RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSTD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136925

Ensembl transcript IDs: ENST00000341170.5, ENST00000375165.5, ENST00000375172.6, ENST00000375173.1, ENST00000484708.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGGAGGCGGGGCCAGGGCCTCAGCGCTATGGAAGAGTGTCCACTaGGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAA +
Preference number: 1 (lower is better)
Translates to: TGGGARASALWKSVH*GCTWPRSGTMLQGQ
Trigger: TTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCTCAGTGGACACTCTTCCATAGCGCTGAGGCCCTGGCCCCGCCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 90 bp CGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGCTGCCACGGTaGCAGCGGCCAGAACTGAAGTTCCCGATTTCTCTGTTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: RDSSPPAVKCRRLPR*QRPELKFPISLFLQ
Trigger: CTGCAGAAACAGAGAAATCGGGAACTTCAGTTCTGGCCGCTGCCACCGTGGCAGCCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 90 bp AGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATGGCCCAGGAGTaGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: SAMEECPLRLHMAQE*HHVAGTTIPIWLLL
Trigger: AAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCTCAGTGGACACTCTTCCATAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 90 bp AGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGATaGCCTAAGTGGCTTGTTTTAGGAGGCCACTCCCAGGGCCACAGC +
Preference number: 1 (lower is better)
Translates to: RFPSGERQRLRVDGR*PKWLVLGGHSQGHS
Trigger: GCTGTGGCCCTGGGAGTGGCCTCCTAAAACAAGCCACTTAGGTCATCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 90 bp CTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTaGCAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: LLVYAWLRMCFLEPV*QGHVPGTLARRLGS
Trigger: GCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 90 bp GTAGAAGGTCTGCTGACAAGGGCAATGACTACTAACAGCCCCAGCTaGATGGAACAGAAAGGGCATATGCTGTGGCCACCAGGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: VEGLLTRAMTTNSPS*MEQKGHMLWPPGSG
Trigger: GCCTGAGCCTGGTGGCCACAGCATATGCCCTTTCTGTTCCATGCAGCTGGGGCTGTTAGTAGTCATTGCCCTTGTCAGCAGACCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 90 bp TGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTaGTGGATGACCTCAGTAAGAATGTGTCATGTATTCCAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: CAWHTGQKTGQPPWQ*WMTSVRMCHVFQVL
Trigger: CAGCACCTGGAATACATGACACATTCTTACTGAGGTCATCCAGCACTGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 90 bp GGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATaGCAGTGCTGGATGACCTCAGTAAGAATGTGTCATGTATTCCAG +
Preference number: 1 (lower is better)
Translates to: GTCAWHTGQKTGQPP*QCWMTSVRMCHVFQ
Trigger: CTGGAATACATGACACATTCTTACTGAGGTCATCCAGCACTGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 90 bp CATATGCTGTGGCCACCAGGCTCAGGCTCTATCCCTCAGCAGCTTTaGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATC +
Preference number: 1 (lower is better)
Translates to: HMLWPPGSGSIPQQL*DPMQLTYFLCSSII
Trigger: GATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATAGAGCCTGAGCCTGGTGGCCACAGCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 90 bp GGCCACCAGGCTCAGGCTCTATCCCTCAGCAGCTTTGGGATCCCATaGAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAA +
Preference number: 1 (lower is better)
Translates to: GHQAQALSLSSFGIP*SSPIFCALASSKSE
Trigger: TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATAGAGCCTGAGCCTGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 90 bp AAAATACAGTATTGGCAGGGGGCGAAACCTGCGTACATGGAGGGCTaGTTTATCACATACGTGGGTTCTGTAGGGCCCACTGTGGGACTT +
Preference number: 1 (lower is better)
Translates to: KIQYWQGAKPAYMEG*FITYVGSVGPTVGL
Trigger: AAGTCCCACAGTGGGCCCTACAGAACCCACGTATGTGATAAATCAGCCCTCCATGTACGCAGGTTTCGCCCCCTGCCAATACTGTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 90 bp ACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTaGAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAAC +
Preference number: 1 (lower is better)
Translates to: TLRLYIKPPQDAGQW*RNSRYQGIGKSWPN
Trigger: GTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 90 bp ATCCCTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTaGTCTAGCATCATCCAAATCAGAATGTCTCAGGTAAGTGGTAGA +
Preference number: 1 (lower is better)
Translates to: IPQQLWDPMQLTYFL*SSIIQIRMSQVSGR
Trigger: TCTACCACTTACCTGAGACATTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 90 bp ATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTaGGATCCAGCAAAAGTGTTAAGCCACAATGCCCTTGTGCCTTTT +
Preference number: 1 (lower is better)
Translates to: ISTAARSLFNIMCVS*DPAKVLSHNALVPF
Trigger: AAAAGGCACAAGGGCATTGTGGCTTAACACTTTTGCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 90 bp AAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTaGGTCTCTTGGGATCCAGCAAAAGTGTTAAGCCACAATGCCCTT +
Preference number: 1 (lower is better)
Translates to: KCSISTAARSLFNIM*VSWDPAKVLSHNAL
Trigger: AAGGGCATTGTGGCTTAACACTTTTGCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCCCCGCTCACAGCGGATaGCCCCGGTACAGTACATCA +
Preference number: 2 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGPAHSG*PRYSTS
Trigger: TGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGG...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp CTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGGCCCAATGCACAGCTTaGAGATTCCCCTCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: LHMAQEWHHVAGTTIPIWAQCTA*RFPSGE
Trigger: CTCGCCTGAGGGGAATCTGCAAGCTGTGCATTGGGC...CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp AGGCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTTCGAATCTTGCCTGTaGGGTGCAGGTGCTGACACA +
Preference number: 2 (lower is better)
Translates to: RLNPAHSGCPRYSTSALSFESCL*GAGADT
Trigger: TGTGTCAGCACCTGCACCTCACAGGCAAGATTCGAA...AGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR-3UTR GCA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCCCTCCCCTTCTTCACTaGCCTGGCCACTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGPPLLH*PGHLSA
Trigger: AGCTGATAAGTGGCCAGGGCAGTGAAGAAGGGGAGG...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCAAGACGGCTGCCACGGTaGCAGCGGCCAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLARRLPR*QRPELK
Trigger: CTTCAGTTCTGGCCGCTGCCACCGTGGCAGCCGTCT...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CAA 90 bp GAGGTGCAGGTGCTGACACAGAGCTGTCTGCCAGGCACAGATCCATaGGGGATCCTCCAGGTCATGGTAGCAGTAATAAAGGAGCACCTC +
Preference number: 2 (lower is better)
Translates to: EVQVLTQSCLPGTDP*GILQVMVAVIKEHL
Trigger: GAGGTGCTCCTTTATTACTGCTACCATGACCTGGAGGATCCCCAATGGATCTGTGCCTGGCAGACAGCTCTGTGTCAGCACCTGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR TCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTGCCCACTGTGGGACTTaGGTATGCATTGGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPIAHCGT*VCIGFL
Trigger: CAAAAACCCAATGCATACTCAAGTCCCACAGTGGGC...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAACCTCCCCTCCCGCTGTaGAGTGTAGACGGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GIPCSSPIFCALASSKSEPPLPL*SVDGCH
Trigger: GTGGCAGCCGTCTACACTTCACAGCGGGAGGGGAGG...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCGGGGCTAAGCAGCCTTaGAATCGTCCTATTTTGCTT +
Preference number: 2 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLGAKQP*NRPILL
Trigger: AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCC...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTATGCCACCCTTGAGCTaGAACACCTCCTTGCACACT +
Preference number: 2 (lower is better)
Translates to: LVDATLELEHLLAHSLGFMPPLS*NTSLHT
Trigger: AGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCAT...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTCCTTCTTCACTGCCCTaGCCACTTATCAGCTCATCA +
Preference number: 2 (lower is better)
Translates to: LVDATLELEHLLAHSLGFPSSLP*PLISSS
Trigger: TGATGAGCTGATAAGTGGCCAGGGCAGTGAAGAAGG...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR TCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAGGCAGCGGCCAGAACTaGAGTTCCCGATTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: LSSFGIPCSSPIFCALASGSGQN*SSRFLC
Trigger: ACAGAGAAATCGGGAACTTCAGTTCTGGCCGCTGCC...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCAAAGACTCTTTGAGGTaGTCAATGTCACAGCCAGTT +
Preference number: 2 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGKDSLR*SMSQPV
Trigger: AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTT...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp CTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTCACCTATTTTCTGTaGTCTAGCATCATCCAAATC +
Preference number: 2 (lower is better)
Translates to: LHMAQEWHHVAGTTIPIWLTYFL*SSIIQI
Trigger: GATTTGGATGATGCTAGAGCACAGAAAATAGGTGAG...CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGACAGCTTTCATGTGTTTaGCACCAGGGTAGAAGGTCT +
Preference number: 2 (lower is better)
Translates to: TACRFPSGERQRLRVDGRQLSCV*HQGRRS
Trigger: AGACCTTCTACCCTGGTGGCAAACACATGAAAGCTG...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp CTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGTATACTCAGGCGTTCTaGAACTATCCTCCATGTATA +
Preference number: 2 (lower is better)
Translates to: LHMAQEWHHVAGTTIPIWYTQAF*NYPPCI
Trigger: TATACATGGAGGATAGTTCCAGAACGCCTGAGTATA...CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CAA 90 bp GGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTaGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGG +
Preference number: 2 (lower is better)
Translates to: GWLFLQKQEVSPMHS*QIPLRRETEVKGRW
Trigger: CCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCAAGCTTTGGGATCCCATaGAGCTCACCTATTTTCTGT +
Preference number: 2 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLASFGIP*SSPIFC
Trigger: ACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCT...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCGGAATCGTCCTATTTTaGTTTCATAGAAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLGIVLF*FHRSFC
Trigger: GCAGAAACTTCTATGAAAGCAAAATAGGACGATTCC...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGCGAAACCTGCGTACATaGAGGGCTGATTTATCACAT +
Preference number: 2 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQRNLRT*RADLSH
Trigger: ATGTGATAAATCAGCCCTCCATGTACGCAGGTTTCG...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTCAGGCACAGATCCATTaGGGATCCTCCAGGTCATGG +
Preference number: 2 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLQAQIH*GSSRSW
Trigger: CCATGACCTGGAGGATCCCCAATGGATCTGTGCCTG...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CTGGTAGCCAATTTGCTTCCACCAACTGTCCCATTGATTCCTTCTGCAGCAATTCAGGCACAGATCCATTaGGGATCCTCCAGGTCATGG +
Preference number: 2 (lower is better)
Translates to: LVANLLPPTVPLIPSAAIQAQIH*GSSRSW
Trigger: CCATGACCTGGAGGATCCCCAATGGATCTGTGCCTG...AATTGCTGCAGAAGGAATCAATGGGACAGTTGGTGGAAGCAAATTGGCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR CAA 90 bp GCAGCGGCCAGAACTGAAGTTCCCGATTTCTCTGTTTCTGCAGTCTaGCCATGCTTTCTCTGTATAGTCACCCCAAACCTACTTTTACCG +
Preference number: 2 (lower is better)
Translates to: AAARTEVPDFSVSAV*PCFLCIVTPNLLLP
Trigger: CGGTAAAAGTAGGTTTGGGGTGACTATACAGAGAAAGCATGGCAAGACTGCAGAAACAGAGAAATCGGGAACTTCAGTTCTGGCCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCTGTGGATGCCACCCTTaGGCTGGAACACCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSCGCHP*AGTPPC
Trigger: GCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACA...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGCAGTACAGGGTAACTaGAGGCGGGGCCAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TLKCSISTAARSLFNIMCAVQGN*RRGQGL
Trigger: GAGGCCCTGGCCCCGCCTCCAGTTACCCTGTACTGC...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTTCTTCCAGGTACTTGTaGATGCCACCCTTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLSSRYL*MPPLSW
Trigger: CCAGCTCAAGGGTGGCATCCACAAGTACCTGGAAGA...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAACTTTTACCGAGGGCCTaGGAAAATGCCAAAGGTGCT +
Preference number: 2 (lower is better)
Translates to: GIPCSSPIFCALASSKSELLPRA*ENAKGA
