RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPYL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000187189

Ensembl transcript IDs: ENST00000420283.3

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAGGAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTaGTTTGGGCTCTGTCACATATTACTGCCCATCCTGGTGGTAGGG +
Preference number: 1 (lower is better)
Translates to: LGVRKTKLEGTAFQP*FGLCHILLPILVVG
Trigger: CCCTACCACCAGGATGGGCAGTAATATGTGACAGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 90 bp GCACATCCCCTTATCCCCTACAAGGAGGCTGGAGATCTTCCACAATaGAGGCTGCAGCCTGCTTCTTCATTTGTTAGGAGCAGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: AHPLIPYKEAGDLPQ*RLQPASSFVRSREG
Trigger: TCCTTCCCTGCTCCTAACAAATGAAGAAGCAGGCTGCAGCCTGCATTGTGGAAGATCTCCAGCCTCCTTGTAGGGGATAAGGGGATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 90 bp CTAAGCCTTGACGGCATCACTGTCCCACCTACTGGAACTTGTCCGTaGAAATCCACACAGATGCTGCACATCCCCTTATCCCCTACAAGG +
Preference number: 1 (lower is better)
Translates to: LSLDGITVPPTGTCP*KSTQMLHIPLSPTR
Trigger: CCTTGTAGGGGATAAGGGGATGTGCAGCATCTGTGTGGATTTTCACGGACAAGTTCCAGTAGGTGGGACAGTGATGCCGTCAAGGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 90 bp CCCTTATCCCCTACAAGGAGGCTGGAGATCTTCCACAATGCAGGCTaGAGCCTGCTTCTTCATTTGTTAGGAGCAGGGAAGGAAATGCAG +
Preference number: 1 (lower is better)
Translates to: PLSPTRRLEIFHNAG*SLLLHLLGAGKEMQ
Trigger: CTGCATTTCCTTCCCTGCTCCTAACAAATGAAGAAGCAGGCTGCAGCCTGCATTGTGGAAGATCTCCAGCCTCCTTGTAGGGGATAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 90 bp TGGCACAAGCCCAGGAAGGCAGCTGGGATCCAGTTGGTGGTAGTCTaGAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTT +
Preference number: 1 (lower is better)
Translates to: WHKPRKAAGIQLVVV*NVQFGLMAGLRYQF
Trigger: AAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTCCAGACTACCACCAACTGGATCCCAGCTGCCTTCCTGGGCTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 90 bp ATGCAGAAGCTGAGAAATGAGGGCCAAGAAAGCCAGGCAGTAGGATaGAGACCCAAGGGACATCAGGGCAGAAACAAAATAGTACAAAGG +
Preference number: 1 (lower is better)
Translates to: MQKLRNEGQESQAVG*RPKGHQGRNKIVQR
Trigger: CCTTTGTACTATTTTGTTTCTGCCCTGATGTCCCTTGGGTCTCCATCCTACTGCCTGGCTTTCTTGGCCCTCATTTCTCAGCTTCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 90 bp GATGGTGGATGGTCTTTATCACCACACATGATCATAACTAAGCCTTaGCGGCATCACTGTCCCACCTACTGGAACTTGTCCGTGAAAATC +
Preference number: 1 (lower is better)
Translates to: DGGWSLSPHMIITKP*RHHCPTYWNLSVKI
Trigger: GATTTTCACGGACAAGTTCCAGTAGGTGGGACAGTGATGCCGTCAAGGCTTAGTTATGATCATGTGTGGTGATAAAGACCATCCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 90 bp CAGAGGCATAACAAGTCTCACATTCCAGAAATATCTCTTCCTCAATaGCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: QRHNKSHIPEISLPQ*PNSGNFCHVQSGCR
Trigger: CCTGCACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGATATTTCTGGAATGTGAGACTTGTTATGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 90 bp TGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTaGAGTGGTAATACCCAAATAGCTTACCATAAGTACATGGGTATC +
Preference number: 1 (lower is better)
Translates to: CPIWVDGRVKISVLS*SGNTQIAYHKYMGI
Trigger: GATACCCATGTACTTATGGTAAGCTATTTGGGTATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 90 bp TGTGAAAATGTATCAAGATTCTTTGTGGTACAGAACCACTTAAATTaGGAGAAGAGCATGGTCACAGATAGGGTCCAAGCCATGCAAAGA +
Preference number: 1 (lower is better)
Translates to: CENVSRFFVVQNHLN*EKSMVTDRVQAMQR
Trigger: TCTTTGCATGGCTTGGACCCTATCTGTGACCATGCTCTTCTCCCAATTTAAGTGGTTCTGTACCACAAAGAATCTTGATACATTTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGGGTGGTAGGGGGTGTTaGTGTGAGCTCCCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVGGRGC*CELPGS
Trigger: GCTCCCAGGGAGCTCACAGCAACACCCCCTACCACC...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp TCTATTACCTCAGTCACGCCTAGCAGTCACCCATCAGCCACCAGCTaGTTCTATCAGATAACCAGTAGGGTGGATGGCACAAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SITSVTPSSHPSATS*FYQITSRVDGTSPG
Trigger: TCCTGGGCTTGTGCCATCCACCCTACTGGTTATCTGATAGAACAAGCTGGTGGCTGATGGGTGACTGCTAGGCGTGACTGAGGTAATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTACCAGCAGCTGGTCATaGCGTAGAGTAACCAAAGGT +
Preference number: 2 (lower is better)
Translates to: ESERLSWKGLRSSLALGSTSSWS*RRVTKG
Trigger: ACCTTTGGTTACTCTACGTCATGACCAGCTGCTGGT...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp AGTGAGGCTAAGTTTTGGTTGCCTTTGCTCACATCACAAAGGCCTTaGCCTTTGACCCGTCCTGAACCCATCACTGTGAGGCCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SEAKFWLPLLTSQRP*PLTRPEPITVRPFS
Trigger: AGAGAAGGGCCTCACAGTGATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGCAGAAGCTGAGAAATaGGGGCCAAGAAAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSAEAEK*GPRKPG
Trigger: GCCTGGCTTTCTTGGCCCTCATTTCTCAGCTTCTGC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp GCTAAGTTTTGGTTGCCTTTGCTCACATCACAAAGGCCTTTGCCTTaGACCCGTCCTGAACCCATCACTGTGAGGCCCTTCTCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: AKFWLPLLTSQRPLP*TRPEPITVRPFSLF
Trigger: AAAGAGAGAGAAGGGCCTCACAGTGATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGGAGATCTTCCACAATaGAGGCTGCAGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSGDLPQ*RLQPAS
Trigger: AGAAGCAGGCTGCAGCCTGCATTGTGGAAGATCTCC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCATCAGAAAGACTAAGCTaGAAGGGACTGCGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSSERLS*KGLRSS
Trigger: GCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGA...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTCTTGCAACCGATTACTaGAGATTTAGAACCAAAGGA +
Preference number: 2 (lower is better)
Translates to: ESERLSWKGLRSSLALGSLATDY*RFRTKG
Trigger: TCCTTTGGTTCTAAATCTTCAGTAATCGGTTGCAAG...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACAATGCAGAAAAGCATaGAGGCCCAGAGGAAGAATG +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSQCRKA*RPRGRM
Trigger: CATTCTTCCTCTGGGCCTTCATGCTTTTCTGCATTG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAAGATGGAAGACTGCATaGTGTTGGCCAAGCATAGGT +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSRWKTA*CWPSIG
Trigger: ACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACTGGAATGTCCAATTTaGGTTGATGGCCGGGTTAAG +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSLECPI*VDGRVK
