RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSSC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000184281

Ensembl transcript IDs: ENST00000333256.11, ENST00000380992.5, ENST00000380996.9, ENST00000435795.5, ENST00000437110.5, ENST00000440813.1, ENST00000451491.2, ENST00000467308.1, ENST00000485682.6, ENST00000496468.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTaGAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: GRMLPRTAARATGAT*RLPPIPARQWPGCP
Trigger: GGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR CCA 90 bp GCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACCAGCCCCACTGGGAAGGCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: ATGATCRLPPIPARQ*PGCPLTSPTGKAAG
Trigger: TCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR GCA 90 bp CACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATaGTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: HPTPQELQQGLCLGG*CPELQPGPPVPPAG
Trigger: GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR GCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCAAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGGCAGCAGGATGGCAGTaGCCAGTGGGGTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TAARATGATCRLPPIPARAAGWQ*PVGSGW
Trigger: CCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGC...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQDGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSDGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCAATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp GAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: ELQPGPPVPPAGFLPFQLDGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...TAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR GCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGCAGCAGGATGGCAGTaGCCAGTGGGGTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: QELQQGLCLGGCCPELQPAAGWQ*PVGSGW
Trigger: CCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGC...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: PQELQQGLCLGGCCPELQIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR CCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR GCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR-3UTR GCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCCTTCAGCAAGGTCTCTaGTTGGGAGGATGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPLQQGL*LGGCCP
Trigger: TGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAG...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR GCA 72 bp CTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTaGAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: LPRTAARATGAT*RLPPIPARQWP
Trigger: TGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
3UTR GCA 72 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATaGTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCA +
Preference number: 3 (lower is better)
Translates to: PQELQQGLCLGG*CPELQPGPPVP
Trigger: TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCGGAGGCACCCTTGGTaGGGCAGGGCTCCGATGGGC +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGRRHPW*GRAPMG
Trigger: GCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCG...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCCGGAGGCACCCTTGGTaGGGCAGGGCTCCGATGGGC +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGRRHPW*GRAPMG
Trigger: GCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCG...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCCCAGCGCTCGGGGTGTaGCACGTAGTCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: EDAAQNCSQGHRCHLQASPALGV*HVVGDR
Trigger: CCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGG...GGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGTGGGCCACAGAGGATaGAGCCCGTCTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGVGHRG*SPSGRP
Trigger: GGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCAC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGCTCCCACAAGGAACTaGGCCGCCGCTCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGAPTRN*AAAPDA
Trigger: GGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR GCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGTGGGCCACAGAGGATaGAGCCCGTCTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CLGGCCPELQPGPPVPPAVGHRG*SPSGRP
Trigger: GGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCAC...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCAGGGCGGTGGCCTaGTTGCTCTGCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQAARAVA*LLCSLT
Trigger: GGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGC...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTGGCTCCGATGGGCCCTaGCCAGGCCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTGSDGP*PGLPLE
Trigger: CTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCC...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGGGCTCCGATGGGCCCTaGCCAGGCCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQGSDGP*PGLPLE
Trigger: CTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCC...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCAGGCTCCGATGGGCCCTaGCCAGGCCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPGSDGP*PGLPLE
Trigger: CTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCC...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCGGCCTCCATGGTGGCTaGCCCACTCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: MLPRTAARATGATCRLPPGLHGG*PTPQPL
Trigger: CAGAGGCTGAGGAGTGGGGCAGCCACCATGGAGGCC...GGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGAGGCAGTGGCCAGGCTaGCCCCTGACCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARRQWPG*PLTSPT
Trigger: AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCT...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCTCAGCGGCACAGGCGTaGTCGTCTCAGGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGSAAQA*SSQASE
Trigger: CTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCGTTCGCCCTCCACGCTaGGGGACGGCTCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPVRPPR*GTAHLF
Trigger: GAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAAC...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR CCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGGAATGGCTGCACCGTaGCTGGGAGGAGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGGMAAP*LGGGLT
Trigger: CGTCAGGCCTCCTCCCAGCCACGGTGCAGCCATTCC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR CCA 90 bp GAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGTGGGCCACAGAGGATaGAGCCCGTCTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ELQPGPPVPPAGFLPFQLVGHRG*SPSGRP
Trigger: GGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCAC...TAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCGGAAGGCCAGGGCGGTaGCCTGATTGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGGRPGR*PDCSAR
Trigger: GCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCC...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTAGGACACGCAGTCAGTaGGGGCAGCCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQARTRSQ*GQPGSG
Trigger: CCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCT...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCGCCCCTGTCTGTaGCAGGATTCCCAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLPRPCL*QDSQGR
Trigger: GCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGG...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGCAGCAGGATGGCAGTaGCCAGTGGGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGAAGWQ*PVGSGW
Trigger: CCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCCACGCCCCGGCCCTTaGGTCCGGCTCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAAPRPGP*VRLGSS
Trigger: GCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTGG...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR TCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGCGCTAGGGGCCGCTTaGAGCCTCCGTTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGALGAA*SLRCHS
Trigger: TGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTGCGCTAGGGGCCGCTTaGAGCCTCCGTTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLALGAA*SLRCHS
Trigger: TGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGC...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLSQASE*PGMASV
Trigger: AACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGA...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: MLPRTAARATGATCRLPPSQASE*PGMASV
Trigger: AACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGA...GGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCGGCTCACCTGTTCCTaGCTCAGCCATGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGRLTCS*LSHASP
Trigger: TGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCG...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR GCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCAGGCCTCCATGGTGGCTaGCCCACTCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPGLHGG*PTPQPL
Trigger: CAGAGGCTGAGGAGTGGGGCAGCCACCATGGAGGCC...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTGGCCTCCATGGTGGCTaGCCCACTCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPGLHGG*PTPQPL
Trigger: CAGAGGCTGAGGAGTGGGGCAGCCACCATGGAGGCC...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCAGTGCCTCCACCTCCTaGAGGCCTCCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGSASTS*RPPWWL