Trigger: AGCACCTTTGGCATTTTCCCAGGCCCTCGGTAAAAG...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTCAAGCAGACACGTCATaGCTATGTGGAAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLQADTS*LCGRHS
Trigger: AGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTG...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR TCA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTTGCTGGTTTGGTCTGTaGATAGCTGCCGACAGCATT +
Preference number: 2 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSCWFGL*IAADSI
Trigger: AATGCTGTCGGCAGCTATTCACAGACCAAACCAGCA...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAAAGGCCTTGAGCTaGAGAGCAACCTTGATAACC +
Preference number: 2 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSAKALS*RATLIT
Trigger: GGTTATCAAGGTTGCTCTCCAGCTCAAGGCCTTTGC...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp TCATCAGCATGTTGTGTTGCCACATGTCTATGGATGCTGGTTTGGTCTGTGAATGCAAAGGCCTTGAGCTaGAGAGCAACCTTGATAACC +
Preference number: 2 (lower is better)
Translates to: SSACCVATCLWMLVWSVNAKALS*RATLIT
Trigger: GGTTATCAAGGTTGCTCTCCAGCTCAAGGCCTTTGC...ATTCACAGACCAAACCAGCATCCATAGACATGTGGCAACACAACATGCTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTCTATGGATGCTGGTTTaGTCTGTGAATAGCTGCCGA +
Preference number: 2 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLLWMLV*SVNSCR
Trigger: TCGGCAGCTATTCACAGACCAAACCAGCATCCATAG...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATCGATTTCTCTGTTTCTaGAGTCTTGCCATGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNRFLCF*SLAMLS
Trigger: AGAAAGCATGGCAAGACTGCAGAAACAGAGAAATCG...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCCTTCTTCACTGCCCTaGCCACTTATCAGCTCATCA +
Preference number: 2 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSPSSLP*PLISSS
Trigger: TGATGAGCTGATAAGTGGCCAGGGCAGTGAAGAAGG...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR TCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTGTCACCGAGCTTATATaGAGCTCCCAGAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLVTELI*SSQREH
Trigger: ATGTTCTCTCTGGGAGCTTCATATAAGCTCGGTGAC...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp AATCCTACTGAAGACAAAGTCACAGGTACATTAATACAACTGGTACTTTGTTGCGGCAGGCAGGGCAGGTaGGATGATCCCCATGTTAAT +
Preference number: 2 (lower is better)
Translates to: NPTEDKVTGTLIQLVLCCGRQGR*DDPHVN
Trigger: ATTAACATGGGGATCATCTCACCTGCCCTGCCTGCC...GCAACAAAGTACCAGTTGTATTAATGTACCTGTGACTTTGTCTTCAGTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR TCA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCAATTCTGGAAAACAGTaGGCTCCTCCTTTGCTGGTC +
Preference number: 2 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPNSGKQ*APPLLV
Trigger: GACCAGCAAAGGAGGAGCTCACTGTTTTCCAGAATT...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR-3UTR GCA 90 bp AGAGTTTATACTGGTCCCAGCGGGCTCCACAGTATGAACACTCTGACACCACATACTTCCAAATGTATCTaGGTTAACCACACATACATG +
Preference number: 2 (lower is better)
Translates to: RVYTGPSGLHSMNTLTPHTSKCI*VNHTYM
Trigger: CATGTATGTGTGGTTAACGCAGATACATTTGGAAGT...ATGTGGTGTCAGAGTGTTCATACTGTGGAGCCCGCTGGGACCAGTATAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR-3UTR GCA 90 bp TGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAACCTCCCCTTCTTCACTaGCCTGGCCACTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: CCRTEHSVHQKQTTSLCKPPLLH*PGHLSA
Trigger: AGCTGATAAGTGGCCAGGGCAGTGAAGAAGGGGAGG...TTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCGTTGCCACATGTCTATaGATGCTGGTTTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPVATCL*MLVWSV
Trigger: CACAGACCAAACCAGCATCCATAGACATGTGGCAAC...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR TCA 90 bp TGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAATTTCAGTTTGGGCTCTaGGCCTGTGCTGACCTACCT +
Preference number: 2 (lower is better)
Translates to: CCRTEHSVHQKQTTSLCKFQFGL*ACADLP
Trigger: AGGTAGGTCAGCACAGGCTCAGAGCCCAAACTGAAA...TTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR GCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGAGCTCAGAGAGTAAGTaGTGGGGAAAGCAGAGCTAT +
Preference number: 2 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVSSESK*WGKQSY
Trigger: ATAGCTCTGCTTTCCCCAGCACTTACTCTCTGAGCT...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTGGTCTATGCATGGCTaGGTATGTGTTTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLWSMHG*VCVSWN
Trigger: GTTCCAAGAAACACATACGCAGCCATGCATAGACCA...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGATGCCGGACAATGGTaGAGAAACTCCAGATATCAA +
Preference number: 2 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSDAGQW*RNSRYQ
Trigger: TTGATATCTGGAGTTTCTTCACCATTGTCCGGCATC...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTCTGCAGTCTTGCCATaGTTTCTCTGTATAGTCACC +
Preference number: 2 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVSAVLP*FLCIVT
Trigger: GGTGACTATACAGAGAAAGCATGGCAAGACTGCAGA...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR GCA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTAATGTCACAGCCAGTTaGTTTAAAATAGAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLNVTAS*FKIEAV
Trigger: GACAGCTTCTATTTTAAAGCAACTGGCTGTGACATT...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp ACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGCTATGGATGCTGGTTTaGTCTGTGAATAGCTGCCGA +
Preference number: 2 (lower is better)
Translates to: TEHSVHQKQTTSLCKSHQLWMLV*SVNSCR
Trigger: TCGGCAGCTATTCACAGACCAAACCAGCATCCATAG...CTGATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CCA 90 bp ACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGGTTGCCACATGTCTATaGATGCTGGTTTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: TEHSVHQKQTTSLCKSHQVATCL*MLVWSV
Trigger: CACAGACCAAACCAGCATCCATAGACATGTGGCAAC...CTGATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAATGGTCTGTGAATAGCTaGCGACAGCATTTCCACAAT +
Preference number: 2 (lower is better)
Translates to: KFTESLKSMYQFQVKSPEWSVNS*RQHFHN
Trigger: ATTGTGGAAATGCTGTCGGCAGCTATTCACAGACCA...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR GCA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTAATGTCACAGCCAGTTaGTTTAAAATAGAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSNVTAS*FKIEAV
Trigger: GACAGCTTCTATTTTAAAGCAACTGGCTGTGACATT...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAAATCAGCATGTTGTGTTaGCACATGTCTATGGATGCT +
Preference number: 2 (lower is better)
Translates to: KFTESLKSMYQFQVKSPEISMLC*HMSMDA
Trigger: AGCATCCATAGACATGTGGCAACACAACATGCTGAT...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR GCA 90 bp TGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCATCAGCATGTTGTGTTaGCACATGTCTATGGATGCT +
Preference number: 2 (lower is better)
Translates to: CRTEHSVHQKQTTSLCKSISMLC*HMSMDA
Trigger: AGCATCCATAGACATGTGGCAACACAACATGCTGAT...GCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCGGAATCGTCCTATTTTaGTTTCATAGAAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSGIVLF*FHRSFC
Trigger: GCAGAAACTTCTATGAAAGCAAAATAGGACGATTCC...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CAA 90 bp AATGCCAACCTTATGATGGATGTGAAAATCTACGGCCAAATACTTTaGAAAACACCTTTCTATATTGCACAGTGGGCAAATGGCTTATGT +
Preference number: 2 (lower is better)
Translates to: NANLMMDVKIYGQIL*KTPFYIAQWANGLC
Trigger: ACATAAGCCATTTGCCCACTGTGCAATATAGAAAGGTGTTTTCAAAAGTATTTGGCCGTAGATTTTCACATCCATCATAAGGTTGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR TCA 90 bp ACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGGCACTCTCTTCTCTCTaGAAAGTTCTAGATTTTTGT +
Preference number: 2 (lower is better)
Translates to: TEHSVHQKQTTSLCKSHQALSSL*KVLDFC
Trigger: ACAAAAATCTAGAACTTTTCAGAGAGAAGAGAGTGC...CTGATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR GCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCAAATCTGTTGGTCTATaGATGGCTGCGTATGTGTTT +
Preference number: 2 (lower is better)
Translates to: TLKCSISTAARSLFNIMCKSVGL*MAAYVF
Trigger: AAACACATACGCAGCCATGCATAGACCAACAGATTT...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CCA 90 bp ATATCAACTCTTAGTGGTGGGCCTAATAACTATTTTCATTTTGAAGCAGTGATGCCACAGCTGGGAAAATaGTGGCACAATGTACTTATT +
Preference number: 2 (lower is better)
Translates to: ISTLSGGPNNYFHFEAVMPQLGK*WHNVLI
Trigger: AATAAGTACATTGTGCCACCATTTTCCCAGCTGTGG...CATCACTGCTTCAAAATGAAAATAGTTATTAGGCCCACCACTAAGAGTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR GCA 90 bp GAAGTTTCTGCAATCAAGAAGGATAGTATCACTTTGTTCTTGATTTGCCTGAGAACTTCCAAATGTATCTaGGTTAACCACACATACATG +
Preference number: 2 (lower is better)
Translates to: EVSAIKKDSITLFLICLRTSKCI*VNHTYM
Trigger: CATGTATGTGTGGTTAACGCAGATACATTTGGAAGT...TCTCAGGCAAATCAAGAACAAAGTGATACTATCCTTCTTGATTGCAGAAACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR TCA 72 bp CACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCTaGACCCCGCTCACAGCGGATGCCCCCGGTACAGTA +
Preference number: 3 (lower is better)
Translates to: HLLAHSLGFEVG*TPLTADAPGTV
Trigger: TACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CCA 72 bp TCCCCTCCCGCTGTGAAGTGTAGACGGCTGCCACGGTaGCAGCGGCCAGAACTGAAGTTCCCGATTTCTCTG +
Preference number: 3 (lower is better)
Translates to: SPPAVKCRRLPR*QRPELKFPISL
Trigger: CAGAGAAATCGGGAACTTCAGTTCTGGCCGCTGCCACCGTGGCAGCCGTCTACACTTCACAGCGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp AGGCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTAACTCTTCCAGGTACTaGTGGATGCCACCCTTGAGC +
Preference number: 3 (lower is better)
Translates to: RLNPAHSGCPRYSTSALSNSSRY*WMPPLS
Trigger: GCTCAAGGGTGGCATCCACAAGTACCTGGAAGAGTT...AGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CCA 72 bp GTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTaGCACACTGGCCAGAAGACTGGGCAGCCACCATGG +
Preference number: 3 (lower is better)
Translates to: VFLGTCVTGTCA*HTGQKTGQPPW
Trigger: CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp GAAGAGTGTCCACTGAGGCTGCACATGGCCCAGGAGTaGCACCATGTTGCAGGGACAACCATCCCCATTTGG +
Preference number: 3 (lower is better)
Translates to: EECPLRLHMAQE*HHVAGTTIPIW
Trigger: CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCTCAGTGGACACTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp GCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCAGTCTGGTAGCCAATTaGCTTCCACCAACTGTCCCA +
Preference number: 3 (lower is better)
Translates to: AEPRSQRMPPVQYISTLFSLVAN*LPPTVP
Trigger: TGGGACAGTTGGTGGAAGCAAATTGGCTACCAGACT...GAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR GCA 72 bp GTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTaGCTGGCACACTGGCCAGAAGACTGGGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: VCVSWNLCDRDM*LAHWPEDWAAT
Trigger: GGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp GCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATaGCAGTGCTGGATGACCTCAGTAAGAATGTGTCAT +
Preference number: 3 (lower is better)
Translates to: AWHTGQKTGQPP*QCWMTSVRMCH
Trigger: ATGACACATTCTTACTGAGGTCATCCAGCACTGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTATGCATTGGGTTTTaGTATACTCAGGCGTTCTGG +
Preference number: 3 (lower is better)
Translates to: DRDMCLAHWPEDWAATMAVCIGF*YTQAFW
Trigger: CCAGAACGCCTGAGTATACAAAAACCCAATGCATAC...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTTTGTGGATGCCACCCTaGAGCTGGAACACCTCCTTG +
Preference number: 3 (lower is better)
Translates to: LVDATLELEHLLAHSLGFLWMPP*SWNTSL
Trigger: CAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAA...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CCA 72 bp TGGCCACCAGGCTCAGGCTCTATCCCTCAGCAGCTTTaGGATCCCATGCAGCTCACCTATTTTCTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: WPPGSGSIPQQL*DPMQLTYFLCS
Trigger: AGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATAGAGCCTGAGCCTGGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp AGGCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTGGAACTTCTTTGGTTTaGACAAAAAGGGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: RLNPAHSGCPRYSTSALSGTSLV*TKRAKA
