RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPOAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000005379

Ensembl transcript IDs: ENST00000268893.10, ENST00000343736.9, ENST00000577871.1, ENST00000578486.1, ENST00000578511.5, ENST00000580669.6, ENST00000581675.5, ENST00000581692.2, ENST00000582679.1, ENST00000583624.1, ENST00000585149.1

Found 1197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCAGGCCCCGGCAGGGAAGGATGGAGCACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGCCTTTCTCCTTCCTGGGCCTGTGCA +
Preference number: 1 (lower is better)
Translates to: PAGPGREGWSTTGAG*GPLWLGLSPSWACA
Trigger: TGCACAGGCCCAGGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGGGCCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp AGCCATCAGGGGGCACAGGCTCCTTTCTCCCTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAGAAGGGACTAGCGCAGCACTGTGGG +
Preference number: 1 (lower is better)
Translates to: SHQGAQAPFSLQGPS*DWEGWQKGLAQHCG
Trigger: CCCACAGTGCTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAGGGAGAAAGGAGCCTGTGCCCCCTGATGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp GGCAGGGAAGGATGGAGCACGACGGGGGCAGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCCTGGGCCTGTGCAGTGGAAGCGAGG +
Preference number: 1 (lower is better)
Translates to: GREGWSTTGAGWGPL*LGLSPSWACAVEAR
Trigger: CCTCGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp GTCCTGGGACTGGGAAGGGTGGCAGAAGGGACTAGCGCAGCACTGTaGGACACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCC +
Preference number: 1 (lower is better)
Translates to: VLGLGRVAEGTSAAL*DTSRRGGWTRTRGS
Trigger: GGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGTGTCCCACAGTGCTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp GAAGGGACTAGCGCAGCACTGTGGGACACTAGTAGACGAGGTGGGTaGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCTCAGTGAC +
Preference number: 1 (lower is better)
Translates to: EGTSAALWDTSRRGG*TRTRGSWVQSWLSD
Trigger: GTCACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGTGTCCCACAGTGCTGCGCTAGTCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR GCA 90 bp CTGCTCAGCAGAGACAGTGATCTGGGGGCCTCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAGCTTCACTCCTTCTTCCCAGAGCCC +
Preference number: 1 (lower is better)
Translates to: LLSRDSDLGASQGLF*LQDGPQLHSFFPEP
Trigger: GGGCTCTGGGAAGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAGATCACTGTCTCTGCTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR TCA 90 bp GGCCTGTGCAGTGGAAGCGAGGTGGAGGAAGCTGAACTGAGGCACTaGGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGG +
Preference number: 1 (lower is better)
Translates to: GLCSGSEVEEAELRH*VYTYIQAPPACPLG
Trigger: CCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCGCTTCCACTGCACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR TCA 90 bp TGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCCCT +
Preference number: 1 (lower is better)
Translates to: WVDQDARVLGPVLAQ*PWSSYILTVGSVSP
Trigger: AGGGGAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR TCA 90 bp CCTTCCTGGGCCTGTGCAGTGGAAGCGAGGTGGAGGAAGCTGAACTaGGGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCC +
Preference number: 1 (lower is better)
Translates to: PSWACAVEARWRKLN*GTEYIHIYRLRPPA
Trigger: GGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp TGGGACACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCA +
Preference number: 1 (lower is better)
Translates to: WDTSRRGGWTRTRGS*VQSWLSDLGQVTYS
Trigger: TGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR GCA 90 bp CCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGAATaGCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCT +
Preference number: 1 (lower is better)
Translates to: PFSSDLHQGSLIPSE*HSVNAEERGLWAQS
Trigger: AGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATAAAATCCAGTGCAAACTTTCCTTCA +
Preference number: 1 (lower is better)
Translates to: GTEYIHIYRLRPPAR*GDGAPIKSSANFPS
Trigger: TGAAGGAAAGTTTGCACTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CAA 90 bp CGGCAGGGAAGGATGGAGCACGACGGGGGCAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTCCTGGGCCTGTGCAGTGGAAGCGAG +
Preference number: 2 (lower is better)
Translates to: RQGRMEHDGGRVGPT*AWPFSFLGLCSGSE
Trigger: CTCGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 2 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 2 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR TCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 2 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 2 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCTTTCGGCCCCGCTaGCCCCAGGGTCTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQRFRPR*PQGLWG
Trigger: CCCCCAAAGACCCTGGGGCCAGCGGGGCCGAAAGCG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 2 (lower is better)
Translates to: GPLRASSACRMGHSFTPSTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATA +
Preference number: 2 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRPPAR*GDGAPI
Trigger: TATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVTTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSSLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 2 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: REDRIRTARAIRGHRLLSEERGL*AQSEPS
Trigger: GGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 2 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 2 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 2 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 2 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDEERGL*AQSEPS
Trigger: GGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRTRGS*VQSWLS
Trigger: ACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACCCGGCAGGGAAGGATaGAGCACGACGGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKPGREG*STTGAG
Trigger: CCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 2 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDSQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCCTGGGCCTGTGCAGTaGAAGCGAGGTGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYPGPVQ*KRGGGS
Trigger: GCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGWGPL*LGLSPS
Trigger: GGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 2 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRTTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGGGACCCTTGTGTGGTaGAGCCCCAGTCATGTTGCT +
Preference number: 2 (lower is better)
Translates to: LIPSECHSVNAEERGLWAGTLVW*SPSHVA
Trigger: AGCAACATGACTGGGGCTGCACCACACAAGGGTCCC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKRTRGS*VQSWLS
Trigger: ACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCT...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGAGGTGGAGGAAGCTaGACTGAGGCACTGAGTATA +
Preference number: 2 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQRGGGS*TEALSI
Trigger: TATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTGGGACTGGGAAGGGTaGCAGAAGGGACTAGCGCAG +
Preference number: 2 (lower is better)
Translates to: LESNEQNKANPTPLSAPLWDWEG*QKGLAQ
Trigger: CTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCA...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLTTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 2 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACTGGGGACCCTTGTGTaGTGCAGCCCCAGTCATGTT +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKLGTLV*CSPSHV
Trigger: AACATGACTGGGGCTGCACCACACAAGGGTCCCCAG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 2 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLEERGL*AQSEPS
Trigger: GGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGGACTGGGAAGGGTaGCAGAAGGGACTAGCGCAG +
Preference number: 2 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWDWEG*QKGLAQ
Trigger: CTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 2 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCTGGGCCTGTGCAGTaGAAGCGAGGTGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPGPVQ*KRGGGS
