RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTBK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000128881

Ensembl transcript IDs: ENST00000267890.11, ENST00000562880.5, ENST00000564431.5, ENST00000566931.1, ENST00000567274.5, ENST00000567485.1, ENST00000567840.5, ENST00000622375.4

Found 651 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCCACTGGGTGAGGACAGGGAAGTAGGATGTCCCAACACCCTCTaGGGGTTTTCATGCATTAATCCCGCCATATGGGCTGATGGTTGG +
Preference number: 1 (lower is better)
Translates to: VPLGEDREVGCPNTL*GFSCINPAIWADGW
Trigger: CCAACCATCAGCCCATATGGCGGGATTAATGCATGAAAACCCTCAGAGGGTGTTGGGACATCCTACTTCCCTGTCCTCACCCAGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 90 bp TGTTCCCTAGGTCAAGGAACCCAGAGCCAGGGTACCTGGGAGGCATaGTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCA +
Preference number: 1 (lower is better)
Translates to: CSLGQGTQSQGTWEA*SASPVYIYSVPILP
Trigger: TGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGACCATGCCTCCCAGGTACCCTGGCTCTGGGTTCCTTGACCTAGGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 90 bp ATCCAATCTTGTTCCCTAGGTCAAGGAACCCAGAGCCAGGGTACCTaGGAGGCATGGTCAGCATCGCCAGTGTACATATATTCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: IQSCSLGQGTQSQGT*EAWSASPVYIYSVP
Trigger: GGGCACAGAATATATGTACACTGGCGATGCTGACCATGCCTCCCAGGTACCCTGGCTCTGGGTTCCTTGACCTAGGGAACAAGATTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 90 bp AAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCAACTGTGACTaGCTAGGTAACCAGCTATTCTGTTGTGACAGAAGAAACCAGGTA +
Preference number: 1 (lower is better)
Translates to: KYLQGLTREGKGNCD*LGNQLFCCDRRNQV
Trigger: TACCTGGTTTCTTCTGTCACAACAGAATAGCTGGTTACCTAGTCAGTCACAGTTGCCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 90 bp TGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAATTGAGGTGTaGAGCATCCAGATTCCCCTTTATGTGGATAGGGATCCCTGTGCC +
Preference number: 1 (lower is better)
Translates to: CHNSKFSQGFLRIEV*SIQIPLYVDRDPCA
Trigger: GGCACAGGGATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAATCCCTGACTGAACTTGGAATTATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 90 bp ATCCAGATTCCCCTTTATGTGGATAGGGATCCCTGTGCCATGTCTTaGACTTACCTAAGAACTATAGGAATTCTCCATGTACCTCCTACA +
Preference number: 1 (lower is better)
Translates to: IQIPLYVDRDPCAMS*TYLRTIGILHVPPT
Trigger: TGTAGGAGGTACATGGAGAATTCCTATAGTTCTTAGGTAAGTGCAAGACATGGCACAGGGATCCCTATCCACATAAAGGGGAATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 90 bp ATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGATGCTaGTATTACAAACAGTTGGAACCCAGAAGACTTAAGGAAGCAGTC +
Preference number: 1 (lower is better)
Translates to: ITVQSIVLPSYHLGC*YYKQLEPRRLKEAV
Trigger: GACTGCTTCCTTAAGTCTTCTGGGTTCCAACTGTTTGTAATATCAGCATCCAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR GCA 90 bp AATTATATCATCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTaGCTCATCCAATCTTGTTCCCTAGGTCAAGGAACCCAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: NYIISKFYSHMGSKI*LIQSCSLGQGTQSQ
Trigger: CTGGCTCTGGGTTCCTTGACCTAGGGAACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGATGATATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 90 bp TTGTGCTTCCCTCGTATCATCTTGGATGCTGATATTACAAACAGTTaGAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTT +
Preference number: 1 (lower is better)
Translates to: LCFPRIILDADITNS*NPEDLRKQSTLVSF
Trigger: AAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTCCAACTGTTTGTAATATCAGCATCCAAGATGATACGAGGGAAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR TCA 90 bp TCTAAAGGAGGACACTTAACAGAGATGAAAGGGCATCTTCTATCTTaGAGGCTATTAACCCACACTTTCTTTCTCTCCCTAAACACTAAA +
Preference number: 1 (lower is better)
Translates to: SKGGHLTEMKGHLLS*RLLTHTFFLSLNTK
Trigger: TTTAGTGTTTAGGGAGAGAAAGAAAGTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCCTTTCATCTCTGTTAAGTGTCCTCCTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR TCA 90 bp AAAGGTCTAAAAATGCACCTGTGGTTTCTGAACTTGGGTATACGCTaGTACATAAGGACTACCATAGAAGTTACATGCCTTAATCCTGTA +
Preference number: 1 (lower is better)
Translates to: KGLKMHLWFLNLGIR*YIRTTIEVTCLNPV
Trigger: TACAGGATTAAGGCATGTAACTTCTATGGTAGTCCTTATGTATCAGCGTATACCCAAGTTCAGAAACCACAGGTGCATTTTTAGACCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 90 bp AGGCAAAGTCCCGACACATCTGTGGTAAGTGCACATAAACAGAAATaGGCAGATTTTGAAAGTGAATGCAAACAACTTAATTCCAAAATA +
Preference number: 1 (lower is better)
Translates to: RQSPDTSVVSAHKQK*ADFESECKQLNSKI
Trigger: TATTTTGGAATTAAGTTGTTTGCATTCACTTTCAAAATCTGCCCATTTCTGTTTATGTGCACTTACCACAGATGTGTCGGGACTTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 90 bp CAAGTGTACATGAGGCACACAATAGAAAAGGAATTTCGCCATCTGTaGTCTCGAAATTACAAATGGAGAATGACAAAGAATGACTCTATA +
Preference number: 1 (lower is better)
Translates to: QVYMRHTIEKEFRHL*SRNYKWRMTKNDSI
Trigger: TATAGAGTCATTCTTTGTCATTCTCCATTTGTAATTTCGAGATCACAGATGGCGAAATTCCTTTTCTATTGTGTGCCTCATGTACACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 90 bp AGGCTATTAACCCACACTTTCTTTCTCTCCCTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGACTTTTCTTTCCTTTACCTAACTTT +
Preference number: 1 (lower is better)
Translates to: RLLTHTFFLSLNTKA*KIALVRLFFPLPNF
Trigger: AAAGTTAGGTAAAGGAAAGAAAAGTCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAGGGAGAGAAAGAAAGTGTGGGTTAATAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR CCA 90 bp TTAAAGTCATCTAACTCATTGGTCTTGTTCAACAAGAAAGAATTCTaGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTA +
Preference number: 1 (lower is better)
Translates to: LKSSNSLVLFNKKEF*FVAESDLTAANSSL
Trigger: TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTTAGATGACTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAAAGTACCTCTCCCCTaGGGCAAAGTCCCGACACAT +
Preference number: 2 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTKVPLP*GKVPTH
Trigger: ATGTGTCGGGACTTTGCCTCAGGGGAGAGGTACTTT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTGTGTCACAGGTGCTTaGTCAGGGCTGCCAACTTCT +
Preference number: 2 (lower is better)
Translates to: VSIASVHIFCAHTTTNASCVTGA*SGLPTS
Trigger: AGAAGTTGGCAGCCCTGAGCAAGCACCTGTGACACA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 90 bp TGGAAGGAATCTCTGAAGATACTGAAGAACCTCAAGTTCCCTACATaGCTAGGAGCCAAGGGAAGGAGACACTGTACACCTAGAGCGCTG +
Preference number: 2 (lower is better)
Translates to: WKESLKILKNLKFPT*LGAKGRRHCTPRAL
Trigger: CAGCGCTCTAGGTGTACAGTGTCTCCTTCCCTTGGCTCCTAGCAATGTAGGGAACTTGAGGTTCTTCAGTATCTTCAGAGATTCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTGGAAGCAGTCTACTCTaGTCAGTTTTCCTTCTACTC +
Preference number: 2 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTGSSLL*SVFLLL
Trigger: GAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCC...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAAGAAGCCCAAATGTTaGACTAAAACACAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTKKPKC*TKTQEK
Trigger: CTTCTCCTGTGTTTTAGTTCAACATTTGGGCTTCTT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTGTGGAAATTCAAGGTaGCCTGATCTTGTCACATAC +
Preference number: 2 (lower is better)
Translates to: VSIASVHIFCAHTTTNASCGNSR*PDLVTY
Trigger: GTATGTGACAAGATCAGGTCACCTTGAATTTCCACA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 90 bp TGGCAGCAGAATTCAGGAGAAATGCTACCTAAAGTGATTGAGCTGTaGCTAATTCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTA +
Preference number: 2 (lower is better)
Translates to: WQQNSGEMLPKVIEL*LILPSVPLKYLQGL
Trigger: TAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGAATTAGCAACAGCTCAATCACTTTAGGTAGCATTTCTCCTGAATTCTGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGGGCATCTTCTATCTTaGAGGCTATTAACCCACACT +
Preference number: 2 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDGHLLS*RLLTHT
Trigger: AGTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTCATTGCACAGGGCCATaGAAGGAAAGGCTTCACTAC +
Preference number: 2 (lower is better)
Translates to: SANSIVTWAQRSASSNLVHCTGP*KERLHY
Trigger: GTAGTGAAGCCTTTCCTTTCATGGCCCTGTGCAATG...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 90 bp AACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAATaGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATC +
Preference number: 2 (lower is better)
Translates to: NFTVIIPSSVRDFSE*RCAASRFPFMWIGI
Trigger: GATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGGGCATCTTCTATCTTaGAGGCTATTAACCCACACT +
Preference number: 2 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSGHLLS*RLLTHT
Trigger: AGTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGTACAGGGACACACATaGATCAGGTTTAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: FLNLKSQSKALCFPRIILVQGHT*IRFRRK
Trigger: CTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTAC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCCTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGA +
Preference number: 2 (lower is better)
Translates to: VSIASVHIFCAHTTTNASLNTKA*KIALVR
Trigger: TCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAG...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 90 bp AATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTaGGATGCTGATATTACAAACAGTTGGAACCCAGAAGACTTAAGG +
Preference number: 2 (lower is better)
Translates to: NLKSQSKALCFPRII*DADITNSWNPEDLR
Trigger: CCTTAAGTCTTCTGGGTTCCAACTGTTTGTAATATCAGCATCCAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGTACAGGGACACACATaGATCAGGTTTAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLVQGHT*IRFRRK
Trigger: CTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTAC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACAGTCCAAAGCATTGTaGTTCCCTCGTATCATCTTG +
Preference number: 2 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLQSKAL*FPRIIL
Trigger: CAAGATGATACGAGGGAAGCACAATGCTTTGGACTG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGAATTTCGCCATCTGTaGTCTCGAAATTACAAATGG +
Preference number: 2 (lower is better)
Translates to: SANSIVTWAQRSASSNLVEFRHL*SRNYKW
Trigger: CCATTTGTAATTTCGAGATCACAGATGGCGAAATTC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTATGTCCCAACACCCTCTaGGGGTTTTCATGCATTAAT +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLCPNTL*GFSCIN
Trigger: ATTAATGCATGAAAACCCTCAGAGGGTGTTGGGACA...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAAACGCCTCTACGCTGTaGAAGAAATCACTATGTGTG +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLNASTL*KKSLCV
Trigger: CACACATAGTGATTTCTTGCACAGCGTAGAGGCGTT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTGGGTTTATAAAACATaGACCAATGTACACTTTCTC +
Preference number: 2 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDWVYKT*TNVHFL
Trigger: GAGAAAGTGTACATTGGTGCATGTTTTATAAACCCA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGCTTTGTCACCTCAGTaGACTACTTTGGCTGATGAA +
Preference number: 2 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDALSPQ*TTLADE
Trigger: TTCATCAGCCAAAGTAGTCCACTGAGGTGACAAAGC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCAAGCCAAATATACATaGATACTGGCTCCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYQAKYT*ILAPWQ
Trigger: TTGCCAGGGAGCCAGTATTCATGTATATTTGGCTTG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR GCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGAGAAAACATTCAGTTaGCACATTCCCATCACTGTC +
Preference number: 2 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDEKTFS*HIPITV
Trigger: GACAGTGATGGGAATGTGGCAACTGAATGTTTTCTC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACTGAATTCTGGATCCTaGTTCTCGTATCACCAATTC +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLLNSGS*FSYHQF
Trigger: GAATTGGTGATACGAGAAGCAGGATCCAGAATTCAG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGAAGCAGTCTACTCTaGTCAGTTTTCCTTCTACTC +
Preference number: 2 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGSSLL*SVFLLL
Trigger: GAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR CAA 90 bp ATAAGGACTACCATAGAAGTTACATGCCTTAATCCTGTAATACTTTaGTGTGGTATCATTCTGCTAATATATTGTCCACAGGGCCAAACC +
Preference number: 2 (lower is better)
Translates to: IRTTIEVTCLNPVIL*CGIILLIYCPQGQT
Trigger: GGTTTGGCCCTGTGGACAATATATTAGCAGAATGATACCACACAAAAGTATTACAGGATTAAGGCATGTAACTTCTATGGTAGTCCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACTTCTATTTTTCACCTaGGAGACATCTAAAAGCGCA +
Preference number: 2 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRLLFFT*ETSKSA
Trigger: TGCGCTTTTAGATGTCTCTCAGGTGAAAAATAGAAG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR TCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACTCACTAAATCATTCTaGATTCTGGATCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRLTKSF*ILDPAS
Trigger: AGAAGCAGGATCCAGAATTCAGAATGATTTAGTGAG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATCATGTTACTTTCTTTTaGAAGAGAAGATCAACACTG +
Preference number: 2 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNHVTFF*KRRSTL
Trigger: CAGTGTTGATCTTCTCTTGCAAAAGAAAGTAACATG...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGA +
Preference number: 2 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLNTKA*KIALVR
Trigger: TCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAAATATACATGAATACTaGCTCCCTGGCAACAGACTT +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLNIHEY*LPGNRL
Trigger: AAGTCTGTTGCCAGGGAGCCAGTATTCATGTATATT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAAATTCTATAGTCACATaGGCTCAAAGATCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLNSIVT*AQRSAS
Trigger: TGAGGCAGATCTTTGAGCCCATGTGACTATAGAATT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 90 bp GAAGAGAGGGAGAGAAAAGTGGAATTATTAAAGTCATCTAACTCATaGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCT +
Preference number: 2 (lower is better)
Translates to: EERERKVELLKSSNS*VLFNKKEFWFVAES
Trigger: AGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTTAGATGACTTTAATAATTCCACTTTTCTCTCCCTCTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAATATACATGAATACTaGCTCCCTGGCAACAGACTT +
Preference number: 2 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYNIHEY*LPGNRL
Trigger: AAGTCTGTTGCCAGGGAGCCAGTATTCATGTATATT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTATCCCTCGTATCATCTTaGATGCTGATATTACAAACA +
Preference number: 2 (lower is better)
Translates to: KEFWFVAESDLTAANSSLSLVSS*MLILQT
Trigger: TGTTTGTAATATCAGCATCCAAGATGATACGAGGGA...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAAATCATTCTGAATTCTaGATCCTGCTTCTCGTATCA +
Preference number: 2 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRNHSEF*ILLLVS
Trigger: TGATACGAGAAGCAGGATCCAGAATTCAGAATGATT...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACTAAAAATGCACCTGTaGTTTCTGAACTTGGGTATA +
Preference number: 2 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRLKMHL*FLNLGI
Trigger: TATACCCAAGTTCAGAAACCACAGGTGCATTTTTAG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp GGTGAGGACAGGGAAGTAGGATGTCCCAACACCCTCTaGGGGTTTTCATGCATTAATCCCGCCATATGGGCT +
Preference number: 3 (lower is better)
Translates to: GEDREVGCPNTL*GFSCINPAIWA
Trigger: AGCCCATATGGCGGGATTAATGCATGAAAACCCTCAGAGGGTGTTGGGACATCCTACTTCCCTGTCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp CTCCATGTTTCTGCCGATACTCTGTCCTTGGTTGCCTaGGCAAAATTGTATAAAGGGAGCTGCTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LHVSADTLSLVA*AKLYKGSCLEG
Trigger: CCCCTCCAAGCAGCTCCCTTTATACAATTTTGCTCAGGCAACCAAGGACAGAGTATCGGCAGAAACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 72 bp GAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTaGATAGGGATCCCTGTGCCATGTCTTGCACTTACC +
Preference number: 3 (lower is better)
Translates to: ELRCAASRFPFM*IGIPVPCLALT
Trigger: GGTAAGTGCAAGACATGGCACAGGGATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAGGGCATCTTCTATCTaGAAGGCTATTAACCCACAC +
Preference number: 3 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTRASSI*KAINPH
Trigger: GTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCCT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp CAGGGACTAACAAGGGAAGGCAAGGGCAACTGTGACTaGCTAGGTAACCAGCTATTCTGTTGTGACAGAAGA +
Preference number: 3 (lower is better)
Translates to: QGLTREGKGNCD*LGNQLFCCDRR
Trigger: TCTTCTGTCACAACAGAATAGCTGGTTACCTAGTCAGTCACAGTTGCCCTTGCCTTCCCTTGTTAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGAGAGAAAACATTCAGTaGCCACATTCCCATCACTGT +
Preference number: 3 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGRENIQ*PHSHHC
Trigger: ACAGTGATGGGAATGTGGCAACTGAATGTTTTCTCT...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACTGCCCACCCTTGCATaGTACACAGGGAAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLPTLA*YTGKAR
Trigger: TCTTGCCTTCCCTGTGTACAATGCAAGGGTGGGCAG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAGAAATGGGCAGATTTaGAAAGTGAATGCAAACAAC +
Preference number: 3 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTRNGQI*KVNANN
Trigger: GTTGTTTGCATTCACTTTCAAAATCTGCCCATTTCT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp ATAACCTATCTTGGCTTGTTAAATACTGCCCACCCTTaGATTGTACACAGGGAAGGCAAGAAGACTCTGAGG +
Preference number: 3 (lower is better)
Translates to: ITYLGLLNTAHP*IVHREGKKTLR
Trigger: CCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGGGTGGGCAGTATTTAACAAGCCAAGATAGGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp TCCAAGTTCAGTCAGGGATTTCTCAGAATTGAGGTGTaGAGCATCCAGATTCCCCTTTATGTGGATAGGGAT +
Preference number: 3 (lower is better)
Translates to: SKFSQGFLRIEV*SIQIPLYVDRD
Trigger: ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAATCCCTGACTGAACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp TGTACAGGTGGCCTATACAAAAGCACTCCATGTTTCTaGCGATACTCTGTCCTTGGTTGCCTGAGCAAAATT +
Preference number: 3 (lower is better)
Translates to: CTGGLYKSTPCF*RYSVLGCLSKI
Trigger: AATTTTGCTCAGGCAACCAAGGACAGAGTATCGGCAGAAACATGGAGTGCTTTTGTATAGGCCACCTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp AGAGGAGGCAGAAAACCGTTACATTGCACAGGGCCATaGAAGGAAAGGCTTCACTACTTTTACATGTTACCT +
Preference number: 3 (lower is better)
Translates to: RGGRKPLHCTGP*KERLHYFYMLP
Trigger: AGGTAACATGTAAAAGTAGTGAAGCCTTTCCTTTCATGGCCCTGTGCAATGTAACGGTTTTCTGCCTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp CCCCTTTATGTGGATAGGGATCCCTGTGCCATGTCTTaGACTTACCTAAGAACTATAGGAATTCTCCATGTA +
Preference number: 3 (lower is better)
Translates to: PLYVDRDPCAMS*TYLRTIGILHV
Trigger: TACATGGAGAATTCCTATAGTTCTTAGGTAAGTGCAAGACATGGCACAGGGATCCCTATCCACATAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp ATCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTaGCTCATCCAATCTTGTTCCCTAGGTCAAGGAACC +
Preference number: 3 (lower is better)
Translates to: ISKFYSHMGSKI*LIQSCSLGQGT
Trigger: GGTTCCTTGACCTAGGGAACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTATAGACCCTGAGGATTaGGCAGCAGAATTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: SANSIVTWAQRSASSNLVIDPED*AAEFRR
Trigger: TCTCCTGAATTCTGCTGCCAAATCCTCAGGGTCTAT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAGGGATTTCTCAGAATaGAGGTGTGCAGCATCCAGA +
Preference number: 3 (lower is better)
Translates to: SANSIVTWAQRSASSNLVRDFSE*RCAASR
Trigger: TCTGGATGCTGCACACCTCAATTCTGAGAAATCCCT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 72 bp CCTCGTATCATCTTGGATGCTGATATTACAAACAGTTaGAACCCAGAAGACTTAAGGAAGCAGTCTACTCTG +
Preference number: 3 (lower is better)
Translates to: PRIILDADITNS*NPEDLRKQSTL