Trigger: GGCCTTTGCCCTTTTTGTCAAAACCAAAGAAGTTCC...AGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR TCA 72 bp TATTGGCAGGGGGCGAAACCTGCGTACATGGAGGGCTaGTTTATCACATACGTGGGTTCTGTAGGGCCCACT +
Preference number: 3 (lower is better)
Translates to: YWQGAKPAYMEG*FITYVGSVGPT
Trigger: AGTGGGCCCTACAGAACCCACGTATGTGATAAATCAGCCCTCCATGTACGCAGGTTTCGCCCCCTGCCAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp AACTCTTCCAGGTACTTGTGGATGCCACCCTTGAGCTaGAACACCTCCTTGCACACTCCCTTGGCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: NSSRYLWMPPLS*NTSLHTPLALR
Trigger: CCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAGTACCTGGAAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCGGAACTTCTTTGGTTTaGACAAAAAGGGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGGTSLV*TKRAKA
Trigger: GGCCTTTGCCCTTTTTGTCAAAACCAAAGAAGTTCC...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR TCA 72 bp TCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGATaGCCTAAGTGGCTTGTTTTAGGAGGCCACTCCCAG +
Preference number: 3 (lower is better)
Translates to: SGERQRLRVDGR*PKWLVLGGHSQ
Trigger: CTGGGAGTGGCCTCCTAAAACAAGCCACTTAGGTCATCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 72 bp TATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTaGCAGGGACATGTGCCTGGCACACTGGCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: YAWLRMCFLEPV*QGHVPGTLARR
Trigger: TCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 72 bp GCTCAGGCTCTATCCCTCAGCAGCTTTGGGATCCCATaGAGCTCACCTATTTTCTGTGCTCTAGCATCATCC +
Preference number: 3 (lower is better)
Translates to: AQALSLSSFGIP*SSPIFCALASS
Trigger: GGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATAGAGCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 72 bp CACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTaGTGGATGACCTCAGTAAGAATGTGTCATGTATTC +
Preference number: 3 (lower is better)
Translates to: HTGQKTGQPPWQ*WMTSVRMCHVF
Trigger: GAATACATGACACATTCTTACTGAGGTCATCCAGCACTGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp AGGCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTTTGTTGGAACTTCTTaGGTTTTGACAAAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: RLNPAHSGCPRYSTSALSFVGTS*VLTKRA
Trigger: TGCCCTTTTTGTCAAAACCAAAGAAGTTCCAACAAA...AGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CCA 72 bp ATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTaGAACCTGTGTGACAGGGACATGTGCCTGGCACAC +
Preference number: 3 (lower is better)
Translates to: ICWSMHGCVCVS*NLCDRDMCLAH
Trigger: GTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCTTTGTTGGAACTTCTTaGGTTTTGACAAAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLFVGTS*VLTKRA
Trigger: TGCCCTTTTTGTCAAAACCAAAGAAGTTCCAACAAA...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp CTGGTAGCCAATTTGCTTCCACCAACTGTCCCATTGATTCCTTCTGCAGCAATTAAAAGGGCAAAGGCCTaGAGCTGGAGAGCAACCTTG +
Preference number: 3 (lower is better)
Translates to: LVANLLPPTVPLIPSAAIKRAKA*SWRATL
Trigger: CAAGGTTGCTCTCCAGCTCAAGGCCTTTGCCCTTTT...AATTGCTGCAGAAGGAATCAATGGGACAGTTGGTGGAAGCAAATTGGCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR-3UTR CAA 90 bp AGCTTATATCAGGGAGCCAAGCAGACACGTCATGGCTATGTGGAAGGCACTCTTCATCAGCATGTTGTGTaGCCACATGTCTATGGATGC +
Preference number: 3 (lower is better)
Translates to: SLYQGAKQTRHGYVEGTLHQHVV*PHVYGC
Trigger: GCATCCATAGACATGTGGCAACACAACATGCTGATG...AAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp TCTTTTCATCTGCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTAAAAGGGCAAAGGCCTaGAGCTGGAGAGCAACCTTG +
Preference number: 3 (lower is better)
Translates to: SFHLQTKDSLRCSMSQPVKRAKA*SWRATL
Trigger: CAAGGTTGCTCTCCAGCTCAAGGCCTTTGCCCTTTT...AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATTATCCCTCAGCAGCTTaGGGATCCCATGCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNYPSAA*GSHAAH
Trigger: GTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATA...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 72 bp GCAGGCCACATAGTGTCTGTTGCAACTATTCAACTCTaGCATAGATCATGTGTAAAGGAATGGGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: AGHIVSVATIQL*HRSCVKEWVWL
Trigger: CAGCCACACCCATTCCTTTACACATGATCTATGGCAGAGTTGAATAGTTGCAACAGACACTATGTGGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp GCATGTTGTGTTGCCACATGTCTATGGATGCTGGTTTaGTCTGTGAATAGCTGCCGACAGCATTTCCACAAT +
Preference number: 3 (lower is better)
Translates to: ACCVATCLWMLV*SVNSCRQHFHN
Trigger: ATTGTGGAAATGCTGTCGGCAGCTATTCACAGACCAAACCAGCATCCATAGACATGTGGCAACACAACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp TGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCGCAGCAATTCGAATCTaGCCTGTGAGGTGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: CRTEHSVHQKQTTSLCKSAAIRI*PVRCRC
Trigger: GCACCTGCACCTCACAGGCAAGATTCGAATTGCTGC...GCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
3UTR TCA 72 bp CTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTaGAGAAACTCCAGATATCAAGGAATTGGGAAATCC +
Preference number: 3 (lower is better)
Translates to: LYIKPPQDAGQW*RNSRYQGIGKS
Trigger: GGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR GCA 72 bp CAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTaGTCTAGCATCATCCAAATCAGAATGTCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: QLWDPMQLTYFL*SSIIQIRMSQV
Trigger: TACCTGAGACATTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp GCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTaGGATCCAGCAAAAGTGTTAAGCCACAATGCCCTT +
Preference number: 3 (lower is better)
Translates to: AARSLFNIMCVS*DPAKVLSHNAL
Trigger: AAGGGCATTGTGGCTTAACACTTTTGCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CCA 72 bp AAGCAGCTTATATCAGGGAGCCAAGCAGACACGTCATaGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: KQLISGSQADTS*LCGRHSFKGFF
Trigger: AAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTCCAGATATCAAGGAATaGGGAAATCCTGGCCAAACC +
Preference number: 3 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLPDIKE*GNPGQT
Trigger: GGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGG...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCCAGACGAAAGACTCTTaGAGGTGCTCAATGTCACAG +
Preference number: 3 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPQTKDS*RCSMSQ
Trigger: CTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTG...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR TCA 72 bp GTGTTGCCACATGTCTATGGATGCTGGTTTGGTCTGTaGATAGCTGCCGACAGCATTTCCACAATTTTTCTT +
Preference number: 3 (lower is better)
Translates to: VLPHVYGCWFGL*IAADSISTIFL
Trigger: AAGAAAAATTGTGGAAATGCTGTCGGCAGCTATTCACAGACCAAACCAGCATCCATAGACATGTGGCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTCATCATGTGCGTCTCTaGGGATCCAGCAAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSHHVRL*GSSKSV
Trigger: AACACTTTTGCTGGATCCCAAGAGACGCACATGATG...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR-3UTR CAA 90 bp ATATCAACTCTTAGTGGTGGGCCTAATAACTATTTTCATTTTGAAGCAGTGATGAGCTGGAACACCTCCTaGCACACTCCCTTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: ISTLSGGPNNYFHFEAVMSWNTS*HTPLAL
Trigger: CAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCT...CATCACTGCTTCAAAATGAAAATAGTTATTAGGCCCACCACTAAGAGTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR-3UTR CAA 90 bp TGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGCATGTTGTGTaGCCACATGTCTATGGATGC +
Preference number: 3 (lower is better)
Translates to: CRTEHSVHQKQTTSLCKSHQHVV*PHVYGC
Trigger: GCATCCATAGACATGTGGCAACACAACATGCTGATG...GCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp TCTTTTCATCTGCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTAATTTCATCAGCATGTaGTGTTGCCACATGTCTATG +
Preference number: 3 (lower is better)
Translates to: SFHLQTKDSLRCSMSQPVNFISM*CCHMSM
Trigger: CATAGACATGTGGCAACACAACATGCTGATGAAATT...AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp GAAGTTTCTGCAATCAAGAAGGATAGTATCACTTTGTTCTTGATTTGCCTGAGACAGACGAAAGACTCTTaGAGGTGCTCAATGTCACAG +
Preference number: 3 (lower is better)
Translates to: EVSAIKKDSITLFLICLRQTKDS*RCSMSQ
Trigger: CTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTG...TCTCAGGCAAATCAAGAACAAAGTGATACTATCCTTCTTGATTGCAGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR-3UTR CAA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTTTCAACCATACAGGTaGAAAATACAGTATTGGCAG +
Preference number: 3 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLFQPYR*KIQYWQ
Trigger: CTGCCAATACTGTATTTTCAACCTGTATGGTTGAAA...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 72 bp TCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATaGAGCTCCCAGAGAGAACATTTAAAAGCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: SKNCGSNVTELI*SSQREHLKAQR
Trigger: TCTCTGAGCTTTTAAATGTTCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR TCA 72 bp ATACAATTATTTTTCCATCCAAATTCACAGAATCCCTaGAATCTATGTACCAATTCCAGGTTAAGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: IQLFFHPNSQNP*NLCTNSRLRAL
Trigger: CAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTTGGATGGAAAAATAATTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR TCA 72 bp TCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTaGAAACTGCAATATAATATTAAATCTGTTGGTCTA +
Preference number: 3 (lower is better)
Translates to: SLKHNCSCILHR*KLQYNIKSVGL
Trigger: TAGACCAACAGATTTAATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTCCTCCCCTCCCGCTGTaGAGTGTAGACGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPIPPLPL*SVDGCH
Trigger: GTGGCAGCCGTCTACACTTCACAGCGGGAGGGGAGG...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGCCCAATGCACAGCTTaGAGATTCCCCTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMAAQCTA*RFPSGE
Trigger: CTCGCCTGAGGGGAATCTGCAAGCTGTGCATTGGGC...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAACCTCCCGCCAGTCCTaGTCCTTTCTAAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMATSRQS*SFLRSL
Trigger: GAGAGACCTTAGAAAGGATCAGGACTGGCGGGAGGT...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp TGTGAGGTGCAGGTGCTGACACAGAGCTGTCTGCCAGGCACAGATCCATTGGGGGGCTTTGAGGTAGGCTaGACCCCGCTCACAGCGGAT +
Preference number: 4 (lower is better)
Translates to: CEVQVLTQSCLPGTDPLGGFEVG*TPLTAD
Trigger: ATCCGCTGTGAGCGGGGTTCAGCCTACCTCAAAGCC...CCCCAATGGATCTGTGCCTGGCAGACAGCTCTGTGTCAGCACCTGCACCTCACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGATCAGGCCCTGGCTCTaGGCTCACAGGCTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRIRPWL*AHRLSH
Trigger: GTGCGACAGCCTGTGAGCCCAGAGCCAGGGCCTGAT...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGGTGAGGTGCAGGTGCTaGCACAGAGCTGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRVRCRC*HRAVCQ
Trigger: CTGGCAGACAGCTCTGTGTCAGCACCTGCACCTCAC...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCTGTGGATGCCACCCTTaGGCTGGAACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGCGCHP*AGTPPC
Trigger: GCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACA...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTCTTGCATAGGGCCTaGAACTTTCCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMAVLHRA*NFPAPL
Trigger: AAGGGGAGCAGGAAAGTTTCAGGCCCTATGCAAGAC...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp AGGCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTGGCAGGCAGGGCAGGTaGGATGATCCCCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: RLNPAHSGCPRYSTSALSGRQGR*DDPHVN
Trigger: ATTAACATGGGGATCATCTCACCTGCCCTGCCTGCC...AGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCACAGCCACCATGGCAGTaGTGGATGACCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMAQPPWQ*WMTSVR
Trigger: TCTTACTGAGGTCATCCAGCACTGCCATGGTGGCTG...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGAGCAGTACAGGGTAACTaGAGGCGGGGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRAVQGN*RRGQGL
Trigger: GAGGCCCTGGCCCCGCCTCCAGTTACCCTGTACTGC...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGTTCTTGGAACCTGTGTaGCAGGGACATGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LHMAQEWHHVAGTTIPIWFLEPV*QGHVPG