Trigger: GCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGWGPL*LGLSPS
Trigger: GGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGGACCCTTGTGTGGTaGAGCCCCAGTCATGTTGCT +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGTLVW*SPSHVA
Trigger: AGCAACATGACTGGGGCTGCACCACACAAGGGTCCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LESNEQNKANPTPLSAPLSLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 2 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 2 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTGGAGGAAGCTGAACTaGGGCACTGAGTATATACAT +
Preference number: 2 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYWRKLN*GTEYIH
Trigger: ATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 2 (lower is better)
Translates to: ELESNEQNKANPTPLSAPSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCTGGGGACCCTTGTGTaGTGCAGCCCCAGTCATGTT +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLGTLV*CSPSHV
Trigger: AACATGACTGGGGCTGCACCACACAAGGGTCCCCAG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCTTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 2 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CAA 90 bp TTCATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTaGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGG +
Preference number: 2 (lower is better)
Translates to: FILKEPFSSDLHQGS*IPSECHSVNAEERG
Trigger: CCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATA +
Preference number: 2 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPVLAQ*PWSSYI
Trigger: TATGTAACTTGACCAAGGTCACTGAGCCAGGACTGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR TCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCGAGGTGGAGGAAGCTaGACTGAGGCACTGAGTATA +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRGGGS*TEALSI
Trigger: TATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 2 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 2 (lower is better)
Translates to: ELESNEQNKANPTPLSAPQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 2 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGGCCCTGGGGACCCTaGTGTGGTGCAGCCCCAGTC +
Preference number: 3 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGPWGP*CGAAPV
Trigger: GACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGGGCCCTGGGGACCCTaGTGTGGTGCAGCCCCAGTC +
Preference number: 3 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSGPWGP*CGAAPV
Trigger: GACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR CCA 72 bp AGCGCAGCACTGTGGGACACTAGTAGACGAGGTGGGTaGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGG +
Preference number: 3 (lower is better)
Translates to: SAALWDTSRRGG*TRTRGSWVQSW
Trigger: CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGTGTCCCACAGTGCTGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 72 bp TCTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATaGGCCACAGCTTCACTCCTTCTTCCCAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: SGGLSGPLLPAG*ATASLLLPRAQ
Trigger: CTGGGCTCTGGGAAGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR CCA 72 bp CTGGGAAGGGTGGCAGAAGGGACTAGCGCAGCACTGTaGGACACTAGTAGACGAGGTGGGTGGACCAGGACG +
Preference number: 3 (lower is better)
Translates to: LGRVAEGTSAAL*DTSRRGGWTRT
Trigger: CGTCCTGGTCCACCCACCTCGTCTACTAGTGTCCCACAGTGCTGCGCTAGTCCCTTCTGCCACCCTTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 72 bp AGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGTGACCTTGGTCAAGTT +
Preference number: 3 (lower is better)
Translates to: SRRGGWTRTRGS*VQSWLSDLGQV
Trigger: AACTTGACCAAGGTCACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR GCA 72 bp AGAGACAGTGATCTGGGGGCCTCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAGCTTCACTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: RDSDLGASQGLF*LQDGPQLHSFF
Trigger: GAAGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAGATCACTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR CCA 72 bp GAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCCCTGCTCAGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: ECHSVNAEERGL*AQSEPSLLSRD
Trigger: GTCTCTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 72 bp TATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAGTGCAAACTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: YIQAPPACPLGR*GSNKIQCKLSF
Trigger: GAAGGAAAGTTTGCACTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 72 bp CCCACCATTCCACACCCCTGGAGACCAAGGTCAAGGTaGGGGTTCAGTCAAACTATCTCCCACCACAGCAAA +
Preference number: 3 (lower is better)
Translates to: PTIPHPWRPRSR*GFSQTISHHSK
Trigger: TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCAGCCCCAGTCATGTaGCTCTCTCTACATATATCT +
Preference number: 3 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSAAPVM*LSLHIS
Trigger: AGATATATGTAGAGAGAGCAACATGACTGGGGCTGC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRVGPT*AWPFSF
Trigger: GAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR TCA 72 bp GCCTGTGCAGTGGAAGCGAGGTGGAGGAAGCTGAACTaGGGCACTGAGTATATACATATATACAGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: ACAVEARWRKLN*GTEYIHIYRLR
Trigger: GCGGAGCCTGTATATATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCGCTTCCACTGCACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CCA 72 bp TATATACATATATACAGGCTCCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATAAAATCCAGTGCAAAC +
Preference number: 3 (lower is better)
Translates to: YIHIYRLRPPAR*GDGAPIKSSAN
Trigger: GTTTGCACTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGGAGCTGCTTCCCCTaGGAGAAGAAACCCCACACC +
Preference number: 3 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRSCFP*EKKPHT
Trigger: GGTGTGGGGTTTCTTCTCCAAGGGGAAGCAGCTCCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGCAGCCCCAGTCATGTaGCTCTCTCTACATATATCT +
Preference number: 3 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKAAPVM*LSLHIS
Trigger: AGATATATGTAGAGAGAGCAACATGACTGGGGCTGC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
3UTR-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTGGCTCAGTGACCTaGGTCAAGTTACATACTCAC +
Preference number: 3 (lower is better)
Translates to: ELESNEQNKANPTPLSAPPGSVT*VKLHTH
Trigger: GTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CAA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCTGGCTCAGTGACCTaGGTCAAGTTACATACTCAC +
Preference number: 3 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPGSVT*VKLHTH
Trigger: GTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR-3UTR CAA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGCAGCCCCAGTCATGTaGCTCTCTCTACATATATCT +
Preference number: 3 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLAAPVM*LSLHIS
Trigger: AGATATATGTAGAGAGAGCAACATGACTGGGGCTGC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTGGCTCCTCCCCGGCTaGCCTCTGGCGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSWLLPG*PLAQLG
Trigger: TCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCA...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGAGGCCGCCTGCGGCTTaGGGGCTTCTCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWRPPAA*GLLRGA
Trigger: GGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSQPGVS*VPCPGR
Trigger: GCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGGGAGTGTGGTGAACTaGAGGGTGGCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSGSVVN*RVAARC
Trigger: GCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGTATTTGGCGCCTGCTaGGCCCGTGCTCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSVFGAC*ARAPWV
Trigger: CACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATAC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGGGGTAGGGAGGATGTaGAGAGGCCACCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSGVGRM*RGHRQL