Trigger: CAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTCCAACTGTTTGTAATATCAGCATCCAAGATGATACGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATCACAGTCCAAAGCATaGTGCTTCCCTCGTATCATC +
Preference number: 3 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLSQSKA*CFPRII
Trigger: GATGATACGAGGGAAGCACAATGCTTTGGACTGTGA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp CAAAGCATTGTGCTTCCCTCGTATCATCTTGGATGCTaGTATTACAAACAGTTGGAACCCAGAAGACTTAAG +
Preference number: 3 (lower is better)
Translates to: QSIVLPSYHLGC*YYKQLEPRRLK
Trigger: CTTAAGTCTTCTGGGTTCCAACTGTTTGTAATATCAGCATCCAAGATGATACGAGGGAAGCACAATGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATCAACTGTATTAGGTTaGGCAGCAAACACAAGGTCA +
Preference number: 3 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLSTVLG*AANTRS
Trigger: TGACCTTGTGTTTGCTGCCAAACCTAATACAGTTGA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATTCCCTGTGCCATGTCTaGCACTTACCTAAGAACTAT +
Preference number: 3 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDSLCHV*HLPKNY
Trigger: ATAGTTCTTAGGTAAGTGCAAGACATGGCACAGGGA...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp TGTGTGATTTTACTATTTCAACCAATCCATAGACCCTaGGGATTTGGCAGCAGAATTCAGGAGAAATGCTAC +
Preference number: 3 (lower is better)
Translates to: CVILLFQPIHRP*GFGSRIQEKCY
Trigger: GTAGCATTTCTCCTGAATTCTGCTGCCAAATCCTCAGGGTCTATGGATTGGTTGAAATAGTAAAATCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp AAAATGCACCTGTGGTTTCTGAACTTGGGTATACGCTaGTACATAAGGACTACCATAGAAGTTACATGCCTT +
Preference number: 3 (lower is better)
Translates to: KMHLWFLNLGIR*YIRTTIEVTCL
Trigger: AAGGCATGTAACTTCTATGGTAGTCCTTATGTATCAGCGTATACCCAAGTTCAGAAACCACAGGTGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATTAGAAGATGTTCACTaGGGGAGGAAATGTATTCCT +
Preference number: 3 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLEDVH*GRKCIP
Trigger: AGGAATACATTTCCTCCCCAAGTGAACATCTTCTAA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATAGTATGTCTTATCTATaGCATTCCTCTGGAGTGTTT +
Preference number: 3 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNSMSYL*HSSGVF
Trigger: AAACACTCCAGAGGAATGCAATAGATAAGACATACT...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGATAAAAGCAGAGAGATaGAATCAGACGAGACATACA +
Preference number: 3 (lower is better)
Translates to: FLNLKSQSKALCFPRIILIKAER*NQTRHT
Trigger: TGTATGTCTCGTCTGATTCAATCTCTCTGCTTTTAT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAGTTTATCTCTGGATCTaGATGAGTTTGTCAATGCCA +
Preference number: 3 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRVYLWI*MSLSMP
Trigger: TGGCATTGACAAACTCATCAAGATCCAGAGATAAAC...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATAGAGCAGAAACGTCTTaGGTTAATTCTTTCCTCTAC +
Preference number: 3 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDRAETS*VNSFLY
Trigger: GTAGAGGAAAGAATTAACCAAAGACGTTTCTGCTCT...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp ACCCACACTTTCTTTCTCTCCCTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGACTTTTCTTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: THTFFLSLNTKA*KIALVRLFFPL
Trigger: TAAAGGAAAGAAAAGTCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAGGGAGAGAAAGAAAGTGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR CCA 72 bp TGTACCTCCTACAGTTTTTCTAGCAGTGTTGGACAATaGATTCTAAAGGTTCCTGAGACTTTGTTAAATTTC +
Preference number: 3 (lower is better)
Translates to: CTSYSFSSSVGQ*ILKVPETLLNF
Trigger: GAAATTTAACAAAGTCTCAGGAACCTTTAGAATCCATTGTCCAACACTGCTAGAAAAACTGTAGGAGGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 72 bp TGTAAAATTATATCATCAGCAAATTCTATAGTCACATaGGCTCAAAGATCTGCCTCATCCAATCTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: CKIISSANSIVT*AQRSASSNLVP
Trigger: GGGAACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGATGATATAATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CCA 72 bp TCTAACTCATTGGTCTTGTTCAACAAGAAAGAATTCTaGTTTGTGGCTGAATCTGATTTAACAGCTGCCAAT +
Preference number: 3 (lower is better)
Translates to: SNSLVLFNKKEF*FVAESDLTAAN
Trigger: ATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATATAAAAGCAGAGAGATaGAATCAGACGAGACATACA +
Preference number: 3 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDIKAER*NQTRHT
Trigger: TGTATGTCTCGTCTGATTCAATCTCTCTGCTTTTAT...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR TCA 72 bp ATGAGGCACACAATAGAAAAGGAATTTCGCCATCTGTaGTCTCGAAATTACAAATGGAGAATGACAAAGAAT +
Preference number: 3 (lower is better)
Translates to: MRHTIEKEFRHL*SRNYKWRMTKN
Trigger: ATTCTTTGTCATTCTCCATTTGTAATTTCGAGATCACAGATGGCGAAATTCCTTTTCTATTGTGTGCCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR GCA 72 bp TTATTTCTAAATCTCAAATCACAGTCCAAAGCATTGTaGTTCCCTCGTATCATCTTGGATGCTGATATTACA +
Preference number: 3 (lower is better)
Translates to: LFLNLKSQSKAL*FPRIILDADIT
Trigger: TGTAATATCAGCATCCAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR GCA 72 bp GTTGCTTTAGATAAACAGCAAGTATGTCTTATCTATTaGATTCCTCTGGAGTGTTTGAAACTGGAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: VALDKQQVCLIY*IPLECLKLERN
Trigger: ATTTCTCTCCAGTTTCAAACACTCCAGAGGAATGCAATAGATAAGACATACTTGCTGTTTATCTAAAGCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCGGGACCGCCACTGCCTaGCCATCCCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASGTATA*PSPTAD
Trigger: GTCGGCGGTGGGGGATGGGCAGGCAGTGGCGGTCCC...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGGGACCGCCACTGCCTaGCCATCCCCCACCGCCGAC +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRGTATA*PSPTAD
Trigger: GTCGGCGGTGGGGGATGGGCAGGCAGTGGCGGTCCC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGATCTCCTCACCTCGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRDLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGAGGTGAGGAGATC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTGGTTTCCATTTAACCTaGGCCGTGGCGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTGFHLT*AVADAG
Trigger: CCCTGCGTCCGCCACGGCCCAGGTTAAATGGAAACC...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTCCAGGCCTCGTGGGTaGCTTTCCTGGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASSRPRG*LSWWWP
Trigger: CGGCCACCACCAGGAAAGCCACCCACGAGGCCTGGA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTCAGAGCCAGGGTACCTaGGAGGCATGGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTQSQGT*EAWSAS
Trigger: CGATGCTGACCATGCCTCCCAGGTACCCTGGCTCTG...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTCCAGGGCCGGCCGGCTaGGTAGTCCCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVPGPAG*VVPWGT
Trigger: GGTACCCCAGGGGACTACCCAGCCGGCCGGCCCTGG...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGATCCAGCCCTAGATGGTaGGGAACTAGACGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRSSPRW*GTRRAR
Trigger: CCTCGCACGTCTAGTTCCTCACCATCTAGGGCTGGA...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTTCAAGGAGAAGTAAGTaGGGCTCAAGCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTSRRSK*GSSPGH
Trigger: GTGGCCTGGGCTTGAGCCTCACTTACTTCTCCTTGA...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGGCGGGACCGCCACTaGCTGCCCATCCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILRRDRH*LPIPHR
Trigger: GCGGTGGGGGATGGGCAGGCAGTGGCGGTCCCGCCT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAGGGGTCCTTCTGCCTaGGCCTCCATTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTRGPSA*ASIRLV
Trigger: CACAAGTCTAATGGAGGCGCAGGCAGAAGGACCCCT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCCAGGGCCGGCCGGCTaGGTAGTCCCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILPGPAG*VVPWGT
Trigger: GGTACCCCAGGGGACTACCCAGCCGGCCGGCCCTGG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAAGCCGCTGCTCTTGTaGCAGCACCTGCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSKPLLL*QHLLPL
Trigger: GAGGGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTGCTGCTGTTACTGCTaGTGCCGGCTCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDCCCYC*CRLPQA
Trigger: GGCTTGGGGGAGCCGGCAGCAGCAGTAACAGCAGCA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATGCTGCTGCTGTTACTaGTGCTGCCGGCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRCCCCY*CCRLPQ
Trigger: TTGGGGGAGCCGGCAGCAGCAGTAACAGCAGCAGCA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGCTGCCACCACCATCTaGCTGCTCAGGGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFAATTI*LLRGVG
Trigger: GCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGGGCTGGGAGGTGACTTaGTTCTCCCCAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLGWEVT*FSPDVG
Trigger: CCCCACATCTGGGGAGAAGCAAGTCACCTCCCAGCC...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTGAACTTGTCAGTGTCTaGCTTTGGCTCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTELVSV*LWLQGQ
Trigger: CTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTC...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGAACTCCTCTGGTCATaGTGGGGCCGTCCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRELLWS*WGRPAL
Trigger: TAGGGCTGGACGGCCCCACCATGACCAGAGGAGTTC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGGGGACGAACTCCTCTaGTCATGGTGGGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFGDELL*SWWGRP
Trigger: TGGACGGCCCCACCATGACCAGAGGAGTTCGTCCCC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTGCTGAGTTTACTGGCTaGCTTACTCTTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTAEFTG*LTLPLG
Trigger: CCCCAAGGGAAGAGTAAGCCAGCCAGTAAACTCAGC...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCGTGCGAGGCAAGGATaGGCTTCGAGGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFRARQG*ASRRGT
Trigger: AGTGCCTCTCCTCGAAGCTCATCCTTGCCTCGCACG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATACTGCAGAGCCCGCTaGCCCGACCCGACGTTATTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSYCRAR*PDPTLF
Trigger: GAATAACGTCGGGTCGGGTCAGCGGGCTCTGCAGTA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAGGCGGGACCGCCACTaGCTGCCCATCCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYRRDRH*LPIPHR
Trigger: GCGGTGGGGGATGGGCAGGCAGTGGCGGTCCCGCCT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTGGAACGCAAGGCTTATaGAGCAGAGCAGGGAGAATA +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTGTQGL*SRAGRI
Trigger: TATTCTCCCTGCTCTGCTGCATAAGCCTTGCGTTCC...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGAGGCACTGGGACTCCTaGGAGGGACAACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLRHWDS*EGQLDS
Trigger: AGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAAGGCACTGGGACTCCTaGGAGGGACAACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRRHWDS*EGQLDS
Trigger: AGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGAGTGGTGGTGGAGGCTaGCGGATCCTTTCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLSGGGG*RILSGH
Trigger: ATGGCCTGAAAGGATCCGGCAGCCTCCACCACCACT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCCTCACCTCGTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDPHLVI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGAGGTGAGG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACTCCTCTGGTCATGGTaGGGCCGTCCAGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLLWSW*GRPALD
Trigger: ATCTAGGGCTGGACGGCCCCACCATGACCAGAGGAG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGAACTCCTCTGGTCATaGTGGGGCCGTCCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFELLWS*WGRPAL
Trigger: TAGGGCTGGACGGCCCCACCATGACCAGAGGAGTTC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACTGGCTGAGTGGTGGTaGAGGCTGCCGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLAEWW*RLPDPF
Trigger: GAAAGGATCCGGCAGCCTCCACCACCACTCAGCCAG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCTTTTCATCTTGAGGTaGTGCCTCCAGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGLFILR*CLQDLK
Trigger: CTTCAAGTCCTGGAGGCATCACCTCAAGATGAAAAG...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGATTTCCACCAGAAGCTTaGCTAGGTCTGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRFPPEA*LGLADR
Trigger: CCTATCAGCCAGACCTAGTCAAGCTTCTGGTGGAAA...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGATTTATCAGAGGCACTTaGGAGGTCGCCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRFIRGT*EVAKEG
Trigger: TCCTTCCTTGGCGACCTCTCAAGTGCCTCTGATAAA...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCGGGAGAAAAGGTCTaGGTCGGAGTTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRAGEKV*VGVTTP
Trigger: GGGAGTAGTAACTCCGACTCAGACCTTTTCTCCCGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCCAGCCCTAGATGGTaGGGAACTAGACGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSSPRW*GTRRAR
Trigger: CCTCGCACGTCTAGTTCCTCACCATCTAGGGCTGGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTAAGGGCAACTGTGACTaGCTAGGTAACCAGCTATTC +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTKGNCD*LGNQLF
Trigger: GAATAGCTGGTTACCTAGTCAGTCACAGTTGCCCTT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCAAAGTACCTCTCCCCTaGGGCAAAGTCCCGACACAT +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASKVPLP*GKVPTH
Trigger: ATGTGTCGGGACTTTGCCTCAGGGGAGAGGTACTTT...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAAGCCGCTGCTCTTGTaGCAGCACCTGCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVKPLLL*QHLLPL
Trigger: GAGGGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGCTCCCCCAAGCCGCTaGTCTTGTGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILAPPSR*SCASTC
Trigger: GCAGGTGCTGGCACAAGAGCAGCGGCTTGGGGGAGC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGTGTCCCTCGAAAACCTaGCACAGCTCGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLCPSKT*HSSRWS
Trigger: AGACCACCTCGAGCTGTGGCAGGTTTTCGAGGGACA...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCCACCACCATCTGCCTaGTCAGGGGTGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDPPPSA*SGVLAE
Trigger: TTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATGCTGCCACCACCATCTaGCTGCTCAGGGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNAATTI*LLRGVG
Trigger: GCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGC...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAAGGGGTCCTTCTGCCTaGGCCTCCATTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRRGPSA*ASIRLV
Trigger: CACAAGTCTAATGGAGGCGCAGGCAGAAGGACCCCT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTTGCTGGGTTTGCAATaGTCCTGTTGGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASLLGLQ*SCWQDL
Trigger: GAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGGCTGGGTAGTCCCCTaGGGTACCGTCCGCGTTTAC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVGWVVP*GTVRVY
Trigger: GTAAACGCGGACGGTACCCCAGGGGACTACCCAGCC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSNVPRD*LRRRSA
Trigger: GGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATGCCACAGCTCGAGGTaGTCTGACGTCACCACAGGA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSCHSSR*SDVTTG
Trigger: TCCTGTGGTGACGTCAGACCACCTCGAGCTGTGGCA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACAAACATCCTTCTCCTaGGGACGGGGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSQTSFS*GRGCPR
Trigger: TCTGGGACACCCCCGTCCCCAGGAGAAGGATGTTTG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGGGTGGCTTTCCTGGTaGTGGCCGAGGAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSGWLSW*WPRKEL
Trigger: CAGTTCTTTCCTCGGCCACCACCAGGAAAGCCACCC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCGTGGGTGGCTTTCCTaGTGGTGGCCGAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDRGWLS*WWPRKE
Trigger: TTCTTTCCTCGGCCACCACCAGGAAAGCCACCCACG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTAGTGCTGGCTGAGTaGTGGTGGAGGCTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFLVLAE*WWRLPD
Trigger: ATCCGGCAGCCTCCACCACCACTCAGCCAGCACTAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
3UTR CAA 72 bp CGCTTCCAGCTGAAGAGGAGGCAGAAAACCGTTACATaGCACAGGGCCATGAAAGGAAAGGCTTCACTACTT +
Preference number: 4 (lower is better)
Translates to: RFQLKRRQKTVT*HRAMKGKASLL
Trigger: AAGTAGTGAAGCCTTTCCTTTCATGGCCCTGTGCAATGTAACGGTTTTCTGCCTCCTCTTCAGCTGGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGCGGACACGAATTGGTaGCCCAAGGCTTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSADTNW*PKAWSI
Trigger: AATGCTCCAAGCCTTGGGTCACCAATTCGTGTCCGC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGATGCCTCCAGGACTTaGAGTACTTCAGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRDASRT*STSGSS
Trigger: TGAGGAGCCTGAAGTACTTCAAGTCCTGGAGGCATC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGTCGCTGCAATAAACTaGCTAGCAGCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFVAAIN*LAAPGW
Trigger: CCAGCCTGGAGCTGCTAGTCAGTTTATTGCAGCGAC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCCACTTGGCCTATCTaGCCTTCAACATGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRATWPI*PSTCGS
Trigger: TGACCCACATGTTGAAGGTCAGATAGGCCAAGTGGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGGTGTTTTTGGATTGTaGGGAGATCCTGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRGVFGL*GDPGLL
Trigger: CAAGAGTCCAGGATCTCCTCACAATCCAAAAACACC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTCGTGCGAGGCAAGGATaGGCTTCGAGGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVRARQG*ASRRGT
Trigger: AGTGCCTCTCCTCGAAGCTCATCCTTGCCTCGCACG...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACAGAGTTCCACTGGGTaGGGACAGGGAAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSQSSTG*GQGSRM
Trigger: CATCCTACTTCCCTGTCCTCACCCAGTGGAACTCTG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGGGATTTCTCAGAATTaGGGTGTGCAGCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRGISQN*GVQHPD
Trigger: ATCTGGATGCTGCACACCTCAATTCTGAGAAATCCC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCTGTCCTTGGTTGCCTaGGCAAAATTGTATAAAGGG +
Preference number: 4 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGLSLVA*AKLYKG
Trigger: CCCTTTATACAATTTTGCTCAGGCAACCAAGGACAG...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGCTACGGCGAAGATCTaGCAGATTCCGACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFATAKI*QIPTLQ
Trigger: TTGCAGGGTCGGAATCTGGCAGATCTTCGCCGTAGC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAATTGGCAATTCCAATTaGAGCAGGGGTCAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRIGNSN*SRGQAS
Trigger: ACTCGCTTGACCCCTGCTGCAATTGGAATTGCCAAT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGTACAGGGACACACATaGATCAGGTTTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRVQGHT*IRFRRK
Trigger: CTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTAC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATCGCCCAGGCTGGAGTaGAGTGGGGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLSPRLE*SGAILA
Trigger: AGCCAAGATCGCCCCACTGCACTCCAGCCTGGGCGA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGACTAGCAGCTCCAGGCTaGAGTTCCAGCCTATCTGTA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRLAAPG*SSSLSV
Trigger: TACAGATAGGCTGGAACTCCAGCCTGGAGCTGCTAG...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAAGTAAAGTTCCACAGTaGGCTCCATGGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRSKVPQ*APWAED
Trigger: ATCTTCAGCCCATGGAGCCCACTGTGGAACTTTACT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGGGGACGAACTCCTCTaGTCATGGTGGGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILGDELL*SWWGRP
Trigger: TGGACGGCCCCACCATGACCAGAGGAGTTCGTCCCC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTGCAATGCTCCTGTTaGCAGGACCTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLQCSC*QDLLEE