Trigger: CTTAACCCGGCCATCAACCCAAATTGGACATTCCAG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp TTCAGAGTGGGTGCAGGCGGGGAAAAGAGGAAATGCCTAAAGAAGTaGCTCACATTAAGGATGGTTTGTTGGCTAGGAGTCAGAAAGACT +
Preference number: 2 (lower is better)
Translates to: FRVGAGGEKRKCLKK*LTLRMVCWLGVRKT
Trigger: AGTCTTTCTGACTCCTAGCCAACAAACCATCCTTAATGTGAGCAACTTCTTTAGGCATTTCCTCTTTTCCCCGCCTGCACCCACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp TTTCCATCTTTAGAAAAGTGGAGTGAGGCTAAGTTTTGGTTGCCTTaGCTCACATCACAAAGGCCTTTGCCTTTGACCCGTCCTGAACCC +
Preference number: 2 (lower is better)
Translates to: FPSLEKWSEAKFWLP*LTSQRPLPLTRPEP
Trigger: GGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCTCACTCCACTTTTCTAAAGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAGGCCCAGAGGAAGAATaGCACAGGCAGGTAAGCCAA +
Preference number: 2 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIGPEEE*HRQVSQ
Trigger: TTGGCTTACCTGCCTGTGCCATTCTTCCTCTGGGCC...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACTTACCATAAGTACATaGGTATCAGGACACAGCCAG +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSLTIST*VSGHSQ
Trigger: CTGGCTGTGTCCTGATACCCATGTACTTATGGTAAG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACAGTTGGTGGTAGTCTaGAATGTCCAATTTGGGTTG +
Preference number: 2 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSQLVVV*NVQFGL
Trigger: CAACCCAAATTGGACATTCCAGACTACCACCAACTG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGATTGTCATGTTCAGAGTaGGTGCAGGCGGGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRLSCSE*VQAGKR
Trigger: TCTTTTCCCCGCCTGCACCCACTCTGAACATGACAA...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTAAGACTGCATGCTGTTaGCCAAGCATAGGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSKTACC*PSIGPR
Trigger: TCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTT...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGTTAAGGATGGTTTGTTaGCTAGGAGTCAGAAAGACT +
Preference number: 2 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVLRMVC*LGVRKT
Trigger: AGTCTTTCTGACTCCTAGCCAACAAACCATCCTTAA...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGCCCCTACAAGGAGGCTaGAGATCTTCCACAATGCAG +
Preference number: 2 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMPLQGG*RSSTMQ
Trigger: CTGCATTGTGGAAGATCTCCAGCCTCCTTGTAGGGG...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGATCATAACTAAGCCTTaGCGGCATCACTGTCCCACC +
Preference number: 2 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMIITKP*RHHCPT
Trigger: GGTGGGACAGTGATGCCGTCAAGGCTTAGTTATGAT...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCCATGTTCAGAGTGGGTaGAGGCGGGGAAAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVHVQSG*RRGKEE
Trigger: TTCCTCTTTTCCCCGCCTGCACCCACTCTGAACATG...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAAGGCTAAGTTTTGGTTaGCTTTGCTCACATCACAAA +
Preference number: 2 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKRLSFG*LCSHHK
Trigger: TTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCT...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCACTGCGTTCCAGCCTTaGTTTGGGCTCTGTCACATA +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVTAFQP*FGLCHI
Trigger: TATGTGACAGAGCCCAAAGCAAGGCTGGAACGCAGT...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGATTGGGAGAAGAGCATaGTCACAGATAGGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMIGRRA*SQIGSK
Trigger: CTTGGACCCTATCTGTGACCATGCTCTTCTCCCAAT...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 90 bp CTGGAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTaGTCTTGCAGTGGTAATACCCAAATAGCTTACCATAAGTACATG +
Preference number: 2 (lower is better)
Translates to: LECPIWVDGRVKISV*SCSGNTQIAYHKYM
Trigger: CATGTACTTATGGTAAGCTATTTGGGTATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCCAAAGGGGAAAAGGGTaGTGGTGGATGGTCTTTATC +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVQRGKG*WWMVFI
Trigger: GATAAAGACCATCCACCATCACCCTTTTCCCCTTTG...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGATAGGGTCCAAGCCATaGAAAGAAAGGCAGTATGGT +
Preference number: 2 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLIGSKP*KERQYG
Trigger: ACCATACTGCCTTTCTTTGCATGGCTTGGACCCTAT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAAGCCAGCATAAAGTATaGAGCCCAATCAGTTATTTG +
Preference number: 2 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVISQHKV*SPISYL
Trigger: CAAATAACTGATTGGGCTTCATACTTTATGCTGGCT...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGATATCTCTTCCTCAATaGCCCAACTCTGGCAACTTT +
Preference number: 2 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMISLPQ*PNSGNF
Trigger: AAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGATAT...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCAAGGGTGATGGTGGATaGTCTTTATCACCACACATG +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVKGDGG*SLSPHM
Trigger: CATGTGTGGTGATAAAGACCATCCACCATCACCCTT...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR TCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCCATAACCTTTCTCTCTaGACACAATCAGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVHNLSL*TQSGKE
Trigger: CTCTTTCCCTGATTGTGTTCAGAGAGAAAGGTTATG...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR GCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCGGGGAAAAGAGGAAATaGCTAAAGAAGTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVGEKRK*LKKLLT
Trigger: TGTGAGCAACTTCTTTAGGCATTTCCTCTTTTCCCC...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 72 bp TCCCCTCCCACCCCTGATCCTGCAGGTTCTTTCCTGTaGGCCTTTCCAAACCCACGCCACAGCAGGCTCATT +
Preference number: 3 (lower is better)
Translates to: SPPTPDPAGSFL*AFPNPRHSRLI
Trigger: AATGAGCCTGCTGTGGCGTGGGTTTGGAAAGGCTCACAGGAAAGAACCTGCAGGATCAGGGGTGGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 72 bp GCTCACATCACAAAGGCCTTTGCCTTTGACCCGTCCTaGACCCATCACTGTGAGGCCCTTCTCTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: AHITKAFAFDPS*THHCEALLSLS
Trigger: GGAAAGAGAGAGAAGGGCCTCACAGTGATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 72 bp GACGGCATCACTGTCCCACCTACTGGAACTTGTCCGTaGAAATCCACACAGATGCTGCACATCCCCTTATCC +
Preference number: 3 (lower is better)
Translates to: DGITVPPTGTCP*KSTQMLHIPLS
Trigger: GGATAAGGGGATGTGCAGCATCTGTGTGGATTTTCACGGACAAGTTCCAGTAGGTGGGACAGTGATGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 72 bp CCTACAAGGAGGCTGGAGATCTTCCACAATGCAGGCTaGAGCCTGCTTCTTCATTTGTTAGGAGCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: PTRRLEIFHNAG*SLLLHLLGAGK