Trigger: CAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACT...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTCTACCAGGGAGCCAGTaGTTCCAGCCCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQALPGSQ*FQPTPH
Trigger: GTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAG...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCGGAAACCGAGTGCTCTaGCGGCCGAGCACCACGGCT +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTGNRVL*RPSTTA
Trigger: AGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCC...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGAGGACACGCAGTCAGTaGGGGCAGCCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARRTRSQ*GQPGSG
Trigger: CCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCT...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTAGGACACGCAGTCAGTaGGGGCAGCCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPRTRSQ*GQPGSG
Trigger: CCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCT...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCCTCGCCCCTGTCTGTaGCAGGATTCCCAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTPRPCL*QDSQGR
Trigger: GCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCACCGGCGGGAGACCTaGCACAGACCCACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQHRRET*HRPTVD
Trigger: GTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTG...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCACCGGCGGGAGACCTaGCACAGACCCACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTHRRET*HRPTVD
Trigger: GTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCACCGGCGGGAGACCTaGCACAGACCCACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPHRRET*HRPTVD
Trigger: GTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTG...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAADGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTGCAGCAGGATGGCAGTaGCCAGTGGGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPAAGWQ*PVGSGW
Trigger: CCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGC...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAAIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCGGCTCATCAGGACCTaGATCCTCCTCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCRLIRT*ILLPRQ
Trigger: CTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCG...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR TCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTCGGCTCATCAGGACCTaGATCCTCCTCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSRLIRT*ILLPRQ
Trigger: CTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCG...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR TCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGGCGCTAGGGGCCGCTTaGAGCCTCCGTTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARALGAA*SLRCHS
Trigger: TGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGC...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp ATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCACTGTGGACAGACCCTaGCAGTGCCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: MLPRTAARATGATCRLPPTVDRP*QCLHLL
Trigger: CAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGT...GGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARSQASE*PGMASV
Trigger: AACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGA...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGCGCTCGGGGTGTaGCACGTAGTCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQPALGV*HVVGDR
Trigger: CCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGG...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTAGTGCCTCCACCTCCTaGAGGCCTCCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPSASTS*RPPWWL
Trigger: CAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACT...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCGGTCCTCGGGGCTGCTaGTCTTGTTCCGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAAGPRGC*SCSGSG
Trigger: ACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACC...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCTGGGTCCTCGGGGCTaGTGCTCTTGTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAALGPRG*CSCSGS
Trigger: ACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAG...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTGCCACCGGTGCCACCTaGAGGCTTCCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTATGAT*RLPPIP
Trigger: TGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGC...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTGCTTGGGAGGATGCTaGCCAGAACTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQACLGGC*PELQPG
Trigger: CCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCTACCAGGGAGCCAGTaGTTCCAGCCCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTLPGSQ*FQPTPH
Trigger: GTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCACTACCAGGGAGCCAGTaGTTCCAGCCCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: CLGGCCPELQPGPPVPPALPGSQ*FQPTPH
Trigger: GTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAG...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGTAGTCCTGTGCGCATaGGCTCGCCCCTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGVVLCA*ARPSTP
Trigger: AGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTAC...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR GCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGAGGAGGCCTGTTCCTaGCTCAGCCATGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSEEACS*LSHASP
Trigger: TGGGGACGCATGGCTGAGGCAGGAACAGGCCTCCTC...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARRSAPA*PLFSCS
Trigger: TGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCG...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTRSAPA*PLFSCS
Trigger: TGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCG...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACGCCACACCTCTCTTaGCTGCTGGGTGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPTPHLS*LLGASG
Trigger: ACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGT...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTCTTCCAGGCTGTACTTaGTCCAGCGCTCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQALPGCT*SSARGV
Trigger: CACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAG...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTTCAGACCTCAGCACCTaGGTCCTCGGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTSDLST*VLGAAA
Trigger: AGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGA...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGTCAGACCTCAGCACCTaGGTCCTCGGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQSDLST*VLGAAA
Trigger: AGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGA...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQADGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTGATGGCAGTGGCCAGTaGGGTCAGGCTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPDGSGQ*GQAGPS
Trigger: AGATGGCCCAGCCTGACCCCACTGGCCACTGCCATC...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp GAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCGTTGACACTGGAGTGTaGTTGGACAGCCAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EDAAQNCSQGHRCHLQASVDTGV*LDSQAG
Trigger: GCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAAC...GGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTGTTGACACTGGAGTGTaGTTGGACAGCCAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLVDTGV*LDSQAG
Trigger: GCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAAC...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCCAGAGTCCGAGTCACTaGGGGAGACTGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGQSPSH*GRLCRK
Trigger: CTTCCGACACAGTCTCCCTCAGTGACTCGGACTCTG...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR TCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCAGGGCGGTGGCCTaGTTGCTCTGCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARARAVA*LLCSLT
Trigger: GGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGC...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCTCTTGGCTGCTGGGTaGCAGTGGTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGLLAAG*QWLTLE
Trigger: CTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAG...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCCTCTTGGCTGCTGGGTaGCAGTGGTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPLLAAG*QWLTLE
Trigger: CTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAG...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCCACACCTCTCTTGGCTaGTGGGTGCCAGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPHTSLG*WVPVVD
Trigger: GTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTG...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCCTCAGATGGAATGGCTaGACCGTGGCTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTLRWNG*TVAGRR
Trigger: CCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAG...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCTCCGTTGTCACTCATaGTGGTGTGGGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLLRCHS*WCGPQR
Trigger: CCTCTGTGGCCCACACCAGCATGAGTGACAACGGAG...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCACCAGCGCTCGGGGTGTaGCACGTAGTCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPPALGV*HVVGDR
Trigger: CCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGG...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: EDAAQNCSQGHRCHLQASLDSAS*CHGSQQ
