAGCACTGAGGTTTCCCATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTGCTTACCTTGGGATCT +
Preference number: 3 (lower is better)
Translates to: GSALRFPMMAMH*HRAEELLTLGS
Trigger: AGATCCCAAGGTAAGCAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCATGGGAAACCTCAGTGCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
3UTR CCA 72 bp GCAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: AKGPSLAGKTQR*APPCSYQGRGQ
Trigger: CTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CAA 90 bp CGGCTCAGAACACCAGCAGCTCTTGTCAGGATTCCTCCATCCTGGCTGTTTAGTGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 3 (lower is better)
Translates to: RLRTPAALVRIPPSWLFSVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...ACTAAACAGCCAGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTCTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR TCA 72 bp TCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGCGCTGGTATTTTCCAT +
Preference number: 3 (lower is better)
Translates to: SKGGVGAPGKWR*GLLKDGAGIFH
Trigger: ATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR GCA 72 bp GCTTACCTTGGGATCTGTCTTCAGAACGCCTGTGAGTaGAGGGAGAACACCTGGAAGGTTGGCCTGGAACCA +
Preference number: 3 (lower is better)
Translates to: AYLGICLQNACE*RENTWKVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGACAGATCCCAAGGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp CTGCGTTCACCTGCACGGCCGTCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGACCTGCAAAAGGTCCG +
Preference number: 3 (lower is better)
Translates to: LRSPARPSSVCH*LQALTRPAKGP
Trigger: CGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp GGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTG +
Preference number: 3 (lower is better)
Translates to: GSWQVEMRPSER*RWYFPCCLEGL
Trigger: CAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR CCA 72 bp TCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGGGTaGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGC +
Preference number: 3 (lower is better)
Translates to: SHGLGTVACGVG*LSTWSRSWTSC
Trigger: GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR CCA 72 bp GACACCAGCGCTTCCAATAATCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGTCCGCTCTCAGTCTGG +
Preference number: 3 (lower is better)
Translates to: DTSASNNLVRSR*LMIRLRPLSVW
Trigger: CCAGACTGAGAGCGGACGGAGCCTGATCATCAACCACCTTGACCTGACCAGATTATTGGAAGCGCTGGTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR TCA 72 bp ACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATGAGTCCCAGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: TSTAQTSETKGA*RHRFIMSPRSV
Trigger: CACACTCCTGGGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
3UTR CCA 72 bp GGTCAGGCTTGGAAAGGGTCTCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTCCTGAATCCAGCAGTT +
Preference number: 3 (lower is better)
Translates to: GQAWKGSPGGSW*SRLCSFLNPAV
Trigger: AACTGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp TCTGGTCAGGCTTGGAAAGGGTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCTTTCCTGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: SGQAWKGSPGGS*WSRLCSFLNPA
Trigger: TGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp TGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGT +
Preference number: 3 (lower is better)
Translates to: WQVEMRPSERWR*YFPCCLEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCACTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
3UTR CCA 72 bp TGTCTTCAGAACGCCTGTGAGTGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCAGACTTGGAATCTTTC +
Preference number: 3 (lower is better)
Translates to: CLQNACECRENT*KVGLEPDLESF
Trigger: GAAAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp GATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTaGATGGTAGCATGTGTTAGGGGTAACAAGTTTGGG +
Preference number: 3 (lower is better)
Translates to: DGAGIFHAAWKV*MVACVRGNKFG
Trigger: CCCAAACTTGTTACCCCTAACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
3UTR CCA 72 bp AGAACACCAGCAGCTCTTGTCAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGGCACCTTCTGCTCACC +
Preference number: 3 (lower is better)
Translates to: RTPAALVRIPPS*LFSKDRHLLLT
Trigger: GGTGAGCAGAAGGTGCCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CAA 90 bp GAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTGTGGAGTGGGGTGGTaGAGTACCTGGTCTAGATCT +
Preference number: 3 (lower is better)
Translates to: EFKRQHHTSLQGKDESHGCGVGW*STWSRS
Trigger: AGATCTAGACCAGGTACTCAACCACCCCACTCCACA...CCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR-3UTR CAA 90 bp GTGTGTCACTGCCTGCAAGCTTTAACAAGACCTGCAAAAGGTCCGTCTTTAGCAGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 3 (lower is better)
Translates to: VCHCLQALTRPAKGPSLAEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...TGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp TTCTGTGTGTCACTGCCTGCAAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACG +
Preference number: 3 (lower is better)
Translates to: FCVSLPASFNKT*KRSVFSREDAT
Trigger: CGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CCA 72 bp TGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTaGACCAGTTGCTTAACTGCTTTGCACCTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: CGVGWLSTWSRS*TSCLTALHLSF
Trigger: GAAACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR TCA 72 bp TTTCCTCGTTCCTGCTGCACACTGCTTGCCAGAGCTTaGGAACAGACACACAGACCATTTCTTCAACTGCAT +
Preference number: 3 (lower is better)
Translates to: FPRSCCTLLARA*EQTHRPFLQLH
Trigger: ATGCAGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp TTCATCACACTTGAGAGCCCACTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAGTTTCATATAAGCCTG +
Preference number: 3 (lower is better)
Translates to: FITLESPLTIHQ*LLIVLKFHISL
Trigger: CAGGCTTATATGAAACTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAGTGGGCTCTCAAGTGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR-3UTR CAA 90 bp CTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGTGCAAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 3 (lower is better)
Translates to: LFIQSYYFFPSFMITIRARTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...TGCACGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR GCA 72 bp AGACACACAGACCATTTCTTCAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCTTATGACCTCGTTGTC +
Preference number: 3 (lower is better)
Translates to: RHTDHFFNCIIS*CGKTPSYDLVV
Trigger: GACAACGAGGTCATAAGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTTGAAGAAATGGTCTGTGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 72 bp AGCAGGGCAAAGCTCTGCTGCCGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCCAACAGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRAKLCCRMART*EDKRAANSLAL
Trigger: CAGGGCCAGGCTGTTGGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGGGCGGTGGCGGGGGTaGATCCACACTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVGRWRG*IHTGEG
Trigger: TCCCTCTCCAGTGTGGATCCACCCCCGCCACCGCCC...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCGGCTCTGAAGGCCAGTaGAGGACCAGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WPGGSSSHPQIPHRPPCVGSEGQ*RTSSQG
Trigger: CCCCTGGGAGCTGGTCCTGCACTGGCCTTCAGAGCC...GACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp GACGCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTTGCCCGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGG +
Preference number: 4 (lower is better)
Translates to: DATLGTSMQLPRQRAALPASPEQ*LRSPAR
Trigger: CCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGC...GGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 72 bp GGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCCTCCGAGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTSMQLPRQRAA*PTRTSSSELSS
Trigger: GCTGCTCAGCTCGGAGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGGGCAGAGGGCAGCGTTaGCCACCAGAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRGRGQR*PPEPHP
Trigger: AGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCC...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LARRLKQPSPNSSQAAMCHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...ACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp TCACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCACCCCCTACGCTAGGGTaGGAGGGCCAGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPPQPKPQRQREPEDTGSPPTLG*EGQSQV
Trigger: CACCTGGCTCTGGCCCTCTCACCCTAGCGTAGGGGG...TGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp GGGCGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTGGACCTCTTCCACGGTaGAGGCAGGGCTTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRPTAWPCHGVSLAHAGFGPLPR*RQGLGN
Trigger: GTTCCCTAAGCCCTGCCTTCACCGTGGAAGAGGTCC...AAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSERAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PPHTWPGGSSSHPQIPHRMPAFT*TAVFCV
Trigger: CACACAGAAGACGGCCGTGCAGGTGAACGCAGGCAT...CCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRMPAFT*TAVFCV
Trigger: CACACAGAAGACGGCCGTGCAGGTGAACGCAGGCAT...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGGCCAAGACCTTCCCATaGTCTGGGGCCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALAKTFP*SGAQSS
Trigger: GCTGCTTTGGGCCCCAGAGCATGGGAAGGTCTTGGC...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp TCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: STSSSHLARRLKQPSPNSHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...GGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp GGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTTAGGGGGCGGTGGCGGGGGTaGATCCACACTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GAGIFHAAWKVCMVACVRGRWRG*IHTGEG
Trigger: TCCCTCTCCAGTGTGGATCCACCCCCGCCACCGCCC...CCTAACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAACAAGTTTGGGGCGGTaGCGGGGGTGGATCCACACT +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERTSLGR*RGWIHT
Trigger: AGTGTGGATCCACCCCCGCCACCGCCCCAAACTTGT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR CCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGTGTCGGGGCTCCTaGCAAGTGGAGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERWCRGS*QVEMRP
Trigger: AGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCA...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp GGGAAGACGCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGTATCTGCCCAACGGTATaGAGGTTAGAAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GKTQRWAPPCSYQGRGQRICPTV*RLEGRR
Trigger: GCGCCTGCCTTCTAACCTTCATACCGTTGGGCAGAT...ACGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAATCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSESVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAACTCTGGGCTCAGCTGTaGACAGCTTCCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSELWAQL*TASPEQ
Trigger: TTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAG...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGSSSHPQIPHRPPCVFGGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...CCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTTGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LARRLKQPSPNSSQAAMCCRENT*KVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCA...ACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp CTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATTCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: LTGRHVSSGSGLSTEVSHSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...ATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp CTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLTPGQEAQAAIPKFLTGVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...GCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVESRAKL*CRMART
Trigger: GGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTGGCAGAGGGCAGCGTTaGCCACCAGAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KFLTGRHVSSGSGLSTEVGRGQR*PPEPHP
Trigger: AGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCC...AACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCATCTGGGCTCAGCTGTaGACAGCTTCCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: STSSSHLARRLKQPSPNSIWAQL*TASPEQ
Trigger: TTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAT...GGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGCAGAACGCCTGTGAGTaGAGGGAGAACACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALQNACE*RENTWV
Trigger: AACCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTG...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527362.5
CDS-3UTR CCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERSLALS*CITSTR
Trigger: GCGTGTGCTAGTGATACACCATGACAGGGCCAGGCT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGGCGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRPTAWPCHGVSLAHAGFMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...AAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSEGKTQR*APPCSY
Trigger: GTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTACAAGTTTGGGGCGGTaGCGGGGGTGGATCCACACT +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSTSLGR*RGWIHT
Trigger: AGTGTGGATCCACCCCCGCCACCGCCCCAAACTTGT...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGPCLQG*CRGSWQ
Trigger: TTGCCAGGAGCCCCGACACCACCCTTGGAGACACGG...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEPCLQG*CRGSWQ
Trigger: TTGCCAGGAGCCCCGACACCACCCTTGGAGACACGG...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGCATGTGGAGTGGGGTaGTTGAGTACCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVACGVG*LSTWSR
Trigger: TCTAGACCAGGTACTCAACCACCCCACTCCACATGC...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCTGCAGGGAGAACACCTaGGTTTGCAGCTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LLTPGQEAQAAIPKFLTGCRENT*VCSLGF
Trigger: AAACCCCAAGCTGCAAACCCAGGTGTTCTCCCTGCA...GCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527362.5
