Pregenerated sensors for TSSK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000206203Ensembl transcript IDs: ENST00000399635.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AATAGTGGTTTAATTGACGAATTTTACTTGCACCTGTaGCTTCTTCAGATCCTACCTGCCTACTTAGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: NSGLIDEFYLHL*LLQILPAYLVY Trigger: GTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAAAATTCGTCAATTAAACCACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | TGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCTTGTGGTCGGGCCGGTaGTCGGGCCTCAAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CLLQILPAYLVYVKADCTLWSGR*SGLKPV Trigger: GACAGGCTTGAGGCCCGACCACCGGCCCGACCACAA...GGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGTTGGCTCCAAGCTTGTaGTCGGGCCGGTGGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PVPSSDPTCLLSLREGRLLAPSL*SGRWSG Trigger: GCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAA...CAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | TCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCCTGTGGCATCGTCCATaGTGCCAGGAGCGACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSDPTCLLSLREGRLHHALWHRP*CQERLA Trigger: CGCCAGTCGCTCCTGGCACCATGGACGATGCCACAG...GGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCCACCAGCAGCCGGTGCTaGGTTTTGGCTCCAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LQILPAYLVYVKADCTMPTSSRC*VLAPSL Trigger: CAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGT...GGGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGTGGCATCGTCCATGGTaGCAGGAGCGACTGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YLHLCLLQILPAYLVYVKWHRPW*QERLAP Trigger: CGGCGCCAGTCGCTCCTGGCACCATGGACGATGCCA...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | TTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGCCGGTGCTGGGTTTTaGCTCCAAGCTTGTGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LHLCLLQILPAYLVYVKAAGAGF*LQACGR Trigger: CCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGC...GGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCGATGGTCTTTGGCCCTaGAGGTCTCGGCCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAPVPSSDPTCLLSLREGDGLWP*RSRPAC Trigger: ACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATC...GCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCCAGATGTGATGGTCTTTaGCCCTGGAGGTCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQILPAYLVYVKADCTMPRCDGL*PWRSRP Trigger: TGGCCGAGACCTCCAGGGCCAAAGACCATCACATCT...GGGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGCCGTGGTTGACAGTTaGCAGGATGTCCATCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LHLCLLQILPAYLVYVKAAVVDS*QDVHLP Trigger: CGGGAGATGGACATCCTGGCAACTGTCAACCACGGC...GGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | CTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCGCTGTCGGAACATCTTaGGTGCCACGTCCTCATGCA | + |
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Preference number: 4 (lower is better) Translates to: LCLLQILPAYLVYVKADCAVGTS*VPRPHA Trigger: TGCATGAGGACGTGGCACGCAAGATGTTCCGACAGC...GCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TTACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAACAGCACCTCGGGGGCTaGATATGCTGCCGACCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LLAPVPSSDPTCLLSLREQHLGG*ICCRPA Trigger: TGCGGGTCGGCAGCATATGCAGCCCCCGAGGTGCTG...TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCGTCATGCTAGGTGCTTaGTTTCCCCACCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDPTCLLSLREGRLHHAVMLGA*FPHLSS Trigger: GGAGCTGAGGTGGGGAAAGCAAGCACCTAGCATGAC...GGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCTCTTGGTGTCCAGTTTaGACTCAGCGCGGTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: SSDPTCLLSLREGRLHHASWCPV*TQRGTC Trigger: GCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGA...GGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | TGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCTCTTCCTTAGGACTGTaGCATCGTCCATGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLQILPAYLVYVKADCTSSLGL*HRPWCQ Trigger: CTGGCACCATGGACGATGCCACAGTCCTAAGGAAGA...GGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR TCA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCAGCCACGAGTGGCTaGGGATCTCATCGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: YLHLCLLQILPAYLVYVKAATSG*GSHRCG Trigger: TCCACATCGATGAGATCCTCAGCCACTCGTGGCTGC...