Pregenerated sensors for TSR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000007520Ensembl transcript IDs: ENST00000007390.3, ENST00000566296.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTGGGGGCTCTCCTTGGCATTGGCCAAGAACTCCTGCTCCGCCTaGAGCACCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SWGLSLALAKNSCSA*STSSGLPQAAYLSR Trigger: CCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR GCA 90 bp | ATCTCCTCCTCCTGGGGGCTCTCCTTGGCATTGGCCAAGAACTCCTaGTCCGCCTGCAGCACCTCCTCCGGGCTGCCGCAGGCCGCGTAC | + |
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Preference number: 1 (lower is better) Translates to: ISSSWGLSLALAKNS*SACSTSSGLPQAAY Trigger: GTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR GCA 90 bp | CATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCCGGGCTaGCGCAGGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: HWPRTPAPPAAPPPG*RRPRTCPGAGGSGP Trigger: TGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CCA 90 bp | TCAGTGTCCGAGGGCAGCCGATCTCCTCCTCCTGGGGGCTCTCCTTaGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCCG | + |
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Preference number: 1 (lower is better) Translates to: SVSEGSRSPPPGGSP*HWPRTPAPPAAPPP Trigger: CGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGGCTGCCCTCGGACACTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CAA 90 bp | GTCCGAGGGCAGCCGATCTCCTCCTCCTGGGGGCTCTCCTTGGCATaGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCCGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VRGQPISSSWGLSLA*AKNSCSACSTSSGL Trigger: CAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGGCTGCCCTCGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CAA 90 bp | ATCAGTGTCCGAGGGCAGCCGATCTCCTCCTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ISVRGQPISSSWGLS*ALAKNSCSACSTSS Trigger: GGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGGCTGCCCTCGGACACTGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGATCTCCTCCTCCTGAACTCCTGCTCCGCCTaGAGCACCTCCTCCGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PQTHHCHQCPRAADLLLLNSCSA*STSSGL Trigger: CAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTT...CAGGAGGAGGAGATCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTGTCATCAGTACTTGTCCAGGAGCTaGCGGTTCAGGTCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLRARRQALGPQTHHCHQYLSRS*RFRSKK Trigger: CTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTA...CTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGCCGTTTCTTGATTCCTTTCCAAACCTCAGCCGGGGCCCTGGCCTCACTCGGCGCCAGGCCCTaGGTCCTCAGACGCATCACT | + |
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Preference number: 2 (lower is better) Translates to: SLCRFLIPFQTSAGALASLGARP*VLRRIT Trigger: AGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAG...TGAGGCCAGGGCCCCGGCTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGATCTCCTCCTCCTGGGCTCTCCTTGGCATTaGCCAAGAACTCCTGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: PQTHHCHQCPRAADLLLLGSPWH*PRTPAP Trigger: CGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCC...CAGGAGGAGGAGATCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTCTGCCGTTTCTTGATTCCTTTCCAAACCTCAGCCGGGGCCCTGGCCTCCCGATCTCCTCCTCCTaGGGGCTCTCCTTGGCATTG | + |
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Preference number: 2 (lower is better) Translates to: VSLPFLDSFPNLSRGPGLPISSS*GLSLAL Trigger: CAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGG...GAGGCCAGGGCCCCGGCTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CCA 72 bp | GCTGCTGCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTaGGTCCTCAGACGCATCACTGTCATCAGTGTCCGA | + |
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Preference number: 3 (lower is better) Translates to: AAAGSSALGARP*VLRRITVISVR Trigger: TCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCCTGGGTCCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGATCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: PGPGSSDASLSSVSEGSRSWGLS*ALAKNS Trigger: GGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGA...TCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CCA 72 bp | GTCATCAGTGTCCGAGGGCAGCCGATCTCCTCCTCCTaGGGGCTCTCCTTGGCATTGGCCAAGAACTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: VISVRGQPISSS*GLSLALAKNSC Trigger: GCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGGCTGCCCTCGGACACTGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | GCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTGTCGGGACGCGTACTGCTTaGCCACGGGGCTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: AGSSALGARPWVLRRITVGTRTA*PRGSAP Trigger: TGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCC...GACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGGCTCCACGGAAGCCTaGAGCGCGGCGCCGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPGSTEA*SAAPTS Trigger: GGAGGTCGGCGCCGCGCTGCAGGCTTCCGTGGAGCC...