Pregenerated sensors for TSTD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000215845Ensembl transcript IDs: ENST00000318289.14, ENST00000368023.7, ENST00000368024.5, ENST00000423014.3, ENST00000462952.1, ENST00000466967.1, ENST00000486084.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGRESPE*GPGPPS Trigger: AGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCG...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCGCCAGCTGCGTGGCCTaGAGGCCCCGCTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGASCVA*RPRLPI Trigger: GATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR TCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGCGAGACCGTGGGCGCTaGGGAAGGGGCGCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQRDRGR*GRGATA Trigger: GGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCG...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000368023.7 ENST00000466967.1 |
||
| CDS-3UTR TCA 90 bp | CACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGCGAGACCGTGGGCGCTaGGGAAGGGGCGCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQVSPFTPLVKVAIKGPGRDRGR*GRGATA Trigger: GGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCG...CCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368023.7 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCTGGGATGGTCCCAGCTaGCGCCTCCTCGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGWDGPS*RLLARA Trigger: CGCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCA...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATAGACTCCGGGCCAGCTaGGTGGCCTGGAGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNRLRAS*VAWRPR Trigger: GCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTCT...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTAGACTCCGGGCCAGCTaGGTGGCCTGGAGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFTPLVKVAIKGPGGRLRAS*VAWRPR Trigger: GCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTCT...ACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNRESPE*GPGPPS Trigger: AGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCG...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGTCCGGGCCAGCTGCGTaGCCTGGAGGCCCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQSGPAA*PGGPAC Trigger: GCAAGCGGGGCCTCCAGGCCACGCAGCTGGCCCGGA...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATGCCAGCTGCGTGGCCTaGAGGCCCCGCTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNASCVA*RPRLPI Trigger: GATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR TCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCGGACACCGGGATGTTaGGCGCCCCTGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNRTPGC*APLGWS Trigger: GGACCATCCCAGGGGCGCTCAACATCCCGGTGTCCG...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGTGGGATGGTCCCAGCTaGCGCCTCCTCGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQWDGPS*RLLARA Trigger: CGCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCA...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTTGGGATGGTCCCAGCTaGCGCCTCCTCGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFTPLVKVAIKGPGGWDGPS*RLLARA Trigger: CGCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCA...ACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | CACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HQVSPFTPLVKVAIKGPGQEARP*ALRKGR Trigger: GCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTG...CCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368023.7 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTCGCCCTCTCGGCGCCTaGAACATCTCCCGTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFTPLVKVAIKGPGGRPLGA*NISRSL Trigger: GAGGGAACGGGAGATGTTGCAGGCGCCGAGAGGGCG...ACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368024.5 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAGACTCCGGGCCAGCTaGGTGGCCTGGAGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPIHQVSPFTPLVKVAIRLRAS*VAWRPR Trigger: GCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTCT...AATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAQHYKELPNSPSQPVHTRESPE*GPGPPS Trigger: AGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCG...GGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAGGCTCCAGCGTAGTTaGGAGCCCTGTGGAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGRLQRS*EPCGDK Trigger: TTTGTCTCCACAGGGCTCGCAACTACGCTGGAGCCT...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318289.14 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAGGCTCCAGCGTAGTTaGGAGCCCCAGTGTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGRLQRS*EPQCIQ Trigger: TTGGATACACTGGGGCTCGCAACTACGCTGGAGCCT...