Trigger: CAGCTGTCGGTGGCCTCTGCACATCCTCCCTACCCC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGCAGGCCCTGGCTCTTaGGAAGGGCTGAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSAGPGS*EGLSPS
Trigger: AGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCGTGGGGCGACATGGTaGGCACGACCACCTCACGAC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWRGATW*ARPPHD
Trigger: GTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGTCCACTCGGCCTCCTaGTTGGCCAGTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSVHSAS*LASEGA
Trigger: AGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGAC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCGGACAGGCCTCTCCTaGAGTCCACTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWRTGLS*SPLGLL
Trigger: CAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGTGGCTCCTTGGCTCTaGCCGTCGCACTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSVAPWL*PSHCGL
Trigger: GAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCAC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCCCCGGCTGCCCTCTaGCGCAGCTGGGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSPAAL*RSWEQG
Trigger: TCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCTCCAGCACGGCCTTaGGTGGCGCCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSPARP*VAPQAP
Trigger: TGGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCAGGGCCCTTGGGGTaGGAGCTGAGCCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPGPLG*ELSLHL
Trigger: CAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGCTTGGGGCCTGAATTaGCCTTCGGAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWAWGLN*PSEAPW
Trigger: CCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGCGGCCTCTCCGCTCTaGTTCCCCTTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWAASPL*FPFLPG
Trigger: GCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTAGGAGCTGCTGGGGGTaGTCCCCAGTGGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSRSCWG*SPVVRC
Trigger: ACAGCGGACCACTGGGGATCACCCCCAGCAGCTCCT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCTGTGCCAGGAGGCTaGACTGCTCGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPVPGG*TARFGC
Trigger: GCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAGAACAGCCTGCCCCTaGCTTCTCCTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSRTACP*LLLLLV
Trigger: GACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCCAGGTCTTCGGGGCTaGCCACTGTCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSPGLRG*PLSQPS
Trigger: GCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGGAAGACTTTGGGGTaGAGCGCCCAGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLRKTLG*SAQGSP
Trigger: CGGGCTCCCCTGGGCGCTGCACCCCAAAGTCTTCCG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGACGCTGTGGGCCAGCTaGTTGAGGACCACCAGACGG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWTLWAS*LRTTRR
Trigger: CCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCACACCTGCAGCAGCTaGAGCTGGGACAACTCCACC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSHTCSS*SWDNST
Trigger: GGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCGGACAGGCCTCTCCTaGAGTCCACTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSRTGLS*SPLGLL
Trigger: CAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTCTGCCCGTCGCACTaGGGCCTCTCCGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLCPSH*GLSALV
Trigger: AACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGTCCTAAGGAGGCCTaGGTCGATGGGCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGPKEA*VDGLLA
Trigger: GGCAAGCAGCCCATCGACCCAGGCCTCCTTAGGACC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTCATCCTCTGGCCTCTaGCAGGCGGGTCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSSSGL*QAGPEL
Trigger: CAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTCTGGGCTTCAGCCTaGGCCTGCTGCAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLWASA*ACCSLR
Trigger: CCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAGTAGGTACTGGGGCTaGCAGGTGGGCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSSRYWG*QVGTLP
Trigger: GGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCCCCGTGGGGCGACATaGTGCGCACGACCACCTCAC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHPRGAT*CARPPH
Trigger: GTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWEERGL*AQSEPS
Trigger: GGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCGGCAGGGAAGGATaGAGCACGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSPGREG*STTGAG
Trigger: CCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTTGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTTGCCGGGCACCCAGGTaGTCTCAGCAGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSCRAPR*SQQMWL
Trigger: CAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCA...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCTCCTGCTTGGCCAGTaGGGGAGCTGCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDLLLGQ*GSCGAR
Trigger: CCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGACTGGCGAGGGTCATaGCAGGCCAGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSDWRGS*QASPSP
Trigger: GGGAGAGGGGCTGGCCTGGCATGACCCTCGCCAGTC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGGGCAGACAAGCCTCTaGTCCTTCAGGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSGQTSL*SFRVSS
Trigger: GGAACTGACCCTGAAGGAGCAGAGGCTTGTCTGCCC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTTGCGCAGCGCGATCTaGCTCTGCAGCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHLRSAI*LCSRST
Trigger: GGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTGCTCCACCTCCAGCTaGTGCCGCCGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDCSTSS*CRRWAT
Trigger: GGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCCAAGGGGCCCGGGTaGAGGCGGAAAGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSKGPG*RRKAWS
Trigger: ACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCAGGGAGACACTGTCTaGCTCCAGCTCCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSQGDTV*LQLLYL
Trigger: GAGGTAGAGGAGCTGGAGGCAGACAGTGTCTCCCTG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCCGTGTAGCTCCACTTaGTCAGGAGGCGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSPCSST*SGGGSQ
Trigger: CTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCGTGGGGCGACATGGTaGGCACGACCACCTCACGAC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHRGATW*ARPPHD
Trigger: GTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTCTCTGGAAGGGCTTaGAGGGGGTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLSGRA*RGCSWR
Trigger: CCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGCCCAGCCCCAGCAATaGAGGTTCAGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLAQPQQ*RFRRAR
Trigger: CCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGCCCAGCCCCAGCAATaGAGGTTCAGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIAQPQQ*RFRRAR
Trigger: CCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCTGCCCGTCGCACTaGGGCCTCTCCGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLLCPSH*GLSALV
Trigger: AACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCCCCGCTGGAGCAGTTaGTGTCTCCCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHPRWSS*CLPAGL
Trigger: CAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGCGGGTCCAGAGCTaGATGCTTGCTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRRVQS*MLAGPG
Trigger: GCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCTTCCCACACTGCTTTaGCCCCCGCTACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWLPTLL*PPLLLP
Trigger: TGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACGATGGACCCGCAGCTaGCTGGGCACCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRWTRS*LGTTPA
Trigger: GGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGTGGCTGTCAACCGATaGACCCGCAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLVAVNR*TRSWLG
Trigger: GCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCAC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATGTGGCTGTCAACCGATaGACCCGCAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHVAVNR*TRSWLG