CDS-3UTR TCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp AAGGTCTGCATGGTAGCATGTGTTAGGGGTAACAAGTTTGGGGCGGTGGCGGGGCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: KVCMVACVRGNKFGAVAGPGKWR*GLLKDG
Trigger: GCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGG...CCCCGCCACCGCCCCAAACTTGTTACCCCTAACACATGCTACCATGCAGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR TCA 90 bp CAAGGCCTCCTCAACAATTTTCAGAGAGGAAGAAAGGGTCCGGCTCAGAACACCTCCTCTGCTCGGCTCTaGAGGCCAGTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QGLLNNFQRGRKGPAQNTSSARL*RPVQDQ
Trigger: CTGGTCCTGCACTGGCCTTCAGAGCCGAGCAGAGGA...GGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGTTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSSHLARRLKQPSPNSSQGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...CTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp AGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SLQGKDESHGLGTVACGVRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...CACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCAAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SPPQPKPQRQREPEDTGSRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...TGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp TCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: STSSSHLARRLKQPSPNSTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...GGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp TCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSSHLARRLKQPSPNSSQTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...CTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp CAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGATGAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QAAMCLRVVGSALRFPMMKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...CATCATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp AAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTCGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KFLTGRHVSSGSGLSTEVRWAPP*SYQGRG
Trigger: CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACG...AACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGACAAATTGGAGATGACTaGTCTCGGCAGGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERQIGDD*SRQALW
Trigger: CCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTG...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAACATCTCTTCCCACCTaGGAGGAGACAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERTSLPT*EETELQ
Trigger: CTGAAGCTCTGTCTCCTCGCAGGTGGGAAGAGATGT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGGCTGCCTGGAAGGTCTaGATGGTAGCATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWAAWKV*MVACVR
Trigger: CCTAACACATGCTACCATGCAGACCTTCCAGGCAGC...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR GCA 90 bp TTCCTCCATCCTGGCTGTTTAGTAAAGACAGGCACCTTCTGCTCACCTCCACAGAGGCAGGCGCGCGGGTaGATGGACAGGAGACAACCT +
Preference number: 4 (lower is better)
Translates to: FLHPGCLVKTGTFCSPPQRQARG*MDRRQP
Trigger: AGGTTGTCTCCTGTCCATGCACCCGCGCGCCTGCCT...CTGTGGAGGTGAGCAGAAGGTGCCTGTCTTTACTAAACAGCCAGGATGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp GCAGTGTTGGCCTCCTTATCCGAGAAATCAAGAAATGACACCAGCGCTTCCAATGGCCGCACGCACTGTTaGCCAGCAACCGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLASLSEKSRNDTSASNGRTHC*PATAPR
Trigger: CCTGGGAGCGGTTGCTGGGCAACAGTGCGTGCGGCC...ATTGGAAGCGCTGGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp TCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SQAAMCLRVVGSALRFPMSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...CATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: ECVDNLSEQVHILLTPGQGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...CTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGATGGCAATGCACTGGCACATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRVVGSALRFPMMAMHWHMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...GTGCCAGTGCATTGCCATCATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGATCTCGGCAGGCACTCTaGGCTCAGCTGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGSRQAL*AQLCTA
Trigger: AGCTGTGCACAGCTGAGCCCAGAGTGCCTGCCGAGA...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTCCGTGTCTCCAAGGGTaGTGTCGGGGCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RWRWYFPCCLEGLHGSMCPCLQG*CRGSWQ
Trigger: TTGCCAGGAGCCCCGACACCACCCTTGGAGACACGG...ACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp GAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGACCTTCCCATGCTCTaGGGCCCAAAGCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ECVDNLSEQVHILLTPGQDLPML*GPKQRP
Trigger: AGGACGCTGCTTTGGGCCCCAGAGCATGGGAAGGTC...CTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp TCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGCTGCCAGGAAACAGATaGCACACTTGCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSHLARRLKQPSPNSSQLPGNR*HTCTGQ
Trigger: TTGCCCAGTGCAAGTGTGCCATCTGTTTCCTGGCAG...CTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 72 bp ACCAGCGCTTCCAATAATCTGGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCGCTCTCAGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TSASNNLVRSRW*MIRLRPLSVWA
Trigger: CGCCCAGACTGAGAGCGGACGGAGCCTGATCATCAACCACCTTGACCTGACCAGATTATTGGAAGCGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp CCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PHPPHTWPGGSSSHPQIPDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...AGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp CAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGATGGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: QAAMCLRVVGSALRFPMMETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...CATCATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp TTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAGGAGATGAGGCCTTCTaGAAGATGGCGCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: FNQLEQAVSPRVVSGLLAGDEAF*KMALVF
Trigger: AAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCC...TGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR TCA 90 bp AGGGAAGACGCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCAGCGGGGTTGCGGCTTAACTaGATAATCGCTAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: REDATLGTSMQLPRQRAAGLRLN*IIARVS
Trigger: AGAAACCCTAGCGATTATTCAGTTAAGCCGCAACCC...CGCTGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp ACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGGCAACTGAGGAGAGTTaGATACAGGGACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSLNRSTSSSHLARRLKQATEES*IQGPLP
Trigger: TGGAAGAGGTCCCTGTATTCAACTCTCCTCAGTTGC...CTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTTCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVSVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PKFLTGRHVSSGSGLSTEFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...CTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGCGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVERWAPP*SYQGRG
Trigger: CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACG...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGAGACAGAGCTTCAGGTaGAGCAGACTCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRRQSFR*SRLSSK
Trigger: TTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCT...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR GCA 90 bp CACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCAAAGCAGCGTCCTCTaGTCGGCTCTGAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLHSPNLRDKGSLKTQVHQSSVL*SALKAS
Trigger: ACTGGCCTTCAGAGCCGAGCAGAGGACGCTGCTTTG...ATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: HPPHTWPGGSSSHPQIPHKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...GTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527362.5
CDS-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSLNRSTSSSHLARRLKQITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...CTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMSSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCTCTCGGCAGGCACTCTaGGCTCAGCTGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSSRQAL*AQLCTA
Trigger: AGCTGTGCACAGCTGAGCCCAGAGTGCCTGCCGAGA...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRSERWR*YFPCCL
Trigger: CAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR CCA 90 bp CAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: QLEQAVSPRVVSGLLASGRPSER*RWYFPC
Trigger: GCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCT...TCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRRPSER*RWYFPC
Trigger: GCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCT...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR CCA 90 bp CCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGAGCCTGGATCAGTCATaGTCCTGCCAGGAAACAGAT +
Preference number: 4 (lower is better)
Translates to: PNSSQAAMCLRVVGSALRSLDQS*SCQETD
Trigger: ATCTGTTTCCTGGCAGGACCATGACTGATCCAGGCT...CCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
3UTR CAA 72 bp TGCAAAAGGTCCGTCTTTAGCAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTACCAAGGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CKRSVFSREDAT*GTSMQLPRQRA
Trigger: TGCCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGTGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVCQEGL*VYFFCT
Trigger: AGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCA...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp CAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGACTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QLEQAVSPRVVSGLLASGLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...TCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR TCA 90 bp CTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LARRLKQPSPNSSQAAMCLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...ACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp ACGGTGAAGGCAGGGCTTAGGGAACCTGACAAGGGATGCTACAGAATCGCAGGGAGAGGCCTAGTCCAGTaGATTAATCTGCCCAACGGT +
Preference number: 4 (lower is better)
Translates to: TVKAGLREPDKGCYRIAGRGLVQ*INLPNG
Trigger: ACCGTTGGGCAGATTAATTCACTGGACTAGGCCTCT...CCCTGCGATTCTGTAGCATCCCTTGTCAGGTTCCCTAAGCCCTGCCTTCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp GCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGGACAGCTTTCTGTTaGACAACTGGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: AAIPKFLTGRHVSSGSGLRTAFC*TTGSSE
Trigger: TTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCT...GAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGAGGACAGCTTTCTGTTaGACAACTGGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRRTAFC*TTGSSE
Trigger: TTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCT...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGCTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SSSHLARRLKQPSPNSSQLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...CTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTGCTGCCTGGAAGGTCTaGATGGTAGCATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSAAWKV*MVACVR
Trigger: CCTAACACATGCTACCATGCAGACCTTCCAGGCAGC...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCATGGTATTTTCCATGCTaGCTGGAAGGTCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: FNQLEQAVSPRVVSGLLAWYFPC*LEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCA...TGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR GCA 90 bp AGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGTGGGTTGGGGACAGTTaGATGTGGAGTGGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLQGKDESHGLGTVACGVWVGDS*MWSGVV
Trigger: AACCACCCCACTCCACATGCAACTGTCCCCAACCCA...CACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGGAGAACACCTGGGTTTaGAGCTTGGGGTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: GGSSSHPQIPHRPPCVFGENTWV*SLGFIS
Trigger: AGAAATAAACCCCAAGCTGCAAACCCAGGTGTTCTC...CCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527362.5
CDS-3UTR CCA 90 bp GGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GGSSSHPQIPHRPPCVFGSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...CCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVESLALS*CITSTR
Trigger: GCGTGTGCTAGTGATACACCATGACAGGGCCAGGCT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHSSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: NSSQAAMCLRVVGSALRFEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...AAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGAATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTTAGGGGTAACACAAGTTTGGGGCGGTaGCGGGGGTGGATCCACACT +
Preference number: 4 (lower is better)
Translates to: GIFHAAWKVCMVACVRGNTSLGR*RGWIHT
Trigger: AGTGTGGATCCACCCCCGCCACCGCCCCAAACTTGT...GTTACCCCTAACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp ATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCATTTTCCATGCTGCCTaGAAGGTCTGCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: IQPTGTSRVSKGGVGAPGIFHAA*KVCMVA
Trigger: TGCTACCATGCAGACCTTCCAGGCAGCATGGAAAAT...GCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGGGGGACAGTTGCATGTaGAGTGGGGTGGTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEGDSCM*SGVVEY
Trigger: GTACTCAACCACCCCACTCCACATGCAACTGTCCCC...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR CAA 72 bp CACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTaGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HTSLQGKDESHG*GTVACGVGWLS
Trigger: ACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAGAGAATACTAGCATGTaGAACATCTCTTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERENTSM*NISSHL
Trigger: CAGGTGGGAAGAGATGTTTCACATGCTAGTATTCTC...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGPGKWR*GLLKDG
Trigger: GCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGG...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCCCTTCAGGGAAAGGATaGATCGCATGGGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSPSGKG*IAWVGD