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGCGCCGGGGGTCGCAGTaGCCCAACTCCCACATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPRRGSQ*PNSHMA Trigger: GGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCG...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTGTCCCGATCTCCTCCTCCTaGGGGCTCTCCTTGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: AGSSALGARPWVLRRITVPISSS*GLSLAL Trigger: CAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGG...GACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CAA 72 bp | TGCAGCACCTCCTCCGGGCTGCCGCAGGCCGCGTACTaGTCCAGGAGCTGGCGGTTCAGGTCCAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CSTSSGLPQAAY*SRSWRFRSKKP Trigger: GGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR TCA 90 bp | GGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCCAAGAAGCCCTTGCCCCACCCAGGAGCAGTCGATaGCGGCGACCCCAGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: GRVLVQELAVQVQEALAPPRSSR*RRPQTA Trigger: CGCAGTCTGGGGTCGCCGTCATCGACTGCTCCTGGG...TGGGGCAAGGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | TGCCGCAGGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCCAAGAAGCCCTGCACCTCCTCCGGGCTaGCGCAGGCCGCGTACTTGT | + |
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Preference number: 4 (lower is better) Translates to: CRRPRTCPGAGGSGPRSPAPPPG*RRPRTC Trigger: ACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGC...AGGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | CGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCCAAGAAAACTCCTGCTCCGCCTaGAGCACCTCCTCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RAAAGRVLVQELAVQVQENSCSA*STSSGL Trigger: CAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTT...TTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | CAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGCCCAACTCCCACATaGCCAGCGTGCAGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: QLCWKCGENPDSSVLPAAGPTPT*PACRAA Trigger: CGCTGCCCTGCACGCTGGCCATGTGGGAGTTGGGCC...GGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCATAGTTCACGGGGTTaGCGGCCACCAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPPGCRRPRTCPGAGGSGHSSRG*RPPGRA Trigger: TGCCCTACCTGGTGGCCGCCAACCCCGTGAACTATG...ACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| 3UTR CAA 72 bp | CGAGGGCAGCCGATCTCCTCCTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGQPISSSWGLS*ALAKNSCSACS Trigger: GCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGGCTGCCCTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGGGACGCGTACTGCTTaGCCACGGGGCTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPGTRTA*PRGSAP Trigger: TGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCC...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTACGATGCAGAAGGTaGCAGCAAACGCTTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: LLLAPPRSAPGPGSSDASLRCRR*QQTLPR Trigger: GCGTGGAAGCGTTTGCTGCCACCTTCTGCATCGTAG...TGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCTGGGTCCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGACCTCTTCACAGCAGCTaGTGCTGGCTCCTCCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PGPGSSDASLSSVSEGSRPLHSS*CWLLRA Trigger: AGCGCGGAGGAGCCAGCAGCAGCTGCTGTGAAGAGG...TCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGACCCATGGCGCGGACCTaGGGTGCCGGGGACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QPQRAEAARPIYVPHVSRPMART*GAGDSP Trigger: TGGGGAGTCCCCGGCACCCCAGGTCCGCGCCATGGG...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTGTCATCAGTGGGCTCTCCTTGGCATTaGCCAAGAACTCCTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PPRSAPGPGSSDASLSSVGSPWH*PRTPAP Trigger: CGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCC...CACTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | GCCCTGGGTCCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGATCTCCTCGGCGCCAGGCCCTaGGTCCTCAGACGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: ALGPQTHHCHQCPRAADLLGARP*VLRRIT Trigger: AGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAG...GAGATCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR TCA 90 bp | CCGCCTGCAGCACCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTACTTCCGCAGCAAAATaGCAGCAAGGTCTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PPAAPPPGCRRPRTCPGATSAAK*QQGLES Trigger: GCTTTCCAGACCTTGCTGTCATTTTGCTGCGGAAGT...AGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | CAGGACACAGAGCACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGAACTCCTGCTCCGCCTaGAGCACCTCCTCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QDTEHSCAGSVGRTRTAQNSCSA*STSSGL Trigger: CAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTT...CTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTGCTCTGTGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGGCAACAGGCGCAAGTaGCTCCCTCGCATCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPGNRRK*LPRIFP Trigger: TGGGAAGATGCGAGGGAGCCACTTGCGCCTGTTGCC...