Trigger: GCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCAC...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGCTGGAGGGTCCTCGTaGGACCCTTTTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSAGGSS*DPFAIS
Trigger: AGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGCCCCAGCCTCCTCCTaGGAGCAAGGTGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSAPASS*EQGAGG
Trigger: CCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTGGGCCCGTGCTCCCTaGGTGGAGCTGGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSWARAP*VELEAG
Trigger: TCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCA...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAGGCCGCCTGCGGCTTaGGGGCTTCTCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDRPPAA*GLLRGA
Trigger: GGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGTGTTCTCGGGGATCTaGAGGCCGCCTGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLVFSGI*RPPAAW
Trigger: CCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACAC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCACCCCTCTCCCGTGTaGGGCCCAGTCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSHPSPV*GPVVQR
Trigger: CCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGGCGTGGGTAGGGCTTaGGGCCTGAATTGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSGVGRA*GLNWPS
Trigger: CGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGCGGCCTCTCCGCTCTaGTTCCCCTTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSAASPL*FPFLPG
Trigger: GCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGC...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGWGPL*LGLSPS
Trigger: GGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTCAGAGGGTGGGGGATaGAGTGGATCGGGTAACGGC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSEGGG*SGSGNG
Trigger: GCCGTTACCCGATCCACTCCATCCCCCACCCTCTGA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGGAGCCTCGAGATGGTaGGCTCCGAGGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSGASRW*APRRAE
Trigger: CTCAGCCCTCCTCGGAGCCCACCATCTCGAGGCTCC...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCCAGGAGCCTCGAGATaGTGGGCTCCGAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSPGASR*WAPRRA
Trigger: AGCCCTCCTCGGAGCCCACCATCTCGAGGCTCCTGG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR TCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACCAGGCGCTTGGCAATaGCCGCCAGCTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIPGAWQ*PPARRS
Trigger: AGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGTGGCTCTCCCACTaGGCCGGGAGTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLWLSH*AGSSPP
Trigger: TGGAGGAGAACTCCCGGCTCAGTGGGAGAGCCACAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATTCGAGGGACCCCAGTaGGAGTGGCAGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIFEGPQ*EWQGQA
Trigger: AGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTGCAGTGCTTGGCCTaGGGACTCGGACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLQCLA*GLGHLS
Trigger: AGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTCCTCCTCGTTCTCTaGCTCTCAGCCTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLLLVL*LSAWGV
Trigger: GACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGAGGCCACCGACAGCTaGGCCTGGGTGAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSEATDS*AWVRVR
Trigger: ACGCACCCTCACCCAGGCGCAGCTGTCGGTGGCCTC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACCCACAAAGGAGGCTaGAGAAGGCGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHTHKGG*RRRQGC
Trigger: GCAGCCCTGGCGCCTTCTGCAGCCTCCTTTGTGGGT...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGGGTCCAGAGCTGGATaGTTGCTGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSGSRAG*LLAQAG
Trigger: CCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAGCGCGATCTGCCTCTaGAGCCGCAGCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDSAICL*SRSTSR
Trigger: GCGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCGCT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGCGTCTCCCGCTGGTTaGGCAGCGCGATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLASPAG*AARSAS
Trigger: AGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATGCCAGGAGGCTGAACTaGTCGGTTTGGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHARRLN*SVWLRH
Trigger: GTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGC...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACGGAAGACTTTGGGGTaGAGCGCCCAGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRKTLG*SAQGSP
Trigger: CGGGCTCCCCTGGGCGCTGCACCCCAAAGTCTTCCG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCTCTCTGGAAGGGCTTaGAGGGGGTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHLSGRA*RGCSWR
Trigger: CCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGACAGGTCTGAGTTaGGGCCGTGGTCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLTGLS*GRGPRG
Trigger: CCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGCCCAGCCCCAGCAATaGAGGTTCAGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDAQPQQ*RFRRAR
Trigger: CCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGGGCCTTCCTACAGTTaGTGTGCCCCAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIGPSYS*CAPGLP
Trigger: GGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGGACCCTTGTGTGGTaGAGCCCCAGTCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGTLVW*SPSHVA
Trigger: AGCAACATGACTGGGGCTGCACCACACAAGGGTCCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTAGGCGGGTCCAGAGCTaGATGCTTGCTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSRRVQS*MLAGPG
Trigger: GCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGCTCGGAAGACTTTaGGGTGCAGCGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRLGRL*GAAPRG
Trigger: TCCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGTGCTAGGAAGACCTaGATCCTGGCTCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLRARKT*ILAPPR
Trigger: CCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGTGGCTGTCAACCGATaGACCCGCAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLVAVNR*TRSWLG
Trigger: GCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCAC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTGCAGCAGCTGCAGCTaGGACAACTCCACCAGTACA +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSCSSCS*DNSTST
Trigger: TGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCA...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCCCCGTGGGGCGACATaGTGCGCACGACCACCTCAC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDPRGAT*CARPPH
Trigger: GTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCAGGAGACTCGGGCTaGCAGGCTGGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAAGDSG*QAGRSQ
Trigger: CTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGCAGGAGACTCGGGCTaGCAGGCTGGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYAGDSG*QAGRSQ
Trigger: CTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCTTTTGCCATCTCTCTaGAAGGGCTTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSLLPSL*KGLQGV
Trigger: CACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCTGGGAGCAAGGTGCTaGAGGGTCCTCGTGGGACCC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSLGARC*RVLVGP
Trigger: GGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCCCCAGCCTCCTCCTaGGAGCAAGGTGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSAPASS*EQGAGG
Trigger: CCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGTATTTGGCGCCTGCTaGGCCCGTGCTCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLVFGAC*ARAPWV
Trigger: CACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATAC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATAGGCCGCCTGCGGCTTaGGGGCTTCTCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYRPPAA*GLLRGA
Trigger: GGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCT...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGTGTTCTCGGGGATCTaGAGGCCGCCTGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSVFSGI*RPPAAW
Trigger: CCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACAC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCCTTCGGAGGCCCCCTaGGCCTTCCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSPSEAP*AFLQLL