Trigger: CTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGTGCTGGCTGAGTGGTaGTGGAGGCTGCCGGATCCT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILVLAEW*WRLPDP
Trigger: AGGATCCGGCAGCCTCCACCACCACTCAGCCAGCAC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCTGAGTTTACTGGCTaGCTTACTCTTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRAEFTG*LTLPLG
Trigger: CCCCAAGGGAAGAGTAAGCCAGCCAGTAAACTCAGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACAAGGCTTGGAGCATTaGGAAGACCATTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSQGLEH*EDHLPG
Trigger: GCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAAAAGCTATCTTCAGCTaGCCTACTCAGGTGAGAATC +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRKAIFS*PTQVRI
Trigger: GATTCTCACCTGAGTAGGTCAGCTGAAGATAGCTTT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGACTGGGAGATGATGGGTaGCAGAAAGCTATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRLGDDG*QKAIFS
Trigger: GCTGAAGATAGCTTTCTGTCACCCATCATCTCCCAG...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGGGCATCTTCTATCTTaGAGGCTATTAACCCACACT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRGHLLS*RLLTHT
Trigger: AGTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGCTCCCCCAAGCCGCTaGTCTTGTGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYAPPSR*SCASTC
Trigger: GCAGGTGCTGGCACAAGAGCAGCGGCTTGGGGGAGC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCCACCACCATCTGCCTaGTCAGGGGTGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSPPPSA*SGVLAE
Trigger: TTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTGCTGGGTTTGCAATaGTCCTGTTGGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLLGLQ*SCWQDL
Trigger: GAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCCTTTCAGGCCATTCTTaGTGGGTTTGCAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASLSGHS*WVCNAP
Trigger: AGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAG...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCACCTTTCAAAGAGATaGAGCCTGGCTCCTATCTGC +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLHLSKR*SLAPIC
Trigger: GCAGATAGGAGCCAGGCTGCATCTCTTTGAAAGGTG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTGTGTCACAGGTGCTTaGTCAGGGCTGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDCVTGA*SGLPTS
Trigger: AGAAGTTGGCAGCCCTGAGCAAGCACCTGTGACACA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATTCCCTGTGTCACAGGTaGTTGCTCAGGGCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNSLCHR*LLRAAN
Trigger: GTTGGCAGCCCTGAGCAAGCACCTGTGACACAGGGA...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGGACGCAGGGGTTTCTaGAGGAGGGCTCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLGRRGF*RRALVQ
Trigger: CTGGACCAGAGCCCTCCTCCAGAAACCCCTGCGTCC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTTGCCACAGCTCGAGGTaGTCTGACGTCACCACAGGA +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVCHSSR*SDVTTG
Trigger: TCCTGTGGTGACGTCAGACCACCTCGAGCTGTGGCA...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCAAACATCCTTCTCCTaGGGACGGGGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSQTSFS*GRGCPR
Trigger: TCTGGGACACCCCCGTCCCCAGGAGAAGGATGTTTG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTT +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDVSVWL*LQGQTF
Trigger: AAACGTCTGACCCTGGAGCCAAAGCCAGACACTGAC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGAACTTGTCAGTGTCTaGCTTTGGCTCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSELVSV*LWLQGQ
Trigger: CTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCTAGCAGCTCCAGGCTaGAGTTCCAGCCTATCTGTA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFLAAPG*SSSLSV
Trigger: TACAGATAGGCTGGAACTCCAGCCTGGAGCTGCTAG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATGGCTTTCCTGGTGGTaGCCGAGGAAAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSWLSWW*PRKELR
Trigger: TCTCAGTTCTTTCCTCGGCCACCACCAGGAAAGCCA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTCCAGGCCTCGTGGGTaGCTTTCCTGGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYSRPRG*LSWWWP
Trigger: CGGCCACCACCAGGAAAGCCACCCACGAGGCCTGGA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTACTCCAGGCCTCGTaGGTGGCTTTCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLLQAS*VAFLVV
Trigger: CACCACCAGGAAAGCCACCCACGAGGCCTGGAGTAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATTTCGAGGAGAGGCACTaGGACTCCTGCGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNFEERH*DSCEGQ
Trigger: TTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAA...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACTCCTCTGGTCATGGTaGGGCCGTCCAGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLLWSW*GRPALD
Trigger: ATCTAGGGCTGGACGGCCCCACCATGACCAGAGGAG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGAGGAAGATCCTGAGTaGCTGGGAGGTGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDEEDPE*LGGDLL
Trigger: AAGCAAGTCACCTCCCAGCCACTCAGGATCTTCCTC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTGGCTGAGTGGTGGTaGAGGCTGCCGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLAEWW*RLPDPF
Trigger: GAAAGGATCCGGCAGCCTCCACCACCACTCAGCCAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGGCTTACTCTTCCCTTaGGGGGTTTTAGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFGLLFP*GVLVLA
Trigger: AGCCAGCACTAAAACCCCCCAAGGGAAGAGTAAGCC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCCAAAGAGATGCAGCCTaGCTCCTATCTGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASQRDAA*LLSAEF
Trigger: AAACTCAGCAGATAGGAGCCAGGCTGCATCTCTTTG...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGGTACCTGGGAGGCATaGTCAGCATCGCCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSGTWEA*SASPVY
Trigger: GTACACTGGCGATGCTGACCATGCCTCCCAGGTACC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTGTCAAAGCCCCAAGTaGGCCAGTGTTACCTTTATC +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASCQSPK*ASVTFI
Trigger: GATAAAGGTAACACTGGCCCACTTGGGGCTTTGACA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCAGCTCGAGGTGGTCTaGCGTCACCACAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILQLEVV*RHHRNW
Trigger: CCAATTCCTGTGGTGACGTCAGACCACCTCGAGCTG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACCGATGTGCGTTGATTaGTGCATAACGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSPMCVD*CITNCP
Trigger: GGGACAGTTCGTTATGCATCAATCAACGCACATCGG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTGGAGCTTTTCATCTTaGGGTGATGCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDWSFSS*GDASRT
Trigger: AGTCCTGGAGGCATCACCTCAAGATGAAAAGCTCCA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCATCTACTGTCAGTCTTaGAAAGGGAGTGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASIYCQS*KGSEHF
Trigger: GAAGTGCTCACTCCCTTTTCAAGACTGACAGTAGAT...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCTGACCTACTCAGGTaGGAATCTACTGTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRADLLR*ESTVSL
Trigger: AAGACTGACAGTAGATTCTCACCTGAGTAGGTCAGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAATCTGTGTTGACCCATaGAACTGGCCTTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRICVDP*NWPWNF
Trigger: AAAATTCCAAGGCCAGTTTCATGGGTCAACACAGAT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGGCCGAGGAAAGAACTaGGACGAAGTTGAGCTATTG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSGRGKN*DEVELL
Trigger: CAATAGCTCAACTTCGTCTCAGTTCTTTCCTCGGCC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGCGGGAGAAAAGGTCTaGGTCGGAGTTACTACTCCC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSAGEKV*VGVTTP
Trigger: GGGAGTAGTAACTCCGACTCAGACCTTTTCTCCCGC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACCTGGACTCTTGCACTaGGTAGTGCTCCGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLPGLLH*VVLRGF
Trigger: GAAACCCCGGAGCACTACTCAGTGCAAGAGTCCAGG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGGAATTTCGCCATCTGTaGTCTCGAAATTACAAATGG +
Preference number: 4 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGEFRHL*SRNYKW
Trigger: CCATTTGTAATTTCGAGATCACAGATGGCGAAATTC...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCCAATCCATAGACCCTaGGGATTTGGCAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLPIHRP*GFGSRI
Trigger: AATTCTGCTGCCAAATCCTCAGGGTCTATGGATTGG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCATTGCACAGGGCCATaGAAGGAAAGGCTTCACTAC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDHCTGP*KERLHY
Trigger: GTAGTGAAGCCTTTCCTTTCATGGCCCTGTGCAATG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGCTACGGCGAAGATCTaGCAGATTCCGACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVATAKI*QIPTLQ
Trigger: TTGCAGGGTCGGAATCTGGCAGATCTTCGCCGTAGC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTACTTGTGGGCGTCGCTaGAATAAACTGACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFTCGRR*NKLTSS
Trigger: GCTGCTAGTCAGTTTATTGCAGCGACGCCCACAAGT...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAACTTGTGGGCGTCGCTaGAATAAACTGACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSTCGRR*NKLTSS
Trigger: GCTGCTAGTCAGTTTATTGCAGCGACGCCCACAAGT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACACCTTTCAAAGAGATaGAGCCTGGCTCCTATCTGC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSHLSKR*SLAPIC
Trigger: GCAGATAGGAGCCAGGCTGCATCTCTTTGAAAGGTG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGCTGGGTAGTCCCCTaGGGTACCGTCCGCGTTTAC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGWVVP*GTVRVY
Trigger: GTAAACGCGGACGGTACCCCAGGGGACTACCCAGCC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCCAGTTCCCAAGGGTaGTTTCCATTTAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSSSQG*FPFNLG
Trigger: GCCCAGGTTAAATGGAAACCACCCTTGGGAACTGGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLNVPRD*LRRRSA
Trigger: GGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATT...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGAAGACCATTTGCCTaGCCATGGCTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSRRPFA*PWLFSS
Trigger: AGAGGAGAACAGCCATGGCCAGGCAAATGGTCTTCT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCCACAGTGGGCTCCATaGGCTGAAGATCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFPQWAP*AEDLSS
Trigger: AGAAGAAAGATCTTCAGCCCATGGAGCCCACTGTGG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCGTGGGTGGCTTTCCTaGTGGTGGCCGAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILRGWLS*WWPRKE
Trigger: TTCTTTCCTCGGCCACCACCAGGAAAGCCACCCACG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACTACTCCAGGCCTCGTaGGTGGCTTTCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRLLQAS*VAFLVV
Trigger: CACCACCAGGAAAGCCACCCACGAGGCCTGGAGTAG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGTTGGCAGGACCTCCTaGAGGAGGAAGATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVVGRTS*RRKILS
Trigger: ACTCAGGATCTTCCTCCTCCAGGAGGTCCTGCCAAC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTTGCAATGCTCCTGTTaGCAGGACCTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLQCSC*QDLLEE
Trigger: CTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGTGCTGGCTGAGTGGTaGTGGAGGCTGCCGGATCCT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYVLAEW*WRLPDP
Trigger: AGGATCCGGCAGCCTCCACCACCACTCAGCCAGCAC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATTAGTGCTGGCTGAGTaGTGGTGGAGGCTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLVLAE*WWRLPD
Trigger: ATCCGGCAGCCTCCACCACCACTCAGCCAGCACTAA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCATAAAGGGAGCTGCTTaGAGGGGAAAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASIKGAA*RGKEHN
Trigger: ATTGTGTTCCTTTCCCCTCCAAGCAGCTCCCTTTAT...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp TCTCTGAAGATACTGAAGAACCTCAAGTTCCCTACATaGCTAGGAGCCAAGGGAAGGAGACACTGTACACCT +
Preference number: 4 (lower is better)
Translates to: SLKILKNLKFPT*LGAKGRRHCTP
Trigger: AGGTGTACAGTGTCTCCTTCCCTTGGCTCCTAGCAATGTAGGGAACTTGAGGTTCTTCAGTATCTTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAATATCTCTGTCTGGCTaGGTAATCTCTGAGCGGACA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSISLSG*VISERT
Trigger: TGTCCGCTCAGAGATTACTCAGCCAGACAGAGATAT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGATGCCTCCAGGACTTaGAGTACTTCAGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVDASRT*STSGSS
Trigger: TGAGGAGCCTGAAGTACTTCAAGTCCTGGAGGCATC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCTTTTCATCTTGAGGTaGTGCCTCCAGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFLFILR*CLQDLK
Trigger: CTTCAAGTCCTGGAGGCATCACCTCAAGATGAAAAG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGCCACTTGGCCTATCTaGCCTTCAACATGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSATWPI*PSTCGS
Trigger: TGACCCACATGTTGAAGGTCAGATAGGCCAAGTGGC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCTCTAGTTACAAAGGATaGCCTAACCATATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASSSYKG*PNHILP
Trigger: CGGAAGGATATGGTTAGGTCATCCTTTGTAACTAGA...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGCTGACCTACTCAGGTaGGAATCTACTGTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDADLLR*ESTVSL
Trigger: AAGACTGACAGTAGATTCTCACCTGAGTAGGTCAGC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGTTTTAGTGCTGGCTaGGTGGTGGTGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGFSAG*VVVEAA
Trigger: GGCAGCCTCCACCACCACTCAGCCAGCACTAAAACC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTCTGGCTCCTATCTGCTaGGTTTACTGGCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVLAPIC*VYWLAY
Trigger: GTAAGCCAGCCAGTAAACTCAGCAGATAGGAGCCAG...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCAAGCCAAATATACATaGATACTGGCTCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLQAKYT*ILAPWQ
Trigger: TTGCCAGGGAGCCAGTATTCATGTATATTTGGCTTG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGACTCACTAAATCATTCTaGATTCTGGATCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRLTKSF*ILDPAS
Trigger: AGAAGCAGGATCCAGAATTCAGAATGATTTAGTGAG...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTACTAACGCTTCCAGCTaGAGAGGAGGCAGAAAACCG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSTNASS*RGGRKP
Trigger: CGGTTTTCTGCCTCCTCTTCAGCTGGAAGCGTTAGT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTGCTGCTGCTGTTACTaGTGCTGCCGGCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYCCCCY*CCRLPQ
Trigger: TTGGGGGAGCCGGCAGCAGCAGTAACAGCAGCAGCA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGCTGGGAGGTGACTTaGTTCTCCCCAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGWEVT*FSPDVG
Trigger: CCCCACATCTGGGGAGAAGCAAGTCACCTCCCAGCC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGACAGTCCAAAGCATTGTaGTTCCCTCGTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRQSKAL*FPRIIL
Trigger: CAAGATGATACGAGGGAAGCACAATGCTTTGGACTG...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATCAGATGTGGTGAAATaGTGGGCATTGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRSDVVK*WALIPQ
Trigger: CTGAGGAATCAATGCCCAGCATTTCACCACATCTGA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGTTTCCATTTAACCTaGGCCGTGGCGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGFHLT*AVADAG
Trigger: CCCTGCGTCCGCCACGGCCCAGGTTAAATGGAAACC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTAAAGTTCCACAGTaGGCTCCATGGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSKVPQ*APWAED
Trigger: ATCTTCAGCCCATGGAGCCCACTGTGGAACTTTACT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAGGGTGGCTTTCCTGGTaGTGGCCGAGGAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRGWLSW*WPRKEL
Trigger: CAGTTCTTTCCTCGGCCACCACCAGGAAAGCCACCC...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTATATCTGCGTAGCCTaGCTTCTACTCCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSYICVA*LLLQAS
Trigger: CGAGGCCTGGAGTAGAAGCCAGGCTACGCAGATATA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACTTGGGTGGTGTTTTTaGATTGTGAGGAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLGWCF*IVRRSW
Trigger: CCAGGATCTCCTCACAATCCAAAAACACCACCCAAG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAAACTGGACTCTTGGGTaGTGTTTTTGGATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRNWTLG*CFWIVR
Trigger: CCTCACAATCCAAAAACACCACCCAAGAGTCCAGTT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGAGGAAGATCCTGAGTaGCTGGGAGGTGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSEEDPE*LGGDLL
Trigger: AAGCAAGTCACCTCCCAGCCACTCAGGATCTTCCTC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGTTGGCAGGACCTCCTaGAGGAGGAAGATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILVGRTS*RRKILS
Trigger: ACTCAGGATCTTCCTCCTCCAGGAGGTCCTGCCAAC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCAGGCCATTCTTGCTaGGTTTGCAATGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSGHSC*VCNAPV
Trigger: AACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGTGGACTGTTTATCTCTaGATCTTGATGAGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGWTVYL*ILMSLS
Trigger: TGACAAACTCATCAAGATCCAGAGATAAACAGTCCA...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTCTAAAAATGCACCTGTaGTTTCTGAACTTGGGTATA +
Preference number: 4 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTLKMHL*FLNLGI
Trigger: TATACCCAAGTTCAGAAACCACAGGTGCATTTTTAG...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGGGCTTTCCCCTTCCTaGGTAGCTCCCTATAAGTCA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSGLSPS*VAPYKS
Trigger: TGACTTATAGGGAGCTACCCAGGAAGGGGAAAGCCC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCTTTGTCACCTCAGTaGACTACTTTGGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRALSPQ*TTLADE
Trigger: TTCATCAGCCAAAGTAGTCCACTGAGGTGACAAAGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAACTTTTATGTACAGGTaGCCTATACAAAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRTFMYR*PIQKHS
Trigger: GGAGTGCTTTTGTATAGGCCACCTGTACATAAAAGT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTTTGGTTGTTGAGCTaGTTCCACCTTCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSFWLLS*FHLQCN
Trigger: GTTGCACTGAAGGTGGAATCAGCTCAACAACCAAAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTTTGGTTGTTGAGCTaGTTCCACCTTCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFFWLLS*FHLQCN
Trigger: GTTGCACTGAAGGTGGAATCAGCTCAACAACCAAAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCAGCTCGAGGTGGTCTaGCGTCACCACAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYQLEVV*RHHRNW
Trigger: CCAATTCCTGTGGTGACGTCAGACCACCTCGAGCTG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGGAGATGTTTCAACATaGGCCTGTGGTCATATCTCT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFGDVST*ACGHIS
Trigger: AGAGATATGACCACAGGCTCATGTTGAAACATCTCC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGGTCTAGAAAGATGCTaGATTCTGGAGGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSGLERC*ILEGDV
Trigger: AACATCTCCCTCCAGAATTCAGCATCTTTCTAGACC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAGGCAATTTATCTGGTaGCACACCAACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSRQFIW*HTNRDA
Trigger: GGCATCCCTGTTGGTGTGTCACCAGATAAATTGCCT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAATCTACTGTCAGTCTTaGAAAGGGAGTGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSIYCQS*KGSEHF