Trigger: GTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGG...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGAGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCAAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SPPQPKPQRQREPEDTGSKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...TGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR GCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHRWAPP*SYQGRG
Trigger: CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACG...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGG +
Preference number: 4 (lower is better)
Translates to: EFKRQHHTSLQGKDESHGASPEQ*LRSPAR
Trigger: CCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGC...CCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGCGCTGGTATTTTCCATaGTGCCTGGAAGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWRWYFP*CLEGLH
Trigger: ATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCG...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATCTTGGACCAGTTaGTTAACTGCTTTGCACCTC +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSERSWTS*LTALHL
Trigger: GAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCT...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CACAAACCCTGTCTCTCTCAAGAATCACTGATGTATTTCATCGTAGAGTTGAGAGTCCCGGGCCCTCCATaGAGGTCCCAGACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: HKPCLSQESLMYFIVELRVPGPP*RSQTAA
Trigger: GGCTGCGGTCTGGGACCTGCATGGAGGGCCCGGGAC...TCTCAACTCTACGATGAAATACATCAGTGATTCTTGAGAGAGACAGGGTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAATTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSEFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGTCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp AAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KFLTGRHVSSGSGLSTEVAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...AACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGCCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGATGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGCRENT*KVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCA...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EFKRQHHTSLQGKDESHGHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...CCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: STSSSHLARRLKQPSPNSRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...GGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGGKTQR*APPCSY
Trigger: GTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCATGAGTCCGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SPNLRDKGSLKTQVHHESGKTQR*APPCSY
Trigger: GTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC...GGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGGGGGTGGATCCACACTaGAGAGGGAGAATACTAGCA +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEGVDPH*RGRILA
Trigger: TGCTAGTATTCTCCCTCTCCAGTGTGGATCCACCCC...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR CAA 72 bp CATGGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTaGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: HGLGTVACGVGW*STWSRSWTSCL
Trigger: TAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGCTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 4 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp CATCATGAGTCCCAGGAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCTCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: HHESQECVDNLSEQVHILSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...GAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTCCTGGGACTCATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGACTTCCAAATTGGAGATaGCTGCTCTCGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGLPNWR*LLSAGT
Trigger: AGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAG...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCCTTCCAAATTGGAGATaGCTGCTCTCGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSLPNWR*LLSAGT
Trigger: AGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAG...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAACTTCCAAATTGGAGATaGCTGCTCTCGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: VEMRPSERWRWYFPCCLELPNWR*LLSAGT
Trigger: AGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAG...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCCTGGCAAGTGGAGATaGGGCCTTCTGAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHPGKWR*GLLKDG
Trigger: GCCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGG...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCGTGGAGTGGGGTGGTTaGGTACCTGGTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSVEWGG*VPGLDL
Trigger: AAGATCTAGACCAGGTACTCAACCACCCCACTCCAC...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVECSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGATTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMSRAKL*CRMART
Trigger: GGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGTCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWSSVCH*LQALTR
Trigger: TCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGA...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSASPEQ*LRSPAR
Trigger: CCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGC...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGCTGCCTGGAAGGTCTaGATGGTAGCATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGAAWKV*MVACVR
Trigger: CCTAACACATGCTACCATGCAGACCTTCCAGGCAGC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCTCGGGTTCCAAATTTaGAGATTCAACCAACTGGAA +
Preference number: 4 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWLGFQI*RFNQLE
Trigger: TTCCAGTTGGTTGAATCTGCAAATTTGGAACCCGAG...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGTTTCTGTTGCACAACTaGGTCATCAGAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVFLLHN*VIRIHL
Trigger: GAGATGAATTCTGATGACCCAGTTGTGCAACAGAAA...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACGGTGAAGGCAGGGCTTAGGGAACCTGACAAGGGATGCTACAGAATCGCAGGGAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: TVKAGLREPDKGCYRIAGRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...CCCTGCGATTCTGTAGCATCCCTTGTCAGGTTCCCTAAGCCCTGCCTTCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGGGTGGATCCACACTaGAGAGGGAGAATACTAGCA +
Preference number: 4 (lower is better)
Translates to: VEMRPSERWRWYFPCCLEGVDPH*RGRILA
Trigger: TGCTAGTATTCTCCCTCTCCAGTGTGGATCCACCCC...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR CCA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTAGGCCTTCTGAAAGATaGCGCTGGTATTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSRPSER*RWYFPC
Trigger: GCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCT...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGATGAATCGCATGGGTTaGGGACAGTTGCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEMNRMG*GQLHVE
Trigger: CTCCACATGCAACTGTCCCCAACCCATGCGATTCAT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGACTGCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: ECVDNLSEQVHILLTPGQTAGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGCAGT...CTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp CCTCCTCAACAATTTTCAGAGAGGAAGAAAGGGTCCGGCTCAGAACACCAGCAGGTTGAGCAGCAAATCTaGGCTCAGCTGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PPQQFSERKKGSGSEHQQVEQQI*AQLCTA
Trigger: AGCTGTGCACAGCTGAGCCCAGATTTGCTGCTCAAC...CTGCTGGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp CTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGGCTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LLTPGQEAQAAIPKFLTGLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...GCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp CAAGGCCTCCTCAACAATTTTCAGAGAGGAAGAAAGGGTCCGGCTCAGAACACCGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QGLLNNFQRGRKGPAQNTDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...GGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGATGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGCSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTCTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: PKFLTGRHVSSGSGLSTENCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...CTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERNCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGGCAGAGGGCAGCGTTaGCCACCAGAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQGRGQR*PPEPHP
Trigger: AGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGGCAGAGGGCAGCGTTaGCCACCAGAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPGRGQR*PPEPHP
Trigger: AGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSMPAFT*TAVFCV
Trigger: CACACAGAAGACGGCCGTGCAGGTGAACGCAGGCAT...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGG +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQASPEQ*LRSPAR
Trigger: CCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPASPEQ*LRSPAR
Trigger: CCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTCTCTGGGCTCAGCTGTaGACAGCTTCCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSLWAQL*TASPEQ
Trigger: TTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAG...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGAGACAGAGCTTCAGGTaGAGCAGACTCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVERQSFR*SRLSSK
Trigger: TTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGTATTTTCCATGCTaGCTGGAAGGTCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: QAFRERMNRMGWGQLHVEWYFPC*LEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCA...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGTCGCTGGTATTTTCCATaGTGCCTGGAAGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RWRWYFPCCLEGLHGSMCRWYFP*CLEGLH
Trigger: ATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCG...ACACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR GCA 90 bp TCACCTCCACAGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATGTGTGTTCCCCAAATaGACACAAACCCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SPPQPKPQRQREPEDTGSCVFPK*TQTLSL
Trigger: GAGAGACAGGGTTTGTGTGCATTTGGGGAACACACA...TGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCTGTGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp ACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGTTTCTGTTGCACAACTaGGTCATCAGAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: TSLNRSTSSSHLARRLKQFLLHN*VIRIHL
Trigger: GAGATGAATTCTGATGACCCAGTTGTGCAACAGAAA...CTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTCCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: EFKRQHHTSLQGKDESHGCRENT*KVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCA...CCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCATGAGTCCAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: SPNLRDKGSLKTQVHHESRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...GGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAGGGCGGTGGCGGGGGTaGATCCACACTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGGRWRG*IHTGEG
Trigger: TCCCTCTCCAGTGTGGATCCACCCCCGCCACCGCCC...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCTGGTGTCGGGGCTCCTaGCAAGTGGAGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRWCRGS*QVEMRP
Trigger: AGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCA...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGACCTGGTCTAGATCTTaGACCAGTTGCTTAACTGCT +
Preference number: 4 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWTWSRS*TSCLTA
Trigger: AGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGT...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ATCATTTTCTTTACCACTCCTGCTCGCAAGGCCTCCTCAACAATTTTCAGAGAGAGGCGCGCGGGTGCATaGACAGGAGACAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: IIFFTTPARKASSTIFRERRAGA*TGDNLC
Trigger: ACAGAGGTTGTCTCCTGTCCATGCACCCGCGCGCCT...CTCTCTGAAAATTGTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAATTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSELAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACAGTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSSHLARRLKQPSPNSSQLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...CTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR TCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAACCCCCTACGCTAGGGTaGGAGGGCCAGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEPPTLG*EGQSQV
Trigger: CACCTGGCTCTGGCCCTCTCACCCTAGCGTAGGGGG...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGTGGCTTCAGGATGGTaGTGGAGTTCCATCCCGGCC +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTVASGW*WSSIPA
Trigger: GGCCGGGATGGAACTCCATCACCATCCTGAAGCCAC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp CATCATGAGTCCCAGGAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCTGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HHESQECVDNLSEQVHILCSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...GAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTCCTGGGACTCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNSRAKL*CRMART
Trigger: GGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVSRAKL*CRMART
Trigger: GGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQSVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPRWAPP*SYQGRG
Trigger: CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAAGACAGAGCTTCAGGTaGAGCAGACTCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGRQSFR*SRLSSK
Trigger: TTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCT...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGATGGTATTTTCCATGCTaGCTGGAAGGTCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGWYFPC*LEGLHG
Trigger: ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCA...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CAAGGCCTCCTCAACAATTTTCAGAGAGGAAGAAAGGGTCCGGCTCAGAACACCGAACAACACACGGTGTaGATCTGTGTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: QGLLNNFQRGRKGPAQNTEQHTV*ICVFPK