Trigger: CTTCCCTGCTCCTAACAAATGAAGAAGCAGGCTGCAGCCTGCATTGTGGAAGATCTCCAGCCTCCTTGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 72 bp AGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTaGTTTGGGCTCTGTCACATATTACTGCCCATCCTG +
Preference number: 3 (lower is better)
Translates to: RKTKLEGTAFQP*FGLCHILLPIL
Trigger: CAGGATGGGCAGTAATATGTGACAGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAACATCACAAAGGCCTTaGCCTTTGACCCGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKTSQRP*PLTRPE
Trigger: TTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGT...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAGAAGACTGCATGCTGTaGGCCAAGCATAGGTCCAAG +
Preference number: 3 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKREDCML*AKHRSK
Trigger: CTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTC...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR TCA 72 bp TGGTCTTTATCACCACACATGATCATAACTAAGCCTTaGCGGCATCACTGTCCCACCTACTGGAACTTGTCC +
Preference number: 3 (lower is better)
Translates to: WSLSPHMIITKP*RHHCPTYWNLS
Trigger: GGACAAGTTCCAGTAGGTGGGACAGTGATGCCGTCAAGGCTTAGTTATGATCATGTGTGGTGATAAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGGTAAGCCAACAATCTaGCAACCGATTACTGAAGAT +
Preference number: 3 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSGKPTI*QPITED
Trigger: ATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGACGTTCCAGCCTTGCTTaGGGCTCTGTCACATATTAC +
Preference number: 3 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRRSSLA*GSVTYY
Trigger: GTAATATGTGACAGAGCCCAAAGCAAGGCTGGAACG...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGGACTGCGTTCCAGCCTaGCTTTGGGCTCTGTCACAT +
Preference number: 3 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLDCVPA*LWALSH
Trigger: ATGTGACAGAGCCCAAAGCAAGGCTGGAACGCAGTC...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAATTAAGGATGGTTTGTaGGCTAGGAGTCAGAAAGAC +
Preference number: 3 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSIKDGL*ARSQKD
Trigger: GTCTTTCTGACTCCTAGCCAACAAACCATCCTTAAT...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGCAAAGGCCTTTGCCTTaGACCCGTCCTGAACCCATC +
Preference number: 3 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMQRPLP*TRPEPI
Trigger: GATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTG...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAAAGTTTTGGTTGCCTTaGCTCACATCACAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKKFWLP*LTSQRP
Trigger: AGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTT...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR GCA 72 bp ATGTTCAGAGTGGGTGCAGGCGGGGAAAAGAGGAAATaGCTAAAGAAGTTGCTCACATTAAGGATGGTTTGT +
Preference number: 3 (lower is better)
Translates to: MFRVGAGGEKRK*LKKLLTLRMVC
Trigger: ACAAACCATCCTTAATGTGAGCAACTTCTTTAGGCATTTCCTCTTTTCCCCGCCTGCACCCACTCTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGACCATCAGCCACCAGCTaGTTCTATCAGATAACCAGT +
Preference number: 3 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRPSATS*FYQITS
Trigger: ACTGGTTATCTGATAGAACAAGCTGGTGGCTGATGG...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 72 bp GTATCAAGATTCTTTGTGGTACAGAACCACTTAAATTaGGAGAAGAGCATGGTCACAGATAGGGTCCAAGCC +
Preference number: 3 (lower is better)
Translates to: VSRFFVVQNHLN*EKSMVTDRVQA
Trigger: GGCTTGGACCCTATCTGTGACCATGCTCTTCTCCCAATTTAAGTGGTTCTGTACCACAAAGAATCTTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 72 bp TGCCTAAAGAAGTTGCTCACATTAAGGATGGTTTGTTaGCTAGGAGTCAGAAAGACTAAGCTGGAAGGGACT +
Preference number: 3 (lower is better)
Translates to: CLKKLLTLRMVC*LGVRKTKLEGT
Trigger: AGTCCCTTCCAGCTTAGTCTTTCTGACTCCTAGCCAACAAACCATCCTTAATGTGAGCAACTTCTTTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGCCCACCTACTGGAACTaGTCCGTGAAAATCCACACA +
Preference number: 3 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMPTYWN*SVKIHT
Trigger: TGTGTGGATTTTCACGGACAAGTTCCAGTAGGTGGG...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CCA 72 bp TTTCCATCTTTAGAAAAGTGGAGTGAGGCTAAGTTTTaGTTGCCTTTGCTCACATCACAAAGGCCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: FPSLEKWSEAKF*LPLLTSQRPLP
Trigger: AGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCTCACTCCACTTTTCTAAAGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAAATGTCCAATTTGGGTaGATGGCCGGGTTAAGATAT +
Preference number: 3 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRNVQFG*MAGLRY
Trigger: ATATCTTAACCCGGCCATCAACCCAAATTGGACATT...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAAAATGCCTAAAGAAGTaGCTCACATTAAGGATGGTT +
Preference number: 3 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKKCLKK*LTLRMV
Trigger: AACCATCCTTAATGTGAGCAACTTCTTTAGGCATTT...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR-3UTR CAA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCCCTGCTTTGCCAGTTTaGTTTTCTGTTAATAAGCTA +
Preference number: 3 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVPALPV*FSVNKL
Trigger: TAGCTTATTAACAGAAAACAAAACTGGCAAAGCAGG...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACCCGGCTTTGGTCGCTaGACCGCCGCGACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSPGFGR*TAATPG
Trigger: GCCGGGAGTCGCGGCGGTGCAGCGACCAAAGCCGGG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGGCCAGGCCGCCGGTTTaGGCGAGAGGGAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKARPPV*ARGSLL
Trigger: CAACAAGCTCCCTCTCGCCCAAACCGGCGGCCTGGC...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTCTCCATCGCCGCCCCTaGTTCTCCCTCCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSLHRRP*FSLLFH
Trigger: GTGGAAAAGGAGGGAGAAGCAGGGGCGGCGATGGAG...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTGGGTCTTGGCCTCGGTaGCAGCGGATTGGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSGSWPR*QRIGVE
Trigger: TTCCACTCCAATCCGCTGGCACCGAGGCCAAGACCC...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGGATCTCCTGAGGCATaGTCGGGAGCAGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSGSPEA*SGAARP
Trigger: CGGCCTGGCTGCTCCCGACCATGCCTCAGGAGATCC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGTCTGGCGCTCTCCACTaGCTGCCTTGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVSGALH*LPWWAS