Trigger: GCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAA...CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp GCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTTTCAGTTTGGGCTCTaGGCCTGTGCTGACCTACCT +
Preference number: 4 (lower is better)
Translates to: AEPRSQRMPPVQYISTLFFQFGL*ACADLP
Trigger: AGGTAGGTCAGCACAGGCTCAGAGCCCAAACTGAAA...GAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCCCTCCCCTTCTTCACTaGCCTGGCCACTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLPPLLH*PGHLSA
Trigger: AGCTGATAAGTGGCCAGGGCAGTGAAGAAGGGGAGG...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAGAAAAGGTGAAGGCCTaGGCACTGAACTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMAEKVKA*ALNCKA
Trigger: TGCCTTACAGTTCAGTGCGCAGGCCTTCACCTTTTC...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTTCCAGGTACTTGTaGATGCCACCCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEPRSQRMPPVQYISTLFSSRYL*MPPLSW
Trigger: CCAGCTCAAGGGTGGCATCCACAAGTACCTGGAAGA...GAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGAGACGGCTGCCACGGTaGCAGCGGCCAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQRRLPR*QRPELK
Trigger: CTTCAGTTCTGGCCGCTGCCACCGTGGCAGCCGTCT...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTACAGGGACATGTGCCTaGCACACTGGCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPITGTCA*HTGQKT
Trigger: AGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGT...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGCACATGGCCCAGGAGTaGCACCATGTTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRHMAQE*HHVAGT
Trigger: TGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTG...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGGGCTTTGAGGTAGGCTaGACCCCGCTCACAGCGGAT +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQGFEVG*TPLTAD
Trigger: ATCCGCTGTGAGCGGGGTTCAGCCTACCTCAAAGCC...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTaGGCAGCCACCATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLAHWPED*AATMAV
Trigger: CACTGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTG...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CAA 72 bp GTGGCCACCAGGCTCAGGCTCTATCCCTCAGCAGCTTaGGGATCCCATGCAGCTCACCTATTTTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VATRLRLYPSAA*GSHAAHLFSVL
Trigger: GAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGATAGAGCCTGAGCCTGGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTACCTCCCGCCAGTCCTaGTCCTTTCTAAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVDATLELEHLLAHSLGFTSRQS*SFLRSL
Trigger: GAGAGACCTTAGAAAGGATCAGGACTGGCGGGAGGT...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCATGTGGATGCCACCCTTaGGCTGGAACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLACGCHP*AGTPPC
Trigger: GCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACA...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTGGCCTGAAACTTTCCTaGTCCCCTTGTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPIGLKLS*SPCLDM
Trigger: CATGTCAAGACAAGGGGAGCAGGAAAGTTTCAGGCC...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACCCCCGCCGCGTATTTaGGTAGAAAAGCTCGCTCGT +
Preference number: 4 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLAPPPRI*VEKLAR
Trigger: ACGAGCGAGCTTTTCTACCCAAATACGCGGCGGGGG...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGCAGGTCAAAACGAGCTaGCGGCACTGGGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQQVKTS*RHWGVE
Trigger: CTCTACTCCCCAGTGCCGCCAGCTCGTTTTGACCTG...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGACCTCCCCTTCTTCACTaGCCTGGCCACTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRPPLLH*PGHLSA
Trigger: AGCTGATAAGTGGCCAGGGCAGTGAAGAAGGGGAGG...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGGGAGTGGCACCATGTTaGAGGGACAACCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQGVAPC*RDNHPH
Trigger: ATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCC...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCGTTGCCACATGTCTATaGATGCTGGTTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLVATCL*MLVWSV
Trigger: CACAGACCAAACCAGCATCCATAGACATGTGGCAAC...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGCCACCATGGCAGTGCTaGATGACCTCAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLPPWQC*MTSVRM
Trigger: CATTCTTACTGAGGTCATCCAGCACTGCCATGGTGG...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGCGTATGTGTTTCTTaGAACCTGTGTGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPICVCVS*NLCDRD
Trigger: GTCCCTGTCACACAGGTTCCAAGAAACACATACGCA...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGAATTCTGGAAAACAGTaGGCTCCTCCTTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRNSGKQ*APPLLV
Trigger: GACCAGCAAAGGAGGAGCTCACTGTTTTCCAGAATT...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGACTGCTCCCCTTGTCTTaGCATGTGACACAACAGGCT +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRLLPLS*HVTQQA
Trigger: AGCCTGTTGTGTCACATGTCAAGACAAGGGGAGCAG...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGCTATGGATGCTGGTTTaGTCTGTGAATAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLLWMLV*SVNSCR
Trigger: TCGGCAGCTATTCACAGACCAAACCAGCATCCATAG...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CAA 72 bp GTGCTGACACAGAGCTGTCTGCCAGGCACAGATCCATaGGGGATCCTCCAGGTCATGGTAGCAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: VLTQSCLPGTDP*GILQVMVAVIK
Trigger: CTTTATTACTGCTACCATGACCTGGAGGATCCCCAATGGATCTGTGCCTGGCAGACAGCTCTGTGTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp CGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGGGCTTTGAGGTAGGCTaGACCCCGCTCACAGCGGAT +
Preference number: 4 (lower is better)
Translates to: RHGYVEGTLLKGSFHLQTGFEVG*TPLTAD
Trigger: ATCCGCTGTGAGCGGGGTTCAGCCTACCTCAAAGCC...CGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCATCTGCCTCTATCAGATaGGCTGCTGGTCTAGATCAG +
Preference number: 4 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLASASIR*AAGLDQ
Trigger: CTGATCTAGACCAGCAGCTCATCTGATAGAGGCAGA...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAAGAACTCCAGAGCACTaGGCAGAGAGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASRTPEH*AERLVM
Trigger: CATCACCAGCCTCTCTGCTCAGTGCTCTGGAGTTCT...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGTGCCAGGAGTCAACATaGGATTCCTTTTGCTGGATA +
Preference number: 4 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLCQEST*DSFCWI
Trigger: TATCCAGCAAAAGGAATCTCATGTTGACTCCTGGCA...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTGAGGTAGGCATCAGCATGTTGTGTTaGCACATGTCTATGGATGCT +
Preference number: 4 (lower is better)
Translates to: ATLELEHLLAHSLGFEVGISMLC*HMSMDA
Trigger: AGCATCCATAGACATGTGGCAACACAACATGCTGAT...GCCTACCTCAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAAATGTCACAGCCAGTTaGTTTAAAATAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: DRDMCLAHWPEDWAATMANVTAS*FKIEAV
Trigger: GACAGCTTCTATTTTAAAGCAACTGGCTGTGACATT...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCTCTCAAAGACTCTTTGAGGTaGTCAATGTCACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NPAHSGCPRYSTSALSSLKDSLR*SMSQPV
Trigger: AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTT...GAGAGAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAGAGCAGAGTTTATACTaGTCCCAGCGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASEQSLY*SQRAPQ
Trigger: CTGTGGAGCCCGCTGGGACCAGTATAAACTCTGCTC...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGAGGAATTGGGAAATCCTaGCCAAACCACCCCAAGATG +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRGIGKS*PNHPKM
Trigger: CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCC...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATTCGAATCTTGCCTGTaGGGTGCAGGTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASFESCL*GAGADT
Trigger: TGTGTCAGCACCTGCACCTCACAGGCAAGATTCGAA...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp TTGCTTCCACCAACTGTCCCATTGATTCCTTCTGCAGCAATTCGAATCTTGCCTTGTGGATGCCACCCTTaGGCTGGAACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLPPTVPLIPSAAIRILPCGCHP*AGTPPC
Trigger: GCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACA...AGGCAAGATTCGAATTGCTGCAGAAGGAATCAATGGGACAGTTGGTGGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp GCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCAATTCACAGAATCCCTaGAATCTATGTACCAATTCC +
Preference number: 4 (lower is better)
Translates to: AEPRSQRMPPVQYISTLFNSQNP*NLCTNS
Trigger: GGAATTGGTACATAGATTTCAGGGATTCTGTGAATT...GAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTCTCACCTATTTTCTGTaGTCTAGCATCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPILTYFL*SSIIQI
Trigger: GATTTGGATGATGCTAGAGCACAGAAAATAGGTGAG...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGAGTTTATACTGGTCCCAGCGGGCTCCACAGTATGAACACTCTGACACCACATATGCCACCCTTGAGCTaGAACACCTCCTTGCACACT +
Preference number: 4 (lower is better)
Translates to: RVYTGPSGLHSMNTLTPHMPPLS*NTSLHT
Trigger: AGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCAT...ATGTGGTGTCAGAGTGTTCATACTGTGGAGCCCGCTGGGACCAGTATAAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp GAGAGCAACCTTGATAACCGACTTCCAAATGTATCTGCGTTAACCACACATACAGTGAGGTGCAGGTGCTaGCACAGAGCTGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ESNLDNRLPNVSALTTHTVRCRC*HRAVCQ
Trigger: CTGGCAGACAGCTCTGTGTCAGCACCTGCACCTCAC...TGTATGTGTGGTTAACGCAGATACATTTGGAAGTCGGTTATCAAGGTTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGTTCAACCATACAGGTTaGAAATACAGTATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRFNHTG*KYSIGR
Trigger: CCTGCCAATACTGTATTTTCAACCTGTATGGTTGAA...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTCCCGCTCACAGCGGATaGCCCCGGTACAGTACATCA +
Preference number: 4 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLPAHSG*PRYSTS
Trigger: TGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGG...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCCCGCTCACAGCGGATaGCCCCGGTACAGTACATCA +
Preference number: 4 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSPAHSG*PRYSTS
Trigger: TGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGG...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATACAGGCTGTCGCACATaGTGCAAGAGTTCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNTGCRT*CKSSLG
Trigger: ACCTAGGGAACTCTTGCAGCATGTGCGACAGCCTGT...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTCCCTGTGACAGGGACATGTaGCTGGCACACTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WLFLQKQEVSPMHSLQIPCDRDM*LAHWPE
Trigger: TTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACA...GGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGAAATCTGTTGGTCTATaGATGGCTGCGTATGTGTTT +
Preference number: 4 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLKSVGL*MAAYVF
Trigger: AAACACATACGCAGCCATGCATAGACCAACAGATTT...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGAACACCTTTCTATATTaGACAGTGGGCAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRNTFLY*TVGKWL
Trigger: AAGCCATTTGCCCACTGTGCAATATAGAAAGGTGTT...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGCTTATATCAGGGAGCCAAGCAGACACGTCATGGCTATGTGGAAGGCACTCTTCAAGCAGACACGTCATaGCTATGTGGAAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SLYQGAKQTRHGYVEGTLQADTS*LCGRHS
Trigger: AGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTG...AAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCACTTTTACCGAGGGCCTaGGAAAATGCCAAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASLLPRA*ENAKGA
Trigger: AGCACCTTTGGCATTTTCCCAGGCCCTCGGTAAAAG...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341170.5
3UTR CAA 72 bp TTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTaGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: FLQKQEVSPMHS*QIPLRRETEVK
Trigger: CTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATTGGAAGAGTGTCCACTaGGGCTGCACATGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNWKSVH*GCTWPR
Trigger: CCTGGGCCATGTGCAGCCTCAGTGGACACTCTTCCA...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGGGCATCTGGTTTGGTTaGAACAGTGAAGCAGATATT +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQGIWFG*NSEADI