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCTCAAGCCTGTCTTaGTGTCCAGTTTGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSDPTCLLSLREGRLHHASSLS*CPVCTQ Trigger: CTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGC...ATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR TCA 90 bp | TTACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAATCAGCTCCGGAGATGTaGTGGTCTTTGGCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAPVPSSDPTCLLSLRESAPEM*WSLALE Trigger: CTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGA...TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | GTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACGGCAGATTTGACTTTTaGGTAGGAACCCTTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VPSSDPTCLLSLREGRLHGRFDF*VGTLAK Trigger: CTTGGCAAGGGTTCCTACGCAAAAGTCAAATCTGCC...GTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | CTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCTTGATGATGGAGCCGTaGTTGACAGTTGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LAPVPSSDPTCLLSLREGLMMEP*LTVARM Trigger: CATCCTGGCAACTGTCAACCACGGCTCCATCATCAA...GCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR TCA 90 bp | TTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCCAGAGTAGGCAGATTTaGCTTTTGCGTAGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: LHLCLLQILPAYLVYVKAQSRQI*LLRRNP Trigger: AGGGTTCCTACGCAAAAGTCAAATCTGCCTACTCTG...GGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGCATTGTCATGCTAGGTaGTTGCTTTCCCCACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YLHLCLLQILPAYLVYVKHCHAR*LLSPPQ Trigger: CTGAGGTGGGGAAAGCAAGCACCTAGCATGACAATG...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | CTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCCTTGACGAATTTTACTTaGACCTGTGCCTTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LQILPAYLVYVKADCTMPLTNFT*TCAFFR Trigger: TCTGAAGAAGGCACAGGTGCAAGTAAAATTCGTCAA...GGGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | CTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCTTTTACTTGCACCTGTaGCTTCTTCAGATCCTACCT | + |
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Preference number: 4 (lower is better) Translates to: LAPVPSSDPTCLLSLREGFYLHL*LLQILP Trigger: AGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAAAA...GCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CCA 90 bp | AATCAAAATAGTGGTTTAATTGACGAATTTTACTTGCACCTGTGCCTTCTTCAGACGTGGCTTTGGGCTTaGGGGGCTGCAGCCACGAGT | + |
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Preference number: 4 (lower is better) Translates to: NQNSGLIDEFYLHLCLLQTWLWA*GAAATS Trigger: ACTCGTGGCTGCAGCCCCCCAAGCCCAAAGCCACGT...CTGAAGAAGGCACAGGTGCAAGTAAAATTCGTCAATTAAACCACTATTTTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR TCA 90 bp | TTACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAAACCCTTGCCAAGATTaGTGCCTACGATGTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: LLAPVPSSDPTCLLSLRENPCQD*CLRCNP Trigger: AGGGTTACATCGTAGGCATCAATCTTGGCAAGGGTT...TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR GCA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGTCTTCAGATCCTACCTaGCTACTTAGTTTACGTGAA | + |
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Preference number: 4 (lower is better) Translates to: YLHLCLLQILPAYLVYVKSSDPT*LLSLRE Trigger: TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | CTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTaGTGTCCAGTTTGCACTCAGCGCGGTACTTGCCCTCCCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LQACGRAGGRASSLS*CPVCTQRGTCPPPP Trigger: GGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | TCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTaGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SGTTSSRCWVLAPSL*SGRWSGLKPVLVSS Trigger: ACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | TCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTaGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SCSRSRAPPAAGAGF*LQACGRAGGRASSL Trigger: CAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | TCCTCCATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTaGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSILFSFSGTTSSRC*VLAPSLWSGRWSGL Trigger: GAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAGGATGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | AGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTaGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTGCACTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SSRCWVLAPSLWSGR*SGLKPVLVSSLHSA Trigger: CGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | TTGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTGGCCCTaGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGTTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: LLSPPQLRRCDGLWP*RSRPACPPSCSRSR Trigger: CCGAGAACGAGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGGGGAAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 90 bp | AGGTGCTTGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTaGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: RCLLSPPQLRRCDGL*PWRSRPACPPSCSR Trigger: ACGAGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGGGGAAAGCAAGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCCACTCAGCGCGGTACTaGCCCTCCCCCTCCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: CLLQILPAYLVYVKADCTHSARY*PSPSLL Trigger: CAAGAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTG...GGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCCCTCCCCCTCCCTCTaGAAGGAGGCAGAAGACGTG | + |