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | TGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGCCAGCTGCGTGGCCTaGAGGCCCCGCTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPIHQVSPFTPLVKVAIKASCVA*RPRLPI Trigger: GATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC...CTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTATCCGGGCCAGCTGCGTaGCCTGGAGGCCCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HNTIRSCPIHQVSPFTPLSGPAA*PGGPAC Trigger: GCAAGCGGGGCCTCCAGGCCACGCAGCTGGCCCGGA...TAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTAGACTCCGGGCCAGCTaGGTGGCCTGGAGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCAQHYKELPNSPSQPVRLRAS*VAWRPR Trigger: GCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTCT...AACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | ATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCACAGGAAGCGAGACCGTaGGCGCTCCAGCCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHQVSPFTPLVKVAIKGPQEARP*ALQPWC Trigger: GCACCATGGCTGGAGCGCCCACGGTCTCGCTTCCTG...TGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318289.14 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | ATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGATGTTGAGCGCCCCTaGGATGGTCCCAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IHQVSPFTPLVKVAIKGPDVERP*DGPSCR Trigger: GCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATC...TGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTGCCAGCTGCGTGGCCTaGAGGCCCCGCTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QHYKELPNSPSQPVHTLSASCVA*RPRLPI Trigger: GATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC...ACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACGCCAGCTGCGTGGCCTaGAGGCCCCGCTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LCAQHYKELPNSPSQPVHASCVA*RPRLPI Trigger: GATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC...GTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTTCCGGGCCAGCTGCGTaGCCTGGAGGCCCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCAQHYKELPNSPSQPVSGPAA*PGGPAC Trigger: GCAAGCGGGGCCTCCAGGCCACGCAGCTGGCCCGGA...AACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | TTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACTGGGATGGTCCCAGCTaGCGCCTCCTCGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LCAQHYKELPNSPSQPVHWDGPS*RLLARA Trigger: CGCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCA...GTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNPGGPA*PSDRRK Trigger: TTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGG...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGAGGCTCCAGCGTAGTTaGGAGCCCCAGTGTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQRLQRS*EPQCIQ Trigger: TTGGATACACTGGGGCTCGCAACTACGCTGGAGCCT...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR TCA 90 bp | TTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCCGGACACCGGGATGTTaGGCGCCCCTGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCVHNTIRSCPIHQVSPFRTPGC*APLGWS Trigger: GGACCATCCCAGGGGCGCTCAACATCCCGGTGTCCG...GAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCGGACACCGGGATGTTaGGCGCCCCTGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCAQHYKELPNSPSQPVRTPGC*APLGWS Trigger: GGACCATCCCAGGGGCGCTCAACATCCCGGTGTCCG...AACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | ATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGATGTTGAGCGCCCCTaGGATGGTCCCAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSCPIHQVSPFTPLVKVDVERP*DGPSCR Trigger: GCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATC...CACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACGATGTTGAGCGCCCCTaGGATGGTCCCAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCAQHYKELPNSPSQPVHDVERP*DGPSCR Trigger: GCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATC...GTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | ACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TIRSCPIHQVSPFTPLVKQEARP*ALRKGR Trigger: GCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTG...CTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368023.7 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCCAGAAGAAAACGAGATaGTCATCTTCCAGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSPFTPLVKVAIKGPGGGQKKTR*SSSSFG Trigger: GCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTG...GCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCAGGAAGCGAGACCGTaGGCGCTCCAGCCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCAQHYKELPNSPSQPVQEARP*ALQPWC