Trigger: AATATCTGCTTCACTGTTGCAACCAAACCAGATGCC...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CTTGCCATGCTTTCTCTGTATAGTCACCCCAAACCTACTTTTACCGAGGGCCTGCAGCTTTCATGTGTTTaGCACCAGGGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LAMLSLYSHPKPTFTEGLQLSCV*HQGRRS
Trigger: AGACCTTCTACCCTGGTGGCAAACACATGAAAGCTG...CAGGCCCTCGGTAAAAGTAGGTTTGGGGTGACTATACAGAGAAAGCATGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGACTTTTTAACATCATGTaGGTCTCTTGGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRLFNIM*VSWDPA
Trigger: TGCTGGATCCCAAGAGACGCACATGATGTTAAAAAG...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATCCTTCTTCACTGCCCTaGCCACTTATCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNPSSLP*PLISSS
Trigger: TGATGAGCTGATAAGTGGCCAGGGCAGTGAAGAAGG...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGCTTATATCAGGGAGCCAAGCAGACACGTCATGGCTATGTGGAAGGCACTCTTACCAACACGCAATTCTaGAAAACAGTGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLYQGAKQTRHGYVEGTLTNTQF*KTVSSS
Trigger: GGAGGAGCTCACTGTTTTCCAGAATTGCGTGTTGGT...AAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CCA 90 bp TGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTCCCTCTTCCAGGTACTTGTaGATGCCACCCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WLFLQKQEVSPMHSLQIPSSRYL*MPPLSW
Trigger: CCAGCTCAAGGGTGGCATCCACAAGTACCTGGAAGA...GGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCAGGCCTCCTGACTCCTaGGCTAGGGTTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSRPPDS*ARVLSA
Trigger: AGCTGAGAGAACCCTAGCCCAGGAGTCAGGAGGCCT...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR TCA 90 bp ACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGGTGAGGTGCAGGTGCTaGCACAGAGCTGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TEHSVHQKQTTSLCKSHQVRCRC*HRAVCQ
Trigger: CTGGCAGACAGCTCTGTGTCAGCACCTGCACCTCAC...CTGATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAAGCCCACTGTGGGACTTaGGTATGCATTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GIPCSSPIFCALASSKSEAHCGT*VCIGFL
Trigger: CAAAAACCCAATGCATACTCAAGTCCCACAGTGGGC...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGAAAGACTCTTTGCCTCCCCTTCTTCACTaGCCTGGCCACTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: VEGTLLKGSFHLQTKDSLPPLLH*PGHLSA
Trigger: AGCTGATAAGTGGCCAGGGCAGTGAAGAAGGGGAGG...CAAAGAGTCTTTCGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp ACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAGCCCGCTCACAGCGGATaGCCCCGGTACAGTACATCA +
Preference number: 4 (lower is better)
Translates to: TEHSVHQKQTTSLCKSHQPAHSG*PRYSTS
Trigger: TGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGG...CTGATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAAGCTTTGGGATCCCATaGAGCTCACCTATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASSFGIP*SSPIFC
Trigger: ACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCT...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATGTTGCCACATGTCTATaGATGCTGGTTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNVATCL*MLVWSV
Trigger: CACAGACCAAACCAGCATCCATAGACATGTGGCAAC...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GAGAGCAACCTTGATAACCGACTTCCAAATGTATCTGCGTTAACCACACATACACAGGCACAGATCCATTaGGGATCCTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ESNLDNRLPNVSALTTHTQAQIH*GSSRSW
Trigger: CCATGACCTGGAGGATCCCCAATGGATCTGTGCCTG...TGTATGTGTGGTTAACGCAGATACATTTGGAAGTCGGTTATCAAGGTTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGACAACCATCCCCATTTaGCTTCTCCTTAAAACACAA +
Preference number: 4 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQTTIPI*LLLKTQ
Trigger: TTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGT...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ACAGCTTGCAGATTCCCCTCAGGCGAGAGACAGAGGTTAAGGGTAGATGGCAGATTCTATATTGCACAGTaGGCAAATGGCTTATGTGAG +
Preference number: 4 (lower is better)
Translates to: TACRFPSGERQRLRVDGRFYIAQ*ANGLCE
Trigger: CTCACATAAGCCATTTGCCCACTGTGCAATATAGAA...TCTGCCATCTACCCTTAACCTCTGTCTCTCGCCTGAGGGGAATCTGCAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp GCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTGCTTTAAAATATTCGAATCTTGCCTGTaGGGTGCAGGTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: ADERLFEVLNVTASCFKIFESCL*GAGADT
Trigger: TGTGTCAGCACCTGCACCTCACAGGCAAGATTCGAA...TATTTTAAAGCAACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTGTGAATCCTTGTCCTTaGCAGGCAGGGCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLVNPCP*QAGQVK
Trigger: TTTGACCTGCCCTGCCTGTCAAGGACAAGGATTCAC...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGGCAGCGGCCAGAACTaGAGTTCCCGATTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSGSGQN*SSRFLC
Trigger: ACAGAGAAATCGGGAACTTCAGTTCTGGCCGCTGCC...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCAGGAATCGTCCTATTTTaGTTTCATAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLAGIVLF*FHRSFC
Trigger: GCAGAAACTTCTATGAAAGCAAAATAGGACGATTCC...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAGCCACAATGCCCTTGTaGCTTTTAATATACCACAGT +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASATMPL*LLIYHS
Trigger: ACTGTGGTATATTAAAAGGCACAAGGGCATTGTGGC...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TCTTTTCATCTGCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTCAAGCAGACACGTCATaGCTATGTGGAAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SFHLQTKDSLRCSMSQPVQADTS*LCGRHS
Trigger: AGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTG...AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGCAGGCACAGATCCATTaGGGATCCTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVQAQIH*GSSRSW
Trigger: CCATGACCTGGAGGATCCCCAATGGATCTGTGCCTG...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTATCCCTCAGCAGCTTTaGGATCCCATGCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSIPQQL*DPMQLT
Trigger: GGTGAGCTGCATGGGATCCCAAAGCTGCTGAGGGAT...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CTTGCCATGCTTTCTCTGTATAGTCACCCCAAACCTACTTTTACCGAGGGCCTGATCATGTGCGTCTCTTaGGATCCAGCAAAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: LAMLSLYSHPKPTFTEGLIMCVS*DPAKVL
Trigger: TAACACTTTTGCTGGATCCCAAGAGACGCACATGAT...CAGGCCCTCGGTAAAAGTAGGTTTGGGGTGACTATACAGAGAAAGCATGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TCTTTTCATCTGCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTCTCAGTAATGAGCACTaGCCTGTCTTCCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SFHLQTKDSLRCSMSQPVLSNEH*PVFPVS
Trigger: TGACACAGGGAAGACAGGCCAGTGCTCATTACTGAG...AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CCA 90 bp AGCTTATATCAGGGAGCCAAGCAGACACGTCATGGCTATGTGGAAGGCACTCTTCCACAGCTGGGAAAATaGTGGCACAATGTACTTATT +
Preference number: 4 (lower is better)
Translates to: SLYQGAKQTRHGYVEGTLPQLGK*WHNVLI
Trigger: AATAAGTACATTGTGCCACCATTTTCCCAGCTGTGG...AAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
3UTR CAA 72 bp AGTCTGGTAGCCAATTTGCTTCCACCAACTGTCCCATaGATTCCTTCTGCAGCAATTCGAATCTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLVANLLPPTVP*IPSAAIRILPV
Trigger: CACAGGCAAGATTCGAATTGCTGCAGAAGGAATCAATGGGACAGTTGGTGGAAGCAAATTGGCTACCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATCACCAACTGTCCCATTaGTTCCTTCTGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: RMVISTKAGGKPNAQLADHQLSH*FLLQQF
Trigger: GAATTGCTGCAGAAGGAATCAATGGGACAGTTGGTG...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATGGCAAATGGCTTATGTaGGGTAAGACACTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RMVISTKAGGKPNAQLADGKWLM*GKTLEG
Trigger: TCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCC...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGTGGTCTGTGAATAGCTaGCGACAGCATTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: RHGYVEGTLLKGSFHLQTWSVNS*RQHFHN
Trigger: ATTGTGGAAATGCTGTCGGCAGCTATTCACAGACCA...CGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAACCCATTGATTCCTTCTaGAGCAATTCGAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: GIPCSSPIFCALASSKSEPIDSF*SNSNLA
Trigger: GGCAAGATTCGAATTGCTGCAGAAGGAATCAATGGG...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTCCCTCTGCAGTCTTGCCATaGTTTCTCTGTATAGTCACC +
Preference number: 4 (lower is better)
Translates to: WLFLQKQEVSPMHSLQIPSAVLP*FLCIVT
Trigger: GGTGACTATACAGAGAAAGCATGGCAAGACTGCAGA...GGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTCTCTATCAGATGAGCTaGTGGTCTAGATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLLYQMS*WSRSGA
Trigger: AGCCCCTGATCTAGACCAGCAGCTCATCTGATAGAG...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TCATCAGCATGTTGTGTTGCCACATGTCTATGGATGCTGGTTTGGTCTGTGAATTCCAGGTCATCTCCTTaGTCTGGTGAAGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSACCVATCLWMLVWSVNSRSSP*SGEVEE
Trigger: TTCTTCCACTTCACCAGACCAAGGAGATGACCTGGA...ATTCACAGACCAAACCAGCATCCATAGACATGTGGCAACACAACATGCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CCA 90 bp TCTTTTCATCTGCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTGGGGCTAAGCAGCCTTaGAATCGTCCTATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SFHLQTKDSLRCSMSQPVGAKQP*NRPILL
Trigger: AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCC...AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTATGCCACCCTTGAGCTaGAACACCTCCTTGCACACT +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSMPPLS*NTSLHT
Trigger: AGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCAT...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CTTGCCATGCTTTCTCTGTATAGTCACCCCAAACCTACTTTTACCGAGGGCCTGTATACTCAGGCGTTCTaGAACTATCCTCCATGTATA +
Preference number: 4 (lower is better)
Translates to: LAMLSLYSHPKPTFTEGLYTQAF*NYPPCI
Trigger: TATACATGGAGGATAGTTCCAGAACGCCTGAGTATA...CAGGCCCTCGGTAAAAGTAGGTTTGGGGTGACTATACAGAGAAAGCATGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAGACTTGAGTATGCATTaGGTTTTTGTATACTCAGGC +
Preference number: 4 (lower is better)
Translates to: LSSFGIPCSSPIFCALASDLSMH*VFVYSG
Trigger: GCCTGAGTATACAAAAACCCAATGCATACTCAAGTC...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTATCAGATGAGCTGCTaGTCTAGATCAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVYQMSC*SRSGAG
Trigger: GCCAGCCCCTGATCTAGACCAGCAGCTCATCTGATA...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATCAGATATCAAGGAATTaGGAAATCCTGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNQISRN*EILAKP
Trigger: TGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTG...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCGCAAAGGCCTTGAGCTaGAGAGCAACCTTGATAACC +
Preference number: 4 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPAKALS*RATLIT
Trigger: GGTTATCAAGGTTGCTCTCCAGCTCAAGGCCTTTGC...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATTGCTGGTTTGGTCTGTaGATAGCTGCCGACAGCATT +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNCWFGL*IAADSI
Trigger: AATGCTGTCGGCAGCTATTCACAGACCAAACCAGCA...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCCACCAACTGTCCCATTaGTTCCTTCTGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPHQLSH*FLLQQF
Trigger: GAATTGCTGCAGAAGGAATCAATGGGACAGTTGGTG...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCAATTCTGGAAAACAGTaGGCTCCTCCTTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSNSGKQ*APPLLV
Trigger: GACCAGCAAAGGAGGAGCTCACTGTTTTCCAGAATT...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp AGCTTATATCAGGGAGCCAAGCAGACACGTCATGGCTATGTGGAAGGCACTCTTGCACTCTCTTCTCTCTaGAAAGTTCTAGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLYQGAKQTRHGYVEGTLALSSL*KVLDFC
Trigger: ACAAAAATCTAGAACTTTTCAGAGAGAAGAGAGTGC...AAGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTGGCTCCCTGATATAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATCCCTCCTTGGAATTTTaGAAACCTCGATTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNPSLEF*KPRLKL
Trigger: CAACTTTAATCGAGGTTTTCAAAATTCCAAGGAGGG...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCCCTAGCAATTGTCACTaGTCACCGCCCTCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCPSNCH*SPPSSL
Trigger: TAGGCTCGAGGGCGGTGAGCAGTGACAATTGCTAGG...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAAATCAGCATGTTGTGTTaGCACATGTCTATGGATGCT +