Trigger: CGAGGCCCACCAAGGCAGCCAGTGGAGAGCGCCAGA...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGAGCCAGACTGGAACCTaGAGGATCTGGCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKSQTGT*RIWRSP
Trigger: TGGAGAGCGCCAGATCCTTCAGGTTCCAGTCTGGCT...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp TGGTTGCCTTTGCTCACATCACAAAGGCCTTTGCCTTaGACCCGTCCTGAACCCATCACTGTGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WLPLLTSQRPLP*TRPEPITVRPF
Trigger: GAAGGGCCTCACAGTGATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGGCCTTTGACCCGTCCTaGACCCATCACTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVAFDPS*THHCEA
Trigger: GGCCTCACAGTGATGGGTTCAGGACGGGTCAAAGGC...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAACGAGAGGGAGCTTGTTaGCCCCATCCAGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKREGAC*PHPGRS
Trigger: TGAGCGGCCTGGATGGGGGCAACAAGCTCCCTCTCG...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGGGCCCAGAGGAAGAATaGCACAGGCAGGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKGPEEE*HRQVSQ
Trigger: TTGGCTTACCTGCCTGTGCCATTCTTCCTCTGGGCC...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp TCAGTCACGCCTAGCAGTCACCCATCAGCCACCAGCTaGTTCTATCAGATAACCAGTAGGGTGGATGGCACA +
Preference number: 4 (lower is better)
Translates to: SVTPSSHPSATS*FYQITSRVDGT
Trigger: TGTGCCATCCACCCTACTGGTTATCTGATAGAACAAGCTGGTGGCTGATGGGTGACTGCTAGGCGTGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGCGGTTTCTGTGGATATaGGCCTGGGGGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVRFLWI*AWGSWP
Trigger: AGGCCAAGACCCCCAGGCTCATATCCACAGAAACCG...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGAAAGGCCTTTGCCTTTaGCCCGTCCTGAACCCATCA +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKKGLCL*PVLNPS
Trigger: TGATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTT...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTATCATAACTAAGCCTTaGCGGCATCACTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSIITKP*RHHCPT
Trigger: GGTGGGACAGTGATGCCGTCAAGGCTTAGTTATGAT...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTCAACGGTCTCCAGGCTaGCCCCACCTGTGTTCGCCA +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKIQRSPG*PHLCSP
Trigger: TGGCGAACACAGGTGGGGGCAGCCTGGAGACCGTTG...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCCTCCTGCCCGGCTTTaGTCGCTGCACCGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLPPARL*SLHRRD
Trigger: GTCGCGGCGGTGCAGCGACCAAAGCCGGGCAGGAGG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGCTCCACTGGCTGCCTTaGTGGGCCTCGAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVLHWLP*WASNSS
Trigger: AGAGGAATTCGAGGCCCACCAAGGCAGCCAGTGGAG...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGCCCAGGAAGGCAGCTaGGATCCAGTTGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSAQEGS*DPVGGS
Trigger: ACTACCACCAACTGGATCCCAGCTGCCTTCCTGGGC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGACCAGCAGCTGGTCATaGCGTAGAGTAACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKTSSWS*RRVTKG
Trigger: ACCTTTGGTTACTCTACGTCATGACCAGCTGCTGGT...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAACTCGGCGGCAGAGGCTaGTTCCAGACCTTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKLGGRG*FQTFRR
Trigger: TCTACGAAAGGTCTGGAAGCAGCCTCTGCCGCCGAG...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAAGCCATTTTTCTGGCTaGTGTCAGCAGCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKSHFSG*CQQPRR
Trigger: CCGCCGAGGCTGCTGACAGCAGCCAGAAAAATGGCT...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGACAACTCTTGATCGATaGCCTCCAGTGAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKTTLDR*PPVSPC
Trigger: GCATGGACTCACTGGAGGCCATCGATCAAGAGTTGT...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGGGTGACAGCTGGGGGTaGTTTCGAAAGGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVGDSWG*FRKAVT
Trigger: GGTTACTGCCTTTCGAAACCACCCCCAGCTGTCACC...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGCAAAGGGGAAAAGGGTaGTGGTGGATGGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKQRGKG*WWMVFI
Trigger: GATAAAGACCATCCACCATCACCCTTTTCCCCTTTG...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGGCTTCTAGAGCCTTCTaGCCAGCAGGGCCACGGGGC +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMASRAF*PAGPRG
Trigger: GCCCCGTGGCCCTGCTGGGCAGAAGGCTCTAGAAGC...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGCGCTCTCCACTGGCTaGCTTGGTGGGCCTCGAATT +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSALSTG*LGGPRI
Trigger: AATTCGAGGCCCACCAAGGCAGCCAGTGGAGAGCGC...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGTTCCACAATGCAGGCTaGAGCCTGCTTCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKFHNAG*SLLLHL
Trigger: CAAATGAAGAAGCAGGCTGCAGCCTGCATTGTGGAA...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTTCTTCACGGAGCCCTTaGCACTGGTCTCGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSSSRSP*HWSRSG
Trigger: TCCGGACCGAGACCAGTGCCAAGGGCTCCGTGAAGA...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGCTGGAATGTCCAATTTaGGTTGATGGCCGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKLECPI*VDGRVK
Trigger: CTTAACCCGGCCATCAACCCAAATTGGACATTCCAG...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGCACTGTCCCACCTACTaGAACTTGTCCGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKHCPTY*NLSVKI
Trigger: GATTTTCACGGACAAGTTCCAGTAGGTGGGACAGTG...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTAAGGGTGATGGTGGATaGTCTTTATCACCACACATG +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSKGDGG*SLSPHM
Trigger: CATGTGTGGTGATAAAGACCATCCACCATCACCCTT...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCTCGGTCCGGATCTCCTaGGGCATGGTCGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVSVRIS*GMVGSS
Trigger: GCTGCTCCCGACCATGCCTCAGGAGATCCGGACCGA...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGACGGGGCTCTCCAAGCTaGCAGCCATTTTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRRGSPS*QPFFWL
Trigger: CAGCCAGAAAAATGGCTGTCAGCTTGGAGAGCCCCG...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAGCCACTGATCATAGGTaGCAGCTGGGGGTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRATDHR*QLGVVS
Trigger: CGAAACCACCCCCAGCTGTCACCTATGATCAGTGGC...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTGCAGAAGCTGAGAAATaGGGGCCAAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKIAEAEK*GPRKPG