Trigger: GCACCATGGCTGGAGCGCCCACGGTCTCGCTTCCTG...AACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318289.14 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGGCAGAATATAAAGCCTaGAAGGCAGCTGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQAEYKA*KAAGSI Trigger: GATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATGCAGAATATAAAGCCTaGAAGGCAGCTGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNAEYKA*KAAGSI Trigger: GATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CCA 90 bp | CAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGCAGAATATAAAGCCTaGAAGGCAGCTGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFTPLVKVAIKGPGGAEYKA*KAAGSI Trigger: GATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC...ACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCGGACACCGGGATGTTaGGCGCCCCTGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLLCAQHYKELPNSPSQRTPGC*APLGWS Trigger: GGACCATCCCAGGGGCGCTCAACATCCCGGTGTCCG...CTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | CCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATCAGTGGCAATCAGTAAGCTaGCTCCTGCCTAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFTPLVKVAIKGPGGGNQWQSVS*LLPNSL Trigger: AAGAGAGTTAGGCAGGAGGCAGCTTACTGATTGCCA...CTGATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | CACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGCAGAAGAAAACGAGATaGTCATCTTCCAGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQVSPFTPLVKVAIKGPGQKKTR*SSSSFG Trigger: GCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTG...CCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR GCA 90 bp | TGCCTAACTCTCTTTCTCCAACCATTCTCTATAGGCTCCAGCGTAGTTGCGAGCCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLTLFLQPFSIGSSVVASPGGPA*PSDRRK Trigger: TTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGG...GCTCGCAACTACGCTGGAGCCTATAGAGAATGGTTGGAGAAAGAGAGTTAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318289.14 |
||
| CDS-3UTR TCA 90 bp | TTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACCCCCGCTTGCCCATCTaGCAGAAGAAAACGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCAQHYKELPNSPSQPVHPRLPI*QKKTRC Trigger: GCATCTCGTTTTCTTCTGTCAGATGGGCAAGCGGGG...GTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | CAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHYKELPNSPSQPVHTLSPGGPA*PSDRRK Trigger: TTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGG...ACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | ATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRSCPIHQVSPFTPLVKVPGGPA*PSDRRK Trigger: TTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGG...CACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCAGGCTCCAGCGTAGTTaGGAGCCCCAGTGTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLLCAQHYKELPNSPSQPRLQRS*EPQCIQ Trigger: TTGGATACACTGGGGCTCGCAACTACGCTGGAGCCT...GGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LMLLCAQHYKELPNSPSQAAGSI*RALSNS Trigger: CGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGC...CTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCCTAACTCTCTTTCTCCAACCATTCTCTATAGGCTCCAGCGTAGTTGCTGGCAATCAGTAAGCTaGCTCCTGCCTAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPNSLSPTILYRLQRSCWQSVS*LLPNSL Trigger: AAGAGAGTTAGGCAGGAGGCAGCTTACTGATTGCCA...GCAACTACGCTGGAGCCTATAGAGAATGGTTGGAGAAAGAGAGTTAGGCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318289.14 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTTGGCAATCAGTAAGCTaGCTCCTGCCTAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCPIHQVSPFTPLVKVAIWQSVS*LLPNSL Trigger: AAGAGAGTTAGGCAGGAGGCAGCTTACTGATTGCCA...AATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | CAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTGCAGAATATAAAGCCTaGAAGGCAGCTGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QHYKELPNSPSQPVHTLSAEYKA*KAAGSI Trigger: GATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC...ACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCAATTCACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGCAGAAGAAAACGAGATaGTCATCTTCCAGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPIHQVSPFTPLVKVAIKQKKTR*SSSSFG Trigger: GCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTG...CTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTCGCAGAATATAAAGCCTaGAAGGCAGCTGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FCVHNTIRSCPIHQVSPFAEYKA*KAAGSI Trigger: GATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC...GAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCCAGAAGAAAACGAGATaGTCATCTTCCAGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLCAQHYKELPNSPSQPQKKTR*SSSSFG