Preference number: 4 (lower is better)
Translates to: GIPCSSPIFCALASSKSEISMLC*HMSMDA
Trigger: AGCATCCATAGACATGTGGCAACACAACATGCTGAT...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTGGTCTATGCATGGCTaGGTATGTGTTTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RMVISTKAGGKPNAQLADWSMHG*VCVSWN
Trigger: GTTCCAAGAAACACATACGCAGCCATGCATAGACCA...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTCCCTCCTTAAAACACAATTaGAGCTGCATTCTGCATCGC +
Preference number: 4 (lower is better)
Translates to: WLFLQKQEVSPMHSLQIPSLKHN*SCILHR
Trigger: GCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGA...GGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATGTGGAAGAAGGCATCTaGTTTGGTTGCAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: RMVISTKAGGKPNAQLADVEEGI*FGCNSE
Trigger: TTCACTGTTGCAACCAAACCAGATGCCTTCTTCCAC...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGAAAGACTCTTTGCTATGGATGCTGGTTTaGTCTGTGAATAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VEGTLLKGSFHLQTKDSLLWMLV*SVNSCR
Trigger: TCGGCAGCTATTCACAGACCAAACCAGCATCCATAG...CAAAGAGTCTTTCGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp GAGAGCAACCTTGATAACCGACTTCCAAATGTATCTGCGTTAACCACACATACAGTTGCCACATGTCTATaGATGCTGGTTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ESNLDNRLPNVSALTTHTVATCL*MLVWSV
Trigger: CACAGACCAAACCAGCATCCATAGACATGTGGCAAC...TGTATGTGTGGTTAACGCAGATACATTTGGAAGTCGGTTATCAAGGTTGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATCAAGCAGACACGTCATaGCTATGTGGAAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNQADTS*LCGRHS
Trigger: AGAGTGCCTTCCACATAGCCATGACGTGTCTGCTTG...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp TGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAACAGGCACAGATCCATTaGGGATCCTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: CCRTEHSVHQKQTTSLCKQAQIH*GSSRSW
Trigger: CCATGACCTGGAGGATCCCCAATGGATCTGTGCCTG...TTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAAATGCCACCCTTGAGCTaGAACACCTCCTTGCACACT +
Preference number: 4 (lower is better)
Translates to: KFTESLKSMYQFQVKSPEMPPLS*NTSLHT
Trigger: AGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCAT...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CCA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAATCTTCCAGGTACTTGTaGATGCCACCCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KFTESLKSMYQFQVKSPESSRYL*MPPLSW
Trigger: CCAGCTCAAGGGTGGCATCCACAAGTACCTGGAAGA...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CCA 90 bp TGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAGAGCAGAGTTTATACTaGTCCCAGCGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: CCRTEHSVHQKQTTSLCKEQSLY*SQRAPQ
Trigger: CTGTGGAGCCCGCTGGGACCAGTATAAACTCTGCTC...TTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCACGAGCTGGCGGCACTaGGGAGTAGAGCAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCTSWRH*GVEQSL
Trigger: TAAACTCTGCTCTACTCCCCAGTGCCGCCAGCTCGT...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATTGCTCACATAAGCACTaGCCCATCCTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNCSHKH*PILISI
Trigger: GATGCTGATGAGGATGGGCCAGTGCTTATGTGAGCA...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATGTTTGGTTGCAACAGTaGAGCAGATATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RMVISTKAGGKPNAQLADVWLQQ*SRYSFQ
Trigger: CTGAAAGGAATATCTGCTTCACTGTTGCAACCAAAC...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGTCACCGAGCTTATATaGAGCTCCCAGAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNVTELI*SSQREH
Trigger: ATGTTCTCTCTGGGAGCTTCATATAAGCTCGGTGAC...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TCATCAGCATGTTGTGTTGCCACATGTCTATGGATGCTGGTTTGGTCTGTGAATGGCATCTGGTTTGGTTaGAACAGTGAAGCAGATATT +
Preference number: 4 (lower is better)
Translates to: SSACCVATCLWMLVWSVNGIWFG*NSEADI
Trigger: AATATCTGCTTCACTGTTGCAACCAAACCAGATGCC...ATTCACAGACCAAACCAGCATCCATAGACATGTGGCAACACAACATGCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR GCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTGGTCTGTGAATAGCTaGCGACAGCATTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLWSVNS*RQHFHN
Trigger: ATTGTGGAAATGCTGTCGGCAGCTATTCACAGACCA...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp ACAAAAAGGGCAAAGGCCTTGAGCTGGAGAGCAACCTTGATAACCGACTTCCAAAATGTCACAGCCAGTTaGTTTAAAATAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKRAKALSWRATLITDFQNVTAS*FKIEAV
Trigger: GACAGCTTCTATTTTAAAGCAACTGGCTGTGACATT...TTGGAAGTCGGTTATCAAGGTTGCTCTCCAGCTCAAGGCCTTTGCCCTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAATCTTTAAAGCTGTCTTaGATAGGGCCTGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: GIPCSSPIFCALASSKSESLKLS*IGPETF
Trigger: GAAAGTTTCAGGCCCTATGCAAGACAGCTTTAAAGA...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGGCTGTCGCACATGCTaGAAGAGTTCCCTAGGTATG +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCGCRTC*KSSLGM
Trigger: CATACCTAGGGAACTCTTGCAGCATGTGCGACAGCC...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTAGCTCAGAGAGTAAGTaGTGGGGAAAGCAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSSSESK*WGKQSY
Trigger: ATAGCTCTGCTTTCCCCAGCACTTACTCTCTGAGCT...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTCCAGGTCATCTCCTTaGTCTGGTGAAGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVSRSSP*SGEVEE
Trigger: TTCTTCCACTTCACCAGACCAAGGAGATGACCTGGA...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGGGGGCTAAGCAGCCTTaGAATCGTCCTATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVGAKQP*NRPILL
Trigger: AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCC...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCGGGGCTAAGCAGCCTTaGAATCGTCCTATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GQSIAFIKNKQLPFVKAIGAKQP*NRPILL
Trigger: AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCC...GATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGGATGCCGGACAATGGTaGAGAAACTCCAGATATCAA +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVDAGQW*RNSRYQ
Trigger: TTGATATCTGGAGTTTCTTCACCATTGTCCGGCATC...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTAAAGACTCTTTGAGGTaGTCAATGTCACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KPTFHYQSQATNMSLSVLKDSLR*SMSQPV
Trigger: AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTT...AAGAACACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCCCCATTGATTCCTTCTaGAGCAATTCGAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: GQSIAFIKNKQLPFVKAIPIDSF*SNSNLA
Trigger: GGCAAGATTCGAATTGCTGCAGAAGGAATCAATGGG...GATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR GCA 90 bp TTGCTTCCACCAACTGTCCCATTGATTCCTTCTGCAGCAATTCGAATCTTGCCTGGAATCGTCCTATTTTaGTTTCATAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLPPTVPLIPSAAIRILPGIVLF*FHRSFC
Trigger: GCAGAAACTTCTATGAAAGCAAAATAGGACGATTCC...AGGCAAGATTCGAATTGCTGCAGAAGGAATCAATGGGACAGTTGGTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR GCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCAAATGCCAAAGGTGCTaGTCACATAAGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCKCQRC*SHKHWP
Trigger: GGGCCAGTGCTTATGTGAGCAGCACCTTTGGCATTT...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp CTTCTTTATGAAATTCACCTGGGGATAAATGGATTCCAGGCTTCTTGTAGGAGAGTGGAAGAAGGCATCTaGTTTGGTTGCAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LLYEIHLGINGFQASCRRVEEGI*FGCNSE
Trigger: TTCACTGTTGCAACCAAACCAGATGCCTTCTTCCAC...TCTCCTACAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CCA 90 bp TGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAACCTTCTTCACTGCCCTaGCCACTTATCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: CCRTEHSVHQKQTTSLCKPSSLP*PLISSS
Trigger: TGATGAGCTGATAAGTGGCCAGGGCAGTGAAGAAGG...TTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATCGAAACCTGCGTACATaGAGGGCTGATTTATCACAT +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNRNLRT*RADLSH
Trigger: ATGTGATAAATCAGCCCTCCATGTACGCAGGTTTCG...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGCTGTTGGTCTATGCATaGCTGCGTATGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVLLVYA*LRMCFL
Trigger: CAAGAAACACATACGCAGCCATGCATAGACCAACAG...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CCA 90 bp GAAGTTTCTGCAATCAAGAAGGATAGTATCACTTTGTTCTTGATTTGCCTGAGAGCAAAGGCCTTGAGCTaGAGAGCAACCTTGATAACC +
Preference number: 4 (lower is better)
Translates to: EVSAIKKDSITLFLICLRAKALS*RATLIT
Trigger: GGTTATCAAGGTTGCTCTCCAGCTCAAGGCCTTTGC...TCTCAGGCAAATCAAGAACAAAGTGATACTATCCTTCTTGATTGCAGAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CCA 90 bp GAAGTTTCTGCAATCAAGAAGGATAGTATCACTTTGTTCTTGATTTGCCTGAGATCTCAGCTCCACAGCTaGGAAAATGGTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: EVSAIKKDSITLFLICLRSQLHS*ENGGTM
Trigger: CATTGTGCCACCATTTTCCCAGCTGTGGAGCTGAGA...TCTCAGGCAAATCAAGAACAAAGTGATACTATCCTTCTTGATTGCAGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR TCA 90 bp CTTCTTTATGAAATTCACCTGGGGATAAATGGATTCCAGGCTTCTTGTAGGAGAGTTTGGTTGCAACAGTaGAGCAGATATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LLYEIHLGINGFQASCRRVWLQQ*SRYSFQ
Trigger: CTGAAAGGAATATCTGCTTCACTGTTGCAACCAAAC...TCTCCTACAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR TCA 90 bp GCAGACGAAAGACTCTTTGAGGTGCTCAATGTCACAGCCAGTTGCTTTAAAATATATTGTGAATCCTACTaGAGACAAAGTCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: ADERLFEVLNVTASCFKIYCESY*RQSHRY
Trigger: GTACCTGTGACTTTGTCTTCAGTAGGATTCACAATA...TATTTTAAAGCAACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp CTTCTTTATGAAATTCACCTGGGGATAAATGGATTCCAGGCTTCTTGTAGGAGAAAAGACTCTTTGAGGTaGTCAATGTCACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLYEIHLGINGFQASCRRKDSLR*SMSQPV
Trigger: AACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTT...TCTCCTACAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR GCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGGAAAATGCCAAAGGTaGTGCTCACATAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCGKCQR*CSHKHW
Trigger: CCAGTGCTTATGTGAGCAGCACCTTTGGCATTTTCC...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATCGATTTCTCTGTTTCTaGAGTCTTGCCATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNRFLCF*SLAMLS
Trigger: AGAAAGCATGGCAAGACTGCAGAAACAGAGAAATCG...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTACTTCCAAATGTATCTaGGTTAACCACACATACATG +
Preference number: 4 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSTSKCI*VNHTYM
Trigger: CATGTATGTGTGGTTAACGCAGATACATTTGGAAGT...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR GCA 90 bp GAGAGCAACCTTGATAACCGACTTCCAAATGTATCTGCGTTAACCACACATACAAGTGAACTGACAATGTaGTTCATTTCAGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ESNLDNRLPNVSALTTHTSELTM*FISVWA
Trigger: AGCCCAAACTGAAATGAAGCACATTGTCAGTTCACT...TGTATGTGTGGTTAACGCAGATACATTTGGAAGTCGGTTATCAAGGTTGCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp AATCCTACTGAAGACAAAGTCACAGGTACATTAATACAACTGGTACTTTGTTGCTCCCTGCTTATTCAGTaGTCAGTAATGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: NPTEDKVTGTLIQLVLCCSLLIQ*SVMSTG
Trigger: GCCAGTGCTCATTACTGAGCACTGAATAAGCAGGGA...GCAACAAAGTACCAGTTGTATTAATGTACCTGTGACTTTGTCTTCAGTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CCA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCACCAACACGCAATTCTaGAAAACAGTGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLKCSISTAARSLFNIMCTNTQF*KTVSSS
Trigger: GGAGGAGCTCACTGTTTTCCAGAATTGCGTGTTGGT...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTAGAGACTTCAGCTACTaGTCTCATCACTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSRDFSY*SHHLLD
Trigger: GTCTAATAAGTGATGAGATCAGTAGCTGAAGTCTCT...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp CCACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCAGAAAATCTTAAAATaGAGTTCTCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: PHHCCRTEHSVHQKQTTSQKILK*SSPGHL
Trigger: GAGATGACCTGGAGAACTGCATTTTAAGATTTTCTG...GGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR GCA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCACTTCCAAATGTATCTaGGTTAACCACACATACATG +