Trigger: TTTGGGGAACACACAGATGCACACCGTGTGTTGTTC...GGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGAAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAGGCGCGCGGGTGCATaGACAGGAGACAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTRRAGA*TGDNLC
Trigger: ACAGAGGTTGTCTCCTGTCCATGCACCCGCGCGCCT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAATGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VEMRPSERWRWYFPCCLECQEGL*VYFFCT
Trigger: AGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCA...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCGAGAATACTAGCATGTaGAACATCTCTTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSENTSM*NISSHL
Trigger: CAGGTGGGAAGAGATGTTTCACATGCTAGTATTCTC...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGAGAATACTAGCATGTaGAACATCTCTTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: VEMRPSERWRWYFPCCLEENTSM*NISSHL
Trigger: CAGGTGGGAAGAGATGTTTCACATGCTAGTATTCTC...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR TCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCCCTTCAGGGAAAGGATaGATCGCATGGGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRPSGKG*IAWVGD
Trigger: GTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGG...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAGGACAGCTTTCTGTTaGACAACTGGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMRTAFC*TTGSSE
Trigger: TTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWNCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGGGCAAAGCTCTGCTaGCGGATGGCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCRAKLC*RMARTL
Trigger: CAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GAAAAACACCTTCTTATGACCTCGTTGTCACTGATGATACTAAATCCATTGTGCAGCAGGGCAAAGCTCTaGTGCCGGATGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EKHLLMTSLSLMILNPLCSRAKL*CRMART
Trigger: GGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCT...GCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGGGCAGAGGGCAGCGTTaGCCACCAGAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERGRGQR*PPEPHP
Trigger: AGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCC...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGATCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGSSVCH*LQALTR
Trigger: TCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGA...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGACCAGTTGCTTAACTaGTTTGCACCTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGDQLLN*FAPQFP
Trigger: AGGAAACTGAGGTGCAAAGCAGTTAAGCAACTGGTC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATAGGCAGGCGCGCGGGTaGATGGACAGGAGACAACCT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNRQARG*MDRRQP
Trigger: AGGTTGTCTCCTGTCCATGCACCCGCGCGCCTGCCT...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGGCCCCAGAGAATTCTaGCACCTCTGCTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTGPREF*HLCCGF
Trigger: GAAGCCACAGCAGAGGTGGCAGAATTCTCTGGGGCC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAATCTGGGCTCAGCTGTaGACAGCTTCCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQIWAQL*TASPEQ
Trigger: TTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTCAAATTGGAGATGACTaGTCTCGGCAGGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGQIGDD*SRQALF
Trigger: AAAAAGTGCCTGCCGAGAGCAGTCATCTCCAATTTG...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTTTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGGGCGGCCAACAGCCTaGCCCTGTCATGGTGTATCA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCGRPTA*PCHGVS
Trigger: TGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp CGAGCTGAGCAGCTTCATCATAACGCTCAACTTTTTATCCAGTCTTATTACTTCAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RAEQLHHNAQLFIQSYYFSSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...GAAGTAATAAGACTGGATAAAAAGTTGAGCGTTATGATGAAGCTGCTCAGCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPCRENT*KVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCATCCTCCTCACACCTaGCCAGGAGGCTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVHPPHT*PGGSSS
Trigger: GCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQGKTQR*APPCSY
Trigger: GTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGGGAAGACGCAACGTTaGGCACCTCCATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPGKTQR*APPCSY
Trigger: GTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TATTTAGACAATGAATCAGATGGACTCCAACAAAGCAGATACAGTCAGCCCTCTTGGTGTCGGGGCTCCTaGCAAGTGGAGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YLDNESDGLQQSRYSQPSWCRGS*QVEMRP
Trigger: AGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCA...AGAGGGCTGACTGTATCTGCTTTGTTGGAGTCCATCTGATTCATTGTCTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTCTCAGTTTCCTCATCTaGAACAAGCCGTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACLSFLI*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGATGAGGAAACTGAG...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAACCTGGTCTAGATCTTaGACCAGTTGCTTAACTGCT +
Preference number: 4 (lower is better)
Translates to: TSLQGKDESHGLGTVACGTWSRS*TSCLTA
Trigger: AGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGT...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGGGACAGTTGCATGTaGAGTGGGGTGGTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMGDSCM*SGVVEY
Trigger: GTACTCAACCACCCCACTCCACATGCAACTGTCCCC...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
3UTR CAA 72 bp TCCAGAGCCAAGTCTGTGAACAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAATCAAGAAATGACACC +
Preference number: 4 (lower is better)
Translates to: SRAKSVNSPIAV*ASLSEKSRNDT
Trigger: GGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGCTATGGGACTGTTCACAGACTTGGCTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTGGAGATGAGGCCTTCTaGAAGATGGCGCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSGDEAF*KMALVF
Trigger: AAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCC...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCACACAGCCACTTGGATaGGGCCCCAGAGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTTQPLG*GPREFC
Trigger: GCAGAATTCTCTGGGGCCTCATCCAAGTGGCTGTGT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCGTTGGGCACCTCCATaGAGTTACCAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCRWAPP*SYQGRG
Trigger: CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGSFNKT*KRSVFS
Trigger: GCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCT...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp CCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCATGAGTCCCAGAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: PNLRDKGSLKTQVHHESQSFNKT*KRSVFS
Trigger: GCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCT...CTGGGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVMPAFT*TAVFCV
Trigger: CACACAGAAGACGGCCGTGCAGGTGAACGCAGGCAT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTATGCCTGCGTTCACCTaGACGGCCGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCMPAFT*TAVFCV
Trigger: CACACAGAAGACGGCCGTGCAGGTGAACGCAGGCAT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGACATCTCTTCCCACCTaGGAGGAGACAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMTSLPT*EETELQ
Trigger: CTGAAGCTCTGTCTCCTCGCAGGTGGGAAGAGATGT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCACATCTCTTCCCACCTaGGAGGAGACAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRTSLPT*EETELQ
Trigger: CTGAAGCTCTGTCTCCTCGCAGGTGGGAAGAGATGT...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTCGCTGGTATTTTCCATaGTGCCTGGAAGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSRWYFP*CLEGLH
Trigger: ATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCG...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TTCCAAATTTGCAGATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FQICRFNQLEQAVSPRVVSERWR*YFPCCL
Trigger: CAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA...CACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTGCAAATTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACTGCCACCTCTGCTGTaGCTTCAGGATGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTLPPLL*LQDGDG
Trigger: TCCATCACCATCCTGAAGCCACAGCAGAGGTGGCAG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGTTGAGCAGCAAATCTaGGCTCAGCTGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPVEQQI*AQLCTA
Trigger: AGCTGTGCACAGCTGAGCCCAGATTTGCTGCTCAAC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGTTGAGCAGCAAATCTaGGCTCAGCTGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQVEQQI*AQLCTA
Trigger: AGCTGTGCACAGCTGAGCCCAGATTTGCTGCTCAAC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TTCCAAATTTGCAGATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGGCAGATTCAACCAACTaGAACAAGCCGTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FQICRFNQLEQAVSPRVVADSTN*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTGC...CACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTGCAAATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR TCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGAGATGAGGCCTTCTaGAAGATGGCGCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMGDEAF*KMALVF
Trigger: AAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCC...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACATCTGCCCAACGGTATaGAGGTTAGAAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNICPTV*RLEGRR
Trigger: GCGCCTGCCTTCTAACCTTCATACCGTTGGGCAGAT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQCSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATTTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATCAAATTGGAGATGACTaGTCTCGGCAGGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHQIGDD*SRQALW
Trigger: CCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTG...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGAATTCTGCCACCTCTaGTGTGGCTTCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTEFCHL*CGFRMV
Trigger: CACCATCCTGAAGCCACAGCAGAGGTGGCAGAATTC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTATCTGGGCTCAGCTGTaGACAGCTTCCCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCIWAQL*TASPEQ
Trigger: TTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCCTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SERWRWYFPCCLEGLHGSLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...GCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTCAGAACACCAGCAGCTCTTGTCAGGATTCCTCCATCCTGGCTGTTTAGTAAATTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LRTPAALVRIPPSWLFSKFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...TTTACTAAACAGCCAGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNSLALS*CITSTR
Trigger: GCGTGTGCTAGTGATACACCATGACAGGGCCAGGCT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSLALS*CITSTR
Trigger: GCGTGTGCTAGTGATACACCATGACAGGGCCAGGCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAGCCTGGCCCTGTCATaGTGTATCACTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVSLALS*CITSTR
Trigger: GCGTGTGCTAGTGATACACCATGACAGGGCCAGGCT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAAAGCTCTGCTGCCGGATaGCCAGGACCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNESSAAG*PGPWRT
Trigger: TGTCCTCCAAGGTCCTGGCCATCCGGCAGCAGAGCT...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACATGATGGCAATGCACTaGCACAGAGCCGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNMMAMH*HRAEEL
Trigger: CAGCTCCTCGGCTCTGTGCCAGTGCATTGCCATCAT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATCTGTCTCCCAGGGCATaGATCTCAGGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNLSPRA*ISGSSL
Trigger: CAGTGAGGACCCTGAGATCCATGCCCTGGGAGACAG...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCCGTGTCTCCAAGGGTaGTGTCGGGGCTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNPCLQG*CRGSFI
Trigger: GATAAAAGAGCCCCGACACCACCCTTGGAGACACGG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp CACAAACCCTGTCTCTCTCAAGAATCACTGATGTATTTCATCGTAGAGTTGAGAAGCCATTACCACTGCTaGGCTCGGTTGGTGTACAGC +
Preference number: 4 (lower is better)
Translates to: HKPCLSQESLMYFIVELRSHYHC*ARLVYS
Trigger: GCTGTACACCAACCGAGCCCAGCAGTGGTAATGGCT...TCTCAACTCTACGATGAAATACATCAGTGATTCTTGAGAGAGACAGGGTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGATCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGSSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGACACAGGTTCATCATaGGTCCCAGGAGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTDTGSS*VPGVCR
Trigger: TCTACACACTCCTGGGACTCATGATGAACCTGTGTC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGGTGGAGTGGGGTGGTTaGGTACCTGGTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERVEWGG*VPGLDL
Trigger: AAGATCTAGACCAGGTACTCAACCACCCCACTCCAC...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAGAGGCCTAGTCCAGTaGATTAATCTGCCCAACGGT +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTRGLVQ*INLPNG
Trigger: ACCGTTGGGCAGATTAATTCACTGGACTAGGCCTCT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCTATCAGCATCCATTGTaGACCGGAATCCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRYQHPL*TGIPDS
Trigger: CGAATCAGGGATTCCGGTTCACAATGGATGCTGATA...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494714.5
CDS-3UTR TCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTATCAGCATCCATTGTaGACCGGAATCCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPYQHPL*TGIPDS
Trigger: CGAATCAGGGATTCCGGTTCACAATGGATGCTGATA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATCAGTCTGGGCGAGATaGAGCAGCAGGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNESVWAR*SSRAKL
Trigger: GAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTACAGAGCCGAGGAGCTaGTTACCTTGGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCTEPRS*LPWDLS
Trigger: AGACAGATCCCAAGGTAAGCAGCTCCTCGGCTCTGT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAAGACAGGCACCTTCTaGTCACCTCCACAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVKTGTF*SPPQPK