Trigger: GCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTG...GGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGTGGCAATCAGTAAGCTaGCTCCTGCCTAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMLLCAQHYKELPNSPSQWQSVS*LLPNSL Trigger: AAGAGAGTTAGGCAGGAGGCAGCTTACTGATTGCCA...CTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| 3UTR CAA 72 bp | TATTTGATGCTTTTGTGTGCACAACACTATAAGGAGTaGCCCAATTCACCAAGTCAGCCCGTTCACACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLCAQHYKE*PNSPSQPVHTL Trigger: AAGGGTGTGAACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCATCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 |
||
| CDS GCA 90 bp | GGGCGCTCCAGCCATGGTGCGCGTAGCAACCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCTCGGCGCCTGCAACATCTCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSSHGARSNRESPE*GPGPPSRRLQHLPF Trigger: GAACGGGAGATGTTGCAGGCGCCGAGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCGGTTGCTACGCGCACCATGGCTGGAGCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423014.3 |
||
| CDS GCA 90 bp | GGACACTCCAGCCATGGTGCGCGTAGCAACCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCTCGGCGCCTGCAACATCTCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GHSSHGARSNRESPE*GPGPPSRRLQHLPF Trigger: GAACGGGAGATGTTGCAGGCGCCGAGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCGGTTGCTACGCGCACCATGGCTGGAGTGTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368024.5 |
||
| CDS CCA 90 bp | CCCGTCCGGAGGCTAGGAGTGAACGGAGTTCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGCGACAGCCTCCAGCCATGGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PVRRLGVNGVQEARP*ALRKGRDSLQPWCA Trigger: CGCGCACCATGGCTGGAGGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTGAACTCCGTTCACTCCTAGCCTCCGGACGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368023.7 |
||
| CDS CCA 90 bp | CTGGGCGTCCCCTCTCCACCCTATACCCGGGATGTTGAGCGCCCCTaGGATGGTCCCAGCTGCCGCCTCCTCGCGAGAGCGCACGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGVPSPPYTRDVERP*DGPSCRLLARAHVE Trigger: TTCGACGTGCGCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS TCA 90 bp | ATTCCACCACCTGGGCGTCCCCTCTCCACCCTATACCCGGGATGTTaGGCGCCCCTGGGATGGTCCCAGCTGCCGCCTCCTCGCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPPPGRPLSTLYPGC*APLGWSQLPPPRES Trigger: GCTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAGGTGGTGGAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CCA 90 bp | CCCGTCCGGAGGCTAGGAGTGAACGGAGTTCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGCGACAGCCTTCAGGAAGAGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVRRLGVNGVQEARP*ALRKGRDSLQEEGA Trigger: GGCCCCCTCTTCCTGAAGGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTGAACTCCGTTCACTCCTAGCCTCCGGACGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466967.1 |
||
| CDS-3UTR CAA 90 bp | AGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGGGTGGCAATTCGGACACCGGGATGTaGAGCGCCCCTGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPFTPLVKVAIKGPGGGNSDTGM*SAPGMV Trigger: GACCATCCCAGGGGCGCTCAACATCCCGGTGTCCGA...ATTGCCACCCCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS-3UTR CAA 90 bp | CACCAAGTCAGCCCGTTCACACCCTTAGTTAAGGTGGCCATTAAGGGGCCAGGGTCGGACACCGGGATGTaGAGCGCCCCTGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQVSPFTPLVKVAIKGPGSDTGM*SAPGMV Trigger: GACCATCCCAGGGGCGCTCAACATCCCGGTGTCCGA...CCCTGGCCCCTTAATGGCCACCTTAACTAAGGGTGTGAACGGGCTGACTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS CCA 90 bp | GTCCCATTGGCAAAGAACCTCCTGAACGGTCTCTATTCCACCACCTaGGCGTCCCCTCTCCACCCTATACCCGGGATGTTGAGCGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLAKNLLNGLYSTT*ASPLHPIPGMLSAP Trigger: AGGGGCGCTCAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAGGTGGTGGAATAGAGACCGTTCAGGAGGTTCTTTGCCAATGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS GCA 90 bp | GGCTTCTCAGCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACCGGGATGTTGAGCGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GFSAEYKAWKAAGSI*RALSNSDTGMLSAP Trigger: AGGGGCGCTCAACATCCCGGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGCTGAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS GCA 90 bp | TGTATCCAAGACTCCGGGCCAGCTGCGTGGCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAACGAGATGCTCATCTTCCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CIQDSGPAAWPGGPA*PSDRRKRDAHLPAL Trigger: CAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTCTTGGATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000462952.1 ENST00000466967.1 ENST00000486084.1 |