Preference number: 4 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPTSKCI*VNHTYM
Trigger: CATGTATGTGTGGTTAACGCAGATACATTTGGAAGT...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
3UTR CAA 72 bp TTAAAGGGTTCTTTTCATCTGCAGACGAAAGACTCTTaGAGGTGCTCAATGTCACAGCCAGTTGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LKGSFHLQTKDS*RCSMSQPVALK
Trigger: TTTTAAAGCAACTGGCTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTGCAGATGAAAAGAACCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGCACTCTCTTCTCTCTaGAAAGTTCTAGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSALSSL*KVLDFC
Trigger: ACAAAAATCTAGAACTTTTCAGAGAGAAGAGAGTGC...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR TCA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGTTAAAGTTGCCAAATTaGTTACTGGATCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVLKLPN*LLDPEH
Trigger: GTGTTCTGGATCCAGTAATCAATTTGGCAACTTTAA...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTCAGAAAATCTTAAAATaGAGTTCTCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSQKILK*SSPGHL
Trigger: GAGATGACCTGGAGAACTGCATTTTAAGATTTTCTG...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR GCA 90 bp AATCCTACTGAAGACAAAGTCACAGGTACATTAATACAACTGGTACTTTGTTGCATCAGCATGTTGTGTTaGCACATGTCTATGGATGCT +
Preference number: 4 (lower is better)
Translates to: NPTEDKVTGTLIQLVLCCISMLC*HMSMDA
Trigger: AGCATCCATAGACATGTGGCAACACAACATGCTGAT...GCAACAAAGTACCAGTTGTATTAATGTACCTGTGACTTTGTCTTCAGTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp GGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAATGTCACAGCCAGTTaGTTTAAAATAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQSIAFIKNKQLPFVKAINVTAS*FKIEAV
Trigger: GACAGCTTCTATTTTAAAGCAACTGGCTGTGACATT...GATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp GAAGTTTCTGCAATCAAGAAGGATAGTATCACTTTGTTCTTGATTTGCCTGAGAGCACTCTCTTCTCTCTaGAAAGTTCTAGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: EVSAIKKDSITLFLICLRALSSL*KVLDFC
Trigger: ACAAAAATCTAGAACTTTTCAGAGAGAAGAGAGTGC...TCTCAGGCAAATCAAGAACAAAGTGATACTATCCTTCTTGATTGCAGAAACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR TCA 90 bp AATCCTACTGAAGACAAAGTCACAGGTACATTAATACAACTGGTACTTTGTTGCTCTAGAATAGTGAACTaGCAATGTGCTTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NPTEDKVTGTLIQLVLCCSRIVN*QCASFQ
Trigger: CTGAAATGAAGCACATTGTCAGTTCACTATTCTAGA...GCAACAAAGTACCAGTTGTATTAATGTACCTGTGACTTTGTCTTCAGTAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR GCA 90 bp ATATCAACTCTTAGTGGTGGGCCTAATAACTATTTTCATTTTGAAGCAGTGATGGGAATCGTCCTATTTTaGTTTCATAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ISTLSGGPNNYFHFEAVMGIVLF*FHRSFC
Trigger: GCAGAAACTTCTATGAAAGCAAAATAGGACGATTCC...CATCACTGCTTCAAAATGAAAATAGTTATTAGGCCCACCACTAAGAGTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS CCA 90 bp ACCGAGGGCCTGGGAAAATGCCAAAGGTGCTGCTCACATAAGCACTaGCCCATCCTCATCAGCATCAGGCCCTGGCTCTGGGCTCACAGG +
Preference number: 5 (lower is better)
Translates to: TEGLGKCQRCCSHKH*PILISIRPWLWAHR
Trigger: CCTGTGAGCCCAGAGCCAGGGCCTGATGCTGATGAGGATGGGCCAGTGCTTATGTGAGCAGCACCTTTGGCATTTTCCCAGGCCCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS-3UTR CAA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCATTGTGGATGCCACCCTaGAGCTGGAACACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DRDMCLAHWPEDWAATMALWMPP*SWNTSL
Trigger: CAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAA...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGAGCCCAATGCACAGCTaGCAGATTCCCCTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LHMAQEWHHVAGTTIPIWSPMHS*QIPLRR
Trigger: TCGCCTGAGGGGAATCTGCAAGCTGTGCATTGGGCT...CCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGGCAAGTCTGGTAGCCAATTaGCTTCCACCAACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: DRDMCLAHWPEDWAATMASLVAN*LPPTVP
Trigger: TGGGACAGTTGGTGGAAGCAAATTGGCTACCAGACT...TGCCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTACAGGCTGTGAATCCTaGTCCTTGACAGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPITGCES*SLTGRA
Trigger: TGCCCTGCCTGTCAAGGACAAGGATTCACAGCCTGT...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GCTGAACCCCGCTCACAGCGGATGCCCCCGGTACAGTACATCAGCACTCTCTTCAAAAGGGCAAAGGCCTaGAGCTGGAGAGCAACCTTG +
Preference number: 5 (lower is better)
Translates to: AEPRSQRMPPVQYISTLFKRAKA*SWRATL
Trigger: CAAGGTTGCTCTCCAGCTCAAGGCCTTTGCCCTTTT...GAAGAGAGTGCTGATGTACTGTACCGGGGGCATCCGCTGTGAGCGGGGTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS CCA 90 bp GCTCACAGGCTGTCGCACATGCTGCAAGAGTTCCCTAGGTATGCGTaGCCGTCGGGCTGTGCACTCGCATTCCTCTTTAAAGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: AHRLSHMLQEFPRYA*PSGCALAFLFKAVL
Trigger: CAAGACAGCTTTAAAGAGGAATGCGAGTGCACAGCCCGACGGCCACGCATACCTAGGGAACTCTTGCAGCATGTGCGACAGCCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS CCA 90 bp TCACATAAGCACTGGCCCATCCTCATCAGCATCAGGCCCTGGCTCTaGGCTCACAGGCTGTCGCACATGCTGCAAGAGTTCCCTAGGTAT +
Preference number: 5 (lower is better)
Translates to: SHKHWPILISIRPWL*AHRLSHMLQEFPRY
Trigger: ATACCTAGGGAACTCTTGCAGCATGTGCGACAGCCTGTGAGCCCAGAGCCAGGGCCTGATGCTGATGAGGATGGGCCAGTGCTTATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS-3UTR CAA 90 bp CAGGTAAGTGGTAGACAACGTGACTCCTCCCCTCCCGCTGTGAAGTGTAGACGGGCAGCAATTCGAATCTaGCCTGTGAGGTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QVSGRQRDSSPPAVKCRRAAIRI*PVRCRC
Trigger: GCACCTGCACCTCACAGGCAAGATTCGAATTGCTGC...CCGTCTACACTTCACAGCGGGAGGGGAGGAGTCACGTTGTCTACCACTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS GCA 90 bp CCCAAACCTACTTTTACCGAGGGCCTGGGAAAATGCCAAAGGTGCTaGTCACATAAGCACTGGCCCATCCTCATCAGCATCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PKPTFTEGLGKCQRC*SHKHWPILISIRPW
Trigger: CCAGGGCCTGATGCTGATGAGGATGGGCCAGTGCTTATGTGAGCAGCACCTTTGGCATTTTCCCAGGCCCTCGGTAAAAGTAGGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS-3UTR CAA 90 bp TGTGAGGTGCAGGTGCTGACACAGAGCTGTCTGCCAGGCACAGATCCATTGGGGCATCAGCATGTTGTGTaGCCACATGTCTATGGATGC +
Preference number: 5 (lower is better)
Translates to: CEVQVLTQSCLPGTDPLGHQHVV*PHVYGC
Trigger: GCATCCATAGACATGTGGCAACACAACATGCTGATG...CCCCAATGGATCTGTGCCTGGCAGACAGCTCTGTGTCAGCACCTGCACCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTAACTCTTCCAGGTACTaGTGGATGCCACCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LVDATLELEHLLAHSLGFNSSRY*WMPPLS
Trigger: GCTCAAGGGTGGCATCCACAAGTACCTGGAAGAGTT...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp AGGTACTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGAGTCTGGTAGCCAATTaGCTTCCACCAACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RYLWMPPLSWNTSLHTPLSLVAN*LPPTVP
Trigger: TGGGACAGTTGGTGGAAGCAAATTGGCTACCAGACT...CAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CAA 90 bp AGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTCTCCTTAAAACACAATaGCAGCTGCATTCTGCATCG +
Preference number: 5 (lower is better)
Translates to: RLHMAQEWHHVAGTTIPILLKTQ*QLHSAS
Trigger: CGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAG...AATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGGGCCATGTGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CTTGTGGATGCCACCCTTGAGCTGGAACACCTCCTTGCACACTCCCTTGGCTTTCAGACGAAAGACTCTTaGAGGTGCTCAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: LVDATLELEHLLAHSLGFQTKDS*RCSMSQ
Trigger: CTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTG...AAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGGGCCCACTGTGGGACTaGAGTATGCATTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQGPLWD*SMHWVF
Trigger: AAAAACCCAATGCATACTCAAGTCCCACAGTGGGCC...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGCACTTATTAGACAAATaGCTGCTGACCTTACGCCTG +
Preference number: 5 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLHLLDK*LLTLRL
Trigger: CAGGCGTAAGGTCAGCAGCAATTTGTCTAATAAGTG...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS TCA 90 bp GGCTGTGCACTCGCATTCCTCTTTAAAGCTGTCTTGCATAGGGCCTaGAACTTTCCTGCTCCCCTTGTCTTGACATGTGACACAACAGGC +
Preference number: 5 (lower is better)
Translates to: GCALAFLFKAVLHRA*NFPAPLVLTCDTTG
Trigger: GCCTGTTGTGTCACATGTCAAGACAAGGGGAGCAGGAAAGTTTCAGGCCCTATGCAAGACAGCTTTAAAGAGGAATGCGAGTGCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS-3UTR CAA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACATCAGCATGTTGTGTaGCCACATGTCTATGGATGC +
Preference number: 5 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLAHQHVV*PHVYGC
Trigger: GCATCCATAGACATGTGGCAACACAACATGCTGATG...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAACCAGGCACAGATCCATaGGGGATCCTCCAGGTCATG +
Preference number: 5 (lower is better)
Translates to: GIPCSSPIFCALASSKSEPGTDP*GILQVM
Trigger: CATGACCTGGAGGATCCCCAATGGATCTGTGCCTGG...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACCAGATATCAAGGAATaGGGAAATCCTGGCCAAACC +
Preference number: 5 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLAPDIKE*GNPGQT
Trigger: GGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGG...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CACTCCCAGGGCCACAGCTTTCATGTGTTTGCCACCAGGGTAGAAGGTCTGCTGAAACACCTTTCTATATaGCACAGTGGGCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: HSQGHSFHVFATRVEGLLKHLSI*HSGQMA
Trigger: AGCCATTTGCCCACTGTGCAATATAGAAAGGTGTTT...CAGCAGACCTTCTACCCTGGTGGCAAACACATGAAAGCTGTGGCCCTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCATCCAAATCAGAACCTGCTCCCCTTGTCTaGACATGTGACACAACAGGC +
Preference number: 5 (lower is better)
Translates to: GIPCSSPIFCALASSKSEPAPLV*TCDTTG
Trigger: GCCTGTTGTGTCACATGTCAAGACAAGGGGAGCAGG...TTCTGATTTGGATGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTTCCCCCGCCGCGTATTaGGGTAGAAAAGCTCGCTCG +
Preference number: 5 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSSPAAY*GRKARS
Trigger: CGAGCGAGCTTTTCTACCCAAATACGCGGCGGGGGA...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGCAATTCGAATCTaGCCTGTGAGGTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSAAIRI*PVRCRC
Trigger: GCACCTGCACCTCACAGGCAAGATTCGAATTGCTGC...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CAA 90 bp GCAGACACGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTAGCTGGAACACCTCCTaGCACACTCCCTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ADTSWLCGRHSFKGFFSSSWNTS*HTPLAL
Trigger: CAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCT...AGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACGTGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CTGAATTTCCTGATGTCTGGGGCTAAGCAGCCTTGGAATCGTCCTATTTTGCTTAACTCTTCCAGGTACTaGTGGATGCCACCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LNFLMSGAKQPWNRPILLNSSRY*WMPPLS
Trigger: GCTCAAGGGTGGCATCCACAAGTACCTGGAAGAGTT...AAGCAAAATAGGACGATTCCAAGGCTGCTTAGCCCCAGACATCAGGAAATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CACATCACTGTTGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCCCAGTAGTACAGCTCTaGGCAGGTAGACAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: HITVVGQSIAFIKNKQLPPVVQL*AGRQAG
Trigger: GCCTGCCTGTCTACCTGCCAAGAGCTGTACTACTGG...GGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACAACAGTGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CAA 90 bp GGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACACAATAAGAAGGCATCTGGTTaGGTTGCAACAGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GTMLQGQPSPFGFSLKHNKKASG*VATVKQ
Trigger: CTGCTTCACTGTTGCAACCAAACCAGATGCCTTCTT...ATTGTGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CATGGCTGCGTATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCAAATTTCATCAGCATGTaGTGTTGCCACATGTCTATG +
Preference number: 5 (lower is better)
Translates to: HGCVCVSWNLCDRDMCLANFISM*CCHMSM
Trigger: CATAGACATGTGGCAACACAACATGCTGATGAAATT...TGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATACGCAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GAGAGCAACCTTGATAACCGACTTCCAAATGTATCTGCGTTAACCACACATACATTGTGGATGCCACCCTaGAGCTGGAACACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ESNLDNRLPNVSALTTHTLWMPP*SWNTSL