Trigger: GAAGTGCTCACTCCCTTTTCAAGACTGACAGTAGAT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTGGGAGATGATGGGTaGCAGAAAGCTATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLGDDG*QKAIFS
Trigger: GCTGAAGATAGCTTTCTGTCACCCATCATCTCCCAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAATCTGTGTTGACCCATaGAACTGGCCTTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRICVDP*NWPWNF
Trigger: AAAATTCCAAGGCCAGTTTCATGGGTCAACACAGAT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGTTGAGCTATTGACCTaGTCTGTGTTGACCCATGAA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSVELLT*SVLTHE
Trigger: TTCATGGGTCAACACAGATCAGGTCAATAGCTCAAC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCCTGGACTCTTGCACTaGGTAGTGCTCCGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYPGLLH*VVLRGF
Trigger: GAAACCCCGGAGCACTACTCAGTGCAAGAGTCCAGG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAGCCAAATATACATaGATACTGGCTCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFQAKYT*ILAPWQ
Trigger: TTGCCAGGGAGCCAGTATTCATGTATATTTGGCTTG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAGCAGACAATCACAACTaGATTAGAAGACGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRADNHN*IRRRLN
Trigger: ATTAAGACGTCTTCTAATTCAGTTGTGATTGTCTGC...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACTCAGGATATCCAGCTaGTCTCCTCCCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLRISS*SPPPLI
Trigger: AATGAGTGGGGGAGGAGAGCAGCTGGATATCCTGAG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTCAGGATATCCAGCTaGTCTCCTCCCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLRISS*SPPPLI
Trigger: AATGAGTGGGGGAGGAGAGCAGCTGGATATCCTGAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGGAACGCAAGGCTTATaGAGCAGAGCAGGGAGAATA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSGTQGL*SRAGRI
Trigger: TATTCTCCCTGCTCTGCTGCATAAGCCTTGCGTTCC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAGTGGTGGTGGAGGCTaGCGGATCCTTTCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYSGGGG*RILSGH
Trigger: ATGGCCTGAAAGGATCCGGCAGCCTCCACCACCACT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILFKRFS*LSLLSI
Trigger: GATGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCATATCCTTCCGGGTTaGGGCACCATGTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSHILPG*GTMFIL
Trigger: GAGAATGAACATGGTGCCCCAACCCGGAAGGATATG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTGCTCTTTCTAGACTaGGAGATGATGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLLFLD*EMMGDR
Trigger: TCTGTCACCCATCATCTCCCAGTCTAGAAAGAGCAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAATTGTGAGGAGATCCTaGACTCTTGCACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSIVRRS*TLALSS
Trigger: ACTACTCAGTGCAAGAGTCCAGGATCTCCTCACAAT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGGACAACTGGACTCTTaGGTGGTGTTTTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFGQLDS*VVFLDC
Trigger: ACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTCGAGGAGAGGCACTaGGACTCCTGCGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYFEERH*DSCEGQ
Trigger: TTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAGGCTTACTCTTCCCTTaGGGGGTTTTAGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLGLLFP*GVLVLA
Trigger: AGCCAGCACTAAAACCCCCCAAGGGAAGAGTAAGCC...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGATCCCTCGTATCATCTTaGATGCTGATATTACAAACA +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRSLVSS*MLILQT
Trigger: TGTTTGTAATATCAGCATCCAAGATGATACGAGGGA...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAAATCATTCTGAATTCTaGATCCTGCTTCTCGTATCA +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRNHSEF*ILLLVS
Trigger: TGATACGAGAAGCAGGATCCAGAATTCAGAATGATT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp GTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAATaGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGG +
Preference number: 4 (lower is better)
Translates to: VIIPSSVRDFSE*RCAASRFPFMW
Trigger: CCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAATCCCTGACTGAACTTGGAATTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTACTTGTTTTGGTTGTTaGGCTGATTCCACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFTCFGC*ADSTFS
Trigger: ACTGAAGGTGGAATCAGCTCAACAACCAAAACAAGT...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCCGATGTGCGTTGATTaGTGCATAACGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILPMCVD*CITNCP
Trigger: GGGACAGTTCGTTATGCATCAATCAACGCACATCGG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACAAGGCTTGGAGCATTaGGAAGACCATTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLQGLEH*EDHLPG
Trigger: GCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGCGGACACGAATTGGTaGCCCAAGGCTTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYADTNW*PKAWSI
Trigger: AATGCTCCAAGCCTTGGGTCACCAATTCGTGTCCGC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATTCCAGCTCAAAGCTGTaGATGGAACGTAACTTTCGC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNSSSKL*MERNFR
Trigger: GCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGA...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTTTTGTCCTAAAATCCTaGAGGTCCTGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVFVLKS*RSCSLS
Trigger: GGACAAGGAGCAGGACCTTCAGGATTTTAGGACAAA...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATTTGGTCCCAGGTCTTaGGATTTGTTACTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRFGPRS*DLLLSL
Trigger: TAGAGAAAGTAACAAATCTCAAGACCTGGGACCAAA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTCAGTAGTAGCTGAGTaGTCCTTTTCCACAATTACC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDSVVAE*SFSTIT
Trigger: GGTAATTGTGGAAAAGGATCACTCAGCTACTACTGA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCAGTAGTAGCTGAGTaGTCCTTTTCCACAATTACC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSVVAE*SFSTIT
Trigger: GGTAATTGTGGAAAAGGATCACTCAGCTACTACTGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGGTTCAGTAGTAGCTaGGTGATCCTTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSRFSSS*VILFHN
Trigger: ATTGTGGAAAAGGATCACTCAGCTACTACTGAACCT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATCTGGAAGAAATTTCTaGAGTTCCAACTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRSGRNF*SSNCQK
Trigger: CTTCTGACAGTTGGAACTTCAGAAATTTCTTCCAGA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAGGCCGAGGAAAGAACTaGGACGAAGTTGAGCTATTG +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLGRGKN*DEVELL
Trigger: CAATAGCTCAACTTCGTCTCAGTTCTTTCCTCGGCC...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATTCCCGCCATATGGGCTaGTGGTTGGAACTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDSRHMG*WLELPL
Trigger: TAAAGGCAGTTCCAACCATCAGCCCATATGGCGGGA...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTGTGGAAATTCAAGGTaGCCTGATCTTGTCACATAC +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFCGNSR*PDLVTY
Trigger: GTATGTGACAAGATCAGGTCACCTTGAATTTCCACA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCCCCTTGTAGGCGAGTaGAGAATGCCCACACAGAGT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYPLVGE*RMPTQS
Trigger: ACTCTGTGTGGGCATTCTTCACTCGCCTACAAGGGG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATACTTCCGGGTCACCCTaGTGGACATCTGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYTSGSP*WTSGSL
Trigger: CAGACTACCAGATGTCCATCAGGGTGACCCGGAAGT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTGTCCCTCGAAAACCTaGCACAGCTCGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYCPSKT*HSSRWS
Trigger: AGACCACCTCGAGCTGTGGCAGGTTTTCGAGGGACA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATATTGAGAAGACCATTTaGCTGGCCATGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNIEKTI*LAMAVL
Trigger: GAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAAT...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTTTCAGGCCATTCTTaGTGGGTTTGCAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLSGHS*WVCNAP
Trigger: AGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGTACAGGGACACACATaGATCAGGTTTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSVQGHT*IRFRRK
Trigger: CTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTAC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATGTGCTTGCTCAGGGCTaGCAACTTCTATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNVLAQG*QLLFFT
Trigger: GGTGAAAAATAGAAGTTGGCAGCCCTGAGCAAGCAC...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCTGAATTCTGGATCCTaGTTCTCGTATCACCAATTC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDLNSGS*FSYHQF
Trigger: GAATTGGTGATACGAGAAGCAGGATCCAGAATTCAG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGAAAAATTTCTGTGAGCTaGTCTAGAAAACTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRKISVS*SRKLKD
Trigger: GTCCTTTAGTTTTCTAGAGCAGCTCACAGAAATTTT...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTCCAGTTCCCAAGGGTaGTTTCCATTTAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILSSSQG*FPFNLG
Trigger: GCCCAGGTTAAATGGAAACCACCCTTGGGAACTGGA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATAAGATCTTTCTTCTCTaGCTGCTGACCACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDKIFLL*LLTTVK
Trigger: TTTCACTGTGGTCAGCAGCCAGAGAAGAAAGATCTT...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAAGATCTTTCTTCTCTaGCTGCTGACCACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSKIFLL*LLTTVK
Trigger: TTTCACTGTGGTCAGCAGCCAGAGAAGAAAGATCTT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCCACAGTGGGCTCCATaGGCTGAAGATCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILPQWAP*AEDLSS
Trigger: AGAAGAAAGATCTTCAGCCCATGGAGCCCACTGTGG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGATGGCTTTCCTGGTGGTaGCCGAGGAAAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRWLSWW*PRKELR
Trigger: TCTCAGTTCTTTCCTCGGCCACCACCAGGAAAGCCA...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTTGGGTGGTGTTTTTaGATTGTGAGGAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLGWCF*IVRRSW
Trigger: CCAGGATCTCCTCACAATCCAAAAACACCACCCAAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTGTTCCGATGTGCGTTaGTTGATGCATAACGAACTG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSCSDVR*LMHNEL
Trigger: CAGTTCGTTATGCATCAATCAACGCACATCGGAACA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTACTCCAAAAGTCTTaGTGCTATTGTCAAACACGG +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFLLQKS*CYCQTR
Trigger: CCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATTTTGGTCCCAGGTCTTaGGATTTGTTACTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDFGPRS*DLLLSL
Trigger: TAGAGAAAGTAACAAATCTCAAGACCTGGGACCAAA...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGACAACCAGTCTATTATaGTCAGGAAGTTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLTTSLL*SGSSFG
Trigger: ACCAAAAGAACTTCCTGATCATAATAGACTGGTTGT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGTCTTGAAAAGGGAGTaGGCACTTCCTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILVLKRE*ALPPHK
Trigger: TTTGTGAGGAGGAAGTGCTCACTCCCTTTTCAAGAC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGGTGTTTTTGGATTGTaGGGAGATCCTGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILGVFGL*GDPGLL
Trigger: CAAGAGTCCAGGATCTCCTCACAATCCAAAAACACC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCTGGCTCCTATCTGCTaGGTTTACTGGCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLAPIC*VYWLAY
Trigger: GTAAGCCAGCCAGTAAACTCAGCAGATAGGAGCCAG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGAACATGACAAATCTCTaGACCAGTATTACAAGCATG +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLNMTNL*TSITSM
Trigger: CATGCTTGTAATACTGGTTCAGAGATTTGTCATGTT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGTATGTCACTGAAACCTaGAATATGCCATCACTAAGA +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLYVTET*NMPSLR
Trigger: TCTTAGTGATGGCATATTTCAGGTTTCAGTGACATA...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAACTTGGGTATACGCTaGTACATAAGGACTACCATA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSNLGIR*YIRTTI
Trigger: TATGGTAGTCCTTATGTATCAGCGTATACCCAAGTT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATTGGAATCAATTTCTTaGTTGCAAGAGCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRLESIS*LQELRL
Trigger: TAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGAGATCTCAATACAATaGTGCCCTCTACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDEISIQ*CPLLNF
Trigger: GAAGTTAAGTAGAGGGCAGCATTGTATTGAGATCTC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATCTAGGACTTTATATCTaGGTAGCCTGGCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNLGLYI*VAWLLL
Trigger: GAGTAGAAGCCAGGCTACGCAGATATAAAGTCCTAG...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTAGGACTTTATATCTaGGTAGCCTGGCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLGLYI*VAWLLL
Trigger: GAGTAGAAGCCAGGCTACGCAGATATAAAGTCCTAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACATTCTTGCTGGGTTTaGAATGCTCCTGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRHSCWV*NAPVGR
Trigger: CCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCCATGTTACTTTCTTTTaGAAGAGAAGATCAACACTG +
Preference number: 4 (lower is better)
Translates to: VSIASVHIFCAHTTTNASHVTFF*KRRSTL
Trigger: CAGTGTTGATCTTCTCTTGCAAAAGAAAGTAACATG...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCAGTCCAAAGCATTGTaGTTCCCTCGTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSQSKAL*FPRIIL
Trigger: CAAGATGATACGAGGGAAGCACAATGCTTTGGACTG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAACGCCTCTACGCTGTaGAAGAAATCACTATGTGTG +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVNASTL*KKSLCV
Trigger: CACACATAGTGATTTCTTGCACAGCGTAGAGGCGTT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATATGGGCTCAAAGATCTaGCTCATCCAATCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNMGSKI*LIQSCS
Trigger: GGAACAAGATTGGATGAGGCAGATCTTTGAGCCCAT...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGCACTCCATGTTTCTaGCGATACTCTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILSTPCF*RYSVLG
Trigger: ACCAAGGACAGAGTATCGGCAGAAACATGGAGTGCT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATAGAAGACCATTTGCCTaGCCATGGCTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDRRPFA*PWLFSS
Trigger: AGAGGAGAACAGCCATGGCCAGGCAAATGGTCTTCT...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATGCTCAAAGCTGTGAATaGAACGTAACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNAQSCE*NVTFAP
Trigger: TGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGC...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGCTCAAAGCTGTGAATaGAACGTAACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSAQSCE*NVTFAP
Trigger: TGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYVSVWL*LQGQTF
Trigger: AAACGTCTGACCCTGGAGCCAAAGCCAGACACTGAC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTAGAGAAGTTTTCCCTTaGAGAGTAAAGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFREVFP*RVKFHS
Trigger: ACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCT...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAATCAGGAAGTTCTTTTaGTCCCAGGTCTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSIRKFF*SQVLRF
Trigger: AAATCTCAAGACCTGGGACCAAAAGAACTTCCTGAT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGTGGGTCAATGTCTCTaGAAGAAATTTCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDVGQCL*KKFLKF
Trigger: GAACTTCAGAAATTTCTTCCAGAGACATTGACCCAC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGTGGGTCAATGTCTCTaGAAGAAATTTCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSVGQCL*KKFLKF
Trigger: GAACTTCAGAAATTTCTTCCAGAGACATTGACCCAC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTATATCTGCGTAGCCTaGCTTCTACTCCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYYICVA*LLLQAS
Trigger: CGAGGCCTGGAGTAGAAGCCAGGCTACGCAGATATA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCAAAGAGATGCAGCCTaGCTCCTATCTGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILQRDAA*LLSAEF
Trigger: AAACTCAGCAGATAGGAGCCAGGCTGCATCTCTTTG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGATTAATCCCGCCATATaGGCTGATGGTTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILINPAI*ADGWNC
Trigger: GCAGTTCCAACCATCAGCCCATATGGCGGGATTAAT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGATTCCCCTTTATGTaGATAGGGATCCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILRFPFM*IGIPVP
Trigger: TGGCACAGGGATCCCTATCCACATAAAGGGGAATCT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp TGTAATACTTTTGTGTGGTATCATTCTGCTAATATATaGTCCACAGGGCCAAACCCCAAGTTACACAGCGCA +
Preference number: 4 (lower is better)
Translates to: CNTFVWYHSANI*STGPNPKLHSA
Trigger: TGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACAATATATTAGCAGAATGATACCACACAAAAGTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACGAAGTTCGACGGTTTaGTGTCTCGATGCAAGAATC +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLRSSTV*CLDARI
Trigger: GATTCTTGCATCGAGACATCAAACCGTCGAACTTCG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAGGCAATTTATCTGGTaGCACACCAACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYRQFIW*HTNRDA
Trigger: GGCATCCCTGTTGGTGTGTCACCAGATAAATTGCCT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTGGAGCTTTTCATCTTaGGGTGATGCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYWSFSS*GDASRT
Trigger: AGTCCTGGAGGCATCACCTCAAGATGAAAAGCTCCA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTTCCACCAGAAGCTTaGCTAGGTCTGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYFPPEA*LGLADR
Trigger: CCTATCAGCCAGACCTAGTCAAGCTTCTGGTGGAAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTTATCAGAGGCACTTaGGAGGTCGCCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYFIRGT*EVAKEG
Trigger: TCCTTCCTTGGCGACCTCTCAAGTGCCTCTGATAAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGTCTTGAAAAGGGAGTaGGCACTTCCTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLVLKRE*ALPPHK
Trigger: TTTGTGAGGAGGAAGTGCTCACTCCCTTTTCAAGAC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGAACTGAGACGAAGTTaGGCTATTGACCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILELRRS*AIDLIC
Trigger: ACAGATCAGGTCAATAGCTCAACTTCGTCTCAGTTC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGGGCATCTTCTATCTTaGAGGCTATTAACCCACACT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILGHLLS*RLLTHT
Trigger: AGTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGATGCACCTGTGGTTTCTaGACTTGGGTATACGCTGAT +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRCTCGF*TWVYAD
Trigger: ATCAGCGTATACCCAAGTTCAGAAACCACAGGTGCA...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATGTCCCAACACCCTCTaGGGGTTTTCATGCATTAAT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLCPNTL*GFSCIN
Trigger: ATTAATGCATGAAAACCCTCAGAGGGTGTTGGGACA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGCACTGGTATCTTTCTaGATTTTCTCCAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLALVSF*IFSRQV
Trigger: GACCTGCCTGGAGAAAATGCAGAAAGATACCAGTGC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCATTCTTGCTGGGTTTaGAATGCTCCTGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYHSCWV*NAPVGR
Trigger: CCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGTATGTCTTATCTATTaGATTCCTCTGGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSVCLIY*IPLECL
Trigger: CAAACACTCCAGAGGAATGCAATAGATAAGACATAC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTGAGAAAACATTCAGTTaGCACATTCCCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVEKTFS*HIPITV