Trigger: GCCTGGCTTTCTTGGCCCTCATTTCTCAGCTTCTGC...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGGGTGGTAGGGGGTGTTaGTGTGAGCTCCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLGGRGC*CELPGS
Trigger: GCTCCCAGGGAGCTCACAGCAACACCCCCTACCACC...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGCGGAGCCCTTGGCACTaGTCTCGGTCCGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMRSPWH*SRSGSP
Trigger: AGGAGATCCGGACCGAGACCAGTGCCAAGGGCTCCG...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGAAGGCCCTGTCAGCCTaGGCATTTACGTTTGACAAC +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVKALSA*AFTFDN
Trigger: GTTGTCAAACGTAAATGCCCAGGCTGACAGGGCCTT...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTCAGAACCACTTAAATTaGGAGAAGAGCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSQNHLN*EKSMVT
Trigger: TGTGACCATGCTCTTCTCCCAATTTAAGTGGTTCTG...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTAGTGAGGCTAAGTTTTaGTTGCCTTTGCTCACATCA +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSSEAKF*LPLLTS
Trigger: TGATGTGAGCAAAGGCAACCAAAACTTAGCCTCACT...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTAGCCAGGCAGTAGGATaGAGACCCAAGGGACATCAG +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKISQAVG*RPKGHQ
Trigger: CTGATGTCCCTTGGGTCTCCATCCTACTGCCTGGCT...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAATCGATGGCCTCCAGTaGGTCCATGCAGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSIDGLQ*VHAVID
Trigger: ATCAATAACTGCATGGACTCACTGGAGGCCATCGAT...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTAGCCAGCATAAAGTATaGAGCCCAATCAGTTATTTG +
Preference number: 4 (lower is better)
Translates to: ESERLSWKGLRSSLALGSSQHKV*SPISYL
Trigger: CAAATAACTGATTGGGCTTCATACTTTATGCTGGCT...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTCTGAACCCATCACTGTaGGGCCCTTCTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKILNPSL*GPSLSF
Trigger: GAAAGAGAGAGAAGGGCCTCACAGTGATGGGTTCAG...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCGGTGGAGCATCCTCCTaGCCGGCTTTGGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVGGASS*PALVAA
Trigger: TGCAGCGACCAAAGCCGGGCAGGAGGATGCTCCACC...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGAGATGGAAGACTGCATaGTGTTGGCCAAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVRWKTA*CWPSIG
Trigger: ACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGCTTCTGCGCTGCATGTaGAGCCTTCGCATGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMLLRCM*SLRMRP
Trigger: TGGCCGCATGCGAAGGCTCCACATGCAGCGCAGAAG...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATACACTGGCTGCCTTGGTaGGCCTCGAATTCCTCTACG +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIHWLPW*ASNSST
Trigger: CGTAGAGGAATTCGAGGCCCACCAAGGCAGCCAGTG...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGCTAAAAGAAGTGGGGTaGAGGAATAAGGGCAATAAG +
Preference number: 4 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKLKEVG*RNKGNK
Trigger: CTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAG...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGAGTCCATGCAGTTATTaGTCTTCGGGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLSPCSY*SSGPWA
Trigger: GGCCCAGGGCCCCGAAGATCAATAACTGCATGGACT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTACGTTTGACAACTCTTaGTCGATGGCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKITFDNS*SMASSE
Trigger: CTCACTGGAGGCCATCGATCAAGAGTTGTCAAACGT...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAGCATGCGGCCAAACTTaGGCTCAAGCTGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIACGQT*AQAEGR
Trigger: CCTTCCTTCAGCTTGAGCGCAAGTTTGGCCGCATGC...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAGGAGATCTTCCACAATaGAGGCTGCAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRGDLPQ*RLQPAS
Trigger: AGAAGCAGGCTGCAGCCTGCATTGTGGAAGATCTCC...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGACCTTTCGTAGAAGGTaGAGCATCCTCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLTFRRR*SILLPG
Trigger: GCCGGGCAGGAGGATGCTCCACCTTCTACGAAAGGT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGCTTACCATAAGTACATaGGTATCAGGACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVLTIST*VSGHSQ
Trigger: CTGGCTGTGTCCTGATACCCATGTACTTATGGTAAG...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGTCCCTCCTTTTCCACTaGTGCCGAGATGGCGCGTTT +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMSLLFH*CRDGAF
Trigger: AAACGCGCCATCTCGGCAGCAGTGGAAAAGGAGGGA...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGTGTGGAGCCTTCGCATaGGGCCAAACTTGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMCGAFA*GQTCAQ
Trigger: TTGAGCGCAAGTTTGGCCGCATGCGAAGGCTCCACA...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAATGAAACTTCTGCGCTaGATGTGGAGCCTTCGCATG +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRMKLLR*MWSLRM
Trigger: CATGCGAAGGCTCCACATGCAGCGCAGAAGTTTCAT...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTAAGACTGCATGCTGTTaGCCAAGCATAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKIKTACC*PSIGPR
Trigger: TCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTT...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAACAGTTGGTGGTAGTCTaGAATGTCCAATTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKQLVVV*NVQFGL
Trigger: CAACCCAAATTGGACATTCCAGACTACCACCAACTG...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp TTAGAAAAGTGGAGTGAGGCTAAGTTTTGGTTGCCTTaGCTCACATCACAAAGGCCTTTGCCTTTGACCCGT +
Preference number: 4 (lower is better)
Translates to: LEKWSEAKFWLP*LTSQRPLPLTR
Trigger: ACGGGTCAAAGGCAAAGGCCTTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCTCACTCCACTTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTCCTCCACCTCCAAATTaGTCATGTACCTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSPPPPN*SCTSAC
Trigger: ACATGCTGAGGTACATGATCAATTTGGAGGTGGAGG...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAACATAACCTTTCTCTCTaGACACAATCAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKHNLSL*TQSGKE
Trigger: CTCTTTCCCTGATTGTGTTCAGAGAGAAAGGTTATG...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGACTTGAATTTGCAGCCTaGTCTGGGGTGTTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRLEFAA*SGVFKL
Trigger: GAGCTTAAACACCCCAGAGCAGGCTGCAAATTCAAG...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGAATCTTCCTCCAAGCATaGTATTTAAACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRIFLQA*YLNPSP
