Pregenerated sensors for TSSK1B (Homo sapiens)
Ensembl gene IDs: ENSG00000212122Ensembl transcript IDs: ENST00000390666.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGTGCTCTTGCTGTCACTaGGCCGTTGCGGCCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: ELESEPPRLPPRVPASPWCSCCH*AVAASG Trigger: CCCACTGGCCGCAACGGCTCAGTGACAGCAAGAGCA...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCTGTCACTGAGCCGTTaGGGCCAGTGGGGACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ELESEPPRLPPRVPASPWLSLSR*GQWGPS Trigger: AGAGGGTCCCCACTGGCCGCAACGGCTCAGTGACAG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGACCCCCAACCCAGCCTaGTCCCCTGACCCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ELESEPPRLPPRVPASPWTPNPA*SPDPQS Trigger: AGACTGAGGGTCAGGGGACCAGGCTGGGTTGGGGGT...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACTCTGTGTCCAGCACCTaGTCCGGGTCACGCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSLARSGLPAGSRNCPGDSVSST*SGSRSG Trigger: CCCAGAGCGTGACCCGGAGCAGGTGCTGGACACAGA...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGCTCTGGCTCCACCCTTaGCTTCTTCAGAGCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SVWPGLASQQGHATAPGTLWLHP*LLQSLG Trigger: GCCCAAGCTCTGAAGAAGTCAAGGGTGGAGCCAGAG...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGGCTGTCACTGAGCCGTaGCGGCCAGTGGGGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: ELESEPPRLPPRVPASPWAVTEP*RPVGTL Trigger: GAGGGTCCCCACTGGCCGCAACGGCTCAGTGACAGC...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| 3UTR TCA 72 bp | CTTTCCTCCCATTTTCTCCAGTTGCCATGCTACTCCTaGGGATCTAGGATAATACTGAAAGAAGCACATATG | + |
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Preference number: 3 (lower is better) Translates to: LSSHFLQLPCYS*GSRIILKEAHM Trigger: CATATGTGCTTCTTTCAGTATTATCCTAGATCCTCAGGAGTAGCATGGCAACTGGAGAAAATGGGAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCAGTCTGGCCCGGTCTaGCCTCCCAGCAGGGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWQSGPV*PPSRVT Trigger: CGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGAGCCGTTGCGGCCAGTaGGGACCCTCTGCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWSRCGQ*GPSAET Trigger: TGTCTCAGCAGAGGGTCCCCACTGGCCGCAACGGCT...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGGGACCGCGAGCTCCATaGCGATGTAGACCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWGPRAP*RCRPCH Trigger: ATGGCAAGGTCTACATCGTCATGGAGCTCGCGGTCC...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCAGGCCTGCTGTTCCTaGCTCCTAGAGGCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWQACCS*LLEAKT Trigger: AGTCTTGGCCTCTAGGAGGCAGGAACAGCAGGCCTG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCAGCGTCATCCATGGTaGCAGGAATGCCCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWQRHPW*QECPVP Trigger: AGGCACTGGGCATTCCTGGCACCATGGATGACGCTG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCAGCAGCGTCATCCATaGTGCCAGGAATGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWQQRHP*CQECPV Trigger: CACTGGGCATTCCTGGCACCATGGATGACGCTGCTG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGATCTTGCCCAGAGCTaGAGTCGGAGCCCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDDLAQS*SRSPRG Trigger: GCCTCGGGGGCTCCGACTCCAGCTCTGGGCAAGATC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACTGCTCTTGCTGTCACTaGGCCGTTGCGGCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDCSCCH*AVAASG Trigger: CCCACTGGCCGCAACGGCTCAGTGACAGCAAGAGCA...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGCAGGGTCACGCAACTaGCCCGGGGACGATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDAGSRN*PGDDER Trigger: CCTTTCATCGTCCCCGGGGCAGTTGCGTGACCCTGC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGCAGCCCCGAGGCGCATaGGCCAGCAGTGTGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTQPRGA*ASSVLI Trigger: AATGAGCACACTGCTGGCCCATGCGCCTCGGGGCTG...