Trigger: GACAGTGATGGGAATGTGGCAACTGAATGTTTTCTC...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCCCTGTGCCATGTCTTaGACTTACCTAAGAACTATA +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSPCAMS*TYLRTI
Trigger: TATAGTTCTTAGGTAAGTGCAAGACATGGCACAGGG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACTCAGAATTGAGGTGTaGAGCATCCAGATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLLRIEV*SIQIPL
Trigger: AAGGGGAATCTGGATGCTGCACACCTCAATTCTGAG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTCAACATGAGCCTGTaGTCATATCTCTCCTTAATA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSFNMSL*SYLSLI
Trigger: TATTAAGGAGAGATATGACCACAGGCTCATGTTGAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTCAACATGAGCCTGTaGTCATATCTCTCCTTAATA +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFFNMSL*SYLSLI
Trigger: TATTAAGGAGAGATATGACCACAGGCTCATGTTGAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAGGACAACTGGACTCTTaGGTGGTGTTTTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLGQLDS*VVFLDC
Trigger: ACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCC...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGGAAGCAGTCTACTCTaGTCAGTTTTCCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILGSSLL*SVFLLL
Trigger: GAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCCCTCGTATCATCTTaGATGCTGATATTACAAACA +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSLVSS*MLILQT
Trigger: TGTTTGTAATATCAGCATCCAAGATGATACGAGGGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAGCAGTGTTGGACAATaGATTCTAAAGGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVSSVGQ*ILKVPE
Trigger: CTCAGGAACCTTTAGAATCCATTGTCCAACACTGCT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGTTTTTCCCTAAAAGCTaGGAACTTGTAAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLFFPKS*ELVSKW
Trigger: CCATTTACTTACAAGTTCCCAGCTTTTAGGGAAAAA...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGCTTCTATTCAGTCCTaGGCTGCTTTTTCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILASIQS*AAFSRE
Trigger: TTCCCTAGAAAAAGCAGCCCAGGACTGAATAGAAGC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCGAAGTTCGACGGTTTaGTGTCTCGATGCAAGAATC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYRSSTV*CLDARI
Trigger: GATTCTTGCATCGAGACATCAAACCGTCGAACTTCG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGGAGATGTTTCAACATaGGCCTGTGGTCATATCTCT +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDGDVST*ACGHIS
Trigger: AGAGATATGACCACAGGCTCATGTTGAAACATCTCC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTCCAGCTCAAAGCTGTaGATGGAACGTAACTTTCGC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYSSSKL*MERNFR
Trigger: GCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTTGTCCTAAAATCCTaGAGGTCCTGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYFVLKS*RSCSLS
Trigger: GGACAAGGAGCAGGACCTTCAGGATTTTAGGACAAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTCTAGTTACAAAGGATaGCCTAACCATATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILSSYKG*PNHILP
Trigger: CGGAAGGATATGGTTAGGTCATCCTTTGTAACTAGA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGTTGAGCTATTGACCTaGTCTGTGTTGACCCATGAA +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDVELLT*SVLTHE
Trigger: TTCATGGGTCAACACAGATCAGGTCAATAGCTCAAC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGAACTGAGACGAAGTTaGGCTATTGACCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDELRRS*AIDLIC
Trigger: ACAGATCAGGTCAATAGCTCAACTTCGTCTCAGTTC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAAGAAGCCCAAATGTTaGACTAAAACACAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSKKPKC*TKTQEK
Trigger: CTTCTCCTGTGTTTTAGTTCAACATTTGGGCTTCTT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTTACTCAATGATAGGATaGGTTTCCACTCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVYSMIG*VSTLLP
Trigger: AGGAAGTAGAGTGGAAACTCATCCTATCATTGAGTA...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCTATCTGCTCCCCGTTaGTCTTGTAACATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLSAPR*SCNIWC
Trigger: ACACCAGATGTTACAAGATCAACGGGGAGCAGATAG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTACATGGTCTTTCCCTTaGAGCTTTTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVTWSFP*SFFKTA
Trigger: TGCTGTTTTGAAAAAGCTGCAAGGGAAAGACCATGT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATATTGGCAATTCCAATTaGAGCAGGGGTCAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYIGNSN*SRGQAS
Trigger: ACTCGCTTGACCCCTGCTGCAATTGGAATTGCCAAT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATATTGAGAAGACCATTTaGCTGGCCATGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYIEKTI*LAMAVL
Trigger: GAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAAT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGCACTGGTATCTTTCTaGATTTTCTCCAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYALVSF*IFSRQV
Trigger: GACCTGCCTGGAGAAAATGCAGAAAGATACCAGTGC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTGGGTTTATAAAACATaGACCAATGTACACTTTCTC +
Preference number: 4 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFWVYKT*TNVHFL
Trigger: GAGAAAGTGTACATTGGTGCATGTTTTATAAACCCA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAGAGAAGTTTTCCCTTaGAGAGTAAAGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVREVFP*RVKFHS
Trigger: ACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTATCAGGAAGTTCTTTTaGTCCCAGGTCTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSIRKFF*SQVLRF
Trigger: AAATCTCAAGACCTGGGACCAAAAGAACTTCCTGAT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAATTTTTGTCTTGATTTaGCACCACACTAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSIFVLI*HHTKSL
Trigger: CAGACTTTTAGTGTGGTGCCAAATCAAGACAAAAAT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATGTCTCCTTGATGACCTaGCAAGTCTTCACTCATGAT +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDVSLMT*QVFTHD
Trigger: ATCATGAGTGAAGACTTGCCAGGTCATCAAGGAGAC...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATAACTGGACTCTTGGGTaGTGTTTTTGGATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDNWTLG*CFWIVR
Trigger: CCTCACAATCCAAAAACACCACCCAAGAGTCCAGTT...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTCAGGCCATTCTTGCTaGGTTTGCAATGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYSGHSC*VCNAPV
Trigger: AACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAATATACATGAATACTaGCTCCCTGGCAACAGACTT +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSNIHEY*LPGNRL
Trigger: AAGTCTGTTGCCAGGGAGCCAGTATTCATGTATATT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGGAAGCAGTCTACTCTaGTCAGTTTTCCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLGSSLL*SVFLLL
Trigger: GAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp AATTCAGGAGAAATGCTACCTAAAGTGATTGAGCTGTaGCTAATTCTACCTTCTGTTCCACTCAAGTACCTC +
Preference number: 4 (lower is better)
Translates to: NSGEMLPKVIEL*LILPSVPLKYL
Trigger: GAGGTACTTGAGTGGAACAGAAGGTAGAATTAGCAACAGCTCAATCACTTTAGGTAGCATTTCTCCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTCATTGCAATACACTaGTATGGTAGAACAGCTACA +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLIAIH*YGRTAT
Trigger: TGTAGCTGTTCTACCATATCAGTGTATTGCAATGAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTGTTCCGATGTGCGTTaGTTGATGCATAACGAACTG +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYCSDVR*LMHNEL
Trigger: CAGTTCGTTATGCATCAATCAACGCACATCGGAACA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGTCTAGAAAGATGCTaGATTCTGGAGGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGLERC*ILEGDV
Trigger: AACATCTCCCTCCAGAATTCAGCATCTTTCTAGACC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAAAGCTATCTTCAGCTaGCCTACTCAGGTGAGAATC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYKAIFS*PTQVRI
Trigger: GATTCTCACCTGAGTAGGTCAGCTGAAGATAGCTTT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGTCTCCTTGATGACCTaGCAAGTCTTCACTCATGAT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYVSLMT*QVFTHD
Trigger: ATCATGAGTGAAGACTTGCCAGGTCATCAAGGAGAC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTGCTCTTTCTAGACTaGGAGATGATGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLLFLD*EMMGDR
Trigger: TCTGTCACCCATCATCTCCCAGTCTAGAAAGAGCAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATATTGTGAGGAGATCCTaGACTCTTGCACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYIVRRS*TLALSS
Trigger: ACTACTCAGTGCAAGAGTCCAGGATCTCCTCACAAT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATGAGCAGAAACGTCTTTaGTTAATTCTTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNEQKRL*LILSST
Trigger: TGTAGAGGAAAGAATTAACCAAAGACGTTTCTGCTC...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTCAGTGGACTACTTTaGCTGATGAACAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLSGLL*LMNSSN
Trigger: ATTTGAACTGTTCATCAGCCAAAGTAGTCCACTGAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp AAACGATGGACTGTTTATCTCTGGATCTTGATGAGTTaGTCAATGCCATTTAGAAAAGGGGACAACACACTA +
Preference number: 4 (lower is better)
Translates to: KRWTVYLWILMS*SMPFRKGDNTL
Trigger: TAGTGTGTTGTCCCCTTTTCTAAATGGCATTGACAAACTCATCAAGATCCAGAGATAAACAGTCCATCGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATACTTGTTTTGGTTGTTaGGCTGATTCCACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYTCFGC*ADSTFS
Trigger: ACTGAAGGTGGAATCAGCTCAACAACCAAAACAAGT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATTTACTCCAAAAGTCTTaGTGCTATTGTCAAACACGG +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDLLQKS*CYCQTR
Trigger: CCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAA...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGACAACCAGTCTATTATaGTCAGGAAGTTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILTTSLL*SGSSFG
Trigger: ACCAAAAGAACTTCCTGATCATAATAGACTGGTTGT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTATCTGGAAGAAATTTCTaGAGTTCCAACTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLSGRNF*SSNCQK
Trigger: CTTCTGACAGTTGGAACTTCAGAAATTTCTTCCAGA...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTTGTACAAAGACATTaGTTCCTAATCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLVQRH*FLIYLL
Trigger: CAGCAAGTAGATTAGGAATCAATGTCTTTGTACAAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATAAGAAGCCCAAATGTTaGACTAAAACACAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDKKPKC*TKTQEK
Trigger: CTTCTCCTGTGTTTTAGTTCAACATTTGGGCTTCTT...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATCTTCTATTTTTCACCTaGGAGACATCTAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDLLFFT*ETSKSA
Trigger: TGCGCTTTTAGATGTCTCTCAGGTGAAAAATAGAAG...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAATAGATTCTTTTCCTaGACTGGTATCTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVNRFFS*TGIFLH
Trigger: ATGCAGAAAGATACCAGTGCAGGAAAAGAATCTATT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTTAGCTATCTGTGTCTaGGTTTATAAAACATGCACC +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLAICV*VYKTCT
Trigger: GGTGCATGTTTTATAAACCCAGACACAGATAGCTAA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAAATTCTATAGTCACATaGGCTCAAAGATCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRNSIVT*AQRSAS
Trigger: TGAGGCAGATCTTTGAGCCCATGTGACTATAGAATT...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAACAAGAAAGAATTCTaGTTTGTGGCTGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSNKKEF*FVAESD
Trigger: ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTAGTCATCTAACTCATTaGTCTTGTTCAACAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SANSIVTWAQRSASSNLVSHLTH*SCSTRK
Trigger: CTTTCTTGTTGAACAAGACCAATGAGTTAGATGACT...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR TCA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGACTTGTACAAAGACATTaGTTCCTAATCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRLVQRH*FLIYLL
Trigger: CAGCAAGTAGATTAGGAATCAATGTCTTTGTACAAG...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAATAGATTCTTTTCCTaGACTGGTATCTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILNRFFS*TGIFLH
Trigger: ATGCAGAAAGATACCAGTGCAGGAAAAGAATCTATT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGAGATCTCAATACAATaGTGCCCTCTACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYEISIQ*CPLLNF
Trigger: GAAGTTAAGTAGAGGGCAGCATTGTATTGAGATCTC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCATGTTACTTTCTTTTaGAAGAGAAGATCAACACTG +
Preference number: 4 (lower is better)
Translates to: FLNLKSQSKALCFPRIILHVTFF*KRRSTL
Trigger: CAGTGTTGATCTTCTCTTGCAAAAGAAAGTAACATG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAGGCTTGGAGGCATCTaGAAGATATTCTTCATCATA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYRLGGI*KIFFII
Trigger: TATGATGAAGAATATCTTCCAGATGCCTCCAAGCCT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTGGAATCAATTTCTTaGTTGCAAGAGCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLESIS*LQELRL
Trigger: TAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLLNTKA*KIALVR
Trigger: TCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CCA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAATTTTTGTCTTGATTTaGCACCACACTAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: KEFWFVAESDLTAANSSLIFVLI*HHTKSL
Trigger: CAGACTTTTAGTGTGGTGCCAAATCAAGACAAAAAT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
3UTR CAA 72 bp AATTTATTTCTAAATCTCAAATCACAGTCCAAAGCATaGTGCTTCCCTCGTATCATCTTGGATGCTGATATT +
Preference number: 4 (lower is better)
Translates to: NLFLNLKSQSKA*CFPRIILDADI
Trigger: AATATCAGCATCCAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAATAAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR GCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCTAAACACTAAAGCCTaGAAAATAGCTCTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLNTKA*KIALVR
Trigger: TCTAACTAGAGCTATTTTGCAGGCTTTAGTGTTTAG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CCA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGAACTTGTAAGTAAATaGCCTAGTGAAATAGACACT +
Preference number: 4 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYELVSK*PSEIDT
Trigger: AGTGTCTATTTCACTAGGCCATTTACTTACAAGTTC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS GCA 90 bp GACCGGGACCGGCGGGGGTTAACCCTCGGCAGGCGGGACCGCCACTaGCTGCCCATCCCCCACCGCCGACTGCGGCGGGACCCGAGCGCG +
Preference number: 5 (lower is better)
Translates to: DRDRRGLTLGRRDRH*LPIPHRRLRRDPSA
Trigger: CGCGCTCGGGTCCCGCCGCAGTCGGCGGTGGGGGATGGGCAGGCAGTGGCGGTCCCGCCTGCCGAGGGTTAACCCCCGCCGGTCCCGGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp GGGACCCGAGCGCGGCTTCCAGGGCCGGCCGGCTGGGTAGTCCCCTaGGGTACCGTCCGCGTTTACTGGCGGCGGCGGCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GTRARLPGPAGWVVP*GTVRVYWRRRRRLL
Trigger: CAGCAGCCGCCGCCGCCGCCGCCAGTAAACGCGGACGGTACCCCAGGGGACTACCCAGCCGGCCGGCCCTGGAAGCCGCGCTCGGGTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp GGGCCGGCCGGCTGGGTAGTCCCCTGGGGTACCGTCCGCGTTTACTaGCGGCGGCGGCGGCGGCTGCTGCTGCTGTTACTGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GPAGWVVPWGTVRVY*RRRRRLLLLLLLLP
Trigger: CGGCAGCAGCAGTAACAGCAGCAGCAGCCGCCGCCGCCGCCGCCAGTAAACGCGGACGGTACCCCAGGGGACTACCCAGCCGGCCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS GCA 90 bp CGGCTGCTGCTGCTGTTACTGCTGCTGCCGGCTCCCCCAAGCCGCTaGTCTTGTGCCAGCACCTGCTCCCCCTCCTGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RLLLLLLLLPAPPSR*SCASTCSPSCRRRR
Trigger: GCGGCGGCGGCGGCAGGAGGGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTTGGGGGAGCCGGCAGCAGCAGTAACAGCAGCAGCAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS GCA 90 bp TTTACTGGCGGCGGCGGCGGCGGCTGCTGCTGCTGTTACTGCTGCTaGCGGCTCCCCCAAGCCGCTGCTCTTGTGCCAGCACCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FTGGGGGGCCCCYCC*RLPQAAALVPAPAP
Trigger: GGGAGCAGGTGCTGGCACAAGAGCAGCGGCTTGGGGGAGCCGGCAGCAGCAGTAACAGCAGCAGCAGCCGCCGCCGCCGCCGCCAGTAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp TTAACCTGGGCCGTGGCGGACGCAGGGGTTTCTGGAGGAGGGCTCTaGTCCAGCTCAGGACCGGGACCGGCGGGGGTTAACCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LTWAVADAGVSGGGL*SSSGPGPAGVNPRQ
Trigger: CTGCCGAGGGTTAACCCCCGCCGGTCCCGGTCCTGAGCTGGACCAGAGCCCTCCTCCAGAAACCCCTGCGTCCGCCACGGCCCAGGTTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp GGGTGGTTTCCATTTAACCTGGGCCGTGGCGGACGCAGGGGTTTCTaGAGGAGGGCTCTGGTCCAGCTCAGGACCGGGACCGGCGGGGGT +
Preference number: 5 (lower is better)
Translates to: GWFPFNLGRGGRRGF*RRALVQLRTGTGGG
Trigger: ACCCCCGCCGGTCCCGGTCCTGAGCTGGACCAGAGCCCTCCTCCAGAAACCCCTGCGTCCGCCACGGCCCAGGTTAAATGGAAACCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS GCA 90 bp TGGCTGAGTGGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTaGTGGGTTTGCAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: WLSGGGGCRILSGHS*WVCNAPVGRTSWRR
Trigger: CCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACCACTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 90 bp GGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTGCTGGGTTTaGAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGGAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: GGGGCRILSGHSCWV*NAPVGRTSWRRKIL
Trigger: CAGGATCTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGGAAGATCCTGAGTaGCTGGGAGGTGACTTGCTTCTCCCCAGATGTGGGGACGAACTC +
Preference number: 5 (lower is better)
Translates to: QCSCWQDLLEEEDPE*LGGDLLLPRCGDEL
Trigger: GAGTTCGTCCCCACATCTGGGGAGAAGCAAGTCACCTCCCAGCCACTCAGGATCTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CTGAGTGGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTGCTaGGTTTGCAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSGGGGCRILSGHSC*VCNAPVGRTSWRRK
Trigger: CTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACCACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 90 bp TGGAGGCTGCCGGATCCTTTCAGGCCATTCTTGCTGGGTTTGCAATaGTCCTGTTGGCAGGACCTCCTGGAGGAGGAAGATCCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: WRLPDPFRPFLLGLQ*SCWQDLLEEEDPEW
Trigger: CCACTCAGGATCTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CTACCCAGCCGGAGAGTGGTACTAATGGTGAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCCAGATTCCGACCCTGCAACTGCATG +
Preference number: 5 (lower is better)
Translates to: LPSRRVVLMVNVPRD*LRRRSARFRPCNCM
Trigger: CATGCAGTTGCAGGGTCGGAATCTGGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATTCACCATTAGTACCACTCTCCGGCTGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000562880.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp CCTGGCTCCTATCTGCTGAGTTTACTGGCTGGCTTACTCTTCCCTTaGGGGGTTTTAGTGCTGGCTGAGTGGTGGTGGAGGCTGCCGGAT +
Preference number: 5 (lower is better)
Translates to: PGSYLLSLLAGLLFP*GVLVLAEWWWRLPD
Trigger: ATCCGGCAGCCTCCACCACCACTCAGCCAGCACTAAAACCCCCCAAGGGAAGAGTAAGCCAGCCAGTAAACTCAGCAGATAGGAGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 90 bp ACGTGCGAGGCAAGGATGAGCTTCGAGGAGAGGCACTGGGACTCCTaGGAGGGACAACTGGACTCTTGGGTGGTGTTTTTGGATTGTGAG +
Preference number: 5 (lower is better)
Translates to: TCEARMSFEERHWDS*EGQLDSWVVFLDCE
Trigger: CTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAAGCTCATCCTTGCCTCGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CTACCCAGCCGGAGAGTGGTACTAATGGTGAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCCAGATTCCGACCCTTGCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LPSRRVVLMVNVPRD*LRRRSARFRPLQLF