Trigger: CAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGCTTGGGGCCTGAATTaGCCTTCGGAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSAWGLN*PSEAPW
Trigger: CCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGCGGCCTCTCCGCTCTaGTTCCCCTTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSAASPL*FPFLPG
Trigger: GCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACGGACACCTCTCTTCTaGGGGCCCCTCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRTPLF*GPLRPE
Trigger: CTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCGGACACCTCTCTTCTaGGGGCCCCTCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDRTPLF*GPLRPE
Trigger: CTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQQPGVS*VPCPGR
Trigger: GCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVQPGVS*VPCPGR
Trigger: GCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRPPAR*GDGAPI
Trigger: TATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCGCTTTCGGCCCCGCTaGCCCCAGGGTCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYRFRPR*PQGLWG
Trigger: CCCCCAAAGACCCTGGGGCCAGCGGGGCCGAAAGCG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCGCTTTCGGCCCCGCTaGCCCCAGGGTCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARFRPR*PQGLWG
Trigger: CCCCCAAAGACCCTGGGGCCAGCGGGGCCGAAAGCG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGGTCCCGGGCTCGCTaGCGGGCTAGGGCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARSRAR*RARAFR
Trigger: TCGGAAGGCCCTAGCCCGCCAGCGAGCCCGGGACCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGGGGACCCTTGTGTaGTGCAGCCCCAGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLGTLV*CSPSPD
Trigger: GTCAGGACTGGGGCTGCACCACACAAGGGTCCCCAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581675.5
CDS-3UTR TCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGAGGAGCTGCTGGGGGTaGTCCCCAGTGGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQRSCWG*SPVVRC
Trigger: ACAGCGGACCACTGGGGATCACCCCCAGCAGCTCCT...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTCTTCCGCTTCTTGCTaGGCTCCGATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSSASC*APIPAA
Trigger: AGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCTACACTCAGGAAACTaGGTTCAGGGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSLHSGN*VQGLSC
Trigger: ACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTGCCGGGCACCCAGGTaGTCTCAGCAGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLCRAPR*SQQMWL
Trigger: CAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATGCCGGGCACCCAGGTaGTCTCAGCAGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYICRAPR*SQQMWL
Trigger: CAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCTGCTGGGAGTGTGGTaGACTGCAGGGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDLLGVW*TAGWQP
Trigger: GGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGGCTGTCCTCTCCTCTaGGGTGCCCAGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDGCPLL*GAQHCC
Trigger: GCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCTGCAGTGCTTGGCCTaGGGACTCGGACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHLQCLA*GLGHLS
Trigger: AGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCTCTGGGCCCAGTCTaGGCCTTCCCTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSALGPV*AFPAQQ
Trigger: CTGCTGAGCAGGGAAGGCTCAGACTGGGCCCAGAGC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTGCTGCTCTTTCGCTTaGTGGGTGGCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSCCSFA*WVAGLV
Trigger: GACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGGAGCAGGCGCCCCTaGTCTGGCCTGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGSRRP*SGLESR
Trigger: CCTGCTCTCCAGGCCAGAGCAGGGGCGCCTGCTCCC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTTCTCCCACTCCACCTaGTCCTTCTCTGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWFSHST*SFSVAL
Trigger: GAGAGCCACAGAGAAGGAGCAGGTGGAGTGGGAGAA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTCCAAGGGGCCCGGGTaGAGGCGGAAAGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSSKGPG*RRKAWS
Trigger: ACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGA...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTGGCATGGGCCAAGTTaGTATTGCCGGGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHWHGPS*YCRAPR
Trigger: CCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGGCCCAGGCTCGATCTaGACATCCAGAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLGPGSI*TSRGAS
Trigger: TGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCACTCCACCAGTACACTaGCTGCCGTGGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSTPPVH*LPWVRP
Trigger: TGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTCGGTATTTGGCGCCTaGTGGGCCCGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQSVFGA*WARAPW
Trigger: CCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCTCCTCTCCTCCGGCTaGTTCCACCAACTAATCCAG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWLLSSG*FHQLIQ
Trigger: CTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACTCTGCCCGTCGCACTaGGGCCTCTCCGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVLCPSH*GLSALV
Trigger: AACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTAGTAATGACATCCCCTaGCCGGAAGGGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSSNDIP*PEGQLC
Trigger: GCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHSQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGGAGGCCTGGGTCGATaGGCTGCTTGCCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLGGLGR*AACLIV
Trigger: GACTATGAGGCAAGCAGCCCATCGACCCAGGCCTCC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCGCTTGCTGGGTGGCTaGGCTGGTCCTAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDRLLGG*AGPKEA
Trigger: GGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGAGCTCCCGTCTCCTTTaGGCTTGGAACTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSSRLL*AWNSPQ
Trigger: CTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGGAGGTCAAGGTCTTTaGGGCCAGACCCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIGGQGL*GQTPGK
Trigger: CTTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGACTTGGGGCTGTTGTaGATGGACTCGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSDLGLL*MDSEWE
Trigger: CTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCCCTCTGGCGCAGCTaGGAGCAGGGAGACACTGTC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSALWRS*EQGDTV
Trigger: GACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCTTCCCACACTGCTTTaGCCCCCGCTACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHLPTLL*PPLLLP
Trigger: TGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGTAGGTACTGGGGCTaGCAGGTGGGCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSRYWG*QVGTLP
Trigger: GGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAAGCAAGGGGCGCTCTaGCCTCTGGGCTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDKQGAL*PLGLGA
Trigger: CGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGCTGGAGGGTCCTCGTaGGACCCTTTTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSAGGSS*DPFAIS
Trigger: AGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGCACATCTCGGTATTTaGCGCCTGCTGGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIAHLGI*RLLGPC
Trigger: GCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTCTGAGTTGCGGCCGTaGTCCACGAGGGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHSELRP*STREFT
Trigger: GGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGAAGGAGCAAGTCCTaGAACCCAGCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGRSKS*NPAPLP
Trigger: AGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCACCCCTCTCCCGTGTaGGGCCCAGTCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAHPSPV*GPVVQR
Trigger: CCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGAGAGTGGCTCCTTaGCTCTGCCCGTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGRVAP*LCPSHC