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGCATAGTTCACGGGGTTaGCGGCCACCAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPHSSRG*RPPGRA Trigger: TGCCCTACCTGGTGGCCGCCAACCCCGTGAACTATG...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR TCA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGACCCAGGAGCAGTCGATaGCGGCGACCCCAGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: QPQRAEAARPIYVPHVSRPRSSR*RRPQTA Trigger: CGCAGTCTGGGGTCGCCGTCATCGACTGCTCCTGGG...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR TCA 90 bp | CCGCCTGCAGCACCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTCTCTCTGCCGTTTCTTaGTTCCTTTCCAAACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PPAAPPPGCRRPRTCPGALSAVS*FLSKPQ Trigger: CTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAG...AGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGAAGACCGCCGAATCTGTaGCCCAGGCGCAGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QPQRAEAARPIYVPHVSRRPPNL*PRRRQR Trigger: GCGCTGCCTGCGCCTGGGCCACAGATTCGGCGGTCT...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGAGAGCACAGCTGTGCTaGAAGTGTGGGGAGAACCCG | + |
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Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPRAQLC*KCGENP Trigger: CGGGTTCTCCCCACACTTCCAGCACAGCTGTGCTCT...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTGCGGGGGACGCGTACTaGTTGCCCACGGGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQRAEAARPIYVPHVSRFAGDAY*LPTGLS Trigger: GCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGC...AAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTGCCGTCAGCCGCCCCTaGCTCCACGGAAGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PQRAEAARPIYVPHVSRFAVSRP*LHGSLQ Trigger: CTGCAGGCTTCCGTGGAGCCAGGGGCGGCTGACGGC...AAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCTGGGTCCTCAGACGCATCACTGTCATCAGTGTCCGAGGGCAGCCGATCTCCTGGCAACAGGCGCAAGTaGCTCCCTCGCATCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PGSSDASLSSVSEGSRSPGNRRK*LPRIFP Trigger: TGGGAAGATGCGAGGGAGCCACTTGCGCCTGTTGCC...AGGAGATCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACAATGACAGCAAGGTCTaGAAAGCCTACGATGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CCWLLRARRQALGPQTHHNDSKV*KAYDAE Trigger: TTCTGCATCGTAGGCTTTCCAGACCTTGCTGTCATT...GTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR GCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTCCAGCTTGCGGCCCGTaGAGCGCCGGGGGTCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSPACGP*SAGGRS Trigger: ACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGG...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGACGGACAGCTCAGTCCTaGCAGCAGCCGCAAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QPQRAEAARPIYVPHVSRRTAQS*QQPQRA Trigger: GGCTCTTTGCGGCTGCTGGCAGGACTGAGCTGTCCG...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCACAGAGCACAGCTGTaGTGGAAGTGTGGGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQHRAQL*WKCGEN Trigger: GTTCTCCCCACACTTCCAGCACAGCTGTGCTCTGTG...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCTACGATGCAGAAGGTaGCAGCAAACGCTTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQLRCRR*QQTLPR Trigger: GCGTGGAAGCGTTTGCTGCCACCTTCTGCATCGTAG...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCTGGGGGCTCTCCTTGGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTTACTTGTCCAGGAGCTaGCGGTTCAGGTCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGSPWHWPRTPAPPAAPYLSRS*RFRSKK Trigger: CTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTA...AGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CCA 90 bp | CAGGACACAGAGCACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCGATCTCCTCCTCCTaGGGGCTCTCCTTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QDTEHSCAGSVGRTRTAQSISSS*GLSLAL Trigger: CAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGA...CTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTGCTCTGTGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGTGGCCACAGGCCTGTTaGGGTTTCCAAACTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQWPQAC*GFQTLS Trigger: GGAGAGAGTTTGGAAACCCCAACAGGCCTGTGGCCA...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR TCA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGTCCAAACTCTCTCCCTaGATCCACATCGAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPSKLSP*IHIEGI Trigger: GATCCCTTCGATGTGGATTCAGGGAGAGAGTTTGGA...