Trigger: CAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAA...TGTATGTGTGGTTAACGCAGATACATTTGGAAGTCGGTTATCAAGGTTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAGTATGCATTGGGTTTTaGTATACTCAGGCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSSFGIPCSSPIFCALASVCIGF*YTQAFW
Trigger: CCAGAACGCCTGAGTATACAAAAACCCAATGCATAC...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CGTCATGGCTATGTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGAAGAAGGCATCTGGTTaGGTTGCAACAGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RHGYVEGTLLKGSFHLQTKKASG*VATVKQ
Trigger: CTGCTTCACTGTTGCAACCAAACCAGATGCCTTCTT...CGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCACATAGCCATGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CAA 90 bp TGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATTCCCCAGACGAAAGACTCTTaGAGGTGCTCAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: WLFLQKQEVSPMHSLQIPQTKDS*RCSMSQ
Trigger: CTGTGACATTGAGCACCTCAAAGAGTCTTTCGTCTG...GGGAATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp TGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCCAGGCACAGATCCATaGGGGATCCTCCAGGTCATG +
Preference number: 5 (lower is better)
Translates to: CRTEHSVHQKQTTSLCKSPGTDP*GILQVM
Trigger: CATGACCTGGAGGATCCCCAATGGATCTGTGCCTGG...GCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTAGCTGGAACACCTCCTaGCACACTCCCTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSSWNTS*HTPLAL
Trigger: CAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCT...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CTTCTTTATGAAATTCACCTGGGGATAAATGGATTCCAGGCTTCTTGTAGGAGAAGCTGGAACACCTCCTaGCACACTCCCTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LLYEIHLGINGFQASCRRSWNTS*HTPLAL
Trigger: CAAAGCCAAGGGAGTGTGCAAGGAGGTGTTCCAGCT...TCTCCTACAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CAA 90 bp TATGTGTTTCTTGGAACCTGTGTGACAGGGACATGTGCCTGGCACACTGGCCAGTTTCAACCATACAGGTaGAAAATACAGTATTGGCAG +
Preference number: 5 (lower is better)
Translates to: YVFLGTCVTGTCAWHTGQFQPYR*KIQYWQ
Trigger: CTGCCAATACTGTATTTTCAACCTGTATGGTTGAAA...CTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAGGTTCCAAGAAACACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp AATCCTACTGAAGACAAAGTCACAGGTACATTAATACAACTGGTACTTTGTTGCCCAGGCACAGATCCATaGGGGATCCTCCAGGTCATG +
Preference number: 5 (lower is better)
Translates to: NPTEDKVTGTLIQLVLCCPGTDP*GILQVM
Trigger: CATGACCTGGAGGATCCCCAATGGATCTGTGCCTGG...GCAACAAAGTACCAGTTGTATTAATGTACCTGTGACTTTGTCTTCAGTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CAA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAATTGTGGATGCCACCCTaGAGCTGGAACACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KFTESLKSMYQFQVKSPELWMPP*SWNTSL
Trigger: CAAGGAGGTGTTCCAGCTCAAGGGTGGCATCCACAA...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CAA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATAACTCTTCCAGGTACTaGTGGATGCCACCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNNSSRY*WMPPLS
Trigger: GCTCAAGGGTGGCATCCACAAGTACCTGGAAGAGTT...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp TTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTTGTGAATCCTTGTCCTaGACAGGCAGGGCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: FQKPTFHYQSQATNMSLSCESLS*TGRAGQ
Trigger: TTGACCTGCCCTGCCTGTCAAGGACAAGGATTCACA...ACTCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp AGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATGCACAGCTTGCAGATGGAACTTCTTTGGTTTaGACAAAAAGGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: RMVISTKAGGKPNAQLADGTSLV*TKRAKA
Trigger: GGCCTTTGCCCTTTTTGTCAAAACCAAAGAAGTTCC...ATCTGCAAGCTGTGCATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp CTCAGCAGCTTTGGGATCCCATGCAGCTCACCTATTTTCTGTGCTCTAGCATCAATAATATTAAATCTGTaGGTCTATGCATGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: LSSFGIPCSSPIFCALASIILNL*VYAWLR
Trigger: ACGCAGCCATGCATAGACCAACAGATTTAATATTAT...TGATGCTAGAGCACAGAAAATAGGTGAGCTGCATGGGATCCCAAAGCTGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp TGTAGGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCAAAAGGGCAAAGGCCTaGAGCTGGAGAGCAACCTTG +
Preference number: 5 (lower is better)
Translates to: CRTEHSVHQKQTTSLCKSKRAKA*SWRATL
Trigger: CAAGGTTGCTCTCCAGCTCAAGGCCTTTGCCCTTTT...GCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CTCCATGTATACCAAAGGATGGTTATTTCTACAAAAGCAGGAGGTAAGCCCAATCATCATGTGCGTCTCTaGGGATCCAGCAAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LHVYQRMVISTKAGGKPNHHVRL*GSSKSV
Trigger: AACACTTTTGCTGGATCCCAAGAGACGCACATGATG...ATTGGGCTTACCTCCTGCTTTTGTAGAAATAACCATCCTTTGGTATACATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp GTGGAAGGCACTCTTTTAAAGGGTTCTTTTCATCTGCAGACGAAAGACTCTTTGTTTGTTGGAACTTCTTaGGTTTTGACAAAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: VEGTLLKGSFHLQTKDSLFVGTS*VLTKRA
Trigger: TGCCCTTTTTGTCAAAACCAAAGAAGTTCCAACAAA...CAAAGAGTCTTTCGTCTGCAGATGAAAAGAACCCTTTAAAAGAGTGCCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp GGACAGAGCATAGCGTTCATCAAAAACAAACAACTTCCCTTTGTAAAAGCCATCAATTTCATCAGCATGTaGTGTTGCCACATGTCTATG +
Preference number: 5 (lower is better)
Translates to: GQSIAFIKNKQLPFVKAINFISM*CCHMSM
Trigger: CATAGACATGTGGCAACACAACATGCTGATGAAATT...GATGGCTTTTACAAAGGGAAGTTGTTTGTTTTTGATGAACGCTATGCTCTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375165.5
ENST00000375172.6
CDS-3UTR CAA 90 bp CTTCTTTATGAAATTCACCTGGGGATAAATGGATTCCAGGCTTCTTGTAGGAGAAATTTCATCAGCATGTaGTGTTGCCACATGTCTATG +
Preference number: 5 (lower is better)
Translates to: LLYEIHLGINGFQASCRRNFISM*CCHMSM
Trigger: CATAGACATGTGGCAACACAACATGCTGATGAAATT...TCTCCTACAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375172.6
CDS-3UTR CAA 90 bp ATATTAAATCTGTTGGTCTATGCATGGCTGCGTATGTGTTTCTTGGAACCTGTGACCCTCCTTGGAATTTaGAAAACCTCGATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: ILNLLVYAWLRMCFLEPVTLLGI*KTSIKV
Trigger: AACTTTAATCGAGGTTTTCAAAATTCCAAGGAGGGT...CACAGGTTCCAAGAAACACATACGCAGCCATGCATAGACCAACAGATTTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS-3UTR CAA 90 bp AAATTCACAGAATCCCTGAAATCTATGTACCAATTCCAGGTTAAGAGCCCTGAATTTGTTGGAACTTCTTaGGTTTTGACAAAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: KFTESLKSMYQFQVKSPEFVGTS*VLTKRA
Trigger: TGCCCTTTTTGTCAAAACCAAAGAAGTTCCAACAAA...TTCAGGGCTCTTAACCTGGAATTGGTACATAGATTTCAGGGATTCTGTGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375165.5
CDS-3UTR CAA 90 bp ACACTGAAATGTAGTATTAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCTTTGTTGGAACTTCTTaGGTTTTGACAAAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: TLKCSISTAARSLFNIMCFVGTS*VLTKRA
Trigger: TGCCCTTTTTGTCAAAACCAAAGAAGTTCCAACAAA...GCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATACTACATTTCAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS GCA 72 bp CTCTTCCCTGCACTGTCTCCGCCTAGCAATTGTCACTaGTCACCGCCCTCGAGCCTATTCCCCCGCCGCGTA +
Preference number: 6 (lower is better)
Translates to: LFPALSPPSNCH*SPPSSLFPRRV
Trigger: TACGCGGCGGGGGAATAGGCTCGAGGGCGGTGAGCAGTGACAATTGCTAGGCGGAGACAGTGCAGGGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS CCA 72 bp AGCTGGCGGCACTGGGGAGTAGAGCAGAGTTTATACTaGTCCCAGCGGGCTCCACAGTATGAACACTCTGGG +
Preference number: 6 (lower is better)
Translates to: SWRHWGVEQSLY*SQRAPQYEHSG
Trigger: CCCAGAGTGTTCATACTGTGGAGCCCGCTGGGACCAGTATAAACTCTGCTCTACTCCCCAGTGCCGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375173.1
CDS CAA 90 bp CCTGCTCCCCTTGTCTTGACATGTGACACAACAGGCTGTGAATCCTaGTCCTTGACAGGCAGGGCAGGTCAAAACGAGCTGGCGGCACTG +
Preference number: 6 (lower is better)
Translates to: PAPLVLTCDTTGCES*SLTGRAGQNELAAL
Trigger: CAGTGCCGCCAGCTCGTTTTGACCTGCCCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACATGTCAAGACAAGGGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS CCA 72 bp AGCTGGCGGCACTGGGGAGTAGAGCAGAGTTTATACTaGTCCCAGCGGGCTCCACAGTATGAACACTCTGAC +
Preference number: 6 (lower is better)
Translates to: SWRHWGVEQSLY*SQRAPQYEHSD
Trigger: GTCAGAGTGTTCATACTGTGGAGCCCGCTGGGACCAGTATAAACTCTGCTCTACTCCCCAGTGCCGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341170.5
CDS CCA 72 bp CTGTCGCACATGCTGCAAGAGTTCCCTAGGTATGCGTaGCCGTCGGGCTGTGCACTCGCATTCCTCTTTAAA +
Preference number: 6 (lower is better)
Translates to: LSHMLQEFPRYA*PSGCALAFLFK
Trigger: TTTAAAGAGGAATGCGAGTGCACAGCCCGACGGCCACGCATACCTAGGGAACTCTTGCAGCATGTGCGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS GCA 72 bp CCTACTTTTACCGAGGGCCTGGGAAAATGCCAAAGGTaGTGCTCACATAAGCACTGGCCCATCCTCATCAGC +
Preference number: 6 (lower is better)
Translates to: PTFTEGLGKCQR*CSHKHWPILIS
Trigger: GCTGATGAGGATGGGCCAGTGCTTATGTGAGCAGCACCTTTGGCATTTTCCCAGGCCCTCGGTAAAAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS CAA 72 bp TTGACATGTGACACAACAGGCTGTGAATCCTTGTCCTaGACAGGCAGGGCAGGTCAAAACGAGCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: LTCDTTGCESLS*TGRAGQNELAA
Trigger: TGCCGCCAGCTCGTTTTGACCTGCCCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACATGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS TCA 72 bp ATTCACACACACGTGGACAGGCATTGCTCCCTTTGCTaGCTAGAATCTCGTAGATCCTGTGGAACCCGGGGA +
Preference number: 6 (lower is better)
Translates to: IHTHVDRHCSLC*LESRRSCGTRG
Trigger: TCCCCGGGTTCCACAGGATCTACGAGATTCTAGTCAGCAAAGGGAGCAATGCCTGTCCACGTGTGTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375173.1
CDS GCA 72 bp ACTTTTACCGAGGGCCTGGGAAAATGCCAAAGGTGCTaGTCACATAAGCACTGGCCCATCCTCATCAGCATC +
Preference number: 6 (lower is better)
Translates to: TFTEGLGKCQRC*SHKHWPILISI
Trigger: GATGCTGATGAGGATGGGCCAGTGCTTATGTGAGCAGCACCTTTGGCATTTTCCCAGGCCCTCGGTAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS CAA 72 bp CTTGTCTTGACATGTGACACAACAGGCTGTGAATCCTaGTCCTTGACAGGCAGGGCAGGTCAAAACGAGCTG +
Preference number: 6 (lower is better)
Translates to: LVLTCDTTGCES*SLTGRAGQNEL
Trigger: CAGCTCGTTTTGACCTGCCCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACATGTCAAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS TCA 72 bp TGCATAGGGCCTGAAACTTTCCTGCTCCCCTTGTCTTaGCATGTGACACAACAGGCTGTGAATCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: CIGPETFLLPLS*HVTQQAVNPCP
Trigger: AGGACAAGGATTCACAGCCTGTTGTGTCACATGTCAAGACAAGGGGAGCAGGAAAGTTTCAGGCCCTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS TCA 72 bp CTCGCATTCCTCTTTAAAGCTGTCTTGCATAGGGCCTaGAACTTTCCTGCTCCCCTTGTCTTGACATGTGAC +
Preference number: 6 (lower is better)
Translates to: LAFLFKAVLHRA*NFPAPLVLTCD
Trigger: GTCACATGTCAAGACAAGGGGAGCAGGAAAGTTTCAGGCCCTATGCAAGACAGCTTTAAAGAGGAATGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375173.1
CDS CAA 90 bp CCAGGTCATCTCCTTGGTCTGGTGAAGTGGAAGAAGGCATCTGGTTaGGTTGCAACAGTGAAGCAGATATTCCTTTCAGTTAAATACCTC +
Preference number: 6 (lower is better)
Translates to: PGHLLGLVKWKKASG*VATVKQIFLSVKYL
Trigger: GAGGTATTTAACTGAAAGGAATATCTGCTTCACTGTTGCAACCAAACCAGATGCCTTCTTCCACTTCACCAGACCAAGGAGATGACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375172.6
CDS CCA 72 bp GCTGGTCCAAAATCATATGGTGACTCAGTGAAAGAATaGGGACGAGCATACTCCTTCTATTGTACTGTCTCG +
Preference number: 6 (lower is better)
Translates to: AGPKSYGDSVKE*GRAYSFYCTVS
Trigger: CGAGACAGTACAATAGAAGGAGTATGCTCGTCCCCATTCTTTCACTGAGTCACCATATGATTTTGGACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484708.1
CDS CAA 72 bp CTCCTTGGTCTGGTGAAGTGGAAGAAGGCATCTGGTTaGGTTGCAACAGTGAAGCAGATATTCCTTTCAGTT +
Preference number: 6 (lower is better)
Translates to: LLGLVKWKKASG*VATVKQIFLSV
Trigger: AACTGAAAGGAATATCTGCTTCACTGTTGCAACCAAACCAGATGCCTTCTTCCACTTCACCAGACCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341170.5
ENST00000375172.6
CDS CAA 72 bp CTCAGTGAAAGAATGGGGACGAGCATACTCCTTCTATaGTACTGTCTCGTAACCTTAAAATCATCTTTACAC +
Preference number: 6 (lower is better)
Translates to: LSERMGTSILLL*YCLVTLKSSLH
Trigger: GTGTAAAGATGATTTTAAGGTTACGAGACAGTACAATAGAAGGAGTATGCTCGTCCCCATTCTTTCACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484708.1