Trigger: GCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTGTTGCCCGGGAGAGTaGCTCCTTGGCTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLCCPGE*LLGSAR
Trigger: ACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGAGGCCCAGTTGTGTaGGCTGTGGAGTACACAAAC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGGPVV*AVEYTN
Trigger: GTTTGTGTACTCCACAGCCCACACAACTGGGCCTCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYRPPAR*GDGAPI
Trigger: TATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACCTGGGCCTGTGCAGTaGAAGCGAGGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIPGPVQ*KRGGGS
Trigger: GCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGACACAACTCCAAGCTaGTCCCCGGCCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSDTTPS*SPAGAR
Trigger: CCTTGCCCCGGCCGGGGACCAGCTTGGAGTTGTGTC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATGGAGGCCCAGTTGTGTaGGCTGAGCCCTCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHGGPVV*AEPSRR
Trigger: TCTCCTTGAGGGCTCAGCCCACACAACTGGGCCTCC...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580669.6
CDS-3UTR TCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCTGTGCCAGGAGGCTaGACTGCTCGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSPVPGG*TARFGC
Trigger: GCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAGTCCAGGGCAGATGTaGGCAGATCCAAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDSPGQM*ADPRGP
Trigger: CGGGCCCCTTGGATCTGCTCACATCTGCCCTGGACT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCACTGAGTTCAGGGCCTaGGCTGTGGGACAAATCGGC +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSTEFRA*AVGQIG
Trigger: GCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGCTCCTGGAGGCTCTTaGGTTCCAAGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQAPGGS*VPRGAG
Trigger: CCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTGGCCCCATTCTCCCTaGTGCTGTTGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHWPHSP*CCCQQP
Trigger: AGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCCAGGTCTTCGGGGCTaGCCACTGTCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYPGLRG*PLSQPS
Trigger: GCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAAACGGACCATTCCCTaGGCCCTCAAGGAGAATATC +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSKRTIP*ALKENI
Trigger: GATATTCTCCTTGAGGGCTCAGGGAATGGTCCGTTT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTCCTCCTCGTTCTCTaGCTCTCAGCCTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILLLVL*LSAWGV
Trigger: GACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCTCCTCCTCGTTCTCTaGCTCTCAGCCTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLLLLVL*LSAWGV
Trigger: GACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCGAGGTGGAGGAAGCTaGACTGAGGCACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWRGGGS*TEALSI
Trigger: TATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGACTGGCGAGGGTCATaGCAGGCCAGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIDWRGS*QASPSP
Trigger: GGGAGAGGGGCTGGCCTGGCATGACCCTCGCCAGTC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTAGCGATGCTTGGGGCTaGACTGCTAGGTTCACCCCC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSSDAWG*TARFTP
Trigger: GGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTTGAAGCTGCAGAGCTaGCGGAGGAGTATCAGCGAT +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWLKLQS*RRSISD
Trigger: ATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGGGCAGACAAGCCTCTaGTCCTTCAGGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLGQTSL*SFRVSS
Trigger: GGAACTGACCCTGAAGGAGCAGAGGCTTGTCTGCCC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGGAGCAGGCGCCCCTaGTCTGGCCTGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGSRRP*SGLESR
Trigger: CCTGCTCTCCAGGCCAGAGCAGGGGCGCCTGCTCCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTGCGCTTGTCTCAGCTaGAGTTCCAGCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWCACLS*SSSSSH
Trigger: ATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGCAGGCCCTGGCTCTTaGGAAGGGCTGAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQAGPGS*EGLSPS
Trigger: AGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAAGCCGAGCCTGTTCATaGTCCACCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYISRACS*STSSCC
Trigger: GCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCT...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATGGCTCCTCCCCGGCTaGCCTCTGGCGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKWLLPG*PLAQLG
Trigger: TCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGGGAGTGTGGTGAACTaGAGGGTGGCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAGSVVN*RVAARC
Trigger: GCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTAGGGCTTGCAGGGGGTaGTCCTGGAGGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSRACRG*SWRLLS
Trigger: ACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTCCTCTCCTCTGAGGTaGCCAGCACTGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQSSPLR*PALLPQ
Trigger: CTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACGCCCAGAGCCGTCCTaGCCTCTGGCCTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGRPEPS*PLASPV
Trigger: GACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCAGTGTCTGTGGGTCTaGCCGTCTGTCGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLQCLWV*PSVATP
Trigger: AGGGGTTGCGACAGACGGCCAGACCCACAGACACTG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGTCTGTCAGTGTCTGTaGGTCTGGCCGTCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSVCQCL*VWPSVA
Trigger: TGCGACAGACGGCCAGACCCACAGACACTGACAGAC...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATACCGACAGCTGCGCCTaGGTGAGGGTGCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDTDSCA*VRVRVC
Trigger: ACACACACGCACCCTCACCCAGGCGCAGCTGTCGGT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCACCGACAGCTGCGCCTaGGTGAGGGTGCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSTDSCA*VRVRVC
Trigger: ACACACACGCACCCTCACCCAGGCGCAGCTGTCGGT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGAGTATCAGCGATGCTTaGGGCTGCACTGCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSISDA*GCTARF
Trigger: GAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCTTGCTGGCCCAGGCTaGGCAGACAAGCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSLAGPG*ADKPLL
Trigger: GAGCAGAGGCTTGTCTGCCCAGCCTGGGCCAGCAAG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCAGGCGCCCCTGCTCTaGCCTGGAGAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFQAPLL*PGEQGP
Trigger: CGGGCCCTGCTCTCCAGGCCAGAGCAGGGGCGCCTG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGAGGCTCGGAAGACTTTaGGGTGCAGCGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQRLGRL*GAAPRG
Trigger: TCCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCT...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCGGAGTGGGAGGAGTTaGAGAGAGACTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSRSGRS*RETLPS
Trigger: AGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATCCCCGGCTGCCCTCTaGCGCAGCTGGGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKSPAAL*RSWEQG
Trigger: TCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACGTGCTAGGAAGACCTaGATCCTGGCTCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRARKT*ILAPPR
Trigger: CCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCGGAAGCTCTGCTTCTaGATTCTCATTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWRKLCF*ILIGTL
Trigger: GAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTCTCCAGCACGGCCTTaGGTGGCGCCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLSPARP*VAPQAP
Trigger: TGGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGA...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACGATGGACCCGCAGCTaGCTGGGCACCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKRWTRS*LGTTPA
Trigger: GGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCAGAGGGGCATCAGGTaGGCCTGCTGGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDQRGIR*ACWECG
Trigger: ACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGCAGGAGACTCGGGCTaGCAGGCTGGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGAGDSG*QAGRSQ