Trigger: CTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAG...GGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTCTGGGTCCTCGGGGCTaGTGCTCTTGTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQALGPRG*CSCSGS
Trigger: ACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAG...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTTGCTTGGGAGGATGCTaGCCAGAACTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQACLGGC*PELQPG
Trigger: CCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTTGCTTGGGAGGATGCTaGCCAGAACTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPCLGGC*PELQPG
Trigger: CCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCCTCTGCTTGGGAGGATaGTGCCCAGAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGLCLGG*CPELQP
Trigger: TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAG...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCACGGCTTCCGCGCCTaGAGAACTACAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTHGFRA*RTTAPT
Trigger: TGTGGGAGCTGTAGTTCTGCAGGCGCGGAAGCCGTG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRRSAPA*PLFSCS
Trigger: TGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCG...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTACGCCACACCTCTCTTaGCTGCTGGGTGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSTPHLS*LLGASG
Trigger: ACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGT...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCGTTCGCCCTCCACGCTaGGGGACGGCTCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAAVRPPR*GTAHLF
Trigger: GAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAAC...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCGCCTCTCAGATGGAATaGCTGCACCGTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCASQME*LHRGWE
Trigger: CTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGC...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGCCTCTCAGATGGAATaGCTGCACCGTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CLGGCCPELQPGPPVPPAASQME*LHRGWE
Trigger: CTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGC...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTGCCTCTCAGATGGAATaGCTGCACCGTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTASQME*LHRGWE
Trigger: CTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGC...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTTCCAGGCTGTACTTaGTCCAGCGCTCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQLPGCT*SSARGV
Trigger: CACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAG...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCTTCCAGGCTGTACTTaGTCCAGCGCTCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCLPGCT*SSARGV
Trigger: CACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAG...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCTTCCTCTCGTGTCTaGCTTCGACCCCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQASSSRV*LRPLGL
Trigger: CAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGA...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCTCTTCCTCTCGTGTCTaGCTTCGACCCCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAASSSRV*LRPLGL
Trigger: CAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGA...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGTTGACACTGGAGTGTaGTTGGACAGCCAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: CLGGCCPELQPGPPVPPAVDTGV*LDSQAG
Trigger: GCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAAC...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCGATTGCTCTGCTCGCTaGCCTCGGTCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAADCSAR*PRSHLP
Trigger: TGGAAGATGTGACCGAGGTCAGCGAGCAGAGCAATC...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCCAGGGCGGTGGCCTaGTTGCTCTGCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQARAVA*LLCSLT
Trigger: GGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGC...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCATGGAGGGATCCTGGTTaGAGGAGGACACGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPWRDPG*RRTRSQ
Trigger: CTGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCA...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGACTGTGGACAGACCCTaGCAGTGCCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRTVDRP*QCLHLL
Trigger: CAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGT...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTCAACGGCTCAAGGCTaGTCGGCAGTCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LGGCCPELQPGPPVPPAGSTAQG*SAVSIL
Trigger: CAAGATGGAGACTGCCGAGCAGCCTTGAGCCGTTGA...GCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000380996.9
CDS-3UTR GCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCTCTTGGCTGCTGGGTaGCAGTGGTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCLLAAG*QWLTLE
Trigger: CTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAG...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCACACCTCTCTTGGCTaGTGGGTGCCAGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSHTSLG*WVPVVD
Trigger: GTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCGGCTCACCTGTTCCTaGCTCAGCCATGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAARLTCS*LSHASP
Trigger: TGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCG...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR GCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGCCCCATCGGGGACAGTaGTTCCACTTCAGCACCACC +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRPHRGQ*FHFSTT
Trigger: GGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGG...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR GCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGCTCAGATGGAATGGCTaGACCGTGGCTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRLRWNG*TVAGRR
Trigger: CCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAG...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCAAAGATGTCACGGCTaGGCTGGGAGAAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPQRCHG*AGRRWS
Trigger: GCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTG...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCAAAGATGTCACGGCTaGGCTGGGAGAAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTQRCHG*AGRRWS
Trigger: GCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCAAAGATGTCACGGCTaGGCTGGGAGAAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSQRCHG*AGRRWS
Trigger: GCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCTCCGTTGTCACTCATaGTGGTGTGGGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSLRCHS*WCGPQR
Trigger: CCTCTGTGGCCCACACCAGCATGAGTGACAACGGAG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTLDSAS*CHGSQQ
Trigger: CTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAG...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCTCTGCTTGGGAGGATaGTGCCCAGAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSLCLGG*CPELQP
Trigger: TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACTCTGCTTGGGAGGATaGTGCCCAGAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPLCLGG*CPELQP
Trigger: TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAG...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGTCAGCGGCACAGGCGTaGTCGTCTCAGGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQSAAQA*SSQASE
Trigger: CTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACACTGGAGTGTGATTaGACAGCCAAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPTLECD*TAKRAK
Trigger: CTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGT...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCACCTCTCTTGGCTGCTaGGTGCCAGTGGTTGACACT +
Preference number: 4 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAATSLGC*VPVVDT
Trigger: AGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGT...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTCTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQALMPLR*NGCTVA
Trigger: AGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAG...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp GAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCCTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: EDAAQNCSQGHRCHLQASLMPLR*NGCTVA
Trigger: AGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAG...GGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGATGTCACGGCTGCGCTaGGAGAAGGTGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQMSRLR*EKVELM
Trigger: CATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACAT...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCATGTCACGGCTGCGCTaGGAGAAGGTGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTMSRLR*EKVELM
Trigger: CATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACAT...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGATGTCACGGCTGCGCTaGGAGAAGGTGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: TAARATGATCRLPPIPARMSRLR*EKVELM
Trigger: CATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACAT...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTTCACTCATGCTGGTGTaGGCCACAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSSLMLV*ATEDGA
Trigger: GGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGA...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCATCACTCATGCTGGTGTaGGCCACAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: CLGGCCPELQPGPPVPPASLMLV*ATEDGA