Trigger: TTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp CTCAGAACACCAGCAGCTCTTGTCAGGATTCCTCCATCCTGGCTGTTTAGTAAATCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: LRTPAALVRIPPSWLFSKSSVCH*LQALTR
Trigger: TCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGA...TTTACTAAACAGCCAGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGATGGGTTGGGGACAGTTaGATGTGGAGTGGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGWVGDS*MWSGVV
Trigger: AACCACCCCACTCCACATGCAACTGTCCCCAACCCA...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTGTGTGTTCCCCAAATaGACACAAACCCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPCVFPK*TQTLSL
Trigger: GAGAGACAGGGTTTGTGTGCATTTGGGGAACACACA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATGTGTGTTCCCCAAATaGACACAAACCCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQCVFPK*TQTLSL
Trigger: GAGAGACAGGGTTTGTGTGCATTTGGGGAACACACA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTTCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAGGATCTGGTCAGGCTTaGAAAGGGTCTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGGSGQA*KGSPGG
Trigger: ACCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCC...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACAATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TTGTATTTAGACAATGAATCAGATGGACTCCAACAAAGCAGATACAGTCAGCCCGGGGTGGATCCACACTaGAGAGGGAGAATACTAGCA +
Preference number: 4 (lower is better)
Translates to: LYLDNESDGLQQSRYSQPGVDPH*RGRILA
Trigger: TGCTAGTATTCTCCCTCTCCAGTGTGGATCCACCCC...GGGCTGACTGTATCTGCTTTGTTGGAGTCCATCTGATTCATTGTCTAAATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGTCTGAAAGATGGCGCTaGTATTTTCCATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMSERWR*YFPCCL
Trigger: CAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGA...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGCTCAGTTTCCTCATCTaGAACAAGCCGTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMLSFLI*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGATGAGGAAACTGAG...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp CTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGTGCACTGTCTCCCAGGGCATaGATCTCAGGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LFIQSYYFFPSFMITIRALSPRA*ISGSSL
Trigger: CAGTGAGGACCCTGAGATCCATGCCCTGGGAGACAG...TGCACGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGACTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATCTTCAGAACGCCTGTaGGTGCAGGGAGAACACCTG +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNESSERL*VQGEHL
Trigger: CAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGAGACAAAGGGAGCCTaGAGACACAGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCETKGA*RHRFIM
Trigger: CATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCCTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCTGCATAAAAGAGAATaGCTTGAGAGCCCACTCACA +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPLHKRE*LESPLT
Trigger: TGTGAGTGGGCTCTCAAGTCATTCTCTTTTATGCAG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483239.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCCSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGGTTTTCCTCGTTCCTaGTGCACACTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNGFPRS*CTLLAR
Trigger: TCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAAACC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCAGTGTTGGCCTCCTTATCCGAGAAATCAAGAAATGACACCAGCGCTTCCAATCTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: AVLASLSEKSRNDTSASNLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...ATTGGAAGCGCTGGTGTCATTTCTTGATTTCTCGGATAAGGAGGCCAACACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAAGCCTGGGCTCGGTTaGTGTACAGCACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVKPGLG*CTALSC
Trigger: ACATGAAAGTGCTGTACACCAACCGAGCCCAGGCTT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGATCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATTCTCCAGGAGGTTCTTaGTGGTCACGGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNSPGGS*WSRLCS
Trigger: AGAACACAGCCGTGACCACCAAGAACCTCCTGGAGA...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTATCACTAGCACACGCTaGTTTTCCTCGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVITSTR*FSSFLL
Trigger: CAGCAGGAACGAGGAAAACCAGCGTGTGCTAGTGAT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNLVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAACACCTGGAAGGTTaGCCTGGAACCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNEHLEG*PGTRLG
Trigger: TCCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGCAGGGAGAACACCTaGAAGGTTGGCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNECRENT*KVGLEP
Trigger: TGGTTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQRIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATCTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCLTIHQ*LLIVLK
Trigger: CTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAAGTTCCTGCTGCACACTaGTTGCCAGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEVPAAH*LPELEN
Trigger: GTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGGAAC...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATTTCCTCGTTCCTGCTaGACACTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEFPRSC*TLLARA
Trigger: AGCTCTGGCAAGCAGTGTGCAGCAGGAACGAGGAAA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATTTTCTTTACCACTCCTaGTCGCAAGGCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNFLYHS*SQGLLN
Trigger: GTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAA...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQSFNKT*KRSVFS
Trigger: GCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQSSVCH*LQALTR
Trigger: TCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGAACAACACACGGTGTaGATCTGTGTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVEQHTV*ICVFPK
Trigger: TTTGGGGAACACACAGATGCACACCGTGTGTTGTTC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGAACAACACACGGTGTaGATCTGTGTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCEQHTV*ICVFPK
Trigger: TTTGGGGAACACACAGATGCACACCGTGTGTTGTTC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCTCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAACCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp AAACACCTTCTTATGACCTCGTTGTCACTGATGATACTAAATCCATTGTGCATTCTGGTCAGGTCAAGGTaGTTGATGATCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: KHLLMTSLSLMILNPLCILVRSR*LMIRLR
Trigger: ACGGAGCCTGATCATCAACCACCTTGACCTGACCAG...AATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATTTTCCATGCTGCCTaGAAGGTCTGCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERIFHAA*KVCMVA
Trigger: TGCTACCATGCAGACCTTCCAGGCAGCATGGAAAAT...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTTGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVCQEGL*VYFFCT
Trigger: AGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCA...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp TCAACTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGCTGCTTGCCAGAGCTTaGGAACAGACACACAGACCA +
Preference number: 4 (lower is better)
Translates to: STFYPVLLLLPELHDNYSLLARA*EQTHRP
Trigger: TGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAG...CGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR TCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCTTTATAGCATAACGTaGTGCAGTCTCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVLYSIT*CSLTSC
Trigger: ACAGGAGGTGAGACTGCATCACGTTATGCTATAAAG...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGGGTTGCGGCTTAACTaGATAATCGCTAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNGLRLN*IIARVS
Trigger: AGAAACCCTAGCGATTATTCAGTTAAGCCGCAACCC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAGGACAGCTTTCTGTTaGACAACTGGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNRTAFC*TTGSSE
Trigger: TTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGGACAGCTTTCTGTTaGACAACTGGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCRTAFC*TTGSSE
Trigger: TTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGTTCAAGGTGGTCCTaGATTCATCCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNECSRWS*IHPPPG
Trigger: ACCAGGAGGAGGATGAATGCAGGACCACCTTGAACA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQNCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAATTTCTGTTGCACAACTaGGTCATCAGAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQFLLHN*VIRIHL
Trigger: GAGATGAATTCTGATGACCCAGTTGTGCAACAGAAA...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TCAACTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGCCAGGAGGTTCTTGGTaGTCACGGCTGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: STFYPVLLLLPELHDNYSPGGSW*SRLCSF
Trigger: GAAAGAACACAGCCGTGACCACCAAGAACCTCCTGG...CGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAAGCCTGGAACCAGACTTaGAATCTTTCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEAWNQT*NLSSRA
Trigger: GGCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGC...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp CTTTTTATCCAGTCTTATTACTTCTTCCCGAGCTTCATGATAACTATTCGTGCACCTGGAAGGTTGGCCTaGAACCAGACTTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LFIQSYYFFPSFMITIRAPGRLA*NQTWNL
Trigger: AAGATTCCAAGTCTGGTTCCAGGCCAACCTTCCAGG...TGCACGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp AAACACCTTCTTATGACCTCGTTGTCACTGATGATACTAAATCCATTGTGCATTAGGAGCTGCTTACCTTaGGATCTGTCTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: KHLLMTSLSLMILNPLCIRSCLP*DLSSER
Trigger: GCGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCT...AATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAAGACTCTGATTACCTaGAACAAGCCGTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNKTLIT*NKPCLQ
Trigger: TTGGAGACACGGCTTGTTCCAGGTAATCAGAGTCTT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR TCA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCATGTCCTTCAACCAATaGATGGCTAAACACACCATA +
Preference number: 4 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTMSFNQ*MAKHTI
Trigger: TATGGTGTGTTTAGCCATTCATTGGTTGAAGGACAT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVSFNKT*KRSVFS
Trigger: GCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTCTTCTGTGTGTCACTaGCTGCAAGCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSSVCH*LQALTR
Trigger: TCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR GCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAGACCAGTTGCTTAACTaGTTTGCACCTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGDQLLN*FAPQFP
Trigger: AGGAAACTGAGGTGCAAAGCAGTTAAGCAACTGGTC...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR GCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATAAATCCCAGCTCCTCTaGTTGTTGAACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNKSQLL*LLNQKT
Trigger: AGTCTTCTGGTTCAACAAGCAGAGGAGCTGGGATTT...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGATCTTCAGGGCCAGGTTaGCTTTTCCCATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGSSGPG*LFPCEN
Trigger: ATTTTCACATGGGAAAAGCCAACCTGGCCCTGAAGA...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATACATCCTCTTTAGGATaGAAAATCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNTSSLG*KIPAPL
Trigger: CAGAGGAGCTGGGATTTTCCATCCTAAAGAGGATGT...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNECQEGL*VYFFCT
Trigger: AGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp AAACACCTTCTTATGACCTCGTTGTCACTGATGATACTAAATCCATTGTGCATTTGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: KHLLMTSLSLMILNPLCICQEGL*VYFFCT
Trigger: AGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCA...AATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR GCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACAACTGCATCATTTCCTaGTGTGGAAAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNNCIIS*CGKTPS
Trigger: AGAAGGTGTTTTTCCACAGCAGGAAATGATGCAGTT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR GCA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAGCTTTAACAAGACCTaGAAAAGGTCCGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGSFNKT*KRSVFS
Trigger: GCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCT...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGTTTCTGTTGCACAACTaGGTCATCAGAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERFLLHN*VIRIHL
Trigger: GAGATGAATTCTGATGACCCAGTTGTGCAACAGAAA...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACTTTCTGTTGCACAACTaGGTCATCAGAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNFLLHN*VIRIHL
Trigger: GAGATGAATTCTGATGACCCAGTTGTGCAACAGAAA...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCTTCATAGCAGTTTGTaGAGGACTGATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVLHSSL*RTDHSL
Trigger: AAGACTATGATCAGTCCTCCACAAACTGCTATGAAG...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATTTCCCTTCTTCTCTTaGCTCGTTCCTTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEFPFFS*LVPLHP
Trigger: AGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAA...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CCA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAAAGGATTCCTCCATCCTaGCTGTTTAGTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNERIPPS*LFSKDR
Trigger: CCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR TCA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CCA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCATAGTGCTGTATTATaGAATAGGACTCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNHSAVL*NRTQQL
Trigger: TAGTTGCTGAGTCCTATTCCATAATACAGCACTATG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR TCA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATTTGGCTTTTCCCATGTaGAAATATGCTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNLAFPM*KYAFVH
Trigger: ATGCACAAAAGCATATTTTCACATGGGAAAAGCCAA...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393020.5
3UTR CAA 72 bp CTTATGACCTCGTTGTCACTGATGATACTAAATCCATaGTGCATTCTGAATAAAGTTTGTTCTGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LMTSLSLMILNP*CILNKVCSVHS