Trigger: GGGGCTGGGGTTTAAATAGCATGCTTGGAGGAAGAT...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATATCAGAAAGACTAAGCTaGAAGGGACTGCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVISERLS*KGLRSS
Trigger: GCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGA...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATATTGTCATGTTCAGAGTaGGTGCAGGCGGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVILSCSE*VQAGKR
Trigger: TCTTTTCCCCGCCTGCACCCACTCTGAACATGACAA...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCCCCTACAAGGAGGCTaGAGATCTTCCACAATGCAG +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLPLQGG*RSSTMQ
Trigger: CTGCATTGTGGAAGATCTCCAGCCTCCTTGTAGGGG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATACAATGCAGAAAAGCATaGAGGCCCAGAGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIQCRKA*RPRGRM
Trigger: CATTCTTCCTCTGGGCCTTCATGCTTTTCTGCATTG...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTATAGGGTCCAAGCCATaGAAAGAAAGGCAGTATGGT +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSIGSKP*KERQYG
Trigger: ACCATACTGCCTTTCTTTGCATGGCTTGGACCCTAT...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGACTGCGTTCCAGCCTTaGTTTGGGCTCTGTCACATA +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLTAFQP*FGLCHI
Trigger: TATGTGACAGAGCCCAAAGCAAGGCTGGAACGCAGT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTATATCTCTTCCTCAATaGCCCAACTCTGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKIISLPQ*PNSGNF
Trigger: AAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGATAT...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp AGAGGAAGAATGGCACAGGCAGGTAAGCCAACAATCTaGCAACCGATTACTGAAGATTTAGAACCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGRMAQAGKPTI*QPITEDLEPKE
Trigger: TTCCTTTGGTTCTAAATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCTGGGCATTTACGTTTaGCAACTCTTGATCGATGGC +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLLGIYV*QLLIDG
Trigger: GCCATCGATCAAGAGTTGTCAAACGTAAATGCCCAG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTCTTGCAACCGATTACTaGAGATTTAGAACCAAAGGA +
Preference number: 4 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKILATDY*RFRTKG
Trigger: TCCTTTGGTTCTAAATCTTCAGTAATCGGTTGCAAG...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGAATCCACACAGATGCTaGACATCCCCTTATCCCCTA +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLNPHRC*TSPYPL
Trigger: TAGGGGATAAGGGGATGTGCAGCATCTGTGTGGATT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGGAAAATCCACACAGATaGTGCACATCCCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMENPHR*CTSPYP
Trigger: GGGATAAGGGGATGTGCAGCATCTGTGTGGATTTTC...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAACTGAATTCTTCATACTaGACAGGACACAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKLNSSY*TGHKFG
Trigger: ACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTATAGTATCATACGCTTaGCATAGAAGCCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSIVSYA*HRSRRR
Trigger: CCTTCTACGGCTTCTATGCCAAGCGTATGATACTAT...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGCACAGGACACAAATTTaGTATTTTTGCACATGTTGT +
Preference number: 4 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVHRTQI*YFCTCC
Trigger: ACAACATGTGCAAAAATACCAAATTTGTGTCCTGTG...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp CCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTaGTCTTGCAGTGGTAATACCCAAATAGCTTACCAT +
Preference number: 4 (lower is better)
Translates to: PIWVDGRVKISV*SCSGNTQIAYH
Trigger: ATGGTAAGCTATTTGGGTATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR TCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCACTGGAACTTGTCCGTaGAAATCCACACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVTGTCP*KSTQML
Trigger: CAGCATCTGTGTGGATTTTCACGGACAAGTTCCAGT...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCCAGCAGGCTCATTCCTaGTCTGGACTTTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVQQAHS*SGLLLS
Trigger: ACTGAGTAAAAGTCCAGAGCAGGAATGAGCCTGCTG...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCGGCTCATTCCTGCTCTaGACTTTTACTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVGSFLL*TFTQFP
Trigger: GGGAAACTGAGTAAAAGTCCAGAGCAGGAATGAGCC...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGTAAGCCAACAATCTTaGAACCGATTACTGAAGATT +
Preference number: 4 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSVSQQS*NRLLKI
Trigger: AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTAC...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR GCA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAAGGCTAAGTTTTGGTTaGCTTTGCTCACATCACAAA +
Preference number: 4 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIRLSFG*LCSHHK
Trigger: TTTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCT...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGTCAATGCCCCAACTCTaGCAACTTTTGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLSMPQL*QLLSCS
Trigger: TGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGA...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGAAACCTGGGATATTCTaGATAATGAAACTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMKPGIF*IMKLLR
Trigger: GCGCAGAAGTTTCATTATCCAGAATATCCCAGGTTT...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CCA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGTTAAGGATGGTTTGTTaGCTAGGAGTCAGAAAGACT +
Preference number: 4 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLLRMVC*LGVRKT
Trigger: AGTCTTTCTGACTCCTAGCCAACAAACCATCCTTAA...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
3UTR CAA 72 bp ACTGCACAGGACACAAATTTGGTATTTTTGCACATGTaGTCAATTATAAGCAAAAAGCAGGCCTGTAAACAT +
Preference number: 4 (lower is better)
Translates to: TAQDTNLVFLHM*SIISKKQACKH
Trigger: ATGTTTACAGGCCTGCTTTTTGCTTATAATTGACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 90 bp TCACGGAGCCCTTGGCACTGGTCTCGGTCCGGATCTCCTGAGGCATaGTCGGGAGCAGCCAGGCCGCCGGTTTGGGCGAGAGGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SRSPWHWSRSGSPEA*SGAARPPVWARGSL
Trigger: CAAGCTCCCTCTCGCCCAAACCGGCGGCCTGGCTGCTCCCGACCATGCCTCAGGAGATCCGGACCGAGACCAGTGCCAAGGGCTCCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS TCA 90 bp GGTTTCTTCACGGAGCCCTTGGCACTGGTCTCGGTCCGGATCTCCTaGGGCATGGTCGGGAGCAGCCAGGCCGCCGGTTTGGGCGAGAGG +
Preference number: 5 (lower is better)