Trigger: GGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGA...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp GGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCGTTGTCACTCATGCTaGTGTGGGCCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GRMLPRTAARATGATCRLRCHSC*CGPQRM
Trigger: CATCCTCTGTGGCCCACACCAGCATGAGTGACAACG...AAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCGGAAGGCCAGGGCGGTaGCCTGATTGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSGRPGR*PDCSAR
Trigger: GCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCC...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTCAGCTGGAGGGATCCTaGTTGAAGGAGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSQLEGS*LKEDTQ
Trigger: CTGCGTGTCCTCCTTCAACCAGGATCCCTCCAGCTG...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCAGCTGGAGGGATCCTaGTTGAAGGAGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSQLEGS*LKEDTQ
Trigger: CTGCGTGTCCTCCTTCAACCAGGATCCCTCCAGCTG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCGGCAGTCTCCATCTTaGTCGGCGCCGCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARRQSPS*SAPHLR
Trigger: ACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR TCA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACTGGGTGCCAGTGGTTaGCACTGGAGTGTGATTGGA +
Preference number: 4 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPLGASG*HWSVIG
Trigger: TCCAATCACACTCCAGTGTCAACCACTGGCACCCAG...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGCAGAGTCCGAGTCACTaGGGGAGACTGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRQSPSH*GRLCRK
Trigger: CTTCCGACACAGTCTCCCTCAGTGACTCGGACTCTG...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR TCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGGAGGGATCCTGGTTaGAGGAGGACACGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRWRDPG*RRTRSQ
Trigger: CTGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCA...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTACTCCGTTGTCACTCATaGTGGTGTGGGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: ELQPGPPVPPAGFLPFQLLRCHS*WCGPQR
Trigger: CCTCTGTGGCCCACACCAGCATGAGTGACAACGGAG...TAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTT +
Preference number: 4 (lower is better)
Translates to: EDAAQNCSQGHRCHLQASDSASC*HGSQQF
Trigger: AAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTC...GGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTT +
Preference number: 4 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQADSASC*HGSQQF
Trigger: AAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTC...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCGGTCCTCGGGGCTGCTaGTCTTGTTCCGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAAGPRGC*SCSGSG
Trigger: ACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACC...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTaGAGGCTTCCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARATGAT*RLPPIP
Trigger: TGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGC...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTCTTCAGCAAGGTCTCTaGTTGGGAGGATGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTLQQGL*LGGCCP
Trigger: TGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAG...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCCTTCAGCAAGGTCTCTaGTTGGGAGGATGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTLQQGL*LGGCCP
Trigger: TGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAG...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCGGACGTGTAGTCCTGTaGGCATGCGCTCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSGRVVL*ACARPS
Trigger: AGAGGGGCGAGCGCATGCGCACAGGACTACACGTCC...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR GCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCTCTGGGAAACCGAGTaGTCTGCCGGCCGAGCACCA +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARLWETE*SAGRAP
Trigger: TGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTACACTGGAGTGTGATTaGACAGCCAAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQATLECD*TAKRAK
Trigger: CTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGT...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTACCTCTCTTGGCTGCTaGGTGCCAGTGGTTGACACT +
Preference number: 4 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSTSLGC*VPVVDT
Trigger: AGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGT...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCACGCCACACCTCTCTTaGCTGCTGGGTGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAATPHLS*LLGASG
Trigger: ACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGT...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGAATGGCTGCACCGTaGCTGGGAGGAGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPGMAAP*LGGGLT
Trigger: CGTCAGGCCTCCTCCCAGCCACGGTGCAGCCATTCC...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGCCTCGCCCCTGTCTGTaGCAGGATTCCCAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQPRPCL*QDSQGR
Trigger: GCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGG...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCTCTTGTTCCGGAAGTaGTCTCGACTCCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCLLFRK*SRLRFL
Trigger: CAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAG...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGTCAGACCTCAGCACCTaGGTCCTCGGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQSDLST*VLGAAA
Trigger: AGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGA...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCAGCAAGGTCTCTGCTTaGGAGGATGCTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TGATCRLPPIPARQWPGCSKVSA*EDAAQN
Trigger: GTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCGCGCTCAGCCCTCTaGGAAACCGAGTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQARSAL*ETECSA
Trigger: GGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGC...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR GCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCCCCATCGGGGACAGTaGTTCCACTTCAGCACCACC +
Preference number: 4 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSPHRGQ*FHFSTT
Trigger: GGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGG...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000451491.2
CDS-3UTR GCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCGGTCCTCGGGGCTGCTaGTCTTGTTCCGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSGPRGC*SCSGSG
Trigger: ACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACC...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp GAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTACGTTGTCACTCATGCTaGTGTGGGCCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ELQPGPPVPPAGFLPFQLRCHSC*CGPQRM
Trigger: CATCCTCTGTGGCCCACACCAGCATGAGTGACAACG...TAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTTTCGACCCCTCGGACTaGTTTGGTGAAGATGACCCT +
Preference number: 4 (lower is better)
Translates to: PPVPPAGFLPFQLGSGQAFDPSD*FGEDDP
Trigger: AGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAA...AGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTTTCGACCCCTCGGACTaGTTTGGTGAAGATGACCCT +
Preference number: 4 (lower is better)
Translates to: RMLPRTAARATGATCRLPFDPSD*FGEDDP
Trigger: AGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAA...AGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCTTCGACCCCTCGGACTaGTTTGGTGAAGATGACCCT +
Preference number: 4 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTFDPSD*FGEDDP
Trigger: AGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAA...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGATTCCAGCTAGGCAGTaGCCAGGCTGCCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQIPARQ*PGCPLT
Trigger: GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAAT...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGAGCAAGGTCTCTGCTTaGGAGGATGCTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRSKVSA*EDAAQN
Trigger: GTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp CCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCTGGAGGGATCCTGGTTaGAGGAGGACACGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PRSFSKVSAWEDAAQNCSWRDPG*RRTRSQ
Trigger: CTGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCA...GCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGACTGTGGACAGACCCTaGCAGTGCCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQTVDRP*QCLHLL
Trigger: CAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGT...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCACACCTCTCTTGGCTaGTGGGTGCCAGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQHTSLG*WVPVVD
Trigger: GTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTG...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGCTCAGATGGAATGGCTaGACCGTGGCTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQLRWNG*TVAGRR
Trigger: CCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAG...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARLDSAS*CHGSQQ
Trigger: CTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCACTGGGTCCTCGGGGCTaGTGCTCTTGTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPLGPRG*CSCSGS
Trigger: ACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAG...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCACCTCTCTTGGCTGCTaGGTGCCAGTGGTTGACACT +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAATSLGC*VPVVDT