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Preference number: 5 (lower is better) Translates to: VPSSDPTCLLSLREGRLHPSPSL*KEAEDV Trigger: CACGTCTTCTGCCTCCTTCAAGAGGGAGGGGGAGGG...GTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | CTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCCATGATGGAGCCGTGGTaGACAGTTGCCAGGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: LQILPAYLVYVKADCTMPMMEPW*TVARMS Trigger: GGACATCCTGGCAACTGTCAACCACGGCTCCATCAT...GGGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACAGCTGTCGGAACATCTaGCGTGCCACGTCCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: VPSSDPTCLLSLREGRLHSCRNI*RATSSC Trigger: GCATGAGGACGTGGCACGCAAGATGTTCCGACAGCT...GTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | CTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCAGCCGGTGCTGGGTTTaGGCTCCAAGCTTGTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: LAPVPSSDPTCLLSLREGSRCWV*APSLWS Trigger: CGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCT...GCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCGTGGGCCAGCAGGCATaGTCCTCATTTACACTACCG | + |
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Preference number: 5 (lower is better) Translates to: SSDPTCLLSLREGRLHHAVGQQA*SSFTLP Trigger: CGGTAGTGTAAATGAGGACAATGCCTGCTGGCCCAC...GGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TTACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAAGGATGATGCGCCCATaGCTGTCCCGCAGGCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LLAPVPSSDPTCLLSLRERMMRP*LSRRQR Trigger: GCGCTGCCTGCGGGACAGCAATGGGCGCATCATCCT...TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | CTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCGTCTTGGTGTCCAGTTaGCACTCAGCGCGGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: LCLLQILPAYLVYVKADCVLVSS*HSARYL Trigger: CAAGTACCGCGCTGAGTGCAAACTGGACACCAAGAC...GCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATGCCTGTCATGCTAGGTGCTaGCTTTCCCCACCTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSDPTCLLSLREGRLHHACHARC*LSPPQL Trigger: GAGCTGAGGTGGGGAAAGCAAGCACCTAGCATGACA...GGCATGGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGACCCGCAGAAGGTCTaGCTGAGGATGATGCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: YLHLCLLQILPAYLVYVKDPQKV*LRMMRP Trigger: TGGGCGCATCATCCTCAGCAAGACCTTCTGCGGGTC...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TTACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGTTTTGGCTCCAAGCTaGTGGTCGGGCCGGTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: LLAPVPSSDPTCLLSLREVLAPS*WSGRWS Trigger: CGACCACCGGCCCGACCACAAGCTTGGAGCCAAAAC...TTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TACTTGCACCTGTGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGGCCTCAAGCCTGTCTaGGTGTCCAGTTTGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: YLHLCLLQILPAYLVYVKGLKPV*VSSLHS Trigger: TGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCC...CTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCACAGGTGCAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTTCAGATCCTACCTGCCTACTTAGTTTACGTGAAGGCCGACTGCACCATTGACGAATTTTACTaGCACCTGTGCCTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CLLQILPAYLVYVKADCTIDEFY*HLCLLQ Trigger: CTGAAGAAGGCACAGGTGCAAGTAAAATTCGTCAAT...GGTGCAGTCGGCCTTCACGTAAACTAAGTAGGCAGGTAGGATCTGAAGAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS-3UTR CAA 90 bp | AATCAAAATAGTGGTTTAATTGACGAATTTTACTTGCACCTGTGCCTTCTTCAGTCAGTAGGTGTTTTCTaGCGGTCGATGATCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: NQNSGLIDEFYLHLCLLQSVGVF*RSMILT Trigger: TGTCAAGATCATCGACCGCAAGAAAACACCTACTGA...CTGAAGAAGGCACAGGTGCAAGTAAAATTCGTCAATTAAACCACTATTTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | CGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTaGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSRAPPAAGAGF*LQACGRAGGRA Trigger: GGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 72 bp | TCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTaGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SFSGTTSSRCWV*APSLWSGRWSG