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGAGATCCCCGTGCCTTaGGCTGCATCCAGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDEIPVP*AASSSG Trigger: GCCACTGCTGGATGCAGCCCAAGGCACGGGGATCTC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGTAGCCTCGTCGCTTaGGGACAGCAGCGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDGSLVA*GQQRHP Trigger: TGGATGACGCTGCTGTCCTCAAGCGACGAGGCTACC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGCCGCATACGCTGGTaGCCCACAGAAGGTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDGRIRW*PTEGLA Trigger: AGCAAGACCTTCTGTGGGTCACCAGCGTATGCGGCC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACCGAGCTTCGTCCTCATaGAGGGCTCCCCGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDRASSS*RAPRVL Trigger: CAAAACCCGGGGAGCCCTGCATGAGGACGAAGCTCG...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGCACGGGAGAACCATGTaGGTTACCAAGTTCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWHGRTM*VTKFKG Trigger: CCCCTTGAACTTGGTAACCCACATGGTTCTCCCGTG...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGCATCCAGCAGTGGCTaGGGATCTCGTCGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTASSSG*GSRRCG Trigger: TCCACATCGACGAGATCCTCAGCCACTGCTGGATGC...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACTCTCCCCCTCCTTGTTaGTGGCCACAGAGGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDSPPPC*WPQREI Trigger: GATCTCCCTCTGTGGCCATCAACAAGGAGGGGGAGA...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACCTCTGGCTCCACCCTTaGCTTCTTCAGAGCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDLWLHP*LLQSLG Trigger: GCCCAAGCTCTGAAGAAGTCAAGGGTGGAGCCAGAG...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACCACTCGCCTGTCAGGTaGTTGGAGCGTGGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDHSPVR*LERGKL Trigger: CAACTTCCCACGCTCCAAGCACCTGACAGGCGAGTG...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGGTAGACCTTGCCATGTaGTGTCTCAAAGATCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: ELESEPPRLPPRVPASPWVDLAM*CLKDLV Trigger: TACGAGATCTTTGAGACATCACATGGCAAGGTCTAC...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGCTGGTGGAACTTCTTaGGAGCTTCGTCCTCATGCA | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTAGGTS*ELRPHA Trigger: TGCATGAGGACGAAGCTCGCAAGAAGTTCCACCAGC...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGCCAAGGAAAGCTGGTaGAACTTCTTGCGAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDAKESW*NFLRAS Trigger: CGAAGCTCGCAAGAAGTTCCACCAGCTTTCCTTGGC...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACATGGCCAAGGAAAGCTaGTGGAACTTCTTGCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDMAKES*WNFLRA Trigger: AGCTCGCAAGAAGTTCCACCAGCTTTCCTTGGCCAT...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCACCCAGCCTGGTCCCCTaGCCCTCAGTCTGGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSPSLVP*PSVWPG Trigger: ACCGGGCCAGACTGAGGGTCAGGGGACCAGGCTGGG...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGCATGGGCCAGCAGTGTaGTCATTTACATCCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTHGPAV*SFTSWI Trigger: TATCCAGGATGTAAATGAGCACACTGCTGGCCCATG...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACACCCACAGAAGGTCTTaGTTAATGCCATTCGACCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDTHRRS*LMPFDH Trigger: GTGGTCGAATGGCATTAAGCAAGACCTTCTGTGGGT...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGAAAGTTTATGGATCTTaGCCAGAGCTGGAGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTKVYGS*PELESE Trigger: CTCCGACTCCAGCTCTGGGCAAGATCCATAAACTTT...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGTGCTCATTTACATCCTaGATAGAGAGTCCTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTCSFTS*IESPLG Trigger: GCCCAAAGGACTCTCTATCCAGGATGTAAATGAGCA...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACAGCAGTGGTTTAACATaGCCAGAATCTCAATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLARSGLPAGSRNCPGDSSGLT*PESQFP Trigger: GGGAAATTGAGATTCTGGCCATGTTAAACCACTGCT...