Trigger: AAAAAGCTGCAAGGGTCGGAATCTGGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATTCACCATTAGTACCACTCTCCGGCTGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564431.5
CDS GCA 90 bp AGAGCTCAGGTTAACAGCTATAAATCCATTGCTGCCACCACCATCTaGCTGCTCAGGGGTGTTGGCAGAAGCAGGCTTGGAGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RAQVNSYKSIAATTI*LLRGVGRSRLGGIW
Trigger: CCAGATGCCTCCAAGCCTGCTTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGTTAACCTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp ACTGGGACTCCTGCGAGGGACAACTGGACTCTTGGGTGGTGTTTTTaGATTGTGAGGAGATCCTGGACTCTTGCACTGAGTAGTGCTCCG +
Preference number: 5 (lower is better)
Translates to: TGTPARDNWTLGWCF*IVRRSWTLALSSAP
Trigger: CGGAGCACTACTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp AGGAGAGGCACTGGGACTCCTGCGAGGGACAACTGGACTCTTGGGTaGTGTTTTTGGATTGTGAGGAGATCCTGGACTCTTGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: RRGTGTPARDNWTLG*CFWIVRRSWTLALS
Trigger: ACTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp TTCGAGGAGAGGCACTGGGACTCCTGCGAGGGACAACTGGACTCTTaGGTGGTGTTTTTGGATTGTGAGGAGATCCTGGACTCTTGCACT +
Preference number: 5 (lower is better)
Translates to: FEERHWDSCEGQLDS*VVFLDCEEILDSCT
Trigger: AGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp TGCCACCACCATCTGCCTGCTCAGGGGTGTTGGCAGAAGCAGGCTTaGAGGCATCTGGAAGATATTCTTCATCATAGTGCCAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: CHHHLPAQGCWQKQA*RHLEDILHHSARCG
Trigger: ACCACATCTGGCACTATGATGAAGAATATCTTCCAGATGCCTCCAAGCCTGCTTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCTGCCCACCCTTGCATaGTACACAGGGAAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGLPTLA*YTGKAR
Trigger: TCTTGCCTTCCCTGTGTACAATGCAAGGGTGGGCAG...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS TCA 90 bp TCTGCCTGCGCCTCCATTAGACTTGTGGGCGTCGCTGCAATAAACTaGCTAGCAGCTCCAGGCTGGAGTTCCAGCCTATCTGTATATTGT +
Preference number: 5 (lower is better)
Translates to: SACASIRLVGVAAIN*LAAPGWSSSLSVYC
Trigger: ACAATATACAGATAGGCTGGAACTCCAGCCTGGAGCTGCTAGTCAGTTTATTGCAGCGACGCCCACAAGTCTAATGGAGGCGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp ATCTGCCTGCTCAGGGGTGTTGGCAGAAGCAGGCTTGGAGGCATCTaGAAGATATTCTTCATCATAGTGCCAGATGTGGTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: ICLLRGVGRSRLGGI*KIFFIIVPDVVSTG
Trigger: TCCCGTACTGACCACATCTGGCACTATGATGAAGAATATCTTCCAGATGCCTCCAAGCCTGCTTCTGCCAACACCCCTGAGCAGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCCCAAGCCGCTGCTCTaGTGCCAGCACCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSPKPLL*CQHLLP
Trigger: GGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTTGGG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTCATTGGCAATTCCAATaGCAGCAGGGGTCAAGCGAG +
Preference number: 5 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTHWQFQ*QQGSSE
Trigger: CTCGCTTGACCCCTGCTGCAATTGGAATTGCCAATG...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS GCA 90 bp TGCCAGATGTGGTCAGTACGGGACACAGCAGGAACGCAAGGCTTATaGAGCAGAGCAGGGAGAATAGATTCTTTTCCTGCACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: CQMWSVRDTAGTQGL*SRAGRIDSFPALVS
Trigger: AGATACCAGTGCAGGAAAAGAATCTATTCTCCCTGCTCTGCTGCATAAGCCTTGCGTTCCTGCTGTGTCCCGTACTGACCACATCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CAACCAAGCCAGAGAAGTTTTCCCTTGGAGAGTAAAGTTCCACAGTaGGCTCCATGGGCTGAAGATCTTTCTTCTCTGGCTGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: QPSQRSFPLESKVPQ*APWAEDLSSLAADH
Trigger: GTGGTCAGCAGCCAGAGAAGAAAGATCTTCAGCCCATGGAGCCCACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTGGCTTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCTGAGCGGACACGAATaGGTGACCCAAGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLLSGHE*VTQGLE
Trigger: CTCCAAGCCTTGGGTCACCAATTCGTGTCCGCTCAG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGACCATATCCTTCCGGGTaGGGGCACCATGTTCATTCT +
Preference number: 5 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRPYPSG*GHHVHS
Trigger: AGAATGAACATGGTGCCCCAACCCGGAAGGATATGG...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS TCA 90 bp TCTGGCTTTGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTaGATGGAACGTAACTTTCGCACCAGTGGAATATCTCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SGFGSRVRRFSSSKL*MERNFRTSGISLSG
Trigger: GCCAGACAGAGATATTCCACTGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp ATCTTGTTTTTGTTGGCATCCATCTCTTCCCAAACATCCTTCTCCTaGGGACGGGGGTGTCCCAGAGATCCAGGCAATTTATCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ILFLLASISSQTSFS*GRGCPRDPGNLSGD
Trigger: GTCACCAGATAAATTGCCTGGATCTCTGGGACACCCCCGTCCCCAGGAGAAGGATGTTTGGGAAGAGATGGATGCCAACAAAAACAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp GGTGACCCAAGGCTTGGAGCATTGAGAAGACCATTTGCCTGGCCATaGCTGTTCTCCTCTTCAGTAGCAGCCTTACAAATTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GDPRLGALRRPFAWP*LFSSSVAALQIPSF
Trigger: AAAGCTTGGAATTTGTAAGGCTGCTACTGAAGAGGAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGGGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp CGAATTGGTGACCCAAGGCTTGGAGCATTGAGAAGACCATTTGCCTaGCCATGGCTGTTCTCCTCTTCAGTAGCAGCCTTACAAATTCCA +
Preference number: 5 (lower is better)
Translates to: RIGDPRLGALRRPFA*PWLFSSSVAALQIP
Trigger: TGGAATTTGTAAGGCTGCTACTGAAGAGGAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGGGTCACCAATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp GCTTTGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATaGAACGTAACTTTCGCACCAGTGGAATATCTCTGTCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALAPGSDVFPAQSCE*NVTFAPVEYLCLAE
Trigger: CTCAGCCAGACAGAGATATTCCACTGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 90 bp CATTTTCTCCAGGCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: HFLQAGLKELVSVWL*LQGQTFFQLKAVNG
Trigger: TCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTGGAGAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp TTTCTGCATTTTCTCCAGGCAGGTCTCAAGGAACTTGTCAGTGTCTaGCTTTGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FLHFLQAGLKELVSV*LWLQGQTFFQLKAV
Trigger: CACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTGGAGAAAATGCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CAGAGAAGTTTTCCCTTGGAGAGTAAAGTTCCACAGTGGGCTCCATaGGCTGAAGATCTTTCTTCTCTGGCTGCTGACCACAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: QRSFPLESKVPQWAP*AEDLSSLAADHSES
Trigger: GCTTTCACTGTGGTCAGCAGCCAGAGAAGAAAGATCTTCAGCCCATGGAGCCCACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp AGGAGGTTCACCCTCTGTCACAACCAAGCCAGAGAAGTTTTCCCTTaGAGAGTAAAGTTCCACAGTGGGCTCCATGGGCTGAAGATCTTT +
Preference number: 5 (lower is better)
Translates to: RRFTLCHNQAREVFP*RVKFHSGLHGLKIF
Trigger: AAAGATCTTCAGCCCATGGAGCCCACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTGGCTTGGTTGTGACAGAGGGTGAACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp GACAACTGGACTCTTGGGTGGTGTTTTTGGATTGTGAGGAGATCCTaGACTCTTGCACTGAGTAGTGCTCCGGGGTTTCTGAGATCCATT +
Preference number: 5 (lower is better)
Translates to: DNWTLGWCFWIVRRS*TLALSSAPGFLRSI
Trigger: AATGGATCTCAGAAACCCCGGAGCACTACTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTACCCAAGCCGCTGCTCTaGTGCCAGCACCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: KEFWFVAESDLTAANSSLPKPLL*CQHLLP
Trigger: GGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTTGGG...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCTCCTCCCCCACTCATaGCAATACACTGATATGGTA +
Preference number: 5 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGLLPHS*QYTDMV
Trigger: TACCATATCAGTGTATTGCAATGAGTGGGGGAGGAG...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTTCTTGGGTGGTGTTTTaGGATTGTGAGGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTSWVVF*DCEEIL
Trigger: CAGGATCTCCTCACAATCCAAAAACACCACCCAAGA...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGGTCAGCAAGGCCAGCTaGCATACCAGAGTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGVSKAS*HTRVKN
Trigger: ATTCTTAACTCTGGTATGCAAGCTGGCCTTGCTGAC...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS CCA 90 bp TCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATGCAGCCTaGCTCCTATCTGCTGAGTTTACTGGCTGGCTTACTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SGLGGRSHTFQRDAA*LLSAEFTGWLTLPL
Trigger: CAAGGGAAGAGTAAGCCAGCCAGTAAACTCAGCAGATAGGAGCCAGGCTGCATCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGCAGAAGGACTTCCAGTaGTTTTATGTCCTACAGCCT +
Preference number: 5 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGQKDFQ*FYVLQP
Trigger: AGGCTGTAGGACATAAAACAACTGGAAGTCCTTCTG...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTTGCAATGCTCCTGTaGGCAGGACCTCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFFAMLL*AGPPGG
Trigger: TCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGACCATTCTTGCTGGGTTaGCAATGCTCCTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRPFLLG*QCSCWQ
Trigger: CTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGG...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 90 bp GAGATGATGGGTGACAGAAAGCTATCTTCAGCTGACCTACTCAGGTaGGAATCTACTGTCAGTCTTGAAAAGGGAGTGAGCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EMMGDRKLSSADLLR*ESTVSLEKGVSTSS
Trigger: GGAGGAAGTGCTCACTCCCTTTTCAAGACTGACAGTAGATTCTCACCTGAGTAGGTCAGCTGAAGATAGCTTTCTGTCACCCATCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACATTGGCAATTCCAATaGCAGCAGGGGTCAAGCGAG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSHWQFQ*QQGSSE
Trigger: CTCGCTTGACCCCTGCTGCAATTGGAATTGCCAATG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATCCAAGGCTTGGAGCATaGAGAAGACCATTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDPRLGA*RRPFAW
Trigger: CCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGG...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGGAAGCCCTCTGGCCTaGACCTCAGGGATGATGCTG +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILGSPLA*TSGMML
Trigger: CAGCATCATCCCTGAGGTCAAGGCCAGAGGGCTTCC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAGCAGTAATTCTCAAATaGGGCAGGACGTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRAVILK*GRTLED
Trigger: GTCCTCCAACGTCCTGCCCAATTTGAGAATTACTGC...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS CCA 90 bp GTGTTGACCCATGAAACTGGCCTTGGAATTTTGCTCTTTCTAGACTaGGAGATGATGGGTGACAGAAAGCTATCTTCAGCTGACCTACTC +
Preference number: 5 (lower is better)
Translates to: VLTHETGLGILLFLD*EMMGDRKLSSADLL
Trigger: GAGTAGGTCAGCTGAAGATAGCTTTCTGTCACCCATCATCTCCCAGTCTAGAAAGAGCAAAATTCCAAGGCCAGTTTCATGGGTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp CACTATTTTATACCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: HYFIPGLKELVSVWL*LQGQTFFQLKAVNG
Trigger: TCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGGTATAAAATAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567274.5
ENST00000567840.5
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGACTCCTCCCCCACTCATaGCAATACACTGATATGGTA +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRLLPHS*QYTDMV
Trigger: TACCATATCAGTGTATTGCAATGAGTGGGGGAGGAG...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAACGTCACCACAGGAATaGGTAAATTGTCGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRTSPQE*VNCRAK
Trigger: CTTGGCTCGACAATTTACCAATTCCTGTGGTGACGT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATGGGATGGGAGTAGCATaGGCAATTCCAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDGMGVA*AIPIAA
Trigger: TGCTGCAATTGGAATTGCCAATGCTACTCCCATCCC...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGGGATGGGAGTAGCATaGGCAATTCCAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSGMGVA*AIPIAA
Trigger: TGCTGCAATTGGAATTGCCAATGCTACTCCCATCCC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCTGAGCGGACACGAATaGGTGACCCAAGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILLSGHE*VTQGLE
Trigger: CTCCAAGCCTTGGGTCACCAATTCGTGTCCGCTCAG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTT +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSCQCLA*APGSDV
Trigger: AACGTCTGACCCTGGAGCCAAAGCCAGACACTGACA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTAGTAGAGAGGTCTCCTaGATGACCTGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFSREVS*MTWQVF
Trigger: GAAGACTTGCCAGGTCATCAAGGAGACCTCTCTACT...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCATTCTGCTAATATATaGTCCACAGGGCCAAACCCC +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLHSANI*STGPNP
Trigger: GGGGTTTGGCCCTGTGGACAATATATTAGCAGAATG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TCTACCTTCTGTTCCACTCAAGTACCTCCAGGGACTAACAAGGGAAGGCAAGGGTTTTCAGAACTTGTTTaGGTTGTTGAGCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: STFCSTQVPPGTNKGRQGFSELV*VVELIP
Trigger: TGGAATCAGCTCAACAACCAAAACAAGTTCTGAAAA...CCCTTGCCTTCCCTTGTTAGTCCCTGGAGGTACTTGAGTGGAACAGAAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGCGAAGTTCGACGGTTaGATGTCTCGATGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFAKFDG*MSRCKN
Trigger: ATTCTTGCATCGAGACATCAAACCGTCGAACTTCGC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAACGTCACCACAGGAATaGGTAAATTGTCGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSTSPQE*VNCRAK
Trigger: CTTGGCTCGACAATTTACCAATTCCTGTGGTGACGT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGGAGCCTACTTGCTCCTaGTCCTTTATTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLEPTCS*SFIFLQ
Trigger: CTGGAGAAAAATAAAGGACAAGGAGCAAGTAGGCTC...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CCTTGCATTGTACACAGGGAAGGCAAGAAGACTCTGAGGTGTCACATGCCAAGATTTGGAATCAATTTCTaGCTTGCAAGAGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: PCIVHREGKKTLRCHMPRFGINF*LARAQV
Trigger: AACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAA...TCTTGGCATGTGACACCTCAGAGTCTTCTTGCCTTCCCTGTGTACAATGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TGTCCACAGGGCCAAACCCCAAGTTACACAGCGCAACAGTACTTGTCAACCACTACAATCACCCATTCTTaGGAATCAATTTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: CPQGQTPSYTAQQYLSTTTITHS*ESISCL
Trigger: CAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGT...AGTGGTTGACAAGTACTGTTGCGCTGTGTAACTTGGGGTTTGGCCCTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCCATATCCTTCCGGGTaGGGGCACCATGTTCATTCT +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSPYPSG*GHHVHS
Trigger: AGAATGAACATGGTGCCCCAACCCGGAAGGATATGG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAACTGGCCTTGGAATTTaGCTCTTTCTAGACTGGGAG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSTGLGI*LFLDWE
Trigger: CTCCCAGTCTAGAAAGAGCAAAATTCCAAGGCCAGT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTTTGCAATGCTCCTGTaGGCAGGACCTCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILFAMLL*AGPPGG
Trigger: TCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCCATTCTTGCTGGGTTaGCAATGCTCCTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSPFLLG*QCSCWQ
Trigger: CTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCACAGTCCAAAGCATaGTGCTTCCCTCGTATCATC +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSQSKA*CFPRII
Trigger: GATGATACGAGGGAAGCACAATGCTTTGGACTGTGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTCAAGTTCCCTACATaGCTAGGAGCCAAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLKFPT*LGAKGR
Trigger: CCTTCCCTTGGCTCCTAGCAATGTAGGGAACTTGAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATCCCTGTGCCATGTCTaGCACTTACCTAAGAACTAT +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRSLCHV*HLPKNY
Trigger: ATAGTTCTTAGGTAAGTGCAAGACATGGCACAGGGA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAACAGGAATTGGTAAATaGTCGAGCCAAGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRTGIGK*SSQAKI
Trigger: GATTTTGGCTTGGCTCGACAATTTACCAATTCCTGT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGAGCCTACTTGCTCCTaGTCCTTTATTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSEPTCS*SFIFLQ
Trigger: CTGGAGAAAAATAAAGGACAAGGAGCAAGTAGGCTC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGATGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTT +
Preference number: 5 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRCQCLA*APGSDV
Trigger: AACGTCTGACCCTGGAGCCAAAGCCAGACACTGACA...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTACAGCTATAAATCCATaGCTGCCACCACCATCTGCC +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSTAINP*LPPPSA
Trigger: GGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAGAAGGACTTCCAGTaGTTTTATGTCCTACAGCCT +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFQKDFQ*FYVLQP
Trigger: AGGCTGTAGGACATAAAACAACTGGAAGTCCTTCTG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAGAGAAGTTTTCCCTaGGAGAGTAAAGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFQRSFP*ESKVPQ
Trigger: CTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTG...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAGATCAGGAAGTTCTTTaGGTCCCAGGTCTTGAGATT +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSDQEVL*VPGLEI
Trigger: AATCTCAAGACCTGGGACCAAAAGAACTTCCTGATC...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTATTTATCAGAGGCACTaGAGAGGTCGCCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSIYQRH*RGRQGR
Trigger: CCTTCCTTGGCGACCTCTCAAGTGCCTCTGATAAAT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTGGGACAACTGGACTCTaGGGTGGTGTTTTTGGATTG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSGTTGL*GGVFGL
Trigger: CAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCC...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCCTTTCAGGCCATTCTaGCTGGGTTTGCAATGCTCC +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILPFRPF*LGLQCS
Trigger: GGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCGGGAAGGCCAAAATATaGAGAATACTCAATGATAGG +
Preference number: 5 (lower is better)
Translates to: VSIASVHIFCAHTTTNASGKAKI*RILNDR
Trigger: CCTATCATTGAGTATTCTCAATATTTTGGCCTTCCC...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTGCAGTGGGGCGATCTaGGCTTACTGTAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSCSGAI*AYCNLL
Trigger: CAGAAGATTACAGTAAGCCAAGATCGCCCCACTGCA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATCAAGTTCTGGTAGCCTaGTTTACCCCTTGTAGGCGA +
Preference number: 5 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNQVLVA*FTPCRR
Trigger: TCGCCTACAAGGGGTAAACAAGGCTACCAGAACTTG...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS TCA 90 bp CTTCCAGTTGTTTTATGTCCTACAGCCTCATTTGTCCTAAAATCCTaGAGGTCCTGCTCCTTGTCCACAATCACCCATTCTTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: LPVVLCPTASFVLKS*RSCSLSTITHSLES
Trigger: TGATTCCAAAGAATGGGTGATTGTGGACAAGGAGCAGGACCTTCAGGATTTTAGGACAAATGAGGCTGTAGGACATAAAACAACTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 90 bp TCCTGCTCCTTGTCCACAATCACCCATTCTTTGGAATCAATTTCTTaGTTGCAAGAGCTCAGGTTAACAGCTATAAATCCATTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SCSLSTITHSLESIS*LQELRLTAINPLLP
Trigger: TGGCAGCAATGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGTGGACAAGGAGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 90 bp AGAAAGATGCTGAATTCTGGAGGGAGATGTTTCAACATGAGCCTGTaGTCATATCTCTCCTTAATAGAGCCTACTTGCTCCTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: RKMLNSGGRCFNMSL*SYLSLIEPTCSLSF
Trigger: AAAGGACAAGGAGCAAGTAGGCTCTATTAAGGAGAGATATGACCACAGGCTCATGTTGAAACATCTCCCTCCAGAATTCAGCATCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATCAGGTCTCAAGGAACTaGTCAGTGTCTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDQVSRN*SVSGFG