||
| CDS CCA 90 bp | GAAGGGAAAGCCAGCAATTTGGCACTCAGGTTCGGAAGCTGGGCCTaGAAGGGCTGGGTCCTGGGGGCCCCCAAACAACATATGATAACC | + |
|
Preference number: 5 (lower is better) Translates to: EGKASNLALRFGSWA*KGWVLGAPKQHMIT Trigger: GGTTATCATATGTTGTTTGGGGGCCCCCAGGACCCAGCCCTTCCAGGCCCAGCTTCCGAACCTGAGTGCCAAATTGCTGGCTTTCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS TCA 90 bp | TATAGGCTCCAGCGTAGTTGCGAGCCCTGTGGAGACAAAGAAGCGTaGGAGACTGACAGGAATGACAGGCAGTCCCCATCACCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YRLQRSCEPCGDKEA*ETDRNDRQSPSPPS Trigger: GCTGGGAGGTGATGGGGACTGCCTGTCATTCCTGTCAGTCTCTCACGCTTCTTTGTCTCCACAGGGCTCGCAACTACGCTGGAGCCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318289.14 |
||
| CDS GCA 90 bp | GGCTTCTCAGCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACTCCAGCCATGGTGCGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: GFSAEYKAWKAAGSI*RALSNSDTPAMVRV Trigger: TACGCGCACCATGGCTGGAGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGCTGAGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368024.5 |
||
| CDS CCA 90 bp | GAAGGCAGCTGGCTCCATCTGCAGAGCACTCTCCAACTCGGACACTaGAGGAGTGGAGAGGGTAGAAGGGAAAGCCAGCAATTTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: EGSWLHLQSTLQLGH*RSGEGRRESQQFGT Trigger: AGTGCCAAATTGCTGGCTTTCCCTTCTACCCTCTCCACTCCTCCAGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS GCA 90 bp | GGCTTCTCAGCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACTGGAGGAGTGGAGAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GFSAEYKAWKAAGSI*RALSNSDTGGVERV Trigger: TACCCTCTCCACTCCTCCAGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGCTGAGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS GCA 90 bp | GAAGCTGAGGGCTGGCTCCCGGGAATGCAGGACCCCCATAATCAGTaGCTTCCCCATTCCATCCTAAATGAGGTCCCATTGGCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EAEGWLPGMQDPHNQ*LPHSILNEVPLAKN Trigger: GTTCTTTGCCAATGGGACCTCATTTAGGATGGAATGGGGAAGGCACTGATTATGGGGGTCCTGCATTCCCGGGAGCCAGCCCTCAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGCCCGTTTCGGACACCGGGATGTaGAGCGCCCCTGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCAQHYKELPNSPSQPVSDTGM*SAPGMV Trigger: GACCATCCCAGGGGCGCTCAACATCCCGGTGTCCGA...AACGGGCTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTTTTGTGTGCACAACACTATAAGGAGTTGCCCAATTCACCAAGTCAGTCGGACACCGGGATGTaGAGCGCCCCTGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMLLCAQHYKELPNSPSQSDTGM*SAPGMV Trigger: GACCATCCCAGGGGCGCTCAACATCCCGGTGTCCGA...CTGACTTGGTGAATTGGGCAACTCCTTATAGTGTTGTGCACACAAAAGCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 |
||
| CDS GCA 72 bp | AGCCATGGTGCGCGTAGCAACCGCGAGTCTCCGGAGTaGGGCCCTGGCCCGCCCTCTCGGCGCCTGCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SHGARSNRESPE*GPGPPSRRLQH Trigger: ATGTTGCAGGCGCCGAGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGCGGTTGCTACGCGCACCATGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368024.5 ENST00000423014.3 |
||
| CDS TCA 72 bp | CCTGGGCGTCCCCTCTCCACCCTATACCCGGGATGTTaGGCGCCCCTGGGATGGTCCCAGCTGCCGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGRPLSTLYPGC*APLGWSQLPPP Trigger: AGGAGGCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CAA 90 bp | TATTCCACCACCTGGGCGTCCCCTCTCCACCCTATACCCGGGATGTaGAGCGCCCCTGGGATGGTCCCAGCTGCCGCCTCCTCGCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YSTTWASPLHPIPGM*SAPGMVPAAASSRE Trigger: CTCTCGCGAGGAGGCGGCAGCTGGGACCATCCCAGGGGCGCTCAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAGGTGGTGGAATA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CCA 72 bp | AGGCTAGGAGTGAACGGAGTTCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGCGACAGCCTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLGVNGVQEARP*ALRKGRDSLQP Trigger: TGGCTGGAGGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTGAACTCCGTTCACTCCTAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368023.7 |
||
| CDS CCA 72 bp | AGGCTAGGAGTGAACGGAGTTCAGGAAGCGAGACCGTaGGCGCTGAGGAAGGGGCGCGACAGCCTTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLGVNGVQEARP*ALRKGRDSLQE Trigger: TTCCTGAAGGCTGTCGCGCCCCTTCCTCAGCGCCCACGGTCTCGCTTCCTGAACTCCGTTCACTCCTAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466967.1 |
||