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTCCGAGGGCAGCCGGGTaGTGGCCACAGGCCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSPRAAG*WPQACW Trigger: CCAACAGGCCTGTGGCCAGCACCCGGCTGCCCTCGG...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGTACTTGTCCAGGAGCTaGCGGTTCAGGTCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQYLSRS*RFRSKK Trigger: CTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTA...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR TCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGACTTCCGCAGCAAAATaGCAGCAAGGTCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQTSAAK*QQGLES Trigger: GCTTTCCAGACCTTGCTGTCATTTTGCTGCGGAAGT...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTGCACCTCCTCCGGGCTaGCGCAGGCCGCGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSAPPPG*RRPRTC Trigger: ACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGC...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTAGGGCAGCCGGGTGCTaGCCACAGGCCTGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSRAAGC*PQACWG Trigger: ACCCCAACAGGCCTGTGGCCAGCACCCGGCTGCCCT...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTCGGCGCCAGGCCCTaGGTCCTCAGACGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: RKEPRLPGPFMSLMSLDFLGARP*VLRRIT Trigger: AGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAG...AAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR TCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCTCTCTGCCGTTTCTTaGTTCCTTTCCAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQLSAVS*FLSKPQ Trigger: CTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAG...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTGCCTGCAGCTTCATTTaGGAGAGCGCCGAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQRAEAARPIYVPHVSRFACSFI*ESAEAG Trigger: TCCTGCCTCGGCGCTCTCGCAAATGAAGCTGCAGGC...AAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTGCTGTGCTGGAAGTGTaGGGAGAACCCGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQRAEAARPIYVPHVSRFAVLEV*GEPGQL Trigger: GAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGC...AAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTCCTCTTCACAGCAGCTaGTGCTGGCTCCTCCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSPLHSS*CWLLRA Trigger: AGCGCGGAGGAGCCAGCAGCAGCTGCTGTGAAGAGG...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR GCA 90 bp | CACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGAAAAATATATGTGTCTaGAACCCTCAGTCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSCAGSVGRTRTAQSCQQKNICV*NPQSLC Trigger: GCAGAGAGACTGAGGGTTGCAGACACATATATTTTT...CTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTGGCTCTCCTTGGCATTaGCCAAGAACTCCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRAEAARPIYVPHVSRFSGSPWH*PRTPAP Trigger: CGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCC...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CCA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGAAATGACAGCAAGGTCTaGAAAGCCTACGATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPQRAEAARPIYVPHVSRNDSKV*KAYDAE Trigger: TTCTGCATCGTAGGCTTTCCAGACCTTGCTGTCATT...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 90 bp | CCCAGGCGGGCCAGCTTGCGGCCCGTGCAGCGCCGGGGGTCGCAGTaGCCCAACTCCCACATGGCCAGCGTGCAGGGCAGCGCCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRASLRPVQRRGSQ*PNSHMASVQGSAAG Trigger: CCCGGCGGCGCTGCCCTGCACGCTGGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGCCCGCCTGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS GCA 90 bp | GGCGCAGGCAGCGCACCAGCCCCAGGCGGGCCAGCTTGCGGCCCGTaGAGCGCCGGGGGTCGCAGTGGCCCAACTCCCACATGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAGSAPAPGGPACGP*SAGGRSGPTPTWPA Trigger: CGCTGGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGCCCGCCTGGGGCTGGTGCGCTGCCTGCGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS GCA 90 bp | TGTGGCCCAGGCGCAGGCAGCGCACCAGCCCCAGGCGGGCCAGCTTaGGGCCCGTGCAGCGCCGGGGGTCGCAGTGGCCCAACTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CGPGAGSAPAPGGPA*GPCSAGGRSGPTPT Trigger: TGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGCCCGCCTGGGGCTGGTGCGCTGCCTGCGCCTGGGCCACA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 90 bp | GCGTACTGCTTGCCCACGGGGCTCAGCACCAGACCGCCGAATCTGTaGCCCAGGCGCAGGCAGCGCACCAGCCCCAGGCGGGCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AYCLPTGLSTRPPNL*PRRRQRTSPRRASL Trigger: CAAGCTGGCCCGCCTGGGGCTGGTGCGCTGCCTGCGCCTGGGCCACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCAGGGGACGCGTACTGCTaGCCCACGGGGCTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: LLLAPPRSAPGPGSSDASGDAYC*PTGLST Trigger: GGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCC...TGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS GCA 90 bp | CAGACTGCGCCACCAGCTGTCTGTCTGCGGGGGACGCGTACTGCTTaGCCACGGGGCTCAGCACCAGACCGCCGAATCTGTGGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTAPPAVCLRGTRTA*PRGSAPDRRICGPG Trigger: GCCTGGGCCACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGGCGCAGTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGGGGACGCGTACTGCTaGCCCACGGGGCTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPGDAYC*PTGLST Trigger: GGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCC...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | ACCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTGGCGGTTCAGGTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: TSSGLPQAAYLSRSWRFRSWGLS*ALAKNS Trigger: GGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGA...CCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGGGCCTGCAGCTTCATTaGCGAGAGCGCCGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPGLQLH*RERRGR Trigger: CCTGCCTCGGCGCTCTCGCAAATGAAGCTGCAGGCC...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 90 bp | CTTCCACGCAGGAAAGTCTGTAGGGCCGGCCATAGTTCACGGGGTTaGCGGCCACCAGGTAGGGCAACAGGCGCAAGTGGCTCCCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LPRRKVCRAGHSSRG*RPPGRATGASGSLA Trigger: TGCGAGGGAGCCACTTGCGCCTGTTGCCCTACCTGGTGGCCGCCAACCCCGTGAACTATGGCCGGCCCTACAGACTTTCCTGCGTGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCAAGGTCCAAGAAGCCCTaGCCCCATTTAAACTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLAPPRSAPGPGSSDASRSKKP*PHLNFR Trigger: GCGGAAGTTTAAATGGGGCAAGGGCTTCTTGGACCT...TGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS CCA 90 bp | AGCACCTCCTCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTaGCGGTTCAGGTCCAAGAAGCCCTTGCCCCATTTAAACTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: STSSGLPQAAYLSRS*RFRSKKPLPHLNFR Trigger: GCGGAAGTTTAAATGGGGCAAGGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | CAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLCWKCGENPDSSVLPAASWGLS*ALAKNS Trigger: GGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGA...GGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 90 bp | AATCCACATCGAAGGGATCGATCTCCTCCTCCTGGGGGCTCTCCTTaGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NPHRRDRSPPPGGSP*HWPRTPAPPAAPPP Trigger: CGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGTGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | GCTGGCTCCTCCGCGCTCGGCGCCAGGCCCTGGGTCCTCAGACGCATCACTGTCTCTCTCTGCCGTTTCTaGATTCCTTTCCAAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSSALGARPWVLRRITVSLCRF*IPFQTS Trigger: TGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGA...GACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | CCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTCCGCAGGCCGCGTACTaGTCCAGGAGCTGGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQRAEAARPIYVPHVSRFPQAAY*SRSWRF Trigger: GAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGG...AAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | GTCTCTCTGCCGTTTCTTGATTCCTTTCCAAACCTCAGCCGGGGCCCTGGCCTCGGGCTCTCCTTGGCATaGGCCAAGAACTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLPFLDSFPNLSRGPGLGLSLA*AKNSCS Trigger: GGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCC...GAGGCCAGGGCCCCGGCTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566296.1 |
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| CDS-3UTR CAA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGAGGGCTCTCCTTGGCATaGGCCAAGAACTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPQRAEAARPIYVPHVSRGLSLA*AKNSCS Trigger: GGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCC...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | AGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTGCCAGCAGCCGTCTCTCTGCCGTTTCTaGATTCCTTTCCAAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCAGSVGRTRTAQSCQQPSLCRF*IPFQTS Trigger: TGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGA...CGGCTGCTGGCAGGACTGAGCTGTCCGGGTTCTCCCCACACTTCCAGCACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | CAGCCGCAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGAAGGTCCAAGAAGCCCTaGCCCCATTTAAACTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QPQRAEAARPIYVPHVSRRSKKP*PHLNFR Trigger: GCGGAAGTTTAAATGGGGCAAGGGCTTCTTGGACCT...TCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTGCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS-3UTR CAA 90 bp | CAAAGAGCCGAGGCTGCCAGGCCCATTTATGTCCCTCATGTCTCTAGATTTTCTCTGGCCACAGGCCTGTaGGGGTTTCCAAACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRAEAARPIYVPHVSRFSLATGL*GFPNSL