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCACCGCAAGAAGCTCACTaGGCCCGCGTCTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSPQEAH*ARVSGG Trigger: GCCTCCAGAGACGCGGGCCCAGTGAGCTTCTTGCGG...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAAATGCCCAGTGCCTCTaGGGCTGCCCTCTACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSNAQCL*GCPLQP Trigger: GGGCTGTAGAGGGCAGCCTCAGAGGCACTGGGCATT...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATGGGCTGGCCAGGCCTaGTGTTCCTGCCTCCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSWAGQA*CSCLLE Trigger: CTCTAGGAGGCAGGAACAGCAGGCCTGGCCAGCCCA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATCTGTGTCCAGCACCTaGTCCGGGTCACGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSSVSST*SGSRSG Trigger: CCCAGAGCGTGACCCGGAGCAGGTGCTGGACACAGA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAACCCCCAACCCAGCCTaGTCCCCTGACCCTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSTPNPA*SPDPQS Trigger: AGACTGAGGGTCAGGGGACCAGGCTGGGTTGGGGGT...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAGGGCTCCCCGGGTTTTaGTTAACTCGAGGAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSGLPGF*LTRGGR Trigger: GCGACCTCCTCGAGTTAATCAAAACCCGGGGAGCCC...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCACCATGGTGCCAGGAATaGCCAGTGCCTCTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSPWCQE*PVPLRL Trigger: CAGCCTCAGAGGCACTGGGCATTCCTGGCACCATGG...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAGAGAGTCCTTTGGGCTaGCCAGGCCTGCTGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSESPLG*PGLLFL Trigger: CAGGAACAGCAGGCCTGGCCAGCCCAAAGGACTCTC...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAAGGATCTCGTCGATGTaGAGCCGCCGGTTGACGTCG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSRISSM*SRRLTS Trigger: CGACGTCAACCGGCGGCTCCACATCGACGAGATCCT...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGTTCTTTAAAAGTTTATaGATCTTGCCCAGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SVWPGLASQQGHATAPGTFFKSL*ILPRAG Trigger: TCCAGCTCTGGGCAAGATCCATAAACTTTTAAAGAA...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCACTCCATCTCATTCCCTaGGCCGCAAGAAGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSLHLIP*AARSSL Trigger: CAGTGAGCTTCTTGCGGCCCAGGGAATGAGATGGAG...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCACCCATTTTCTCCAGTTaGCATGCTACTCCTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSPIFSS*HATPED Trigger: ATCCTCAGGAGTAGCATGGCAACTGGAGAAAATGGG...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATTGCCATGCTACTCCTaGGGATCTAGGATAATACTG | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSLPCYS*GSRIIL Trigger: CAGTATTATCCTAGATCCTCAGGAGTAGCATGGCAA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATTAATGATGGAGCAGTaGTTTAACATGGCCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: FGLIHLGATGEPCGLPSSLMMEQ*FNMARI Trigger: GATTCTGGCCATGTTAAACCACTGCTCCATCATTAA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGCTGTCACTGAGCCGTaGCGGCCAGTGGGGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: SVWPGLASQQGHATAPGTAVTEP*RPVGTL Trigger: GAGGGTCCCCACTGGCCGCAACGGCTCAGTGACAGC...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | CTCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACTCTGCGGGGGCCTTCTaGCGGTCGATGATCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: LSLARSGLPAGSRNCPGDSAGAF*RSMILI Trigger: GATCAAGATCATCGACCGCAAGAAGGCCCCCGCAGA...GTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGGACCCACAGAAGGTCTaGCTTAATGCCATTCGACCA | + |