Trigger: AGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGT...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGTCACTCATGCTGGTGTaGGCCACAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQSLMLV*ATEDGA
Trigger: GGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGA...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCGTTGTCACTCATGCTaGTGTGGGCCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAARCHSC*CGPQRM
Trigger: CATCCTCTGTGGCCCACACCAGCATGAGTGACAACG...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCTGGGTGCCAGTGGTTaGCACTGGAGTGTGATTGGA +
Preference number: 4 (lower is better)
Translates to: PQELQQGLCLGGCCPELQLGASG*HWSVIG
Trigger: TCCAATCACACTCCAGTGTCAACCACTGGCACCCAG...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR TCA 90 bp ATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCAAACAAGACCGGAATTaGCCAAGAACAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: MLPRTAARATGATCRLPPKQDRN*PRTGRG
Trigger: TCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTT...GGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR GCA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCTTCAGCAAGGTCTCTaGTTGGGAGGATGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GASARSLLGRMLPRTAARLQQGL*LGGCCP
Trigger: TGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCGGAAGGCCAGGGCGGTaGCCTGATTGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPGRPGR*PDCSAR
Trigger: GCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCC...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCAACGACGGCATTTGTTaGGGAAACAAGACCGGAATT +
Preference number: 4 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGNDGIC*GNKTGI
Trigger: AATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTT...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR TCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGATTGCTCTGCTCGCTaGCCTCGGTCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQDCSAR*PRSHLP
Trigger: TGGAAGATGTGACCGAGGTCAGCGAGCAGAGCAATC...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCATCAACGGCTCAAGGCTaGTCGGCAGTCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPSTAQG*SAVSIL
Trigger: CAAGATGGAGACTGCCGAGCAGCCTTGAGCCGTTGA...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000380996.9
CDS-3UTR GCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCAGTGCCTCCACCTCCTaGAGGCCTCCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPSASTS*RPPWWL
Trigger: CAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACT...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAACACTGGAGTGTGATTaGACAGCCAAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPTLECD*TAKRAK
Trigger: CTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGT...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCACTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: QELQQGLCLGGCCPELQPLMPLR*NGCTVA
Trigger: AGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAG...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGAGCAAGGTCTCTGCTTaGGAGGATGCTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQSKVSA*EDAAQN
Trigger: GTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR GCA 90 bp AGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTT +
Preference number: 4 (lower is better)
Translates to: RSFSKVSAWEDAAQNCSQDSASC*HGSQQF
Trigger: AAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTC...CTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCCAGCTGGAGGGATCCTaGTTGAAGGAGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPQLEGS*LKEDTQ
Trigger: CTGCGTGTCCTCCTTCAACCAGGATCCCTCCAGCTG...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCTCTTCCTCTCGTGTCTaGCTTCGACCCCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPSSSRV*LRPLGL
Trigger: CAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGA...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CCA 90 bp CAGAAAGACCCAAAACCTTTATTGTCCCTACCAGGGAGCCAGTGCTTCCAGCCCCTCTTGTTCCGGAAGTaGTCTCGACTCCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QKDPKPLLSLPGSQCFQPLLFRK*SRLRFL
Trigger: CAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAG...GGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS GCA 90 bp CGGGGACCGGAGGCACCCTTGGTGAGGCAGGGCTCCGATGGGCCCTaGCCAGGCCTTCCACTGGAGACCGGCCTGAGGGCGCTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RGPEAPLVRQGSDGP*PGLPLETGLRALGA
Trigger: GGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS CCA 90 bp CCATCTTGGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTaGGAAACCGAGTGCTCTGCCGGCCGAGCACCACGGCTTCCGCGC +
Preference number: 5 (lower is better)
Translates to: PSWSAPHLRAARSAL*ETECSAGRAPRLPR
Trigger: GCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS GCA 90 bp GAACTGGGCCGCCGCTCCCGACGCCTGTCGGGACGTGTAGTCCTGTaGGCATGCGCTCGCCCCTCTACTCCTCCACGCCCCGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: ELGRRSRRLSGRVVL*ACARPSTPPRPGPW
Trigger: CCAAGGGCCGGGGCGTGGAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS GCA 90 bp GCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGAAACCGAGTaGTCTGCCGGCCGAGCACCACGGCTTCCGCGCCTGCAGAACTAC +
Preference number: 5 (lower is better)
Translates to: APHLRAARSALWETE*SAGRAPRLPRLQNY
Trigger: GTAGTTCTGCAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS TCA 90 bp GCGCTCGGGGTGTGCCACGTAGTCGGGGACCGGAGGCACCCTTGGTaGGGCAGGGCTCCGATGGGCCCTGCCCAGGCCTTCCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: ALGVCHVVGDRRHPW*GRAPMGPAQAFHWR
Trigger: TCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS GCA 90 bp CAAGGCTGCTCGGCAGTCTCCATCTTGGTCGGCGCCGCACCTCCGTaGGGCGCGCTCAGCCCTCTGGGAAACCGAGTGCTCTGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: QGCSAVSILVGAAPP*GALSPLGNRVLCRP
Trigger: CGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS GCA 90 bp CGTCCCGTGTTCGCCCTCCACGCTGGGGGACGGCTCACCTGTTCCTaGCTCAGCCATGCGTCCCCAGGGCCACGCCACACCTCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: RPVFALHAGGRLTCS*LSHASPGPRHTSLG
Trigger: GCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333256.11
ENST00000435795.5
ENST00000437110.5
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 90 bp GCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGAAACCGAGTGCTCTaGCGGCCGAGCACCACGGCTTCCGCGCCTGCAGAACTACAGCTC +
Preference number: 5 (lower is better)
Translates to: APPCGALSPLGNRVL*RPSTTASAPAELQL
Trigger: GAGCTGTAGTTCTGCAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS CCA 90 bp AGAGCGTGCACCTTCCGGCTCAAGGCTGCTCGGCAGTCTCCATCTTaGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: RACTFRLKAARQSPS*SAPHLRAARSALWE
Trigger: TTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGGAAGGTGCACGCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS CCA 90 bp CAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCAACGGCTCAAGGCTGCTCGGCAGTC +
Preference number: 5 (lower is better)
Translates to: QRHRRGRLRPRSAPA*PLFSCSTAQGCSAV
Trigger: GACTGCCGAGCAGCCTTGAGCCGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000380996.9
CDS CCA 90 bp CGGAAGGCAGCGTGTCATACTCCGTCCCGTGTTCGCCCTCCACGCTaGGGGACGGCTCACCTGTTCCTGCCTCAGCCATGCGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RKAACHTPSRVRPPR*GTAHLFLPQPCVPR
Trigger: CCTGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGCTGCCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333256.11
ENST00000435795.5
ENST00000437110.5
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS-3UTR CAA 90 bp CCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGGGACCGGAGGCACCCTaGGTGAGGCAGGGCTCCGAT +
Preference number: 5 (lower is better)
Translates to: PELQPGPPVPPAGFLPFQGPEAP*VRQGSD
Trigger: ATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCC...CTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTGGACCGGAGGCACCCTaGGTGAGGCAGGGCTCCGAT +
Preference number: 5 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTGPEAP*VRQGSD
Trigger: ATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCC...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS GCA 90 bp GAGTTCAACCAGAACCCTGCTTCCCAGATTCGCACTCCCGTCCTCTaGAGCGGAACGCCGCCGCGGCCAGAAGCAGCCTGGTCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: EFNQNPASQIRTPVL*SGTPPRPEAAWSAG
Trigger: CCCCGCTGACCAGGCTGCTTCTGGCCGCGGCGGCGTTCCGCTGCAGAGGACGGGAGTGCGAATCTGGGAAGCAGGGTTCTGGTTGAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS CCA 90 bp TGTTCAGCTGCTCAACGGCTCAAGGCTGCTCGGCAGTCTCCATCTTaGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: CSAAQRLKAARQSPS*SAPHLRAARSALWE
Trigger: TTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGTTGAGCAGCTGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CAA 90 bp TGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCGCTAGGGGCCGCTaGAAGCCTCCGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: CLGGCCPELQPGPPVPPAGARGR*KPPLSL
Trigger: GAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCC...TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTGGCGCTAGGGGCCGCTaGAAGCCTCCGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTGARGR*KPPLSL
Trigger: GAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCC...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS TCA 90 bp CCAGGCCTTCCACTGGAGACCGGCCTGAGGGCGCTAGGGGCCGCTTaGAGCCTCCGTTGTCACTCATGCTGGTGTGGGCCACAGAGGATG +
Preference number: 5 (lower is better)
Translates to: PGLPLETGLRALGAA*SLRCHSCWCGPQRM