Trigger: GAGAGAGTTTGGAAACCCCAACAGGCCTGTGGCCAG...AGAAAATCTAGAGACATGAGGGACATAAATGGGCCTGGCAGCCTCGGCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 72 bp | TGCAGCGCCGGGGGTCGCAGTGGCCCAACTCCCACATaGCCAGCGTGCAGGGCAGCGCCGCCGGGCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSAGGRSGPTPT*PACRAAPPGPG Trigger: GCCCGGGCCCGGCGGCGCTGCCCTGCACGCTGGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS GCA 72 bp | AGCGCACCAGCCCCAGGCGGGCCAGCTTGCGGCCCGTaGAGCGCCGGGGGTCGCAGTGGCCCAACTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SAPAPGGPACGP*SAGGRSGPTPT Trigger: TGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGCCCGCCTGGGGCTGGTGCGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 72 bp | GCCAGCTTGCGGCCCGTGCAGCGCCGGGGGTCGCAGTaGCCCAACTCCCACATGGCCAGCGTGCAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLRPVQRRGSQ*PNSHMASVQGS Trigger: GCTGCCCTGCACGCTGGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 72 bp | TTGCCCACGGGGCTCAGCACCAGACCGCCGAATCTGTaGCCCAGGCGCAGGCAGCGCACCAGCCCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPTGLSTRPPNL*PRRRQRTSPRR Trigger: CCGCCTGGGGCTGGTGCGCTGCCTGCGCCTGGGCCACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CAA 90 bp | CCAGACTGCGCCACCAGCTGTCTGTCTGCGGGGGACGCGTACTGCTaGCCCACGGGGCTCAGCACCAGACCGCCGAATCTGTGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PDCATSCLSAGDAYC*PTGLSTRPPNLWPR Trigger: CCTGGGCCACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGGCGCAGTCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS GCA 72 bp | TGCGCCACCAGCTGTCTGTCTGCGGGGGACGCGTACTaGTTGCCCACGGGGCTCAGCACCAGACCGCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CATSCLSAGDAY*LPTGLSTRPPN Trigger: ATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGGCGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS CAA 72 bp | GCCACCAGCTGTCTGTCTGCGGGGGACGCGTACTGCTaGCCCACGGGGCTCAGCACCAGACCGCCGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATSCLSAGDAYC*PTGLSTRPPNL Trigger: CAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS GCA 72 bp | CCACCAGCTGTCTGTCTGCGGGGGACGCGTACTGCTTaGCCACGGGGCTCAGCACCAGACCGCCGAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPAVCLRGTRTA*PRGSAPDRRIC Trigger: ACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS CCA 72 bp | AGGAAAGTCTGTAGGGCCGGCCATAGTTCACGGGGTTaGCGGCCACCAGGTAGGGCAACAGGCGCAAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RKVCRAGHSSRG*RPPGRATGASG Trigger: GCCACTTGCGCCTGTTGCCCTACCTGGTGGCCGCCAACCCCGTGAACTATGGCCGGCCCTACAGACTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS CCA 72 bp | TCCGGGCTGCCGCAGGCCGCGTACTTGTCCAGGAGCTaGCGGTTCAGGTCCAAGAAGCCCTTGCCCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: SGLPQAAYLSRS*RFRSKKPLPHL Trigger: TAAATGGGGCAAGGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007390.3 ENST00000566296.1 |
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| CDS CAA 90 bp | ACATCGAAGGGATCGATCTCCTCCTCCTGGGGGCTCTCCTTGGCATaGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSKGSISSSWGLSLA*AKNSCSACSTSSGL Trigger: CAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CAA 72 bp | TCGAAGGGATCGATCTCCTCCTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SKGSISSSWGLS*ALAKNSCSACS Trigger: GCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CAA 90 bp | GAATCCACATCGAAGGGATCGATCTCCTCCTCCTGGGGGCTCTCCTaGGCATTGGCCAAGAACTCCTGCTCCGCCTGCAGCACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ESTSKGSISSSWGLS*ALAKNSCSACSTSS Trigger: GGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGTGGATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 72 bp | TGTCCGAGGGCAGCCGGGTGCTGGCCACAGGCCTGTTaGGGTTTCCAAACTCTCTCCCTGAATCCACATCGA | + |
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Preference number: 6 (lower is better) Translates to: CPRAAGCWPQAC*GFQTLSLNPHR Trigger: TCGATGTGGATTCAGGGAGAGAGTTTGGAAACCCCAACAGGCCTGTGGCCAGCACCCGGCTGCCCTCGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS CCA 72 bp | CCTGAATCCACATCGAAGGGATCGATCTCCTCCTCCTaGGGGCTCTCCTTGGCATTGGCCAAGAACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PESTSKGSISSS*GLSLALAKNSC Trigger: GCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGTGGATTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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| CDS TCA 72 bp | GGCCACAGGCCTGTTGGGGTTTCCAAACTCTCTCCCTaGATCCACATCGAAGGGATCGATCTCCTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GHRPVGVSKLSP*IHIEGIDLLLL Trigger: CAGGAGGAGGAGATCGATCCCTTCGATGTGGATTCAGGGAGAGAGTTTGGAAACCCCAACAGGCCTGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007390.3 |
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