| CDS CCA 72 bp | GCCAGCAATTTGGCACTCAGGTTCGGAAGCTGGGCCTaGAAGGGCTGGGTCCTGGGGGCCCCCAAACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ASNLALRFGSWA*KGWVLGAPKQH Trigger: ATGTTGTTTGGGGGCCCCCAGGACCCAGCCCTTCCAGGCCCAGCTTCCGAACCTGAGTGCCAAATTGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS GCA 72 bp | GACTCCGGGCCAGCTGCGTGGCCTGGAGGCCCCGCTTaGCCATCTGACAGAAGAAAACGAGATGCTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: DSGPAAWPGGPA*PSDRRKRDAHL Trigger: AAGATGAGCATCTCGTTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGCCCGGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000462952.1 ENST00000466967.1 ENST00000486084.1 |
||
| CDS CAA 90 bp | TCGGACACTGGAGGAGTGGAGAGGGTAGAAGGGAAAGCCAGCAATTaGGCACTCAGGTTCGGAAGCTGGGCCTGGAAGGGCTGGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SDTGGVERVEGKASN*ALRFGSWAWKGWVL Trigger: CAGGACCCAGCCCTTCCAGGCCCAGCTTCCGAACCTGAGTGCCAAATTGCTGGCTTTCCCTTCTACCCTCTCCACTCCTCCAGTGTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS GCA 72 bp | TCCTTCCTACGGAAGCTGAGGGCTGGCTCCCGGGAATaGAGGACCCCCATAATCAGTGCCTTCCCCATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFLRKLRAGSRE*RTPIISAFPIP Trigger: TGGAATGGGGAAGGCACTGATTATGGGGGTCCTGCATTCCCGGGAGCCAGCCCTCAGCTTCCGTAGGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS TCA 72 bp | GCCAGCTGCGTGGCCTGGAGGCCCCGCTTGCCCATCTaGCAGAAGAAAACGAGATGCTCATCTTCCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASCVAWRPRLPI*QKKTRCSSSSF Trigger: AAAGCTGGAAGATGAGCATCTCGTTTTCTTCTGTCAGATGGGCAAGCGGGGCCTCCAGGCCACGCAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000462952.1 ENST00000466967.1 ENST00000486084.1 |
||
| CDS GCA 72 bp | GGCGTCCAGATTTGGGGAGGTCAAGAGAAGCTGGTCTaGCCCTCTCCTCTCCGCCTGCTGTCTTCTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GVQIWGGQEKLV*PSPLRLLSSQT Trigger: AGTTTGAGAAGACAGCAGGCGGAGAGGAGAGGGGCAGACCAGCTTCTCTTGACCTCCCCAAATCTGGACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CCA 72 bp | GCAAAGAACCTCCTGAACGGTCTCTATTCCACCACCTaGGCGTCCCCTCTCCACCCTATACCCGGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AKNLLNGLYSTT*ASPLHPIPGML Trigger: CAACATCCCGGGTATAGGGTGGAGAGGGGACGCCCAGGTGGTGGAATAGAGACCGTTCAGGAGGTTCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS GCA 72 bp | GCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACCGGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AEYKAWKAAGSI*RALSNSDTGML Trigger: CAACATCCCGGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000423014.3 ENST00000466967.1 |
||
| CDS GCA 72 bp | GCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACTCCAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: AEYKAWKAAGSI*RALSNSDTPAM Trigger: CATGGCTGGAGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368024.5 |
||
| CDS GCA 72 bp | GCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCATCTaGAGAGCACTCTCCAACTCGGACACTGGAGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AEYKAWKAAGSI*RALSNSDTGGV Trigger: CACTCCTCCAGTGTCCGAGTTGGAGAGTGCTCTGCAGATGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS CAA 90 bp | CCCCATAATCAGTGCCTTCCCCATTCCATCCTAAATGAGGTCCCATaGGCAAAGAACCTCCTGAACGGTCTCTATTCCACCACCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PHNQCLPHSILNEVP*AKNLLNGLYSTTWA Trigger: CGCCCAGGTGGTGGAATAGAGACCGTTCAGGAGGTTCTTTGCCAATGGGACCTCATTTAGGATGGAATGGGGAAGGCACTGATTATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CAA 72 bp | CCCACCCCAATTTCAAGGAACAGAAACCGACAACTTTaGAATGCAAGCCACTCCCTAAGCTGTGAGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PTPISRNRNRQL*NASHSLSCEEA Trigger: CGCCTCCTCACAGCTTAGGGAGTGGCTTGCATTCAAAAGTTGTCGGTTTCTGTTCCTTGAAATTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462952.1 ENST00000486084.1 |
||
| CDS CAA 72 bp | CAGTGCCTTCCCCATTCCATCCTAAATGAGGTCCCATaGGCAAAGAACCTCCTGAACGGTCTCTATTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: QCLPHSILNEVP*AKNLLNGLYST Trigger: GGTGGAATAGAGACCGTTCAGGAGGTTCTTTGCCAATGGGACCTCATTTAGGATGGAATGGGGAAGGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486084.1 |
||
| CDS CAA 90 bp | GCTTGCCCATCTGACAGAAGAAAACGAGATGCTCATCTTCCAGCTTaGGCTTCTCAGCAGAATATAAAGCCTGGAAGGCAGCTGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ACPSDRRKRDAHLPA*ASQQNIKPGRQLAP Trigger: TGGAGCCAGCTGCCTTCCAGGCTTTATATTCTGCTGAGAAGCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTGTCAGATGGGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000462952.1 ENST00000466967.1 ENST00000486084.1 |
||
| CDS CAA 72 bp | TCTGACAGAAGAAAACGAGATGCTCATCTTCCAGCTTaGGCTTCTCAGCAGAATATAAAGCCTGGAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDRRKRDAHLPA*ASQQNIKPGRQ Trigger: CTGCCTTCCAGGCTTTATATTCTGCTGAGAAGCCAAAGCTGGAAGATGAGCATCTCGTTTTCTTCTGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000318289.14 ENST00000368023.7 ENST00000368024.5 ENST00000423014.3 ENST00000462952.1 ENST00000466967.1 ENST00000486084.1 |
||