Translates to: GFFTEPLALVSVRIS*GMVGSSQAAGLGER
Trigger: CCTCTCGCCCAAACCGGCGGCCTGGCTGCTCCCGACCATGCCTCAGGAGATCCGGACCGAGACCAGTGCCAAGGGCTCCGTGAAGAAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS GCA 90 bp GCAGAGGCTGCTTCCAGACCTTTCGTAGAAGGTGGAGCATCCTCCTaGCCGGCTTTGGTCGCTGCACCGCCGCGACTCCCGGCAACTGGG +
Preference number: 5 (lower is better)
Translates to: AEAASRPFVEGGASS*PALVAAPPRLPATG
Trigger: CCCAGTTGCCGGGAGTCGCGGCGGTGCAGCGACCAAAGCCGGGCAGGAGGATGCTCCACCTTCTACGAAAGGTCTGGAAGCAGCCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS GCA 90 bp ACAGCCATTTTTCTGGCTGCTGTCAGCAGCCTCGGCGGCAGAGGCTaGTTCCAGACCTTTCGTAGAAGGTGGAGCATCCTCCTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: TAIFLAAVSSLGGRG*FQTFRRRWSILLPG
Trigger: GCCGGGCAGGAGGATGCTCCACCTTCTACGAAAGGTCTGGAAGCAGCCTCTGCCGCCGAGGCTGCTGACAGCAGCCAGAAAAATGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGTCCTCCTGCCCGGCTTaGGTCGCTGCACCGCCGCGA +
Preference number: 5 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKSSCPA*VAAPPR
Trigger: TCGCGGCGGTGCAGCGACCAAAGCCGGGCAGGAGGA...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS TCA 90 bp TTGACAACTCTTGATCGATGGCCTCCAGTGAGTCCATGCAGTTATTaGTCTTCGGGGCCCTGGGCCGTGTCTCCTCTTTCACCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LTTLDRWPPVSPCSY*SSGPWAVSPLSPLL
Trigger: CAGGAGGGGTGAAAGAGGAGACACGGCCCAGGGCCCCGAAGATCAATAACTGCATGGACTCACTGGAGGCCATCGATCAAGAGTTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAAGCCAGGCCGCCGGTTaGGGCGAGAGGGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSSQAAG*GERELV
Trigger: AACAAGCTCCCTCTCGCCCAAACCGGCGGCCTGGCT...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCATTCTTCACGGAGCCCTaGGCACTGGTCTCGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSFFTEP*ALVSVR
Trigger: CCGGACCGAGACCAGTGCCAAGGGCTCCGTGAAGAA...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AACTTTCAGACCTTGCTAAAAGAAGTGGGGTGGAGGAATAAGGGCAATAAGAGATGGGCGAGAGGGAGCTaGTTGCCCCCATCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: NFQTLLKEVGWRNKGNKRWARGS*LPPSRP
Trigger: CGGCCTGGATGGGGGCAACAAGCTCCCTCTCGCCCA...TCTCTTATTGCCCTTATTCCTCCACCCCACTTCTTTTAGCAAGGTCTGAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCATCTCCACTGGCTGCCTaGGTGGGCCTCGAATTCCTC +
Preference number: 5 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSSPLAA*VGLEFL
Trigger: GAGGAATTCGAGGCCCACCAAGGCAGCCAGTGGAGA...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGGAGAGGGAGAGTTCCTaGTCCTCCGCAGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMERESS*SSAAAE
Trigger: CTCGGCCGCTGCGGAGGACAAGGAACTCTCCCTCTC...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCAGAAGACTGCATGCTGTaGGCCAAGCATAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSEDCML*AKHRSK
Trigger: CTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTC...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGCCATCAGCCACCAGCTaGTTCTATCAGATAACCAGT +
Preference number: 5 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKPSATS*FYQITS
Trigger: ACTGGTTATCTGATAGAACAAGCTGGTGGCTGATGG...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAGTCAGAAAGACTAAGCTGGAAGGGACTGCGTTCCAGCCTTGCTTTGGGCTCTCCTATAGGTCTCCCTTaGAAACTTTCAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: ESERLSWKGLRSSLALGSPIGLP*KLSDLA
Trigger: AGCAAGGTCTGAAAGTTTCAAAGGGAGACCTATAGG...AGAGCCCAAAGCAAGGCTGGAACGCAGTCCCTTCCAGCTTAGTCTTTCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AGATGGAAGACTGCATGCTGTTGGCCAAGCATAGGTCCAAGAGGAGGTGGTAAGAGCCTGCTTCTTCATTaGTTAGGAGCAGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RWKTACCWPSIGPRGGGKSLLLH*LGAGKE
Trigger: TTCCTTCCCTGCTCCTAACAAATGAAGAAGCAGGCT...CTTACCACCTCCTCTTGGACCTATGCTTGGCCAACAGCATGCAGTCTTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp TCCCAACCTAGATTAACCTCTCCACTGTGTGTGTTCAGACCTCCTAAACCCTCACCCACCTACTGGAACTaGTCCGTGAAAATCCACACA +
Preference number: 5 (lower is better)
Translates to: SQPRLTSPLCVFRPPKPSPTYWN*SVKIHT
Trigger: TGTGTGGATTTTCACGGACAAGTTCCAGTAGGTGGG...TGAGGGTTTAGGAGGTCTGAACACACACAGTGGAGAGGTTAATCTAGGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAGAGTCCATGCAGTTATaGATCTTCGGGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIESMQL*IFGALG
Trigger: GCCCAGGGCCCCGAAGATCAATAACTGCATGGACTC...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGGCAGCTGGGATCCAGTaGGTGGTAGTCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLAAGIQ*VVVWNV
Trigger: GACATTCCAGACTACCACCAACTGGATCCCAGCTGC...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCAAAGGCCTTTGCCTTaGACCCGTCCTGAACCCATC +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLQRPLP*TRPEPI
Trigger: GATGGGTTCAGGACGGGTCAAAGGCAAAGGCCTTTG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATACTGCGTTCATATTCCTaGACAAGCCCCTCATTTCGG +
Preference number: 5 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVILRSYS*TSPSFR
Trigger: CCGAAATGAGGGGCTTGTCAAGGAATATGAACGCAG...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGTCCAGGCCGCTCATTTaGGAAGAAGTCAGACTAGTG +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLSRPLI*EEVRLV
Trigger: CACTAGTCTGACTTCTTCCAAAATGAGCGGCCTGGA...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAAGAATGGCACAGGCAGGTAAGCCAACAATCTTGCAACCGATTACTGAAGATTTGGTCTGAAAACCAGTaGAAGAAACTAGGGATAGTG +
Preference number: 5 (lower is better)
Translates to: EEWHRQVSQQSCNRLLKIWSENQ*KKLGIV
Trigger: CACTATCCCTAGTTTCTTCAACTGGTTTTCAGACCA...AATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACCTGCCTGTGCCATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCGTTCCAGCCTTGCTTaGGGCTCTGTCACATATTAC +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLRSSLA*GSVTYY
Trigger: GTAATATGTGACAGAGCCCAAAGCAAGGCTGGAACG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp ATCTCTTCCTCAATGCCCCAACTCTGGCAACTTTTGTCATGTTCAGAGTGGGTGAAATGCCTAAAGAAGTaGCTCACATTAAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: ISSSMPQLWQLLSCSEWVKCLKK*LTLRMV
Trigger: AACCATCCTTAATGTGAGCAACTTCTTTAGGCATTT...CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTGGGGCATTGAGGAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATACAACTCTGGCAACTTTaGTCATGTTCAGAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIQLWQL*SCSEWV