Trigger: TGAGTGCACAGAACAAACTTTATTCAGAATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp GGACCTGTGCCCGAGCCCCGCGCGGAGCCTGCCCCAGACGCGCGCTaGCCGCCGGGCGCAAAGAGGCCAGGCCGCACGCACTGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: GPVPEPRAEPAPDAR*PPGAKRPGRTHCCP
Trigger: TGGGCAACAGTGCGTGCGGCCTGGCCTCTTTGCGCCCGGCGGGCAGCGCGCGTCTGGGGCAGGCTCCGCGCGGGGCTCGGGCACAGGTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp GCGCGCTGCCCGCCGGGCGCAAAGAGGCCAGGCCGCACGCACTGTTaGCCAGCAACCGCTCCCAGGCGTCCGCAAGTCCCGGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ARCPPGAKRPGRTHC*PATAPRRPQVPGPP
Trigger: TGGAGGGCCCGGGACTTGCGGACGCCTGGGAGCGGTTGCTGGGCAACAGTGCGTGCGGCCTGGCCTCTTTGCGCCCGGCGGGCAGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp TGCCCAGCAACCGCTCCCAGGCGTCCGCAAGTCCCGGGCCCTCCATaGAGGTCCCAGACCGCAGCCGTCCCAGACCGCAGCCAAGACCTT +
Preference number: 5 (lower is better)
Translates to: CPATAPRRPQVPGPP*RSQTAAVPDRSQDL
Trigger: AAGGTCTTGGCTGCGGTCTGGGACGGCTGCGGTCTGGGACCTGCATGGAGGGCCCGGGACTTGCGGACGCCTGGGAGCGGTTGCTGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp GGTCCCAGACCGCAGCCGTCCCAGACCGCAGCCAAGACCTTCCCATaGTCTGGGGCCCAAAGCAGCGTCCTCTGCTCGGCTCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GPRPQPSQTAAKTFP*SGAQSSVLCSALKA
Trigger: GGCCTTCAGAGCCGAGCAGAGGACGCTGCTTTGGGCCCCAGAGCATGGGAAGGTCTTGGCTGCGGTCTGGGACGGCTGCGGTCTGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS CCA 90 bp CAGACCGCAGCCGTCCCAGACCGCAGCCAAGACCTTCCCATGCTCTaGGGCCCAAAGCAGCGTCCTCTGCTCGGCTCTGAAGGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QTAAVPDRSQDLPML*GPKQRPLLGSEGQC
Trigger: GCACTGGCCTTCAGAGCCGAGCAGAGGACGCTGCTTTGGGCCCCAGAGCATGGGAAGGTCTTGGCTGCGGTCTGGGACGGCTGCGGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp CGGCAGGCACTCTGGGCTCAGCTGTGCACAGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGGCCGTCTTCTGTGTGTCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: RQALWAQLCTASPEQ*LRSPARPSSVCHCL
Trigger: CAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGAGTGCCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: NSSQAAMCLRVVGSALRFRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...AAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERRQRAA*PTRTSS
Trigger: GGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCT...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 90 bp CCCCCAGGTGGAGGCAATGTGCCAGCAACCTACACCTGCAGGGTATaGAACAGGATCCAGGAGAAAGGCTTGCCGCTTCCATGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PPGGGNVPATYTCRV*NRIQEKGLPLPWWS
Trigger: GCTCCACCATGGAAGCGGCAAGCCTTTCTCCTGGATCCTGTTGCATACCCTGCAGGTGTAGGTTGCTGGCACATTGCCTCCACCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480233.1
CDS-3UTR CAA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSEGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 90 bp ATTTGTTTAGGCTGGGCTCAGCTGTGCACAGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGGCCGTCTTCTGTGTGTCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: ICLGWAQLCTASPEQ*LRSPARPSSVCHCL
Trigger: CAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGCCTAAACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496311.1
CDS-3UTR CAA 90 bp CTCATCTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: LIWNKPCLQGWCRGSWQVTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...CACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSERTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMREELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS TCA 90 bp GGTGGCGGGGGTGGATCCACACTGGAGAGGGAGAATACTAGCATGTaGAACATCTCTTCCCACCTGCGAGGAGACAGAGCTTCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GGGGGSTLERENTSM*NISSHLRGDRASGA
Trigger: TGCACCTGAAGCTCTGTCTCCTCGCAGGTGGGAAGAGATGTTTCACATGCTAGTATTCTCCCTCTCCAGTGTGGATCCACCCCCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS TCA 90 bp AGCCTATTCTTAACCTCTCACTGCGCCAGGGTGAGAGGTCTTATCTaGCAGCCCCCAGGTGGAGGCAATGTGCCAGCAACCTACACCTGC +
Preference number: 5 (lower is better)
Translates to: SLFLTSHCARVRGLI*QPPGGGNVPATYTC
Trigger: GCAGGTGTAGGTTGCTGGCACATTGCCTCCACCTGGGGGCTGTCAGATAAGACCTCTCACCCTGGCGCAGTGAGAGGTTAAGAATAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480233.1
CDS CCA 90 bp ACAGCCACTTGGATGAGGCCCCAGAGAATTCTGCCACCTCTGCTGTaGCTTCAGGATGGTGATGGAGTTCCATCCCGGCCACATCCTCTT +
Preference number: 5 (lower is better)
Translates to: TATWMRPQRILPPLL*LQDGDGVPSRPHPL
Trigger: AAGAGGATGTGGCCGGGATGGAACTCCATCACCATCCTGAAGCCACAGCAGAGGTGGCAGAATTCTCTGGGGCCTCATCCAAGTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGATGGCAATGGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: AMCLRVVGSALRFPMMAMVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...CATTGCCATCATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ECVDNLSEQVHILLTPGQGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...CTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QHHTSLQGKDESHGLGTVGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...AACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TCCCCAAATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: SPNSSQAAMCLRVVGSALTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...CAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LTGRHVSSGSGLSTEVSHGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...ATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TTAGCAGGGAAGACGCAACGTTGGGCACCTCCATGCAGTTACCAAGGCAGAGGGAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: LAGKTQRWAPPCSYQGRGRTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...CCCTCTGCCTTGGTAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp ACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: TSLNRSTSSSHLARRLKQEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...CTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CAA 90 bp CTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTCCCATGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: LTGRHVSSGSGLSTEVSHEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...ATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CAA 90 bp AGCCCAAACCTCAGAGACAAAGGGAGCCTGAAGACACAGGTTCATCATGAGTCCAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: SPNLRDKGSLKTQVHHESRQRAA*PTRTSS
Trigger: GGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCT...GGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCTCTGAGGTTTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMRQRAA*PTRTSS
Trigger: GGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: NKPCLQGWCRGSWQVEMRRLSSK*EMTALG
Trigger: GCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCT...CCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS-3UTR CAA 90 bp CTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGTGGAGTGGGGTGGTaGAGTACCTGGTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: LQGWCRGSWQVEMRPSERCGVGW*STWSRS
Trigger: AGATCTAGACCAGGTACTCAACCACCCCACTCCACA...TCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TGTCTCCAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAGATGAATCGCATGGGTaGGGGACAGTTGCATGTGGA +
Preference number: 5 (lower is better)
Translates to: CLQGWCRGSWQVEMRPSEDESHG*GTVACG
Trigger: TCCACATGCAACTGTCCCCAACCCATGCGATTCATC...TTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTCCTCACTGCTGGGCTCGGTaGGTGTACAGCACTTTCATG +
Preference number: 5 (lower is better)
Translates to: RPTAWPCHGVSLAHAGFPHCWAR*VYSTFM
Trigger: CATGAAAGTGCTGTACACCAACCGAGCCCAGCAGTG...AGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 90 bp ATTAATCTGCCCAACGGTATGAAGGTTAGAAGGCAGGCGCGCGGGTaGATGGACAGGAGACAACCTCTGTCTCCCAGGGCATGGATCTCA +
Preference number: 5 (lower is better)
Translates to: INLPNGMKVRRQARG*MDRRQPLSPRAWIS
Trigger: TGAGATCCATGCCCTGGGAGACAGAGGTTGTCTCCTGTCCATGCACCCGCGCGCCTGCCTTCTAACCTTCATACCGTTGGGCAGATTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393020.5
ENST00000455306.5
ENST00000464224.5
CDS TCA 90 bp GAGGCCCCAGAGAATTCTGCCACCTCTGCTGTGGCTTCAGGATGGTaGTGGAGTTCCATCCCGGCCACATCCTCTTTAGGATGGAAAATC +
Preference number: 5 (lower is better)
Translates to: EAPENSATSAVASGW*WSSIPATSSLGWKI
Trigger: GATTTTCCATCCTAAAGAGGATGTGGCCGGGATGGAACTCCATCACCATCCTGAAGCCACAGCAGAGGTGGCAGAATTCTCTGGGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGCCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: SLQGKDESHGLGTVACGVPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...CACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: TSLQGKDESHGLGTVACGVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...TCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: VACGVGWLSTWSRSWTSCREDAT*GTSMQL
Trigger: TAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCT...GCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGTGTGGAGTGGGGTGGTaGAGTACCTGGTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: AFRERMNRMGWGQLHVEWCGVGW*STWSRS
Trigger: AGATCTAGACCAGGTACTCAACCACCCCACTCCACA...CCACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGATGGGTTGGGGACAGTaGCATGTGGAGTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMMGWGQ*HVEWGG
Trigger: ACCACCCCACTCCACATGCAACTGTCCCCAACCCAT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAATGGGTTGGGGACAGTaGCATGTGGAGTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: VEMRPSERWRWYFPCCLEMGWGQ*HVEWGG
Trigger: ACCACCCCACTCCACATGCAACTGTCCCCAACCCAT...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GGGTTGGGGACAGTTGCATGTGGAGTGGGGTGGTTGAGTACCTGGTCTAGATCTGATGAATCGCATGGGTaGGGGACAGTTGCATGTGGA +
Preference number: 5 (lower is better)
Translates to: GLGTVACGVGWLSTWSRSDESHG*GTVACG
Trigger: TCCACATGCAACTGTCCCCAACCCATGCGATTCATC...AGATCTAGACCAGGTACTCAACCACCCCACTCCACATGCAACTGTCCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 90 bp CATGTGAAACATCTCTTCCCACCTGCGAGGAGACAGAGCTTCAGGTaGAGCAGACTCTCTTCCAAATTGGAGATGACTGCTCTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: HVKHLFPPARRQSFR*SRLSSKLEMTALGR
Trigger: CCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCTCCTCGCAGGTGGGAAGAGATGTTTCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS CCA 90 bp TATTCCCTGAGAAAGCCCCATGGATACATCCCTGCCTCACTGACCTaGGCTCGGTTGGTGTACAGCACTTTCATGTCCTTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YSLRKPHGYIPASLT*ARLVYSTFMSFSFS
Trigger: GGAGAAGCTGAAGGACATGAAAGTGCTGTACACCAACCGAGCCCAGGTCAGTGAGGCAGGGATGTATCCATGGGGCTTTCTCAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527781.1
CDS-3UTR CAA 90 bp AATTCCTCACAGGCCGCCATGTGTCTTCGGGTAGTGGGCTCAGCACTGAGGTTTTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: NSSQAAMCLRVVGSALRFSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...AAACCTCAGTGCTGAGCCCACTACCCGAAGACACATGGCGGCCTGTGAGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CAAGGGTGGTGTCGGGGCTCCTGGCAAGTGGAGATGAGGCCTTCTGAAAGATGGCATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: QGWCRGSWQVEMRPSERWHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...CCATCTTTCAGAAGGCCTCATCTCCACTTGCCAGGAGCCCCGACACCACCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACCATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: HPPHTWPGGSSSHPQIPHHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...GTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CAA 90 bp AGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: SLQGKDESHGLGTVACGVTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...CACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCCGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGGCTAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: VDNLSEQVHILLTPGQEASPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...AGCCTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMRTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGTGGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: SLQGKDESHGLGTVACGVEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...CACTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: VEMRPSERWRWYFPCCLEREDAT*GTSMQL
Trigger: TAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCT...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTCCTATGAAGCTTTCTCAGTaGAGCAGCAAATCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RPTAWPCHGVSLAHAGFPMKLSQ*SSKSGL
Trigger: GAGCCCAGATTTGCTGCTCAACTGAGAAAGCTTCAT...AGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CAGATTCAACCAACTGGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCCTCCTCGGGTTCCAAATTaGCAGATTCAACCAACTGGA +
Preference number: 5 (lower is better)
Translates to: QIQPTGTSRVSKGGVGAPPRVPN*QIQPTG
Trigger: TCCAGTTGGTTGAATCTGCAAATTTGGAACCCGAGG...AGGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGTTGGTTGAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS GCA 90 bp CCAACTGCTGTTTTAGGCCAAGAGGCACTCATTTACGTGCGGCAATaGTTCCAGAAAGCTTCCAGCCCTCCTTCCAGTGCAGAAAACGCT +
Preference number: 5 (lower is better)
Translates to: PTAVLGQEALIYVRQ*FQKASSPPSSAENA
Trigger: AGCGTTTTCTGCACTGGAAGGAGGGCTGGAAGCTTTCTGGAAGCATTGCCGCACGTAAATGAGTGCCTCTTGGCCTAAAACAGCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429951.5
CDS CCA 90 bp AACTATCCCCTACCTGGATCAGTCATGGTCCTGCCAGGAAACAGATaGCACACTTGCACTGGGCAACTGAGGAGAGTTGAATACAGGGAC +
Preference number: 5 (lower is better)
Translates to: NYPLPGSVMVLPGNR*HTCTGQLRRVEYRD
Trigger: GTCCCTGTATTCAACTCTCCTCAGTTGCCCAGTGCAAGTGTGCCATCTGTTTCCTGGCAGGACCATGACTGATCCAGGTAGGGGATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525989.1
CDS-3UTR CAA 90 bp TGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGCAGGACAGCTTTCTGTaGCACAACTGGGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: CVDNLSEQVHILLTPGQEQDSFL*HNWVIR