Trigger: GCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTG...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGATTTTGGTCCCAGGTCTaGAGATTTGTTACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRFWSQV*RFVTFS
Trigger: AGAGAAAGTAACAAATCTCAAGACCTGGGACCAAAA...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGTAGAGAGGTCTCCTaGATGACCTGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILSREVS*MTWQVF
Trigger: GAAGACTTGCCAGGTCATCAAGGAGACCTCTCTACT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACTGATAGGCTTTCTTTaGGAGGAGCTTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLIGFL*EELFFC
Trigger: GCAAAAGAAAAGCTCCTCCAAAAGAAAGCCTATCAG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTACTGGCCTTGGAATTTaGCTCTTTCTAGACTGGGAG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSTGLGI*LFLDWE
Trigger: CTCCCAGTCTAGAAAGAGCAAAATTCCAAGGCCAGT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTCTTGGGTGGTGTTTTaGGATTGTGAGGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSSWVVF*DCEEIL
Trigger: CAGGATCTCCTCACAATCCAAAAACACCACCCAAGA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GTCAGCATCGCCAGTGTACATATATTCTGTGCCCATACTACCACTAACGCTTCCCTTCGTAAATTGAGATaGTATGAAAATCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: VSIASVHIFCAHTTTNASLRKLR*YENQAK
Trigger: CTTGGCCTGATTTTCATACAATCTCAATTTACGAAG...GGAAGCGTTAGTGGTAGTATGGGCACAGAATATATGTACACTGGCGATGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATCAACTGTATTAGGTTaGGCAGCAAACACAAGGTCA +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSTVLG*AANTRS
Trigger: TGACCTTGTGTTTGCTGCCAAACCTAATACAGTTGA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATATAGACCCTGAGGATTaGGCAGCAGAATTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNIDPED*AAEFRR
Trigger: TCTCCTGAATTCTGCTGCCAAATCCTCAGGGTCTAT...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAACAGCGCAACAGTACTaGTCAACCACTCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLTAQQY*STTPSP
Trigger: AGGAGATGGAGTGGTTGACAAGTACTGTTGCGCTGT...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TCAGCAAATTCTATAGTCACATGGGCTCAAAGATCTGCCTCATCCAATCTTGTTCAGAAAACCGTTACATaGCACAGGGCCATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SANSIVTWAQRSASSNLVQKTVT*HRAMKG
Trigger: TCCTTTCATGGCCCTGTGCAATGTAACGGTTTTCTG...AACAAGATTGGATGAGGCAGATCTTTGAGCCCATGTGACTATAGAATTTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTGTATTTCTGAAAGCTTaGTCACCTCAGTGGACTACT +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFVFLKA*SPQWTT
Trigger: AGTAGTCCACTGAGGTGACAAAGCTTTCAGAAATAC...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAAAACATGGTCTTTCCTaGCAGCTTTTTCAAAACAGC +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRKHGLS*QLFQNS
Trigger: GCTGTTTTGAAAAAGCTGCAAGGAAAGACCATGTTT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS TCA 90 bp AAAGTCTGTGTTTTTGTCACATCAAGAGGTTCAGTAGTAGCTGAGTaGTCCTTTTCCACAATTACCAAATCTCCTGGGAGAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: KVCVFVTSRGSVVAE*SFSTITKSPGREEI
Trigger: GATCTCCTCTCTCCCAGGAGATTTGGTAATTGTGGAAAAGGATCACTCAGCTACTACTGAACCTCTTGATGTGACAAAAACACAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAGCGAAGTTCGACGGTTaGATGTCTCGATGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLAKFDG*MSRCKN
Trigger: ATTCTTGCATCGAGACATCAAACCGTCGAACTTCGC...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGAAAGTCTTGATGCTATaGTCAAACACGGATGTAAGA +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLKVLML*SNTDVR
Trigger: TCTTACATCCGTGTTTGACAATAGCATCAAGACTTT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTCAAAGAGAAAAGTCTTGATGCTATaGTCAAACACGGATGTAAGA +
Preference number: 5 (lower is better)
Translates to: QGHTCIRFRRKISHLSKRKVLML*SNTDVR
Trigger: TCTTACATCCGTGTTTGACAATAGCATCAAGACTTT...TCTCTTTGAAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGCTTTATCTTGTTTTaGTTGGCATCCATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSSFILF*LASISS
Trigger: GGAAGAGATGGATGCCAACAAAAACAAGATAAAGCT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCCAAGGCTTGGAGCATaGAGAAGACCATTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYPRLGA*RRPFAW
Trigger: CCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCAGGTCTCAAGGAACTaGTCAGTGTCTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYQVSRN*SVSGFG
Trigger: GCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTTGGAATCAATTTCTaGCTTGCAAGAGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFFGINF*LARAQV
Trigger: AACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCATTTTGGTCCCAGGTCTaGAGATTTGTTACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSFWSQV*RFVTFS
Trigger: AGAGAAAGTAACAAATCTCAAGACCTGGGACCAAAA...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAATTTATCAGAGGCACTaGAGAGGTCGCCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRIYQRH*RGRQGR
Trigger: CCTTCCTTGGCGACCTCTCAAGTGCCTCTGATAAAT...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGTCCATTTTGAAGAATTaGGGCCAGGCGGGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILSILKN*GQAGEK
Trigger: CTTTTCTCCCGCCTGGCCCAAATTCTTCAAAATGGA...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATCCTTTCAGGCCATTCTaGCTGGGTTTGCAATGCTCC +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYPFRPF*LGLQCS
Trigger: GGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGG...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGATAAAAGCAGAGAGATaGAATCAGACGAGACATACA +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLIKAER*NQTRHT
Trigger: TGTATGTCTCGTCTGATTCAATCTCTCTGCTTTTAT...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTTTCCCTCGTATCATCTaGGATGCTGATATTACAAAC +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFFPRII*DADITN
Trigger: GTTTGTAATATCAGCATCCAAGATGATACGAGGGAA...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGTTCAGTGCAGCTTCAGGGCAGCTTTGATGCAGCATTAGAAGATGTTCACTTGCAAGGTGACCTGATCTaGTCACATACTTTAATTTTC +
Preference number: 5 (lower is better)
Translates to: SSVQLQGSFDAALEDVHLQGDLI*SHTLIF
Trigger: GAAAATTAAAGTATGTGACAAGATCAGGTCACCTTG...CAAGTGAACATCTTCTAATGCTGCATCAAAGCTGCCCTGAAGCTGCACTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTACAGGAATTGGTAAATaGTCGAGCCAAGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSTGIGK*SSQAKI
Trigger: GATTTTGGCTTGGCTCGACAATTTACCAATTCCTGT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATACAGCTATAAATCCATaGCTGCCACCACCATCTGCC +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYTAINP*LPPPSA
Trigger: GGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAACAATCACCCATTCTTaGGAATCAATTTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSTITHS*ESISCL
Trigger: CAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGT...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGCAGAGAAGTTTTCCCTaGGAGAGTAAAGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILQRSFP*ESKVPQ
Trigger: CTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTG...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGATCAGGAAGTTCTTTaGGTCCCAGGTCTTGAGATT +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILDQEVL*VPGLEI
Trigger: AATCTCAAGACCTGGGACCAAAAGAACTTCCTGATC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTGATAGGCTTTCTTTaGGAGGAGCTTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLIGFL*EELFFC
Trigger: GCAAAAGAAAAGCTCCTCCAAAAGAAAGCCTATCAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGGGACAACTGGACTCTaGGGTGGTGTTTTTGGATTG +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYGTTGL*GGVFGL
Trigger: CAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AGAAAGTACAGGGACACACATGCATCAGGTTTAGGAGGAAGATCTCACACCTTTATAAAAGCAGAGAGATaGAATCAGACGAGACATACA +
Preference number: 5 (lower is better)
Translates to: RKYRDTHASGLGGRSHTFIKAER*NQTRHT
Trigger: TGTATGTCTCGTCTGATTCAATCTCTCTGCTTTTAT...AAAGGTGTGAGATCTTCCTCCTAAACCTGATGCATGTGTGTCCCTGTACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAAGGGCATCTTCTATCTaGAAGGCTATTAACCCACAC +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLRASSI*KAINPH
Trigger: GTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCCT...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGGGCATCTTCTATCTaGAAGGCTATTAACCCACAC +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILRASSI*KAINPH
Trigger: GTGTGGGTTAATAGCCTTCAAGATAGAAGATGCCCT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGATCACAGTCCAAAGCATaGTGCTTCCCTCGTATCATC +
Preference number: 5 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRSQSKA*CFPRII
Trigger: GATGATACGAGGGAAGCACAATGCTTTGGACTGTGA...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAACCCAGAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCACTTCGTAAATTGAGATaGTATGAAAATCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: EPRRLKEAVYSGQFSFYSLRKLR*YENQAK
Trigger: CTTGGCCTGATTTTCATACAATCTCAATTTACGAAG...TGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTCTGGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTCAGAATTGAGGTGTGCAGCATCCAGATTCCCCTTTATGTGGATAGGGATAGTATGTCTTATCTATaGCATTCCTCTGGAGTGTTT +
Preference number: 5 (lower is better)
Translates to: FLRIEVCSIQIPLYVDRDSMSYL*HSSGVF
Trigger: AAACACTCCAGAGGAATGCAATAGATAAGACATACT...ATCCCTATCCACATAAAGGGGAATCTGGATGCTGCACACCTCAATTCTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAAGGGATTTCTCAGAATaGAGGTGTGCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: KEFWFVAESDLTAANSSLRDFSE*RCAASR
Trigger: TCTGGATGCTGCACACCTCAATTCTGAGAAATCCCT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAGCTTTATCTTGTTTTaGTTGGCATCCATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSSFILF*LASISS
Trigger: GGAAGAGATGGATGCCAACAAAAACAAGATAAAGCT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTAGGATGATTCCAAAGTaGAGTCTATCTCTTGTGCTA +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSRMIPK*SLSLVL
Trigger: TAGCACAAGAGATAGACTCAACTTTGGAATCATCCT...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTCCATTTTGAAGAATTaGGGCCAGGCGGGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYSILKN*GQAGEK
Trigger: CTTTTCTCCCGCCTGGCCCAAATTCTTCAAAATGGA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTATTTCTGAGATCCATTTaGAAGAATTTGGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: KEFWFVAESDLTAANSSLFLRSI*KNLGQA
Trigger: CGCCTGGCCCAAATTCTTCAAAATGGATCTCAGAAA...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATTTCCCTCGTATCATCTaGGATGCTGATATTACAAAC +
Preference number: 5 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNFPRII*DADITN
Trigger: GTTTGTAATATCAGCATCCAAGATGATACGAGGGAA...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGAGAGAAAACATTCAGTaGCCACATTCCCATCACTGT +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILRENIQ*PHSHHC
Trigger: ACAGTGATGGGAATGTGGCAACTGAATGTTTTCTCT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTAGGTCTCAGTTACCATTaGGCTACTTATTTAGGACTC +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLGLSYH*ATYLGL
Trigger: GAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACC...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATCCTCAGTGGACTACTTaGGCTGATGAACAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDPQWTT*ADEQFK
Trigger: TTTGAACTGTTCATCAGCCAAAGTAGTCCACTGAGG...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAAACATGGTCTTTCCCTaGCAGCTTTTTCAAAACAGC +
Preference number: 5 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRNMVFP*QLFQNS
Trigger: GCTGTTTTGAAAAAGCTGCAAGGGAAAGACCATGTT...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTCTTAATAGAGCCTACTaGCTCCTTGTCCTTTATTTT +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSLNRAY*LLVLYF
Trigger: AAAATAAAGGACAAGGAGCAAGTAGGCTCTATTAAG...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp GAAGACTTAAGGAAGCAGTCTACTCTGGTCAGTTTTCCTTCTACTCAAGTTTCTTTTATCTTGTTTTTGTaGGCATCCATCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: EDLRKQSTLVSFPSTQVSFILFL*ASISSQ
Trigger: TTGGGAAGAGATGGATGCCAACAAAAACAAGATAAA...AGAAACTTGAGTAGAAGGAAAACTGACCAGAGTAGACTGCTTCCTTAAGTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGGAATCAATTTCTTGCTaGCAAGAGCTCAGGTTAACA +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILESISC*QELRLT
Trigger: TGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTC...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTTCTGAGATCCATTTaGAAGAATTTGGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYFLRSI*KNLGQA
Trigger: CGCCTGGCCCAAATTCTTCAAAATGGATCTCAGAAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATTCAACTGTATTAGGTTaGGCAGCAAACACAAGGTCA +
Preference number: 5 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDSTVLG*AANTRS
Trigger: TGACCTTGTGTTTGCTGCCAAACCTAATACAGTTGA...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp ATAGTTTCAGAAAATGAAGATAGGCAAGGCCCAAGTGTACATGAGGCACACAATAGAAATGGGCAGATTTaGAAAGTGAATGCAAACAAC +
Preference number: 5 (lower is better)
Translates to: IVSENEDRQGPSVHEAHNRNGQI*KVNANN
Trigger: GTTGTTTGCATTCACTTTCAAAATCTGCCCATTTCT...ATTGTGTGCCTCATGTACACTTGGGCCTTGCCTATCTTCATTTTCTGAAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AAAGGACGAAAACTTTACTGTCATAATTCCAAGTTCAGTCAGGGATTTCTCAGAGTGAAATGCTGGGCATaGATTCCTCAGGATTTAAAC +
Preference number: 5 (lower is better)
Translates to: KGRKLYCHNSKFSQGFLRVKCWA*IPQDLN
Trigger: GTTTAAATCCTGAGGAATCAATGCCCAGCATTTCAC...TCTGAGAAATCCCTGACTGAACTTGGAATTATGACAGTAAAGTTTTCGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTACTTAATAGAGCCTACTaGCTCCTTGTCCTTTATTTT +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLNRAY*LLVLYF
Trigger: AAAATAAAGGACAAGGAGCAAGTAGGCTCTATTAAG...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp TTTCTAAATCTCAAATCACAGTCCAAAGCATTGTGCTTCCCTCGTATCATCTTGATTACTCCAAAAGTCTaGATGCTATTGTCAAACACG +
Preference number: 5 (lower is better)
Translates to: FLNLKSQSKALCFPRIILITPKV*MLLSNT
Trigger: CGTGTTTGACAATAGCATCAAGACTTTTGGAGTAAT...CAAGATGATACGAGGGAAGCACAATGCTTTGGACTGTGATTTGAGATTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAGTTTATCTCTGGATCTaGATGAGTTTGTCAATGCCA +
Preference number: 5 (lower is better)
Translates to: KEFWFVAESDLTAANSSLVYLWI*MSLSMP
Trigger: TGGCATTGACAAACTCATCAAGATCCAGAGATAAAC...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AAAGAATTCTGGTTTGTGGCTGAATCTGATTTAACAGCTGCCAATAGCTCATTAAGAGCAGAAACGTCTTaGGTTAATTCTTTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: KEFWFVAESDLTAANSSLRAETS*VNSFLY
Trigger: GTAGAGGAAAGAATTAACCAAAGACGTTTCTGCTCT...TAATGAGCTATTGGCAGCTGTTAAATCAGATTCAGCCACAAACCAGAATTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AATGTCTACAGTGGGTCTCAGTTACCATTTGGCTACTTATTTAGGACTCGATTATTGCTATTCAGTGTCTaGAGATTGTGTGGAAATTCA +
Preference number: 5 (lower is better)
Translates to: NVYSGSQLPFGYLFRTRLLLFSV*RLCGNS
Trigger: TGAATTTCCACACAATCTCAAGACACTGAATAGCAA...TAATCGAGTCCTAAATAAGTAGCCAAATGGTAACTGAGACCCACTGTAGACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp AACTCATTGGTCTTGTTCAACAAGAAAGAATTCTGGTTTGTGGCTGAATCTGATTTTATCTTGTTTTTGTaGGCATCCATCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: NSLVLFNKKEFWFVAESDFILFL*ASISSQ
Trigger: TTGGGAAGAGATGGATGCCAACAAAAACAAGATAAA...ATCAGATTCAGCCACAAACCAGAATTCTTTCTTGTTGAACAAGACCAATGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATGAATCAATTTCTTGCTaGCAAGAGCTCAGGTTAACA +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYESISC*QELRLT
Trigger: TGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTC...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATAGGATGATTCCAAAGTaGAGTCTATCTCTTGTGCTA +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYRMIPK*SLSLVL
Trigger: TAGCACAAGAGATAGACTCAACTTTGGAATCATCCT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATTTAGAAGATGTTCACTaGGGGAGGAAATGTATTCCT +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYLEDVH*GRKCIP
Trigger: AGGAATACATTTCCTCCCCAAGTGAACATCTTCTAA...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267890.11
CDS-3UTR CAA 90 bp CCAATTTACCTGACCTTAATAAGGTCTTTACAACACAAAACACCTAGAGAGTATATTACTCCAAAAGTCTaGATGCTATTGTCAAACACG +
Preference number: 5 (lower is better)
Translates to: PIYLTLIRSLQHKTPREYITPKV*MLLSNT
Trigger: CGTGTTTGACAATAGCATCAAGACTTTTGGAGTAAT...ATACTCTCTAGGTGTTTTGTGTTGTAAAGACCTTATTAAGGTCAGGTAAATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp CGGCGGGGGTTAACCCTCGGCAGGCGGGACCGCCACTaGCTGCCCATCCCCCACCGCCGACTGCGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: RRGLTLGRRDRH*LPIPHRRLRRD
Trigger: GTCCCGCCGCAGTCGGCGGTGGGGGATGGGCAGGCAGTGGCGGTCCCGCCTGCCGAGGGTTAACCCCCGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp GCGCGGCTTCCAGGGCCGGCCGGCTGGGTAGTCCCCTaGGGTACCGTCCGCGTTTACTGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: ARLPGPAGWVVP*GTVRVYWRRRR
Trigger: CCGCCGCCGCCGCCAGTAAACGCGGACGGTACCCCAGGGGACTACCCAGCCGGCCGGCCCTGGAAGCCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp GGCGGGACCCGAGCGCGGCTTCCAGGGCCGGCCGGCTaGGTAGTCCCCTGGGGTACCGTCCGCGTTTACTGG +
Preference number: 6 (lower is better)
Translates to: GGTRARLPGPAG*VVPWGTVRVYW
Trigger: CCAGTAAACGCGGACGGTACCCCAGGGGACTACCCAGCCGGCCGGCCCTGGAAGCCGCGCTCGGGTCCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS GCA 72 bp CTGCTGTTACTGCTGCTGCCGGCTCCCCCAAGCCGCTaGTCTTGTGCCAGCACCTGCTCCCCCTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LLLLLLPAPPSR*SCASTCSPSCR
Trigger: GCGGCAGGAGGGGGAGCAGGTGCTGGCACAAGAGCAGCGGCTTGGGGGAGCCGGCAGCAGCAGTAACAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp CCATTTAACCTGGGCCGTGGCGGACGCAGGGGTTTCTaGAGGAGGGCTCTGGTCCAGCTCAGGACCGGGACC +
Preference number: 6 (lower is better)
Translates to: PFNLGRGGRRGF*RRALVQLRTGT
Trigger: GGTCCCGGTCCTGAGCTGGACCAGAGCCCTCCTCCAGAAACCCCTGCGTCCGCCACGGCCCAGGTTAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp ACGTGCGAGGCAAGGATGAGCTTCGAGGAGAGGCACTaGGACTCCTGCGAGGGACAACTGGACTCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: TCEARMSFEERH*DSCEGQLDSWV
Trigger: CACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAAGCTCATCCTTGCCTCGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CTCCCCAGATGTGGGGACGAACTCCTCTGGTCATGGTaGGGCCGTCCAGCCCTAGATGGTGAGGAACTAGAC +
Preference number: 6 (lower is better)
Translates to: LPRCGDELLWSW*GRPALDGEELD
Trigger: GTCTAGTTCCTCACCATCTAGGGCTGGACGGCCCCACCATGACCAGAGGAGTTCGTCCCCACATCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 90 bp CTGGCTGAGTGGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTaGCTGGGTTTGCAATGCTCCTGTTGGCAGGACCTCCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LAEWWWRLPDPFRPF*LGLQCSCWQDLLEE
Trigger: CTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACCACTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp GGCTGCCGGATCCTTTCAGGCCATTCTTGCTGGGTTTaGAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GCRILSGHSCWV*NAPVGRTSWRR
Trigger: CCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp GGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTaGTGGGTTTGCAATGCTCCTGTTGGCAGGACCTCC +
Preference number: 6 (lower is better)
Translates to: GGGGCRILSGHS*WVCNAPVGRTS
Trigger: GGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp GGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTGCTaGGTTTGCAATGCTCCTGTTGGCAGGACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GGGCRILSGHSC*VCNAPVGRTSW