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Preference number: 5 (lower is better) Translates to: ELESEPPRLPPRVPASPWDPQKV*LNAIRP Trigger: TGGTCGAATGGCATTAAGCAAGACCTTCTGTGGGTC...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGGAACTCTCCCCCTCCTaGTTGATGGCCACAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SVWPGLASQQGHATAPGTELSPS*LMATEG Trigger: TCCCTCTGTGGCCATCAACAAGGAGGGGGAGAGTTC...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGTCCATAGTCGACGGCTaGCTGGGGAAACCCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SVWPGLASQQGHATAPGTSIVDG*LGKPRI Trigger: GATCCTGGGTTTCCCCAGCAAGCCGTCGACTATGGA...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGGAGTCGGAGCCCCCGAGGCTGCCGCCGAGAGTGCCCGCGAGCCCGTGGAAGCAGATTTTACTTTaGCATAGGAGCCCTCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: ELESEPPRLPPRVPASPWKQILL*HRSPLL Trigger: TAGGAGAGGGCTCCTATGCAAAAGTAAAATCTGCTT...CCACGGGCTCGCGGGCACTCTCGGCGGCAGCCTCGGGGGCTCCGACTCCAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TCAGTCTGGCCCGGTCTGGCCTCCCAGCAGGGTCACGCAACTGCCCCGGGGACGAAAAGTTTATGGATCTaGCCCAGAGCTGGAGTCGGA | + |
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Preference number: 5 (lower is better) Translates to: SVWPGLASQQGHATAPGTKSLWI*PRAGVG Trigger: TCCGACTCCAGCTCTGGGCAAGATCCATAAACTTTT...CGTCCCCGGGGCAGTTGCGTGACCCTGCTGGGAGGCCAGACCGGGCCAGACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS GCA 90 bp | TCTGAGGCTGCCCTCTACAGCCCCGAGGCGCATGGGCCAGCAGTGTaGTCATTTACATCCTGGATAGAGAGTCCTTTGGGCTGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SEAALYSPEAHGPAV*SFTSWIESPLGWPG Trigger: GCCTGGCCAGCCCAAAGGACTCTCTATCCAGGATGTAAATGAGCACACTGCTGGCCCATGCGCCTCGGGGCTGTAGAGGGCAGCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS CCA 90 bp | TACAGCCCCGAGGCGCATGGGCCAGCAGTGTGCTCATTTACATCCTaGATAGAGAGTCCTTTGGGCTGGCCAGGCCTGCTGTTCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: YSPEAHGPAVCSFTS*IESPLGWPGLLFLP Trigger: AGGCAGGAACAGCAGGCCTGGCCAGCCCAAAGGACTCTCTATCCAGGATGTAAATGAGCACACTGCTGGCCCATGCGCCTCGGGGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAGGAGATCCCCGTGCCTaGGGCTGCATCCAGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FGLIHLGATGEPCGLPSSGDPRA*GCIQQW Trigger: CCACTGCTGGATGCAGCCCAAGGCACGGGGATCTCC...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATGGATAGAGAGTCCTTaGGGCTGGCCAGGCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FGLIHLGATGEPCGLPSSWIESP*GWPGLL Trigger: CAGCAGGCCTGGCCAGCCCAAAGGACTCTCTATCCA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCAAGCTGGTGGAACTTCTaGCGAGCTTCGTCCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: FGLIHLGATGEPCGLPSSSWWNF*RASSSC Trigger: GCATGAGGACGAAGCTCGCAAGAAGTTCCACCAGCT...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS-3UTR CAA 90 bp | TTTGGCCTCATCCACCTAGGGGCCACGGGAGAACCATGTGGGTTACCAAGTTCATTATCGCTGCAAGGTTaGAACAGGAGAAAGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: FGLIHLGATGEPCGLPSSLSLQG*NRRKPV Trigger: TACTGGCTTTCTCCTGTTCAAACCTTGCAGCGATAA...TGAACTTGGTAACCCACATGGTTCTCCCGTGGCCCCTAGGTGGATGAGGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS GCA 72 bp | GCCCTCTACAGCCCCGAGGCGCATGGGCCAGCAGTGTaGTCATTTACATCCTGGATAGAGAGTCCTTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALYSPEAHGPAV*SFTSWIESPLG Trigger: GCCCAAAGGACTCTCTATCCAGGATGTAAATGAGCACACTGCTGGCCCATGCGCCTCGGGGCTGTAGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS CCA 72 bp | GAGGCGCATGGGCCAGCAGTGTGCTCATTTACATCCTaGATAGAGAGTCCTTTGGGCTGGCCAGGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EAHGPAVCSFTS*IESPLGWPGLL Trigger: CAGCAGGCCTGGCCAGCCCAAAGGACTCTCTATCCAGGATGTAAATGAGCACACTGCTGGCCCATGCGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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| CDS TCA 72 bp | CTCCTAAATTTATCCCCAGGAGGTAGCCTCGTCGCTTaGGGACAGCAGCGTCATCCATGGTGCCAGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: LLNLSPGGSLVA*GQQRHPWCQEC Trigger: GCATTCCTGGCACCATGGATGACGCTGCTGTCCTCAAGCGACGAGGCTACCTCCTGGGGATAAATTTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390666.4 |
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