Trigger: TCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTG...CTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GGGCGGCCAACAGCCTGGCCCTGTCATGGTGTATCACTAGCACACGCTGGTTTTACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: GRPTAWPCHGVSLAHAGFTLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...AAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp ACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCACATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: TSSSHLARRLKQPSPNSSHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...TGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000527362.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCGGATGGCCAGGACCTaGGAGGACAAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCRMART*EDKRAA
Trigger: GGCCGCCCTCTTGTCCTCCAAGGTCCTGGCCATCCG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPRQRAA*PTRTSS
Trigger: GGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AATTTCATCATTTTCTTTACCACTCCTGCTCGCAAGGCCTCCTCAACAATTTTCAGGCCGCACGCACTGTaGCCCAGCAACCGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: NFIIFFTTPARKASSTIFRPHAL*PSNRSQ
Trigger: CTGGGAGCGGTTGCTGGGCAACAGTGCGTGCGGCCT...GAAAATTGTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAAATGATGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS TCA 90 bp CAGGTCAAATCTTTTCAACTCCCACGGAACAGAGGCCTAGTCCAGTaGATTAATCTGCCCAACGGTATGAAGGTTAGAAGGCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: QVKSFQLPRNRGLVQ*INLPNGMKVRRQAR
Trigger: GCGCGCCTGCCTTCTAACCTTCATACCGTTGGGCAGATTAATTCACTGGACTAGGCCTCTGTTCCGTGGGAGTTGAAAAGATTTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393020.5
ENST00000455306.5
ENST00000464224.5
CDS CCA 90 bp AAATCCCAGCTCCTCTGCTTGTTGAACCAGAAGACTCTGATTACCTaGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGCTCTTTTATC +
Preference number: 5 (lower is better)
Translates to: KSQLLCLLNQKTLIT*NKPCLQGWCRGSFI
Trigger: GATAAAAGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGGTAATCAGAGTCTTCTGGTTCAACAAGCAGAGGAGCTGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp AAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGAGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: KGSTTQAFRERMNRMGWGASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...TCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCCTCACACCTGGCCAGGAGACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: CVDNLSEQVHILLTPGQETFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...CTCCTGGCCAGGTGTGAGGAGGATGTGGACCTGTTCAGAGAGGTTATCTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GTGTGTCACTGCCTGCAAGCTTTAACAAGACCTGCAAAAGGTCCGTCTTTAGCACCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: VCHCLQALTRPAKGPSLAPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...TGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: ERWRWYFPCCLEGLHGSMSPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...CATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 90 bp ATCCGTGCGGCAATGCTTCCAGAAAGCTTCCAGCCCTCCTTCCAGTaGAGAAAACGCTCTGCAAATAGTTCTTCCAAAGCCAACATCAAC +
Preference number: 5 (lower is better)
Translates to: IRAAMLPESFQPSFQ*RKRSANSSSKANIN
Trigger: GTTGATGTTGGCTTTGGAAGAACTATTTGCAGAGCGTTTTCTGCACTGGAAGGAGGGCTGGAAGCTTTCTGGAAGCATTGCCGCACGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442859.5
CDS-3UTR CAA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCAGGACAGCTTTCTGTaGCACAACTGGGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHQDSFL*HNWVIR
Trigger: TCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTG...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CCACATCCTCCTCACACCTGGCCAGGAGGCTCAAGCAGCCATCCCCAAATTCCTCTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: PHPPHTWPGGSSSHPQIPLLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...AGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHSPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTAGGCAGAGGGCAGCGTaGCCCACCAGAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVRQRAA*PTRTSS
Trigger: GGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GGGTGGTTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: GWLSTWSRSWTSCLTALHRLSSK*EMTALG
Trigger: GCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCT...GTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 90 bp TTACGTGCGGCAATGCTTCCAGAAAGCTTCCAGCCCTCCTTCCAGTaGAGAAAACGCTCTGCAAATAGTTCTTCCAAAGCCAACATCAAC +
Preference number: 5 (lower is better)
Translates to: LRAAMLPESFQPSFQ*RKRSANSSSKANIN
Trigger: GTTGATGTTGGCTTTGGAAGAACTATTTGCAGAGCGTTTTCTGCACTGGAAGGAGGGCTGGAAGCTTTCTGGAAGCATTGCCGCACGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429951.5
CDS CCA 90 bp GTATTATGGAATAGGACTCAGCAACTACTGATATACACAGCCACTTaGATGAGGCCCCAGAGAATTCTGCCACCTCTGCTGTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VLWNRTQQLLIYTAT*MRPQRILPPLLWLQ
Trigger: CTGAAGCCACAGCAGAGGTGGCAGAATTCTCTGGGGCCTCATCCAAGTGGCTGTGTATATCAGTAGTTGCTGAGTCCTATTCCATAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS CCA 90 bp AAGAACATTCGAACAGTAGAATGTCAGCGAGAACTATCCCCTACCTaGATCAGTCATGGTCCTGCCAGGAAACAGATGGCACACTTGCAC +
Preference number: 5 (lower is better)
Translates to: KNIRTVECQRELSPT*ISHGPARKQMAHLH
Trigger: GTGCAAGTGTGCCATCTGTTTCCTGGCAGGACCATGACTGATCCAGGTAGGGGATAGTTCTCGCTGACATTCTACTGTTCGAATGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525989.1
CDS-3UTR CAA 90 bp AAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTAGCATGTGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: KDGAGIFHAAWKVCMVACGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...ACATGCTACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CAAGCCTTCAGGGAAAGGATGAATCGCATGGGTTGGGGACAGTTGCATGTGGAGACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: QAFRERMNRMGWGQLHVETLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...CTCCACATGCAACTGTCCCCAACCCATGCGATTCATCCTTTCCCTGAAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp CATCATGAGTCCCAGGAGTGTGTAGATAACCTCTCTGAACAGGTCCACATCCTCGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: HHESQECVDNLSEQVHILASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...GAGGATGTGGACCTGTTCAGAGAGGTTATCTACACACTCCTGGGACTCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp CCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAAGGTCTGCATGGTCATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: PSERWRWYFPCCLEGLHGHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...ACCATGCAGACCTTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQRTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS TCA 90 bp GGCTCGTTCCTTTGCATCCTTCTCCACAGATGCCAAGAAGGCCTCTaGGTTTATTTCTTCTGCACTCTTCATAGCAGTTTGTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GSFLCILLHRCQEGL*VYFFCTLHSSLWRT
Trigger: AGTCCTCCACAAACTGCTATGAAGAGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCATCTGTGGAGAAGGATGCAAAGGAACGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000314756.7
ENST00000393020.5
ENST00000429951.5
ENST00000442859.5
ENST00000455306.5
ENST00000464224.5
ENST00000483239.6
ENST00000494714.5
ENST00000525965.5
ENST00000527781.1
ENST00000529221.6
ENST00000529850.5
ENST00000531164.5
CDS-3UTR CAA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGTCTCCAGGAGGTTCTaGGTGGTCACGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVVSRRF*VVTAVF
Trigger: GAACACAGCCGTGACCACCAAGAACCTCCTGGAGAC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGGGATCTGGTCAGGCTaGGAAAGGGTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNGIWSG*ERVSRR
Trigger: CCTCCTGGAGACCCTTTCCAAGCCTGACCAGATCCC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGTCAGGTCAAGGTGGTaGATGATCAGGCTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVVRSRW*MIRLRP
Trigger: CGGACGGAGCCTGATCATCAACCACCTTGACCTGAC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAGAACACCTGGAAGGTaGGCCTGGAACCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTRTPGR*AWNQTW
Trigger: CCAAGTCTGGTTCCAGGCCAACCTTCCAGGTGTTCT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS GCA 90 bp TGTGCATTTTTCATCACACTTGAGAGCCCACTCACAATCCACCAGTaGCTTCTCATAGTCCTCAAGTTTCATATAAGCCTGGGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: CAFFITLESPLTIHQ*LLIVLKFHISLGSV
Trigger: AACCGAGCCCAGGCTTATATGAAACTTGAGGACTATGAGAAGGCACTGGTGGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000314756.7
ENST00000393020.5
ENST00000442859.5
ENST00000494714.5
ENST00000527362.5
ENST00000529221.6
ENST00000531164.5
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACAGGACAGCTTTCTGTaGCACAACTGGGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQQDSFL*HNWVIR
Trigger: TCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: VMNLKGSTTQAFRERMNRSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...GCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TTGAGTACCTGGTCTAGATCTTGGACCAGTTGCTTAACTGCTTTGCACCTCAGTGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LSTWSRSWTSCLTALHLSASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...ACTGAGGTGCAAAGCAGTTAAGCAACTGGTCCAAGATCTAGACCAGGTACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCCTGCTGCACACTGCTaGCCAGAGCTTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCPAAHC*PELENR
Trigger: TCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAGG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPSPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQSPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCREDAT*GTSMQL
Trigger: TAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCTCCCAGCTCCTCTGCTaGTTGAACCAGAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTSQLLC*LNQKTL
Trigger: CAGAGTCTTCTGGTTCAACAAGCAGAGGAGCTGGGA...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCTGATTCGCCCAGCTTaGGACAGGAAATGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCLIRPA*DRKWRS
Trigger: ACTGCGCCATTTCCTGTCCAAAGCTGGGCGAATCAG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAAACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQTFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATGACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: MNLKGSTTQAFRERMNRMTFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...CATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPTFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GTGGAGATGAGGCCTTCTGAAAGATGGCGCTGGTATTTTCCATGCTGCCTGGAACTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: VEMRPSERWRWYFPCCLELLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...TTCCAGGCAGCATGGAAAATACCAGCGCCATCTTTCAGAAGGCCTCATCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTACTGCTTGCCAGAGCTaGAGAACAGACACACAGACC +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVTACQS*RTDTQT
Trigger: GGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACAAGTCCCATAGCAGTGTaGGCCTCCTTATCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTSPIAV*ASLSEK
Trigger: TTTCTCGGATAAGGAGGCCAACACTGCTATGGGACT...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGGCCTGGAACCAGACTaGGAATCTTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCGLEPD*ESFFQS
Trigger: GCTCTGGAAGAAAGATTCCAAGTCTGGTTCCAGGCC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AATTTCATCATTTTCTTTACCACTCCTGCTCGCAAGGCCTCCTCAACAATTTTCGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: NFIIFFTTPARKASSTIFEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...GAAAATTGTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGAAAATGATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS TCA 90 bp AACCTCTCAGGGACATTCCCGCTGATCACTAGTAACAGAATGGGATaGTCAGTAGGTTTTTGTTCACAGGTTGTTTGTAAGCTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: NLSGTFPLITSNRMG*SVGFCSQVVCKLKG
Trigger: GCCTTTGAGCTTACAAACAACCTGTGAACAAAAACCTACTGATCATCCCATTCTGTTACTAGTGATCAGCGGGAATGTCCCTGAGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489064.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCAGGACAGCTTTCTGTaGCACAACTGGGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNQDSFL*HNWVIR
Trigger: TCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGCAGGACAGCTTTCTGTaGCACAACTGGGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERQDSFL*HNWVIR
Trigger: TCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTG...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCSWLVP*HPSPQM
Trigger: CATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGA...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464224.5
ENST00000529221.6
CDS-3UTR CAA 90 bp TATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGATGAATCGCATACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: YEFKRQHHTSLQGKDESHTFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...ATGCGATTCATCCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCACCTTTCACCTGGGTTaGCAGCTTGGGGTTTATTTC +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTTFHLG*QLGVYF
Trigger: GAAATAAACCCCAAGCTGCAAACCCAGGTGAAAGGT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAGGAGCTGCTTACCTaGGGATCTGTCTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNEELLT*GSVFRT
Trigger: CGTTCTGAAGACAGATCCCAAGGTAAGCAGCTCCTC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp AAACACCTTCTTATGACCTCGTTGTCACTGATGATACTAAATCCATTGTGCATTAGGGAAGACGCAACGTaGGGCACCTCCATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: KHLLMTSLSLMILNPLCIREDAT*GTSMQL
Trigger: TAACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCT...AATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp GCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACACACAGCTCCTCTGCTTGTaGAACCAGAAGACTCTGATT +
Preference number: 5 (lower is better)
Translates to: AKIWKPLRCPSTNEWLNTQLLCL*NQKTLI
Trigger: AATCAGAGTCTTCTGGTTCAACAAGCAGAGGAGCTG...TGTGTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACGATATACACAGCCACTaGGATGAGGCCCCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNDIHSH*DEAPEN