Trigger: CCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 90 bp TGGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTTGCTGGGTTaGCAATGCTCCTGTTGGCAGGACCTCCTGGAGGAGGAAGATCCT +
Preference number: 6 (lower is better)
Translates to: WWWRLPDPFRPFLLG*QCSCWQDLLEEEDP
Trigger: AGGATCTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp GGTAGAACAGCTACACAGGCATCCAGTTCCCAAGGGTaGTTTCCATTTAACCTGGGCCGTGGCGGACGCAGG +
Preference number: 6 (lower is better)
Translates to: GRTATQASSSQG*FPFNLGRGGRR
Trigger: CCTGCGTCCGCCACGGCCCAGGTTAAATGGAAACCACCCTTGGGAACTGGATGCCTGTGTAGCTGTTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp CGGAGAGTGGTACTAATGGTGAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCCAGATTCCGACCCTGC +
Preference number: 6 (lower is better)
Translates to: RRVVLMVNVPRD*LRRRSARFRPC
Trigger: GCAGGGTCGGAATCTGGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATTCACCATTAGTACCACTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267890.11
ENST00000562880.5
ENST00000566931.1
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CAA 72 bp AGGCTGCCGGATCCTTTCAGGCCATTCTTGCTGGGTTaGCAATGCTCCTGTTGGCAGGACCTCCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RLPDPFRPFLLG*QCSCWQDLLEE
Trigger: CTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp TGGTGGTGGAGGCTGCCGGATCCTTTCAGGCCATTCTaGCTGGGTTTGCAATGCTCCTGTTGGCAGGACCTC +
Preference number: 6 (lower is better)
Translates to: WWWRLPDPFRPF*LGLQCSCWQDL
Trigger: GAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp GCAAGGATGAGCTTCGAGGAGAGGCACTGGGACTCCTaGGAGGGACAACTGGACTCTTGGGTGGTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: ARMSFEERHWDS*EGQLDSWVVFL
Trigger: CAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCTCTCCTCGAAGCTCATCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp TATATCTGCGTAGCCTGGCTTCTACTCCAGGCCTCGTaGGTGGCTTTCCTGGTGGTGGCCGAGGAAAGAACT +
Preference number: 6 (lower is better)
Translates to: YICVAWLLLQAS*VAFLVVAEERT
Trigger: AGTTCTTTCCTCGGCCACCACCAGGAAAGCCACCCACGAGGCCTGGAGTAGAAGCCAGGCTACGCAGATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CGGAGAGTGGTACTAATGGTGAATGTGCCTCGGGACTaGCTACGGCGAAGATCTGCCAGATTCCGACCCTTG +
Preference number: 6 (lower is better)
Translates to: RRVVLMVNVPRD*LRRRSARFRPL
Trigger: CAAGGGTCGGAATCTGGCAGATCTTCGCCGTAGCCAGTCCCGAGGCACATTCACCATTAGTACCACTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564431.5
CDS GCA 72 bp ACAGCTATAAATCCATTGCTGCCACCACCATCTGCCTaGTCAGGGGTGTTGGCAGAAGCAGGCTTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: TAINPLLPPPSA*SGVLAEAGLEA
Trigger: TGCCTCCAAGCCTGCTTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp CCGGATCCTTTCAGGCCATTCTTGCTGGGTTTGCAATaGTCCTGTTGGCAGGACCTCCTGGAGGAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: PDPFRPFLLGLQ*SCWQDLLEEED
Trigger: ATCTTCCTCCTCCAGGAGGTCCTGCCAACAGGAGCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp AGGCACTGGGACTCCTGCGAGGGACAACTGGACTCTTaGGTGGTGTTTTTGGATTGTGAGGAGATCCTGGAC +
Preference number: 6 (lower is better)
Translates to: RHWDSCEGQLDS*VVFLDCEEILD
Trigger: GTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp GAGCGGACACGAATTGGTGACCCAAGGCTTGGAGCATaGAGAAGACCATTTGCCTGGCCATGGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ERTRIGDPRLGA*RRPFAWPWLFS
Trigger: GGAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGGGTCACCAATTCGTGTCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS TCA 72 bp GCCTCCATTAGACTTGTGGGCGTCGCTGCAATAAACTaGCTAGCAGCTCCAGGCTGGAGTTCCAGCCTATCT +
Preference number: 6 (lower is better)
Translates to: ASIRLVGVAAIN*LAAPGWSSSLS
Trigger: AGATAGGCTGGAACTCCAGCCTGGAGCTGCTAGTCAGTTTATTGCAGCGACGCCCACAAGTCTAATGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp CCAGGCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: PGRSQGTCQCLA*APGSDVFPAQS
Trigger: GCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 72 bp ACGGGGGTGTCCCAGAGATCCAGGCAATTTATCTGGTaGCACACCAACAGGGATGCCATTTTCTCCATCGCT +
Preference number: 6 (lower is better)
Translates to: TGVSQRSRQFIW*HTNRDAIFSIA
Trigger: AGCGATGGAGAAAATGGCATCCCTGTTGGTGTGTCACCAGATAAATTGCCTGGATCTCTGGGACACCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS GCA 72 bp GTTAACAGCTATAAATCCATTGCTGCCACCACCATCTaGCTGCTCAGGGGTGTTGGCAGAAGCAGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: VNSYKSIAATTI*LLRGVGRSRLG
Trigger: TCCAAGCCTGCTTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS GCA 72 bp CTAGGAATTGTAATCGCTGTAAGGGGTCCTTCTGCCTaGGCCTCCATTAGACTTGTGGGCGTCGCTGCAATA +
Preference number: 6 (lower is better)
Translates to: LGIVIAVRGPSA*ASIRLVGVAAI
Trigger: TATTGCAGCGACGCCCACAAGTCTAATGGAGGCGCAGGCAGAAGGACCCCTTACAGCGATTACAATTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp TTGTTGGCATCCATCTCTTCCCAAACATCCTTCTCCTaGGGACGGGGGTGTCCCAGAGATCCAGGCAATTTA +
Preference number: 6 (lower is better)
Translates to: LLASISSQTSFS*GRGCPRDPGNL
Trigger: TAAATTGCCTGGATCTCTGGGACACCCCCGTCCCCAGGAGAAGGATGTTTGGGAAGAGATGGATGCCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp CAGGCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: QAGLKELVSVWL*LQGQTFFQLKA
Trigger: AGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp TTTCTCCAGGCAGGTCTCAAGGAACTTGTCAGTGTCTaGCTTTGGCTCCAGGGTCAGACGTTTTTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FLQAGLKELVSV*LWLQGQTFFQL
Trigger: GAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp ACCCTCTGTCACAACCAAGCCAGAGAAGTTTTCCCTTaGAGAGTAAAGTTCCACAGTGGGCTCCATGGGCTG +
Preference number: 6 (lower is better)
Translates to: TLCHNQAREVFP*RVKFHSGLHGL
Trigger: CAGCCCATGGAGCCCACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTGGCTTGGTTGTGACAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CCTGCGAGGGACAACTGGACTCTTGGGTGGTGTTTTTaGATTGTGAGGAGATCCTGGACTCTTGCACTGAGT +
Preference number: 6 (lower is better)
Translates to: PARDNWTLGWCF*IVRRSWTLALS
Trigger: ACTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp ACTGGGACTCCTGCGAGGGACAACTGGACTCTTGGGTaGTGTTTTTGGATTGTGAGGAGATCCTGGACTCTT +
Preference number: 6 (lower is better)
Translates to: TGTPARDNWTLG*CFWIVRRSWTL
Trigger: AAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGAGTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp CACCCTCTGTCACAACCAAGCCAGAGAAGTTTTCCCTaGGAGAGTAAAGTTCCACAGTGGGCTCCATGGGCT +
Preference number: 6 (lower is better)
Translates to: HPLSQPSQRSFP*ESKVPQWAPWA
Trigger: AGCCCATGGAGCCCACTGTGGAACTTTACTCTCCAAGGGAAAACTTCTCTGGCTTGGTTGTGACAGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp TCCTGCGAGGGACAACTGGACTCTTGGGTGGTGTTTTaGGATTGTGAGGAGATCCTGGACTCTTGCACTGAG +
Preference number: 6 (lower is better)
Translates to: SCEGQLDSWVVF*DCEEILDSCTE
Trigger: CTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGTCCAGTTGTCCCTCGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 90 bp GTAATCTCTGAGCGGACACGAATTGGTGACCCAAGGCTTGGAGCATaGAGAAGACCATTTGCCTGGCCATGGCTGTTCTCCTCTTCAGTA +
Preference number: 6 (lower is better)
Translates to: VISERTRIGDPRLGA*RRPFAWPWLFSSSV
Trigger: TACTGAAGAGGAGAACAGCCATGGCCAGGCAAATGGTCTTCTCAATGCTCCAAGCCTTGGGTCACCAATTCGTGTCCGCTCAGAGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CAA 90 bp GCATTTTCTCCAGGCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATGG +
Preference number: 6 (lower is better)
Translates to: AFSPGRSQGTCQCLA*APGSDVFPAQSCEW
Trigger: CCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGCCTGGAGAAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 72 bp TCCAGCTGCTCTCCTCCCCCACTCATTGCAATACACTaGTATGGTAGAACAGCTACACAGGCATCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SSCSPPPLIAIH*YGRTATQASSS
Trigger: GGAACTGGATGCCTGTGTAGCTGTTCTACCATATCAGTGTATTGCAATGAGTGGGGGAGGAGAGCAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000267890.11
ENST00000562880.5
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567485.1
ENST00000567840.5
ENST00000622375.4
CDS GCA 72 bp TGGTCAGTACGGGACACAGCAGGAACGCAAGGCTTATaGAGCAGAGCAGGGAGAATAGATTCTTTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: WSVRDTAGTQGL*SRAGRIDSFPA
Trigger: TGCAGGAAAAGAATCTATTCTCCCTGCTCTGCTGCATAAGCCTTGCGTTCCTGCTGTGTCCCGTACTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CTCAGGGGTGTTGGCAGAAGCAGGCTTGGAGGCATCTaGAAGATATTCTTCATCATAGTGCCAGATGTGGTC +
Preference number: 6 (lower is better)
Translates to: LRGVGRSRLGGI*KIFFIIVPDVV
Trigger: GACCACATCTGGCACTATGATGAAGAATATCTTCCAGATGCCTCCAAGCCTGCTTCTGCCAACACCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp ACTCTTGGGTGGTGTTTTTGGATTGTGAGGAGATCCTaGACTCTTGCACTGAGTAGTGCTCCGGGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: TLGWCFWIVRRS*TLALSSAPGFL
Trigger: CAGAAACCCCGGAGCACTACTCAGTGCAAGAGTCCAGGATCTCCTCACAATCCAAAAACACCACCCAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp GCCACAGCTCGAGGTGGTCTGACGTCACCACAGGAATaGGTAAATTGTCGAGCCAAGCCAAAATCAAGCATG +
Preference number: 6 (lower is better)
Translates to: ATARGGLTSPQE*VNCRAKPKSSM
Trigger: CATGCTTGATTTTGGCTTGGCTCGACAATTTACCAATTCCTGTGGTGACGTCAGACCACCTCGAGCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267890.11
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp GGAGGAAGATCTCACACCTTTCAAAGAGATGCAGCCTaGCTCCTATCTGCTGAGTTTACTGGCTGGCTTACT +
Preference number: 6 (lower is better)
Translates to: GGRSHTFQRDAA*LLSAEFTGWLT
Trigger: AGTAAGCCAGCCAGTAAACTCAGCAGATAGGAGCCAGGCTGCATCTCTTTGAAAGGTGTGAGATCTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp ATACCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTTaGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: IPGLKELVSVWL*LQGQTFFQLKA
Trigger: AGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567274.5
ENST00000567840.5
CDS CAA 72 bp TATACCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: YTRSQGTCQCLA*APGSDVFPAQS
Trigger: GCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567274.5
ENST00000567840.5
CDS CAA 90 bp GGATTCCAACACTCAGGATATCCAGCTGCTCTCCTCCCCCACTCATaGCAATACACTGATATGGTAGAACAGCTACACAGGCATCCAGTT +
Preference number: 6 (lower is better)
Translates to: GFQHSGYPAALLPHS*QYTDMVEQLHRHPV
Trigger: AACTGGATGCCTGTGTAGCTGTTCTACCATATCAGTGTATTGCAATGAGTGGGGGAGGAGAGCAGCTGGATATCCTGAGTGTTGGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000267890.11
ENST00000562880.5
ENST00000564431.5
ENST00000566931.1
ENST00000567274.5
ENST00000567485.1
ENST00000567840.5
ENST00000622375.4
CDS CAA 90 bp TCAATTTCTTGCTTGCAAGAGCTCAGGTTAACAGCTATAAATCCATaGCTGCCACCACCATCTGCCTGCTCAGGGGTGTTGGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: SISCLQELRLTAINP*LPPPSACSGVLAEA
Trigger: TGCTTCTGCCAACACCCCTGAGCAGGCAGATGGTGGTGGCAGCAATGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 72 bp ATGTCTTCCCATTTCCCTGTTCCGATGTGCGTTGATTaGTGCATAACGAACTGTCCCTCGAAAACCTGCCAC +
Preference number: 6 (lower is better)
Translates to: MSSHFPVPMCVD*CITNCPSKTCH
Trigger: GTGGCAGGTTTTCGAGGGACAGTTCGTTATGCATCAATCAACGCACATCGGAACAGGGAAATGGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS TCA 72 bp GGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTaGATGGAACGTAACTTTCGCACCAGTGGAATATCT +
Preference number: 6 (lower is better)
Translates to: GSRVRRFSSSKL*MERNFRTSGIS
Trigger: AGATATTCCACTGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS TCA 72 bp TCAGGTGAGAATCTACTGTCAGTCTTGAAAAGGGAGTaGGCACTTCCTCCTCACAAAAGGGAGCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: SGENLLSVLKRE*ALPPHKREQEQ
Trigger: CTGTTCCTGCTCCCTTTTGTGAGGAGGAAGTGCTCACTCCCTTTTCAAGACTGACAGTAGATTCTCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 90 bp TGCCACAGCTCGAGGTGGTCTGACGTCACCACAGGAATTGGTAAATaGTCGAGCCAAGCCAAAATCAAGCATGTAACATTTCCTACATGT +
Preference number: 6 (lower is better)
Translates to: CHSSRWSDVTTGIGK*SSQAKIKHVTFPTC
Trigger: ACATGTAGGAAATGTTACATGCTTGATTTTGGCTTGGCTCGACAATTTACCAATTCCTGTGGTGACGTCAGACCACCTCGAGCTGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267890.11
ENST00000567840.5
ENST00000622375.4
CDS CAA 90 bp ACACTATTTTATACCAGGTCTCAAGGAACTTGTCAGTGTCTGGCTTaGGCTCCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATGG +
Preference number: 6 (lower is better)
Translates to: TLFYTRSQGTCQCLA*APGSDVFPAQSCEW
Trigger: CCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGGTATAAAATAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567274.5
ENST00000567840.5
CDS TCA 72 bp GAGCTGATTCCACCTTCAGTGCAACATTTTCCCTGGTaGGCATGTCCAAGGCATCGTAAATTTCTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: ELIPPSVQHFPW*ACPRHRKFLQS
Trigger: GCTTTGGAGAAATTTACGATGCCTTGGACATGCTCACCAGGGAAAATGTTGCACTGAAGGTGGAATCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267890.11
ENST00000562880.5
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS TCA 72 bp CATCATGTCTTCCCATTTCCCTGTTCCGATGTGCGTTaGTTGATGCATAACGAACTGTCCCTCGAAAACCTG +
Preference number: 6 (lower is better)
Translates to: HHVFPFPCSDVR*LMHNELSLENL
Trigger: CAGGTTTTCGAGGGACAGTTCGTTATGCATCAATCAACGCACATCGGAACAGGGAAATGGGAAGACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS TCA 72 bp GGTGACAGAAAGCTATCTTCAGCTGACCTACTCAGGTaGGAATCTACTGTCAGTCTTGAAAAGGGAGTGAGC +
Preference number: 6 (lower is better)
Translates to: GDRKLSSADLLR*ESTVSLEKGVS
Trigger: GCTCACTCCCTTTTCAAGACTGACAGTAGATTCTCACCTGAGTAGGTCAGCTGAAGATAGCTTTCTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CCAGGGTCAGACGTTTTTCCAGCTCAAAGCTGTGAATaGAACGTAACTTTCGCACCAGTGGAATATCTCTGT +
Preference number: 6 (lower is better)
Translates to: PGSDVFPAQSCE*NVTFAPVEYLC
Trigger: ACAGAGATATTCCACTGGTGCGAAAGTTACGTTCCATTCACAGCTTTGAGCTGGAAAAACGTCTGACCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CCA 72 bp TATTTTATACCAGGTCTCAAGGAACTTGTCAGTGTCTaGCTTTGGCTCCAGGGTCAGACGTTTTTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: YFIPGLKELVSV*LWLQGQTFFQL
Trigger: GAGCTGGAAAAACGTCTGACCCTGGAGCCAAAGCCAGACACTGACAAGTTCCTTGAGACCTGGTATAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567274.5
ENST00000567840.5
CDS CCA 72 bp CTGAATTCTGGAGGGAGATGTTTCAACATGAGCCTGTaGTCATATCTCTCCTTAATAGAGCCTACTTGCTCC +
Preference number: 6 (lower is better)
Translates to: LNSGGRCFNMSL*SYLSLIEPTCS
Trigger: GGAGCAAGTAGGCTCTATTAAGGAGAGATATGACCACAGGCTCATGTTGAAACATCTCCCTCCAGAATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CAA 90 bp GTCCTGCTCCTTGTCCACAATCACCCATTCTTTGGAATCAATTTCTaGCTTGCAAGAGCTCAGGTTAACAGCTATAAATCCATTGCTGCC +
Preference number: 6 (lower is better)
Translates to: VLLLVHNHPFFGINF*LARAQVNSYKSIAA
Trigger: GGCAGCAATGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGTGGACAAGGAGCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp CATGAAACTGGCCTTGGAATTTTGCTCTTTCTAGACTaGGAGATGATGGGTGACAGAAAGCTATCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HETGLGILLFLD*EMMGDRKLSSA
Trigger: AGCTGAAGATAGCTTTCTGTCACCCATCATCTCCCAGTCTAGAAAGAGCAAAATTCCAAGGCCAGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp TCGAGGTGGTCTGACGTCACCACAGGAATTGGTAAATaGTCGAGCCAAGCCAAAATCAAGCATGTAACATTT +
Preference number: 6 (lower is better)
Translates to: SRWSDVTTGIGK*SSQAKIKHVTF
Trigger: AAATGTTACATGCTTGATTTTGGCTTGGCTCGACAATTTACCAATTCCTGTGGTGACGTCAGACCACCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267890.11
ENST00000567840.5
ENST00000622375.4
CDS CAA 90 bp TGCTCCTTGTCCACAATCACCCATTCTTTGGAATCAATTTCTTGCTaGCAAGAGCTCAGGTTAACAGCTATAAATCCATTGCTGCCACCA +
Preference number: 6 (lower is better)
Translates to: CSLSTITHSLESISC*QELRLTAINPLLPP
Trigger: TGGTGGCAGCAATGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGTGGACAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CCA 72 bp AGGGATGCCATTTTCTCCATCGCTAAGCTGTTCATCTaGAAATACCTCATCTGTATTTTCTCGAAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: RDAIFSIAKLFI*KYLICIFSKQV
Trigger: GACTTGCTTCGAGAAAATACAGATGAGGTATTTCCAGATGAACAGCTTAGCGATGGAGAAAATGGCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
ENST00000622375.4
CDS CAA 72 bp CTGGCTGATAGGCTTTCTTTTGGAGGAGCTTTTCTTTaGCAGAAACTGGAGAGGATGATTCCAAAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: LADRLSFGGAFL*QKLERMIPKLS
Trigger: ACTCAACTTTGGAATCATCCTCTCCAGTTTCTGCAAAAGAAAAGCTCCTCCAAAAGAAAGCCTATCAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 72 bp GTTTTTGTCACATCAAGAGGTTCAGTAGTAGCTGAGTaGTCCTTTTCCACAATTACCAAATCTCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: VFVTSRGSVVAE*SFSTITKSPGR
Trigger: TCTCCCAGGAGATTTGGTAATTGTGGAAAAGGATCACTCAGCTACTACTGAACCTCTTGATGTGACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS TCA 72 bp CTGTGTTTTTGTCACATCAAGAGGTTCAGTAGTAGCTaGGTGATCCTTTTCCACAATTACCAAATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LCFCHIKRFSSS*VILFHNYQISW
Trigger: CCAGGAGATTTGGTAATTGTGGAAAAGGATCACTCAGCTACTACTGAACCTCTTGATGTGACAAAAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp CAGTCAAAAGGGTCACTCTCAATTACTCCAAAAGTCTaGATGCTATTGTCAAACACGGATGTAAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: QSKGSLSITPKV*MLLSNTDVRSW
Trigger: CCAGCTTCTTACATCCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAATTGAGAGTGACCCTTTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267890.11
ENST00000567274.5
ENST00000567840.5
CDS CAA 90 bp GTCTTCTCCCAGTCAAAAGGGTCACTCTCAATTACTCCAAAAGTCTaGATGCTATTGTCAAACACGGATGTAAGAAGTGTGGCAGTAATT +
Preference number: 6 (lower is better)
Translates to: VFSQSKGSLSITPKV*MLLSNTDVRSVAVI
Trigger: AATTACTGCCACACTTCTTACATCCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAATTGAGAGTGACCCTTTTGACTGGGAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS CAA 72 bp GGGTCACTCTCAATTACTCCAAAAGTCTTGATGCTATaGTCAAACACGGATGTAAGAAGTGTGGCAGTAATT +
Preference number: 6 (lower is better)
Translates to: GSLSITPKVLML*SNTDVRSVAVI
Trigger: AATTACTGCCACACTTCTTACATCCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAATTGAGAGTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS CAA 72 bp CAGTCAAAAGGGTCACTCTCAATTACTCCAAAAGTCTaGATGCTATTGTCAAACACGGATGTAAGAAGTGTG +
Preference number: 6 (lower is better)
Translates to: QSKGSLSITPKV*MLLSNTDVRSV
Trigger: CACACTTCTTACATCCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAATTGAGAGTGACCCTTTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS CAA 90 bp CAGTCAAAAGGGTCACTCTCAATTACTCCAAAAGTCTTGATGCTATaGTCAAACACGGATGTAAGAAGTGTGGCAGTAATTCTCAAATTG +
Preference number: 6 (lower is better)
Translates to: QSKGSLSITPKVLML*SNTDVRSVAVILKL
Trigger: CAATTTGAGAATTACTGCCACACTTCTTACATCCGTGTTTGACAATAGCATCAAGACTTTTGGAGTAATTGAGAGTGACCCTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622375.4
CDS GCA 72 bp TTGTCCACAATCACCCATTCTTTGGAATCAATTTCTTaGTTGCAAGAGCTCAGGTTAACAGCTATAAATCCA +
Preference number: 6 (lower is better)
Translates to: LSTITHSLESIS*LQELRLTAINP
Trigger: TGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGTGGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4
CDS CAA 72 bp TCCACAATCACCCATTCTTTGGAATCAATTTCTTGCTaGCAAGAGCTCAGGTTAACAGCTATAAATCCATTG +
Preference number: 6 (lower is better)
Translates to: STITHSLESISC*QELRLTAINPL
Trigger: CAATGGATTTATAGCTGTTAACCTGAGCTCTTGCAAGCAAGAAATTGATTCCAAAGAATGGGTGATTGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267890.11
ENST00000622375.4