Trigger: CTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCTGGGAGCAAGGTGCTaGAGGGTCCTCGTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWALGARC*RVLVGP
Trigger: GGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGCCCCAGCCTCCTCCTaGGAGCAAGGTGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIAPASS*EQGAGG
Trigger: CCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGTATTTGGCGCCTGCTaGGCCCGTGCTCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAVFGAC*ARAPWV
Trigger: CACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATAC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCCTTCGGAGGCCCCCTaGGCCTTCCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDPSEAP*AFLQLL
Trigger: CAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGGCGTGGGTAGGGCTTaGGGCCTGAATTGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQGVGRA*GLNWPS
Trigger: CGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCAGTTGTGTGGGCTGTaGAGTACACAAACGGACCAT +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSQLCGL*STQTDH
Trigger: ATGGTCCGTTTGTGTACTCCACAGCCCACACAACTG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTGGGACTGGGAAGGGTaGCAGAAGGGACTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLWDWEG*QKGLAQ
Trigger: CTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIRPPAR*GDGAPI
Trigger: TATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTITTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCCGGCAGGGAAGGATaGAGCACGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPGREG*STTGAG
Trigger: CCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATCAGAGGGTGGGGGATaGAGTGGATCGGGTAACGGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYISEGGG*SGSGNG
Trigger: GCCGTTACCCGATCCACTCCATCCCCCACCCTCTGA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCGCACGTGGAGCCACTaGGGACCCTCCTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIRTWSH*GPSLPT
Trigger: GGTGGGCAAGGAGGGTCCCCAGTGGCTCCACGTGCG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR TCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGTCCCTGGTTGTATCTaGGTGTGTCAGTGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSVPGCI*VCQCRA
Trigger: TGCACGACACTGACACACTCAGATACAACCAGGGAC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGCTTCTCCCGTAGGCTaGGCCGAGCCTGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSASPVG*AEPVHA
Trigger: AGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGTCCAGGGCAGATGTaGGCAGATCCAAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWASPGQM*ADPRGP
Trigger: CGGGCCCCTTGGATCTGCTCACATCTGCCCTGGACT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCTCCTGGAGGCTCTTaGGTTCCAAGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAAPGGS*VPRGAG
Trigger: CCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTCCTGCTTGGCCAGTaGGGGAGCTGCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPLLLGQ*GSCGAR
Trigger: CCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTTGGCCCCATTCTCCCTaGTGCTGTTGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSWPHSP*CCCQQP
Trigger: AGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCA...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGTAGGGCTTGGGGCCTaGATTGGCCTTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIVGLGA*IGLRRP
Trigger: GGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTAC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCTGCAGTGCTTGGCCTaGGGACTCGGACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDLQCLA*GLGHLS
Trigger: AGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGGTCGATGGGCTGCTTaGCTCATAGTCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIGRWAA*LIVSAP
Trigger: AGGGGCTGAGACTATGAGGCAAGCAGCCCATCGACC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGGCTCTGCTCTCTGCTaGTGCTCTTTCGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIGSALC*CSFACW
Trigger: CCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATCCGGCTCTGCTCTCTaGTGCTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYISGSAL*CCSFAC
Trigger: GCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTCCGGCTCTGCTCTCTaGTGCTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLSGSAL*CCSFAC
Trigger: GCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGAGGCCACCGACAGCTaGGCCTGGGTGAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKEATDS*AWVRVR
Trigger: ACGCACCCTCACCCAGGCGCAGCTGTCGGTGGCCTC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGGGAGGGTTGTCAGTTaGTCCATGGTACTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLGRVVS*SMVLPR
Trigger: CCTTGGCAGTACCATGGAGCAACTGACAACCCTCCC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTGTCTCAGGGAAGCTaGTCTTCCTCAGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLSQGS*SSSASG
Trigger: ACCAGATGCTGAGGAAGAGCAGCTTCCCTGAGACAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTTCTCCCACTCCACCTaGTCCTTCTCTGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHFSHST*SFSVAL
Trigger: GAGAGCCACAGAGAAGGAGCAGGTGGAGTGGGAGAA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCAGCCTGGGCCTGCTaGAGTCTCCGGACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTISAWAC*SLRTSS
Trigger: GGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTGCTCGGTTTGGCTaGGGCACTGTTCTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHTARFG*GTVLRA
Trigger: AGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGT...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGCCAGGAGGCTGAACTaGTCGGTTTGGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYARRLN*SVWLRH
Trigger: GTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCAGGGAGACACTGTCTaGCTCCAGCTCCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSQGDTV*LQLLYL
Trigger: GAGGTAGAGGAGCTGGAGGCAGACAGTGTCTCCCTG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGCCCCCGCTACTGCTaGCACCCCCACCTACACTCA +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGPRYC*HPHLHS
Trigger: TGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATACGCTGTGGGCCAGCTaGTTGAGGACCACCAGACGG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYTLWAS*LRTTRR
Trigger: CCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGT...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGCCTGATAGGGTGTaGCAGGCCGTAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGPDRV*QAVSGR
Trigger: TCTGCCACTTACGGCCTGGCACACCCTATCAGGCCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAACTCCACCAGTACACTaGCTGCCGTGGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVTPPVH*LPWVRP
Trigger: TGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCACACCTGCAGCAGCTaGAGCTGGGACAACTCCACC +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQHTCSS*SWDNST
Trigger: GGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGGGCTTGCAGGGGGTaGTCCTGGAGGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRACRG*SWRLLS
Trigger: ACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTCCTCTCCTCTGAGGTaGCCAGCACTGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYSSPLR*PALLPQ
Trigger: CTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCGGTATTTGGCGCCTaGTGGGCCCGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTISVFGA*WARAPW
Trigger: CCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTATGAACCCCAAGCTCTaGTGTGTCCTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSMNPKL*CVLLLS
Trigger: GCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCAT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTTTCCTACAGTTGCTGTaGCCCAGGCCTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSFLQLL*PRPPHL
Trigger: GAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAA...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTTCCTACAGTTGCTGTaGCCCAGGCCTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLFLQLL*PRPPHL
Trigger: GAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATTCCTACAGTTGCTGTaGCCCAGGCCTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIFLQLL*PRPPHL