Trigger: CATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS-3UTR CAA 90 bp AGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCTCTTCCAGGCTGTACTaGGTCCAGCGCTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: RLPPIPARQWPGCPLTSPSSRLY*VQRSGC
Trigger: ACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGA...GGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCACCCCTCGGACTGGTTaGGTGAAGATGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PVPPAGFLPFQLGSGQAATPRTG*VKMTLP
Trigger: GGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGT...GGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS TCA 90 bp CCCAGGGCCACGCCACACCTCTCTTGGCTGCTGGGTGCCAGTGGTTaGCACTGGAGTGTGATTGGACAGCCAAGCGGGCCAAGTGGACGG +
Preference number: 5 (lower is better)
Translates to: PRATPHLSWLLGASG*HWSVIGQPSGPSGR
Trigger: CCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 90 bp CTGGGCCATCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTaGTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGHLPLRPQHLGPRG*CSCSGSGLDSASCC
Trigger: GCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS GCA 90 bp CTGGGCCATCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTaGTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: LGHLPLRPQHLGPRG*CSCSGSGLDSASSV
Trigger: GACCGAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS CCA 90 bp ATGTCACGGCTGCGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCTGGGAGGAGGCCTGACGGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: MSRLRWEKVELMPLR*NGCTVAGRRPDGGE
Trigger: CTCACCCCCGTCAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333256.11
ENST00000435795.5
ENST00000437110.5
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 90 bp GTGGTCTCGACTCCGCTTCCTCGGTCACATCTTCCAGGCTGTACTTaGTCCAGCGCTCGGGGTGTGCCACGTAGTCGGGGACCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: VVSTPLPRSHLPGCT*SSARGVPRSRGPEA
Trigger: TGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAGGAAGCGGAGTCGAGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS-3UTR CAA 90 bp CCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCGCTGGGTGCCAGTGGTaGACACTGGAGTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: PGPPVPPAGFLPFQLGSGAGCQW*TLECDW
Trigger: CCAATCACACTCCAGTGTCAACCACTGGCACCCAGC...GCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCAGCCCCACTTCTTCCAGGCTGTACTaGGTCCAGCGCTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: LPPIPARQWPGCPLTSPTSSRLY*VQRSGC
Trigger: ACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGA...AGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp GGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCAACCCCTCGGACTGGTTaGGTGAAGATGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GLCLGGCCPELQPGPPVPTPRTG*VKMTLP
Trigger: GGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGT...TGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp ACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGACCCCTCGGACTGGTTaGGTGAAGATGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: TAARATGATCRLPPIPARTPRTG*VKMTLP
Trigger: GGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGT...CCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTCGGGGCTGCTGCTCTaGTTCCGGAAGTGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSSGLLL*FRKWSR
Trigger: TCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGA...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTTCGGGGCTGCTGCTCTaGTTCCGGAAGTGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: QPGPPVPPAGFLPFQLGSSGLLL*FRKWSR
Trigger: TCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGA...ACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGTCGGCAGTCTCCATCTaGGTCGGCGCCGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: GASARSLLGRMLPRTAARSAVSI*VGAAPP
Trigger: CGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGA...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS GCA 90 bp CGGGGCTGCTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAGTTTCCACCGGCGGGAGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: RGCCSCSGSGLDSAS*CHGSQQFPPAGDLA
Trigger: TGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS GCA 90 bp GGCCATCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTGCTaGTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GHLPLRPQHLGPRGC*SCSGSGLDSASCCH
Trigger: ATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS GCA 90 bp CTGCGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGATGGAATGGCTaGACCGTGGCTGGGAGGAGGCCTGTTCCTGCCTCAGCCATGCGT +
Preference number: 5 (lower is better)
Translates to: LRWEKVELMPLRWNG*TVAGRRPVPASAMR
Trigger: ACGCATGGCTGAGGCAGGAACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000380996.9
ENST00000440813.1
CDS GCA 90 bp GGCCATCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTGCTaGTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTCGGTCACA +
Preference number: 5 (lower is better)
Translates to: GHLPLRPQHLGPRGC*SCSGSGLDSASSVT
Trigger: TGTGACCGAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS GCA 90 bp CGGGGCTGCTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAGTTTCCACCGGCGGGAGACCTCGGT +
Preference number: 5 (lower is better)
Translates to: RGCCSCSGSGLDSAS*CHGSQQFPPAGDLG
Trigger: ACCGAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467308.1
CDS CCA 90 bp ACGGCTGCGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGATGGAATaGCTGCACCGTGGCTGGGAGGAGGCCTGTTCCTGCCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: TAALGEGGAHASQME*LHRGWEEACSCLSH
Trigger: ATGGCTGAGGCAGGAACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000380996.9
ENST00000440813.1
CDS-3UTR CAA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCCGCTTGAAGCCTCCGTaGTCACTCATGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTRLKPP*SLMLVW
Trigger: CCACACCAGCATGAGTGACAACGGAGGCTTCAAGCG...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGGGCGCTAGGGGCCGCTaGAAGCCTCCGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PQELQQGLCLGGCCPELQGARGR*KPPLSL
Trigger: GAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCC...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCCTGGAGGGATCCTGGTaGAAGGAGGACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QNCSQGHRCHLQASSHSSLEGSW*KEDTQS
Trigger: TGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCAG...GCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp ACCGGTGCCACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCTGGAGGGATCCTGGTaGAAGGAGGACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TGATCRLPPIPARQWPGCLEGSW*KEDTQS
Trigger: TGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCAG...GCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS GCA 90 bp GGCAGTCAAAGATGTCACGGCTGCGCTGGGAGAAGGTGGAGCTCATaGCTCTCAGATGGAATGGCTGCACCGTGGCTGGGAGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSQRCHGCAGRRWSS*LSDGMAAPWLGGGL
Trigger: CAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 90 bp GGCTGCTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTTCCACCGGCGGGAGACCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: GCCSCSGSGLDSASC*HGSQQFPPAGDLAQ
Trigger: CTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS GCA 90 bp GGCTGCTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTTCCACCGGCGGGAGACCTCGGTCAC +
Preference number: 5 (lower is better)
Translates to: GCCSCSGSGLDSASC*HGSQQFPPAGDLGH
Trigger: GTGACCGAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467308.1
CDS CCA 90 bp CCCCCTCCAGGCAGTCAAAGATGTCACGGCTGCGCTGGGAGAAGGTaGAGCTCATGCCTCTCAGATGGAATGGCTGCACCGTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PPPGSQRCHGCAGRR*SSCLSDGMAAPWLG
Trigger: TCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 90 bp ATGTCACGGCTGCGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCTGGGAGGAGGCCTGTTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: MSRLRWEKVELMPLR*NGCTVAGRRPVPAS
Trigger: TGAGGCAGGAACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000380996.9
ENST00000440813.1
CDS CCA 90 bp CAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCAACTCATTTAATGGTGCCAACCCTC +
Preference number: 5 (lower is better)
Translates to: QRHRRGRLRPRSAPA*PLFSCSTHLMVPTL
Trigger: GAGGGTTGGCACCATTAAATGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000435795.5
ENST00000440813.1
CDS CCA 90 bp CTGCAGCCAAGGCCCTGGCATCTGAGGGTCAAGCTCTCAGGAAAGTaGGGTGTCGACCATCACCTTGAGCAGCCCGGCTCAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LQPRPWHLRVKLSGK*GVDHHLEQPGSRLL
Trigger: GAGCAGCCTTGAGCCGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCTTGGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435795.5
ENST00000437110.5
CDS-3UTR CAA 90 bp TGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGTGCCACCTGCAGGCTGACCCAAAACCTTTATaGTCCCTACCAGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: WEDAAQNCSQGHRCHLQADPKPL*SLPGSQ
Trigger: CTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTC...AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS CCA 90 bp CTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCATaGAAGCCAACAGTTTCCACCGGCGGGAGACCTGGCACAGACCCA +
Preference number: 5 (lower is better)
Translates to: LLLFRKWSRLRFLLP*KPTVSTGGRPGTDP
Trigger: TGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS CCA 90 bp ACCTCAGCACCTGGGTCCTCGGGGCTGCTGCTCTTGTTCCGGAAGTaGTCTCGACTCCGCTTCCTGCTGCCATGGAAGCCAACAGTTTCC +