Trigger: CACCCACTCTGAACATGACAAAAGTTGCCAGAGTTG...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGCCTGGGCATTTACGTTaGACAACTCTTGATCGATGG +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLPGHLR*TTLDRW
Trigger: CCATCGATCAAGAGTTGTCAAACGTAAATGCCCAGG...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAACACAATCAGGGAAAGAGCAAATTAAACAAAAAGCCTGCTTTGCCAGTTTTGAAGATGAACTTGAATTaGCAGCCTGCTCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: EHNQGKSKLNKKPALPVLKMNLN*QPALGC
Trigger: ACACCCCAGAGCAGGCTGCAAATTCAAGTTCATCTT...CAAAACTGGCAAAGCAGGCTTTTTGTTTAATTTGCTCTTTCCCTGATTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AAGGAGAAGAGTGACCTACAAAATGCTACCCTAGAAGCAGTCCAAGGCCCAAAAGTTAAGATATCAGTTTaGTCTTGCAGTGGTAATACC +
Preference number: 5 (lower is better)
Translates to: KEKSDLQNATLEAVQGPKVKISV*SCSGNT
Trigger: GGTATTACCACTGCAAGACAAAACTGATATCTTAAC...TTTTGGGCCTTGGACTGCTTCTAGGGTAGCATTTTGTAGGTCACTCTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCACATCACAAAGGCCTTaGCCTTTGACCCGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVTSQRP*PLTRPE
Trigger: TTCAGGACGGGTCAAAGGCAAAGGCCTTTGTGATGT...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAGAGGCTAAGTTTTGGTaGCCTTTGCTCACATCACAA +
Preference number: 5 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIEAKFW*PLLTSQ
Trigger: TTGTGATGTGAGCAAAGGCAACCAAAACTTAGCCTC...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCTCCTCCACCTCCAAATaGATCATGTACCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVSSTSK*IMYLSM
Trigger: CATGCTGAGGTACATGATCAATTTGGAGGTGGAGGA...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTGGTAATAATTAAGGATGGTTTGTaGGCTAGGAGTCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: QFGLMAGLRYQFCLAVVIIKDGL*ARSQKD
Trigger: GTCTTTCTGACTCCTAGCCAACAAACCATCCTTAAT...TATTACCACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCGGCCACAGTTCTCCTTaGATAATCTCTGCAATTCTG +
Preference number: 5 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVGHSSP*IISAIL
Trigger: CAGAATTGCAGAGATTATCAAAGGAGAACTGTGGCC...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp AAGCAGGCCTGTAAACATCAATTTTGTCATAGGCTGAAACAGAGAAAGGAAATGAATGTCCAATTTGGGTaGATGGCCGGGTTAAGATAT +
Preference number: 5 (lower is better)
Translates to: KQACKHQFCHRLKQRKEMNVQFG*MAGLRY
Trigger: ATATCTTAACCCGGCCATCAACCCAAATTGGACATT...CATTTCCTTTCTCTGTTTCAGCCTATGACAAAATTGATGTTTACAGGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp GAATGTCCAATTTGGGTTGATGGCCGGGTTAAGATATCAGTTTTGTCTTGCAGTCCTGCTTTGCCAGTTTaGTTTTCTGTTAATAAGCTA +
Preference number: 5 (lower is better)
Translates to: ECPIWVDGRVKISVLSCSPALPV*FSVNKL
Trigger: TAGCTTATTAACAGAAAACAAAACTGGCAAAGCAGG...ACTGCAAGACAAAACTGATATCTTAACCCGGCCATCAACCCAAATTGGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS-3UTR CAA 90 bp CTGAATTCTTCATACTGCACAGGACACAAATTTGGTATTTTTGCACATGTTGTCGGTAAGCCAACAATCTaGCAACCGATTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LNSSYCTGHKFGIFAHVVGKPTI*QPITED
Trigger: ATCTTCAGTAATCGGTTGCAAGATTGTTGGCTTACC...GACAACATGTGCAAAAATACCAAATTTGTGTCCTGTGCAGTATGAAGAATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp GGCTTTGGTCGCTGCACCGCCGCGACTCCCGGCAACTaGGACGCGGAGCGCGGGGCCACAGTCGACAGGATC +
Preference number: 6 (lower is better)
Translates to: GFGRCTAATPGN*DAERGATVDRI
Trigger: GATCCTGTCGACTGTGGCCCCGCGCTCCGCGTCCCAGTTGCCGGGAGTCGCGGCGGTGCAGCGACCAAAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp CCTGAGGCATGGTCGGGAGCAGCCAGGCCGCCGGTTTaGGCGAGAGGGAGCTTGTTGCCCCCATCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PEAWSGAARPPV*ARGSLLPPSRP
Trigger: CGGCCTGGATGGGGGCAACAAGCTCCCTCTCGCCCAAACCGGCGGCCTGGCTGCTCCCGACCATGCCTCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS TCA 72 bp ACGGAGCCCTTGGCACTGGTCTCGGTCCGGATCTCCTaGGGCATGGTCGGGAGCAGCCAGGCCGCCGGTTTG +
Preference number: 6 (lower is better)
Translates to: TEPLALVSVRIS*GMVGSSQAAGL
Trigger: CAAACCGGCGGCCTGGCTGCTCCCGACCATGCCTCAGGAGATCCGGACCGAGACCAGTGCCAAGGGCTCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp CCTTGGCACTGGTCTCGGTCCGGATCTCCTGAGGCATaGTCGGGAGCAGCCAGGCCGCCGGTTTGGGCGAGA +
Preference number: 6 (lower is better)
Translates to: PWHWSRSGSPEA*SGAARPPVWAR
Trigger: TCTCGCCCAAACCGGCGGCCTGGCTGCTCCCGACCATGCCTCAGGAGATCCGGACCGAGACCAGTGCCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS GCA 72 bp GCTTCCAGACCTTTCGTAGAAGGTGGAGCATCCTCCTaGCCGGCTTTGGTCGCTGCACCGCCGCGACTCCCG +
Preference number: 6 (lower is better)
Translates to: ASRPFVEGGASS*PALVAAPPRLP
Trigger: CGGGAGTCGCGGCGGTGCAGCGACCAAAGCCGGGCAGGAGGATGCTCCACCTTCTACGAAAGGTCTGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp TGTGTCGCCTCGGTTTCTTCACGGAGCCCTTGGCACTaGTCTCGGTCCGGATCTCCTGAGGCATGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: CVASVSSRSPWH*SRSGSPEAWSG
Trigger: TCCCGACCATGCCTCAGGAGATCCGGACCGAGACCAGTGCCAAGGGCTCCGTGAAGAAACCGAGGCGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS GCA 72 bp TTTCTGGCTGCTGTCAGCAGCCTCGGCGGCAGAGGCTaGTTCCAGACCTTTCGTAGAAGGTGGAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: FLAAVSSLGGRG*FQTFRRRWSIL
Trigger: GAGGATGCTCCACCTTCTACGAAAGGTCTGGAAGCAGCCTCTGCCGCCGAGGCTGCTGACAGCAGCCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS TCA 72 bp CTTGATCGATGGCCTCCAGTGAGTCCATGCAGTTATTaGTCTTCGGGGCCCTGGGCCGTGTCTCCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: LDRWPPVSPCSY*SSGPWAVSPLS
Trigger: TGAAAGAGGAGACACGGCCCAGGGCCCCGAAGATCAATAACTGCATGGACTCACTGGAGGCCATCGATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CAA 72 bp AGAGGGAGCTTGTTGCCCCCATCCAGGCCGCTCATTTaGGAAGAAGTCAGACTAGTGGGAGAGGGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: RGSLLPPSRPLI*EEVRLVGEGEF
Trigger: GAACTCTCCCTCTCCCACTAGTCTGACTTCTTCCAAAATGAGCGGCCTGGATGGGGGCAACAAGCTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp TCATCTTGGCCACTGATCATAGGTGACAGCTGGGGGTaGTTTCGAAAGGCAGTAACCCAGAAACCTGGGATA +
Preference number: 6 (lower is better)
Translates to: SSWPLIIGDSWG*FRKAVTQKPGI
Trigger: TATCCCAGGTTTCTGGGTTACTGCCTTTCGAAACCACCCCCAGCTGTCACCTATGATCAGTGGCCAAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420283.3
CDS CCA 72 bp TTTCGAAAGGCAGTAACCCAGAAACCTGGGATATTCTaGATAATGAAACTTCTGCGCTGCATGTGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: FRKAVTQKPGIF*IMKLLRCMWSL
Trigger: AAGGCTCCACATGCAGCGCAGAAGTTTCATTATCCAGAATATCCCAGGTTTCTGGGTTACTGCCTTTCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420283.3