Trigger: ATTCTCTGGGGCCTCATCCAAGTGGCTGTGTATATC...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp CGAGCTGAGCAGCTTCATCATAACGCTCAACTTTTTATCCAGTCTTATTACTTCGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: RAEQLHHNAQLFIQSYYFGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...GAAGTAATAAGACTGGATAAAAAGTTGAGCGTTATGATGAAGCTGCTCAGCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS-3UTR CAA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: SKVFISIGTTHGVHLCVPTLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...GGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp TTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAAGAACACCAGCAGCTCTaGTCAGGATTCCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: LFAIAKIWKPLRCPSTNEEHQQL*SGFLHP
Trigger: AGGATGGAGGAATCCTGACAAGAGCTGCTGGTGTTC...TTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGRLSSK*EMTALG
Trigger: GCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCT...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTATGAAGCTTTCTCAGTaGAGCAGCAAATCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVMKLSQ*SSKSGL
Trigger: GAGCCCAGATTTGCTGCTCAACTGAGAAAGCTTCAT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTATGAAGCTTTCTCAGTaGAGCAGCAAATCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCMKLSQ*SSKSGL
Trigger: GAGCCCAGATTTGCTGCTCAACTGAGAAAGCTTCAT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNGLIIV*FKVVLH
Trigger: ATGCAGGACCACCTTGAACAAGACTATGATCAGTCC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTTLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGCATCCGCCAAGACTTaGTTTTCCCTTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: ALFAIAKIWKPLRCPSTNASAKT*FSLLLL
Trigger: CAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGC...ATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp ATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCAATGAATGGCTAAACCATTTTTCATCACACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: IAKIWKPLRCPSTNEWLNHFSSH*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTGTGATGAAAAATG...GTTTAGCCATTCATTGGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCTLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTCCCCAACTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: KVFISIGTTHGVHLCVPQLLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...TTGGGGAACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp ACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTGTTATAAAAGAGAATGACTaGAGAGCCCACTCACAATCC +
Preference number: 5 (lower is better)
Translates to: TSKVFISIGTTHGVHLCVIKEND*RAHSQS
Trigger: GGATTGTGAGTGGGCTCTCAAGTCATTCTCTTTTAT...AACACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483239.6
CDS-3UTR CAA 90 bp ATGAAGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAACTCTTCATAGCAGTTaGTGGAGGACTGATCATAGT +
Preference number: 5 (lower is better)
Translates to: MKSLCYEFKRQHHTSLQGTLHSS*WRTDHS
Trigger: ACTATGATCAGTCCTCCACAAACTGCTATGAAGAGT...TCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS-3UTR CAA 90 bp GCAGCTTTATTTGCAATAGCTAAAATCTGGAAACCGCTCAGATGTCCTTCAACCCTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: AALFAIAKIWKPLRCPSTLLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...GGTTGAAGGACATCTGAGCGGTTTCCAGATTTTAGCTATTGCAAATAAAGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS-3UTR CAA 90 bp GATACATCAAAGGTCTTTATTAGCATAGGAACAACACACGGTGTGCATCTGTGTCTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: DTSKVFISIGTTHGVHLCLLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...ACACAGATGCACACCGTGTGTTGTTCCTATGCTAATAAAGACCTTTGATGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464224.5
ENST00000483239.6
ENST00000529221.6
CDS-3UTR CAA 90 bp AGTCATTATGTTATGAATTTAAAAGGCAGCACCACACAAGCCTTCAGGGAAAGGCTTCTTATGACCTCGTaGTCACTGATGATACTAAAT +
Preference number: 5 (lower is better)
Translates to: SHYVMNLKGSTTQAFRERLLMTS*SLMILN
Trigger: ATTTAGTATCATCAGTGACAACGAGGTCATAAGAAG...CCTTTCCCTGAAGGCTTGTGTGGTGCTGCCTTTTAAATTCATAACATAATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 72 bp ACCGCTCCCAGGCGTCCGCAAGTCCCGGGCCCTCCATaGAGGTCCCAGACCGCAGCCGTCCCAGACCGCAGC +
Preference number: 6 (lower is better)
Translates to: TAPRRPQVPGPP*RSQTAAVPDRS
Trigger: GCTGCGGTCTGGGACGGCTGCGGTCTGGGACCTGCATGGAGGGCCCGGGACTTGCGGACGCCTGGGAGCGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 72 bp CCGCCGGGCGCAAAGAGGCCAGGCCGCACGCACTGTTaGCCAGCAACCGCTCCCAGGCGTCCGCAAGTCCCG +
Preference number: 6 (lower is better)
Translates to: PPGAKRPGRTHC*PATAPRRPQVP
Trigger: CGGGACTTGCGGACGCCTGGGAGCGGTTGCTGGGCAACAGTGCGTGCGGCCTGGCCTCTTTGCGCCCGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 72 bp ACCTTCCCATGCTCTGGGGCCCAAAGCAGCGTCCTCTaGTCGGCTCTGAAGGCCAGTGCAGGACCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: TFPCSGAQSSVL*SALKASAGPAP
Trigger: GGGAGCTGGTCCTGCACTGGCCTTCAGAGCCGAGCAGAGGACGCTGCTTTGGGCCCCAGAGCATGGGAAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS GCA 72 bp GGCTGGGCTCAGCTGTGCACAGCTTCCCCAGAGCAATaGCTGCGTTCACCTGCACGGCCGTCTTCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: GWAQLCTASPEQ*LRSPARPSSVC
Trigger: ACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCACAGCTGAGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496311.1
CDS GCA 72 bp CCCAACGGTATGAAGGTTAGAAGGCAGGCGCGCGGGTaGATGGACAGGAGACAACCTCTGTCTCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: PNGMKVRRQARG*MDRRQPLSPRA
Trigger: TGCCCTGGGAGACAGAGGTTGTCTCCTGTCCATGCACCCGCGCGCCTGCCTTCTAACCTTCATACCGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393020.5
ENST00000455306.5
ENST00000464224.5
CDS CAA 90 bp CCTGCGAGGAGACAGAGCTTCAGGTGCAGCAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGCAGGCACTCTGGGCTCAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: PARRQSFRCSRLSSK*EMTALGRHSGLSCA
Trigger: TGCACAGCTGAGCCCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCTCCTCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS TCA 72 bp GCTTCAGGTGCAGCAGACTCTCTTCCAAATTGGAGATaGCTGCTCTCGGCAGGCACTCTGGGCTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ASGAADSLPNWR*LLSAGTLGSAV
Trigger: CACAGCTGAGCCCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 72 bp CAGGTGCAGCAGACTCTCTTCCAAATTGGAGATGACTaGTCTCGGCAGGCACTCTGGGCTCAGCTGTGCACA +
Preference number: 6 (lower is better)
Translates to: QVQQTLFQIGDD*SRQALWAQLCT
Trigger: TGTGCACAGCTGAGCCCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS GCA 72 bp GAGGTCTTATCTGACAGCCCCCAGGTGGAGGCAATGTaGCAGCAACCTACACCTGCAGGGTATGCAACAGGA +
Preference number: 6 (lower is better)
Translates to: EVLSDSPQVEAM*QQPTPAGYATG
Trigger: TCCTGTTGCATACCCTGCAGGTGTAGGTTGCTGGCACATTGCCTCCACCTGGGGGCTGTCAGATAAGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480233.1
CDS GCA 72 bp ATCGCAGGGCTAGCAACAGTGGACAGCCATTACCACTaGTGGGCTCGGTTGGTGTACAGCACTTTCATGTCC +
Preference number: 6 (lower is better)
Translates to: IAGLATVDSHYH*WARLVYSTFMS
Trigger: GGACATGAAAGTGCTGTACACCAACCGAGCCCAGCAGTGGTAATGGCTGTCCACTGTTGCTAGCCCTGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS CCA 72 bp CTCCTCTGCTTGTTGAACCAGAAGACTCTGATTACCTaGAACAAGCCGTGTCTCCAAGGGTGGTGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: LLCLLNQKTLIT*NKPCLQGWCRG
Trigger: GCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGGTAATCAGAGTCTTCTGGTTCAACAAGCAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS CCA 72 bp GCAGGGCTAGCAACAGTGGACAGCCATTACCACTGCTaGGCTCGGTTGGTGTACAGCACTTTCATGTCCTTC +
Preference number: 6 (lower is better)
Translates to: AGLATVDSHYHC*ARLVYSTFMSF
Trigger: GAAGGACATGAAAGTGCTGTACACCAACCGAGCCCAGCAGTGGTAATGGCTGTCCACTGTTGCTAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464224.5
CDS CAA 72 bp AGACAGAGCTTCAGGTGCAGCAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGCAGGCACTCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: RQSFRCSRLSSK*EMTALGRHSGL
Trigger: GAGCCCAGAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314756.7
ENST00000494714.5
CDS TCA 72 bp GAGAATTCTGCCACCTCTGCTGTGGCTTCAGGATGGTaGTGGAGTTCCATCCCGGCCACATCCTCTTTAGGA +
Preference number: 6 (lower is better)
Translates to: ENSATSAVASGW*WSSIPATSSLG
Trigger: TCCTAAAGAGGATGTGGCCGGGATGGAACTCCATCACCATCCTGAAGCCACAGCAGAGGTGGCAGAATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS CCA 72 bp AGAAAGCCCCATGGATACATCCCTGCCTCACTGACCTaGGCTCGGTTGGTGTACAGCACTTTCATGTCCTTC +
Preference number: 6 (lower is better)
Translates to: RKPHGYIPASLT*ARLVYSTFMSF
Trigger: GAAGGACATGAAAGTGCTGTACACCAACCGAGCCCAGGTCAGTGAGGCAGGGATGTATCCATGGGGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527781.1
CDS CAA 72 bp CATGGATACATCCCTGCCTCACTGACCTGGGCTCGGTaGGTGTACAGCACTTTCATGTCCTTCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: HGYIPASLTWAR*VYSTFMSFSFS
Trigger: GGAGAAGCTGAAGGACATGAAAGTGCTGTACACCAACCGAGCCCAGGTCAGTGAGGCAGGGATGTATCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527781.1
CDS TCA 72 bp GGTGGATCCACACTGGAGAGGGAGAATACTAGCATGTaGAACATCTCTTCCCACCTGCGAGGAGACAGAGCT +
Preference number: 6 (lower is better)
Translates to: GGSTLERENTSM*NISSHLRGDRA
Trigger: AGCTCTGTCTCCTCGCAGGTGGGAAGAGATGTTTCACATGCTAGTATTCTCCCTCTCCAGTGTGGATCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS CCA 72 bp AACAAGTTTGGGGCGGTGGCGGGGGTGGATCCACACTaGAGAGGGAGAATACTAGCATGTGAAACATCTCTT +
Preference number: 6 (lower is better)
Translates to: NKFGAVAGVDPH*RGRILACETSL
Trigger: AAGAGATGTTTCACATGCTAGTATTCTCCCTCTCCAGTGTGGATCCACCCCCGCCACCGCCCCAAACTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314756.7
ENST00000462711.2
ENST00000494714.5
CDS CCA 72 bp CGAACAGTAGAATGTCAGCGAGAACTATCCCCTACCTaGATCAGTCATGGTCCTGCCAGGAAACAGATGGCA +
Preference number: 6 (lower is better)
Translates to: RTVECQRELSPT*ISHGPARKQMA
Trigger: TGCCATCTGTTTCCTGGCAGGACCATGACTGATCCAGGTAGGGGATAGTTCTCGCTGACATTCTACTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525989.1
CDS CAA 90 bp CCTGCGAGGAGACAGAGCTTCAGGTGCAGCAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGCAGGCACTTTTTATCCAGTCTTATT +
Preference number: 6 (lower is better)
Translates to: PARRQSFRCSRLSSK*EMTALGRHFLSSLI
Trigger: AATAAGACTGGATAAAAAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCTCCTCGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS CCA 72 bp AATAGGACTCAGCAACTACTGATATACACAGCCACTTaGATGAGGCCCCAGAGAATTCTGCCACCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: NRTQQLLIYTAT*MRPQRILPPLL
Trigger: CAGCAGAGGTGGCAGAATTCTCTGGGGCCTCATCCAAGTGGCTGTGTATATCAGTAGTTGCTGAGTCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS CAA 72 bp AGACAGAGCTTCAGGTGCAGCAGACTCTCTTCCAAATaGGAGATGACTGCTCTCGGCAGGCACTTTTTATCC +
Preference number: 6 (lower is better)
Translates to: RQSFRCSRLSSK*EMTALGRHFLS
Trigger: GGATAAAAAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGCTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS CAA 90 bp TCTTCTGCACTCTTCATAGCAGTTTGTGGAGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCATTCATCCTCCTCCTGGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSALFIAVCGGLIIV*FKVVLHSSSSWSSS
Trigger: GGAGGAAGACCAGGAGGAGGATGAATGCAGGACCACCTTGAACAAGACTATGATCAGTCCTCCACAAACTGCTATGAAGAGTGCAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000314756.7
ENST00000393020.5
ENST00000429951.5
ENST00000442859.5
ENST00000455306.5
ENST00000464224.5
ENST00000483239.6
ENST00000489064.5
ENST00000494714.5
ENST00000525965.5
ENST00000527781.1
ENST00000529221.6
ENST00000529850.5
ENST00000531164.5
CDS TCA 72 bp GCTTCAGGTGCAGCAGACTCTCTTCCAAATTGGAGATaGCTGCTCTCGGCAGGCACTTTTTATCCAGTCTTA +
Preference number: 6 (lower is better)
Translates to: ASGAADSLPNWR*LLSAGTFYPVL
Trigger: TAAGACTGGATAAAAAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS CCA 72 bp ACTCTGATTACCTGGAACAAGCCGTGTCTCCAAGGGTaGTGTCGGGGCTCTTTTATCCAGTCTTATTACTTC +
Preference number: 6 (lower is better)
Translates to: TLITWNKPCLQG*CRGSFIQSYYF
Trigger: GAAGTAATAAGACTGGATAAAAGAGCCCCGACACCACCCTTGGAGACACGGCTTGTTCCAGGTAATCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393020.5
CDS CAA 72 bp CTCTTCATAGCAGTTTGTGGAGGACTGATCATAGTCTaGTTCAAGGTGGTCCTGCATTCATCCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LFIAVCGGLIIV*FKVVLHSSSSW
Trigger: CCAGGAGGAGGATGAATGCAGGACCACCTTGAACAAGACTATGATCAGTCCTCCACAAACTGCTATGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000314756.7
ENST00000393020.5
ENST00000429951.5
ENST00000442859.5
ENST00000455306.5
ENST00000464224.5
ENST00000483239.6
ENST00000489064.5
ENST00000494714.5
ENST00000525965.5
ENST00000527781.1
ENST00000529221.6
ENST00000529850.5
ENST00000531164.5
CDS CAA 90 bp CATCCGCCAAGACTTTGTTTTCCCTTCTTCTCTTGGCTCGTTCCTTaGCATCCTTCTCCACAGATGCCAAGAAGGCCTCTGAGTTTATTT +
Preference number: 6 (lower is better)
Translates to: HPPRLCFPFFSWLVP*HPSPQMPRRPLSLF
Trigger: AAATAAACTCAGAGGCCTTCTTGGCATCTGTGGAGAAGGATGCAAAGGAACGAGCCAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000314756.7
ENST00000393020.5
ENST00000429951.5
ENST00000442859.5
ENST00000455306.5
ENST00000464224.5
ENST00000483239.6
ENST00000494714.5
ENST00000525965.5
ENST00000527781.1
ENST00000529221.6
ENST00000529850.5
ENST00000531164.5
CDS TCA 72 bp TCTTTTCAACTCCCACGGAACAGAGGCCTAGTCCAGTaGATTAATCTGCCCAACGGTATGAAGGTTAGAAGG +
Preference number: 6 (lower is better)
Translates to: SFQLPRNRGLVQ*INLPNGMKVRR
Trigger: CCTTCTAACCTTCATACCGTTGGGCAGATTAATTCACTGGACTAGGCCTCTGTTCCGTGGGAGTTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393020.5
ENST00000455306.5
ENST00000464224.5
ENST00000524580.6
CDS GCA 72 bp CAGGTGCAGCAGACTCTCTTCCAAATTGGAGATGACTaGTCTCGGCAGGCACTTTTTATCCAGTCTTATTAC +
Preference number: 6 (lower is better)
Translates to: QVQQTLFQIGDD*SRQALFIQSYY
Trigger: GTAATAAGACTGGATAAAAAGTGCCTGCCGAGAGCAGTCATCTCCAATTTGGAAGAGAGTCTGCTGCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462711.2
CDS TCA 72 bp GGGACATTCCCGCTGATCACTAGTAACAGAATGGGATaGTCAGTAGGTTTTTGTTCACAGGTTGTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: GTFPLITSNRMG*SVGFCSQVVCK
Trigger: CTTACAAACAACCTGTGAACAAAAACCTACTGATCATCCCATTCTGTTACTAGTGATCAGCGGGAATGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489064.5