Preference number: 5 (lower is better)
Translates to: TSAPGSSGLLLLFRK*SRLRFLLPWKPTVS
Trigger: GGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS-3UTR CAA 90 bp CACACCCCACACCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCGCTGGGTGCCAGTGGTaGACACTGGAGTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: HTPHPRSFSKVSAWEDAAAGCQW*TLECDW
Trigger: CCAATCACACTCCAGTGTCAACCACTGGCACCCAGC...GGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS TCA 90 bp CACACCTCTCTTGGCTGCTGGGTGCCAGTGGTTGACACTGGAGTGTaGTTGGACAGCCAAGCGGGCCAAGTGGACGGAGCCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: HTSLGCWVPVVDTGV*LDSQAGQVDGALMK
Trigger: CTTCATCAGGGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 90 bp CTGGAAGATCCCCGGGAGCTCCCAAGGAATCTGCAGCCAAGGCCCTaGCATCTGAGGGTCAAGCTCTCAGGAAAGTGGGGTGTCGACCAT +
Preference number: 5 (lower is better)
Translates to: LEDPRELPRNLQPRP*HLRVKLSGKWGVDH
Trigger: ATGGTCGACACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTCCCGGGGATCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435795.5
ENST00000437110.5
CDS-3UTR CAA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCGCTTGAAGCCTCCGTaGTCACTCATGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GASARSLLGRMLPRTAARRLKPP*SLMLVW
Trigger: CCACACCAGCATGAGTGACAACGGAGGCTTCAAGCG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCGCTTGAAGCCTCCGTaGTCACTCATGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PQELQQGLCLGGCCPELQRLKPP*SLMLVW
Trigger: CCACACCAGCATGAGTGACAACGGAGGCTTCAAGCG...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp GGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGCTGGAGGGATCCTGGTaGAAGGAGGACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: GASARSLLGRMLPRTAARLEGSW*KEDTQS
Trigger: TGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCAG...CCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS-3UTR CAA 90 bp AGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGGGCCACCGGGACCCAAAACCTTTATaGTCCCTACCAGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SKVSAWEDAAQNCSQGHRDPKPL*SLPGSQ
Trigger: CTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTC...CCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS CCA 90 bp CTGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCATaGAAGCCAACAGTTTCCACCGGCGGGAGACCTCGGTCACATCTT +
Preference number: 5 (lower is better)
Translates to: LLLFRKWSRLRFLLP*KPTVSTGGRPRSHL
Trigger: AAGATGTGACCGAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467308.1
CDS-3UTR CAA 90 bp ACCTGCAGGCTTCCTCCCATTCCAGCTAGGCAGTGGCCAGGCTGCCCCCTGACCGAAACAAGACCGGAATaGACCAAGAACAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TCRLPPIPARQWPGCPLTETRPE*TKNRKR
Trigger: CCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTC...GGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS-3UTR CAA 90 bp CCCCAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCGGAAACGACGGCATTaGTTGGGGAAACAAGACCGG +
Preference number: 5 (lower is better)
Translates to: PQELQQGLCLGGCCPELQRKRRH*LGKQDR
Trigger: CCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCG...CTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS TCA 90 bp CGGCAACGAGTGGAAGGTAGAGTTGACTCCTTCATGTCCGTAGGCTaGAGGAAGCCGTCTCTTTCTCCACATGAACGCAGAGCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RQRVEGRVDSFMSVG*RKPSLSPHERRARP
Trigger: AGGCCGGGCTCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAGTCAACTCTACCTTCCACTCGTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS-3UTR CAA 90 bp CAGGAGCTTCAGCAAGGTCTCTGCTTGGGAGGATGCTGCCCAGAACTGCAGCCAGACCCAAAACCTTTATaGTCCCTACCAGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: QELQQGLCLGGCCPELQPDPKPL*SLPGSQ
Trigger: CTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTC...TGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS TCA 90 bp ACTCATTTAATGGTGCCAACCCTCTGCAGGCAGGCTTGGAGCTACTaGGCGATTTTGGTAGTAAGCAGCCACCCAGGGCTTGAACCCAGG +
Preference number: 5 (lower is better)
Translates to: THLMVPTLCRQAWSY*AILVVSSHPGLEPR
Trigger: CCTGGGTTCAAGCCCTGGGTGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000435795.5
CDS TCA 90 bp CTCCTTCATGTCCGTAGGCTGAAGGAAGCCGTCTCTTTCTCCACATaGACGCAGAGCCCGGCCTTTCTCCACTATATGTGCCAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLHVRRLKEAVSFST*TQSPAFLHYMCQQD
Trigger: GTCTTGCTGGCACATATAGTGGAGAAAGGCCGGGCTCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS GCA 90 bp AGGAACGGGGCGGGGGAAATAATTTGCCCAAGTCACACAGTATGTTaGAGACGAAGCTGGAGTTCAACCAGAACCCTGCTTCCCAGATTC +
Preference number: 5 (lower is better)
Translates to: RNGAGEIICPSHTVC*RRSWSSTRTLLPRF
Trigger: GAATCTGGGAAGCAGGGTTCTGGTTGAACTCCAGCTTCGTCTGCAACATACTGTGTGACTTGGGCAAATTATTTCCCCCGCCCCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS GCA 72 bp CTCCGTGCGGCGCGCTCAGCCCTCTGGGAAACCGAGTaGTCTGCCGGCCGAGCACCACGGCTTCCGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LRAARSALWETE*SAGRAPRLPRL
Trigger: CAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS GCA 72 bp GAGGCACCCTTGGTGAGGCAGGGCTCCGATGGGCCCTaGCCAGGCCTTCCACTGGAGACCGGCCTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: EAPLVRQGSDGP*PGLPLETGLRA
Trigger: CGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS GCA 72 bp CGCCGCTCCCGACGCCTGTCGGGACGTGTAGTCCTGTaGGCATGCGCTCGCCCCTCTACTCCTCCACGCCCC +
Preference number: 6 (lower is better)
Translates to: RRSRRLSGRVVL*ACARPSTPPRP
Trigger: GGGGCGTGGAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS CCA 72 bp GGGACCGGAGGCACCCTTGGTGAGGCAGGGCTCCGATaGGCCCTGCCCAGGCCTTCCACTGGAGACCGGCCT +
Preference number: 6 (lower is better)
Translates to: GTGGTLGEAGLR*ALPRPSTGDRP
Trigger: AGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS GCA 72 bp TTCGCCCTCCACGCTGGGGGACGGCTCACCTGTTCCTaGCTCAGCCATGCGTCCCCAGGGCCACGCCACACC +
Preference number: 6 (lower is better)
Translates to: FALHAGGRLTCS*LSHASPGPRHT
Trigger: GGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333256.11
ENST00000435795.5
ENST00000437110.5
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 72 bp TGCGGCGCGCTCAGCCCTCTGGGAAACCGAGTGCTCTaGCGGCCGAGCACCACGGCTTCCGCGCCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: CGALSPLGNRVL*RPSTTASAPAE
Trigger: TTCTGCAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS CAA 72 bp CACCTTCCGGCTCAAGGCTGCTCGGCAGTCTCCATCTaGGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: HLPAQGCSAVSI*VGAAPPCGALS
Trigger: GCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGGAAGGTG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS CAA 90 bp AAGAGCGTGCACCTTCCGGCTCAAGGCTGCTCGGCAGTCTCCATCTaGGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: KSVHLPAQGCSAVSI*VGAAPPCGALSPLG
Trigger: TCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGGAAGGTGCACGCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS GCA 72 bp TCGGCAGTCTCCATCTTGGTCGGCGCCGCACCTCCGTaGGGCGCGCTCAGCCCTCTGGGAAACCGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: SAVSILVGAAPP*GALSPLGNRVL
Trigger: GAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000380996.9
CDS CAA 72 bp TGCTCAACGGCTCAAGGCTGCTCGGCAGTCTCCATCTaGGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: CSTAQGCSAVSI*VGAAPPCGALS
Trigger: GCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGTTGAGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS CAA 90 bp CTGTTCAGCTGCTCAACGGCTCAAGGCTGCTCGGCAGTCTCCATCTaGGTCGGCGCCGCACCTCCGTGCGGCGCGCTCAGCCCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: LFSCSTAQGCSAVSI*VGAAPPCGALSPLG
Trigger: TCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCAGCCTTGAGCCGTTGAGCAGCTGAACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS GCA 72 bp TCAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTTCAGCTGCTCAACGGC +
Preference number: 6 (lower is better)
Translates to: SAAQAWSSQASE*PGMASVQLLNG
Trigger: GCCGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000380996.9
CDS TCA 72 bp CCACTGGAGACCGGCCTGAGGGCGCTAGGGGCCGCTTaGAGCCTCCGTTGTCACTCATGCTGGTGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: PLETGLRALGAA*SLRCHSCWCGP
Trigger: TGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS GCA 72 bp TCAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTTCAGCTGCTCAACTGC +
Preference number: 6 (lower is better)
Translates to: SAAQAWSSQASE*PGMASVQLLNC
Trigger: GCAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496468.1
CDS CCA 72 bp AGGCGTGGTCGTCTCAGGCCTCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCAACGGCTCAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: RRGRLRPRSAPA*PLFSCSTAQGC
Trigger: GCAGCCTTGAGCCGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333256.11
ENST00000380996.9
CDS CCA 72 bp GCGTGTCATACTCCGTCCCGTGTTCGCCCTCCACGCTaGGGGACGGCTCACCTGTTCCTGCCTCAGCCATGC +
Preference number: 6 (lower is better)
Translates to: ACHTPSRVRPPR*GTAHLFLPQPC
Trigger: GCATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333256.11
ENST00000435795.5
ENST00000437110.5
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 72 bp AGGCGTGGTCGTCTCAGGCCTCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCAACTGCAGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RRGRLRPRSAPA*PLFSCSTAGGW
Trigger: CCACCCACCTGCAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496468.1