Trigger: GCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 90 bp | GCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTaGGTGTCCAGTTTGCACTCAGCGCGGTACTTGCCCTCCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: APSLWSGRWSGLKPV*VSSLHSARYLPSPS Trigger: GGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 90 bp | TTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTaGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FSGTTSSRCWVLAPS*WSGRWSGLKPVLVS Trigger: GGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | ACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTaGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TSSRCWVLAPSL*SGRWSGLKPVL Trigger: CAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | CTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTaGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LFSFSGTTSSRC*VLAPSLWSGRW Trigger: CCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 72 bp | CGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTaGCACTCAGCGCGGTACTTGCCCTCCCCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RWSGLKPVLVSS*HSARYLPSPSL Trigger: GAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 90 bp | TGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTaGCACTCAGCGCGGTACTTGCCCTCCCCCTCCCTCTTGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: WSGRWSGLKPVLVSS*HSARYLPSPSLLKE Trigger: CTCCTTCAAGAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 90 bp | ATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTaGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ILFSFSGTTSSRCWV*APSLWSGRWSGLKP Trigger: AGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS GCA 72 bp | GGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTaGACTCAGCGCGGTACTTGCCCTCCCCCTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGRASSLSWCPV*TQRGTCPPPPS Trigger: AGAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | TGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTaGTGTCCAGTTTGCACTCAGCGCGGTACTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CGRAGGRASSLS*CPVCTQRGTCP Trigger: AGGGCAAGTACCGCGCTGAGTGCAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | CTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTaGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: LSPPQLRRCDGL*PWRSRPACPPS Trigger: GGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGGGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 72 bp | TTGCACTCAGCGCGGTACTTGCCCTCCCCCTCCCTCTaGAAGGAGGCAGAAGACGTGGCTTTGGGCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LHSARYLPSPSL*KEAEDVALGLG Trigger: CCCCAAGCCCAAAGCCACGTCTTCTGCCTCCTTCAAGAGGGAGGGGGAGGGCAAGTACCGCGCTGAGTGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS GCA 72 bp | AACCCTTCTTCCTTAGGACTGTGGCATCGTCCATGGTaGCAGGAGCGACTGGCGCCGCTGCCGTCTACATCC | + |
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Preference number: 6 (lower is better) Translates to: NPSSLGLWHRPW*QERLAPLPSTS Trigger: GGATGTAGACGGCAGCGGCGCCAGTCGCTCCTGGCACCATGGACGATGCCACAGTCCTAAGGAAGAAGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | TGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTaGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: CWVLAPSLWSGR*SGLKPVLVSSL Trigger: CAAACTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | CCACCTCAGCTCCGGAGATGTGATGGTCTTTGGCCCTaGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPQLRRCDGLWP*RSRPACPPSCS Trigger: AGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CCA 72 bp | TGTAACCCTTCTTCCTTAGGACTGTGGCATCGTCCATaGTGCCAGGAGCGACTGGCGCCGCTGCCGTCTACA | + |
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Preference number: 6 (lower is better) Translates to: CNPSSLGLWHRP*CQERLAPLPST Trigger: TGTAGACGGCAGCGGCGCCAGTCGCTCCTGGCACCATGGACGATGCCACAGTCCTAAGGAAGAAGGGTTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS CAA 72 bp | CACCACACACAACGGGGCCATTGTCATGCTAGGTGCTaGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: HHTQRGHCHARC*LSPPQLRRCDG Trigger: ACCATCACATCTCCGGAGCTGAGGTGGGGAAAGCAAGCACCTAGCATGACAATGGCCCCGTTGTGTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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| CDS GCA 72 bp | CTCGTAAGTCTTGATGATGGAGCCGTGGTTGACAGTTaGCAGGATGTCCATCTCCCGAGGAAGGAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVSLDDGAVVDS*QDVHLPRKESL Trigger: GAGAGATTCCTTCCTCGGGAGATGGACATCCTGGCAACTGTCAACCACGGCTCCATCATCAAGACTTACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399635.4 |
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