CDS CAA 72 bp TCCACTGGAGACCGGCCTGAGGGCGCTAGGGGCCGCTaGAAGCCTCCGTTGTCACTCATGCTGGTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: STGDRPEGARGR*KPPLSLMLVWA
Trigger: GGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS CAA 90 bp ACTGGAGACCGGCCTGAGGGCGCTAGGGGCCGCTTGAAGCCTCCGTaGTCACTCATGCTGGTGTGGGCCACAGAGGATGGAGCCCGTCTG +
Preference number: 6 (lower is better)
Translates to: TGDRPEGARGRLKPP*SLMLVWATEDGARL
Trigger: CAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS CAA 90 bp CCCAGGCCTTCCACTGGAGACCGGCCTGAGGGCGCTAGGGGCCGCTaGAAGCCTCCGTTGTCACTCATGCTGGTGTGGGCCACAGAGGAT +
Preference number: 6 (lower is better)
Translates to: PRPSTGDRPEGARGR*KPPLSLMLVWATED
Trigger: ATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000496468.1
CDS GCA 72 bp TCAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTTCAGCTGCTCAACTCA +
Preference number: 6 (lower is better)
Translates to: SAAQAWSSQASE*PGMASVQLLNS
Trigger: TGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380992.5
ENST00000435795.5
ENST00000440813.1
ENST00000485682.6
CDS GCA 72 bp TCAGCGGCACAGGCGTGGTCGTCTCAGGCCTCGGAGTaGCCCGGCATGGCCTCTGTTCAGCTGCTCAACTTC +
Preference number: 6 (lower is better)
Translates to: SAAQAWSSQASE*PGMASVQLLNF
Trigger: GAAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437110.5
CDS CAA 90 bp CCCCAGGGCCACGCCACACCTCTCTTGGCTGCTGGGTGCCAGTGGTaGACACTGGAGTGTGATTGGACAGCCAAGCGGGCCAAGTGGACG +
Preference number: 6 (lower is better)
Translates to: PQGHATPLLAAGCQW*TLECDWTAKRAKWT
Trigger: CGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 72 bp CCCCAGGGCCACGCCACACCTCTCTTGGCTGCTGGGTaGCAGTGGTTGACACTGGAGTGTGATTGGACAGCC +
Preference number: 6 (lower is better)
Translates to: PQGHATPLLAAG*QWLTLECDWTA
Trigger: GGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 72 bp CCTGGGTCCTCGGGGCTGCTGCTCTTGTTCCGGAAGTaGTCTCGACTCCGCTTCCTGCTGCCATGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PGSSGLLLLFRK*SRLRFLLPWKP
Trigger: TGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS CCA 72 bp TCAGGCTGGGCCATCTCCCTCTCAGACCTCAGCACCTaGGTCCTCGGGGCTGCTGCTCTTGTTCCGGAAGTG +
Preference number: 6 (lower is better)
Translates to: SGWAISLSDLST*VLGAAALVPEV
Trigger: CACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS CAA 90 bp TCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTGCTGCTCTaGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCATGGAAG +
Preference number: 6 (lower is better)
Translates to: SPSQTSAPGSSGLLL*FRKWSRLRFLLPWK
Trigger: CTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS TCA 72 bp CTTGGCTGCTGGGTGCCAGTGGTTGACACTGGAGTGTaGTTGGACAGCCAAGCGGGCCAAGTGGACGGAGCC +
Preference number: 6 (lower is better)
Translates to: LGCWVPVVDTGV*LDSQAGQVDGA
Trigger: GGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS GCA 72 bp TGGCCGCCCCCTCCAGGCAGTCAAAGATGTCACGGCTaGGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: WPPPPGSQRCHG*AGRRWSSCLSD
Trigger: ATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 72 bp GGCCACGCCACACCTCTCTTGGCTGCTGGGTGCCAGTaGTTGACACTGGAGTGTGATTGGACAGCCAAGCGG +
Preference number: 6 (lower is better)
Translates to: GHATPLLAAGCQ*LTLECDWTAKR
Trigger: CCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 72 bp TTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCATaGAAGCCAACAGTTTCCACCGGCGGGAGACCTGGC +
Preference number: 6 (lower is better)
Translates to: FRKWSRLRFLLP*KPTVSTGGRPG
Trigger: GCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
CDS CCA 72 bp CTGCGCTGGGAGAAGGTGGAGCTCATGCCTCTCAGATaGAATGGCTGCACCGTGGCTGGGAGGAGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LRWEKVELMPLR*NGCTVAGRRPV
Trigger: AACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000380996.9
ENST00000440813.1
CDS CCA 72 bp ACTCCGCTTCCTCGGTCACATCTTCCAGGCTGTACTTaGTCCAGCGCTCGGGGTGTGCCACGTAGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: TPLPRSHLPGCT*SSARGVPRSRG
Trigger: TCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAGGAAGCGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS CCA 72 bp CCTGGGTCCTCGGGGCTGCTGCTCTTGTTCCGGAAGTaGTCTCGACTCCGCTTCCTCGGTCACATCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PGSSGLLLLFRK*SRLRFLGHIFQ
Trigger: CTGGAAGATGTGACCGAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS CCA 72 bp CCCCGGGAGCTCCCAAGGAATCTGCAGCCAAGGCCCTaGCATCTGAGGGTCAAGCTCTCAGGAAAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: PRELPRNLQPRP*HLRVKLSGKWG
Trigger: ACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435795.5
ENST00000437110.5
CDS CCA 72 bp TTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTGCCATaGAAGCCAACAGTTTCCACCGGCGGGAGACCTCGG +
Preference number: 6 (lower is better)
Translates to: FRKWSRLRFLLP*KPTVSTGGRPR
Trigger: CCGAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467308.1
CDS CAA 72 bp CACGCCACACCTCTCTTGGCTGCTGGGTGCCAGTGGTaGACACTGGAGTGTGATTGGACAGCCAAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: HATPLLAAGCQW*TLECDWTAKRA
Trigger: GGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CAA 90 bp TCTCCCTCTCAGACCTCAGCACCTGGGTCCTCGGGGCTGCTGCTCTaGTTCCGGAAGTGGTCTCGACTCCGCTTCCTCGGTCACATCTTC +
Preference number: 6 (lower is better)
Translates to: SPSQTSAPGSSGLLL*FRKWSRLRFLGHIF
Trigger: GAAGATGTGACCGAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380992.5
CDS TCA 72 bp ACGCCACACCTCTCTTGGCTGCTGGGTGCCAGTGGTTaGCACTGGAGTGTGATTGGACAGCCAAGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: TPHLSWLLGASG*HWSVIGQPSGP
Trigger: TGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333256.11
ENST00000380992.5
ENST00000380996.9
ENST00000435795.5
ENST00000437110.5
ENST00000440813.1
ENST00000451491.2
ENST00000485682.6
ENST00000496468.1
CDS CCA 72 bp AGGCCCTGGCATCTGAGGGTCAAGCTCTCAGGAAAGTaGGGTGTCGACCATCACCTTGAGCAGCCCGGCTCA +
Preference number: 6 (lower is better)
Translates to: RPWHLRVKLSGK*GVDHHLEQPGS
Trigger: TGAGCCGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435795.5
ENST00000437110.5
CDS GCA 72 bp TCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTGCTaGCATGGAAGCCAACAGTTTCCACCGGCGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SCSGSGLDSASC*HGSQQFPPAGD
Trigger: GTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS GCA 72 bp TGCTCTTGTTCCGGAAGTGGTCTCGACTCCGCTTCCTaGTGCCATGGAAGCCAACAGTTTCCACCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: CSCSGSGLDSAS*CHGSQQFPPAG
Trigger: TCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333256.11
ENST00000380996.9
ENST00000451491.2
ENST00000467308.1
CDS CCA 72 bp AGGCGTGGTCGTCTCAGGCCTCGGAGTGCCCCGGCATaGCCTCTGTTCAGCTGCTCAACTCATTTAATGGTG +
Preference number: 6 (lower is better)
Translates to: RRGRLRPRSAPA*PLFSCSTHLMV
Trigger: CACCATTAAATGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380992.5
ENST00000435795.5
ENST00000440813.1
CDS TCA 72 bp ATGGTGCCAACCCTCTGCAGGCAGGCTTGGAGCTACTaGGCGATTTTGGTAGTAAGCAGCCACCCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: MVPTLCRQAWSY*AILVVSSHPGL
Trigger: AAGCCCTGGGTGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000435795.5
CDS TCA 72 bp CTCAACTCAGTTCCTCTGAGGCGCGACTCTCCTCAGTaGAGAAGCCACCCCAGTGAAAGGGGATACGCAGCA +
Preference number: 6 (lower is better)
Translates to: LNSVPLRRDSPQ*RSHPSERGYAA
Trigger: TGCTGCGTATCCCCTTTCACTGGGGTGGCTTCTTCACTGAGGAGAGTCGCGCCTCAGAGGAACTGAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS TCA 72 bp GTCCGTAGGCTGAAGGAAGCCGTCTCTTTCTCCACATaGACGCAGAGCCCGGCCTTTCTCCACTATATGTGC +
Preference number: 6 (lower is better)
Translates to: VRRLKEAVSFST*TQSPAFLHYMC
Trigger: GCACATATAGTGGAGAAAGGCCGGGCTCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS GCA 72 bp AATCAGGCAGGAGGGCCACTTATAAGCTGCTTGCTGTaGGGGGTGAGCAGTCGTATTCCACAAAGAGCGTGC +
Preference number: 6 (lower is better)
Translates to: NQAGGPLISCLL*GVSSRIPQRAC
Trigger: GCACGCTCTTTGTGGAATACGACTGCTCACCCCGCACAGCAAGCAGCTTATAAGTGGCCCTCCTGCCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000435795.5
CDS CCA 72 bp CGGCTCGGAAGCAGCCCCGGAAACGACGGCATTTGTTaGGGAAACAAGACCGGAATTGACCAAGAACAGGAA +
Preference number: 6 (lower is better)
Translates to: RLGSSPGNDGIC*GNKTGIDQEQE
Trigger: TTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380996.9
CDS CAA 90 bp CAGCTGCTCAACTCATTTAATGGTGCCAACCCTCTGCAGGCAGGCTaGGAGCTACTGAGCGATTTTGGTAGTAAGCAGCCACCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: QLLNSFNGANPLQAG*ELLSDFGSKQPPRA
Trigger: AGCCCTGGGTGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGTTGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000435795.5
CDS TCA 72 bp GTGGAAGGTAGAGTTGACTCCTTCATGTCCGTAGGCTaGAGGAAGCCGTCTCTTTCTCCACATGAACGCAGA +
Preference number: 6 (lower is better)
Translates to: VEGRVDSFMSVG*RKPSLSPHERR
Trigger: TCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAGTCAACTCTACCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS GCA 72 bp GCGGGGGAAATAATTTGCCCAAGTCACACAGTATGTTaGAGACGAAGCTGGAGTTCAACCAGAACCCTGCTT +
Preference number: 6 (lower is better)
Translates to: AGEIICPSHTVC*RRSWSSTRTLL
Trigger: AAGCAGGGTTCTGGTTGAACTCCAGCTTCGTCTGCAACATACTGTGTGACTTGGGCAAATTATTTCCCCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485682.6
CDS CAA 72 bp AACTCATTTAATGGTGCCAACCCTCTGCAGGCAGGCTaGGAGCTACTGAGCGATTTTGGTAGTAAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: NSFNGANPLQAG*ELLSDFGSKQP
Trigger: TGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380992.5
ENST00000435795.5