Trigger: GAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGCCCAGAGCCGTCCTaGCCTCTGGCCTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPRPEPS*PLASPV
Trigger: GACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCCTCAGCCACCATGTTaGAGGGAATGTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHPQPPC*RECSLS
Trigger: GGACAGGCTACATTCCCTGCAACATGGTGGCTGAGG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGAGTAATGACATCCCCTaGCCGGAAGGGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLSNDIP*PEGQLC
Trigger: GCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTGGCCTGCAGCTCCCTaGACTCCCGCTGCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIWPAAP*TPAARQ
Trigger: CTGCCTTGCAGCGGGAGTGCAGGGAGCTGCAGGCCA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGGAGGCCTGGGTCGATaGGCTGCTTGCCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQGGLGR*AACLIV
Trigger: GACTATGAGGCAAGCAGCCCATCGACCCAGGCCTCC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCAGTGTCTGTGGGTCTaGCCGTCTGTCGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDQCLWV*PSVATP
Trigger: AGGGGTTGCGACAGACGGCCAGACCCACAGACACTG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGGGTCCCCAGGCCGTaGGAGGGTTGTCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARVPRP*EGCQLL
Trigger: GAGCAACTGACAACCCTCCCACGGCCTGGGGACCCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTCCAGCTATGCCAGGTaGGCAGTGCCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSSSYAR*AVPMAP
Trigger: TGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGA...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGGAGCGTCTCCCGCTaGTTGCGCAGCGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGSVSR*LRSAIC
Trigger: GCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAAGTAGGTACTGGGGCTaGCAGGTGGGCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVSRYWG*QVGTLP
Trigger: GGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAATCAGGTGGGCCTGCTaGGAGTGTGGTGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIIRWAC*ECGELQ
Trigger: CTGCAGTTCACCACACTCCCAGCAGGCCCACCTGAT...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAGCATCGATGGTGACTaGGAGCCAACTGATGATCAA +
Preference number: 4 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSSIDGD*EPTDDQ
Trigger: TTGATCATCAGTTGGCTCCCAGTCACCATCGATGCT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATGCAGGGGGTGCTCCTaGAGGCTCTTGAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYICRGCS*RLLSSK
Trigger: CTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTGGGCCCGTGCTCCCTaGGTGGAGCTGGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFWARAP*VELEAG
Trigger: TCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCACATCTCGGTATTTaGCGCCTGCTGGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAAHLGI*RLLGPC
Trigger: GCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSPATCF*KEQVLE
Trigger: TTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGCAGTCTCCAGCCCTaGAGGACTCAGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGSLQP*RTQETR
Trigger: CCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAGGCAGTCTCCAGCCCTaGAGGACTCAGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVGSLQP*RTQETR
Trigger: CCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCC...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTGTTGCCCGGGAGAGTaGCTCCTTGGCTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWACCPGE*LLGSAR
Trigger: ACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTGTTGCCCGGGAGAGTaGCTCCTTGGCTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYCCPGE*LLGSAR
Trigger: ACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLLQEVG*NQAPLS
Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCTGGGGACCCTTGTGTaGTGCAGCCCCAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLLGTLV*CSPSHV
Trigger: AACATGACTGGGGCTGCACCACACAAGGGTCCCCAG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARTRGS*VQSWLS
Trigger: ACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTGGGACTGGGAAGGGTaGCAGAAGGGACTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQWDWEG*QKGLAQ
Trigger: CTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCCGGCAGGGAAGGATaGAGCACGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPGREG*STTGAG
Trigger: CCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTCACCCCTCAGAGGGTaGGGGATGGAGTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWASPLRG*GMEWIG
Trigger: CCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCACCATTCCACACCCCTaGAGACCAAGGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLTIPHP*RPRSRW
Trigger: CCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATGGCTGTGGCAGTATGTaGTGCTGTCCCTGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHGCGSM*CCPWLY
Trigger: ATACAACCAGGGACAGCATCACATACTGCCACAGCC...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTCTTCCGCTTCTTGCTaGGCTCCGATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLSSASC*APIPAA
Trigger: AGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCTCTTGCGAAGGGCTaGGTCCCTCTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAALAKG*VPLLCH
Trigger: GTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCTTCTCCCGTAGGCTaGGCCGAGCCTGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAASPVG*AEPVHA
Trigger: AGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAACTGAGTTCAGGGCCTaGGCTGTGGGACAAATCGGC +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVTEFRA*AVGQIG
Trigger: GCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTGGGCCAGCTGCTTaGGGACCACCAGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRCGPAA*GPPDGG
Trigger: CCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGAGATGGCATAGCCTGTaGCCCGGACACCGTTGGATG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQRWHSL*PGHRWM
Trigger: CATCCAACGGTGTCCGGGTCACAGGCTATGCCATCT...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATACTGCCTGCCGTGGGTaGGGCCACCTCCATGATCTT +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYTACRG*GHLHDL
Trigger: AAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGT...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGCTCCTGGAGGCTCTTaGGTTCCAAGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIAPGGS*VPRGAG
Trigger: CCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGCTGTCCTCTCCTCTaGGGTGCCCAGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGCPLL*GAQHCC
Trigger: GCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGGGGCCCATTGTTGCTaGGAAGTCGGCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDGAHCC*EVGCSV
Trigger: AACACTGCAGCCGACTTCTCAGCAACAATGGGCCCC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGGCCCATTGTTGCTaGGAAGTCGGCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGAHCC*EVGCSV
Trigger: AACACTGCAGCCGACTTCTCAGCAACAATGGGCCCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGAGCCACAAAGATCCTaGCGGGTAGGTGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLEPQRS*RVGAGK
Trigger: CTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCGAGGTGGAGGAAGCTaGACTGAGGCACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRGGGS*TEALSI
Trigger: TATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCTGGGTCGATGGGCTaGTTGCCTCATAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSPGSMG*LPHSLS
Trigger: GCTGAGACTATGAGGCAAGCAGCCCATCGACCCAGG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCCTGGAGTCCAGCTATaGCAGGTGGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAPGVQL*QVGSAH
Trigger: ATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGGTCCAGAGCTGGATaGTTGCTGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGSRAG*LLAQAG
Trigger: CCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGGATGGCACAGCGCTaGCGCAGCTCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRMAQR*RSSPRA
Trigger: GGCCCTGGGGGAGCTGCGGCAGCGCTGTGCCATCCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATTGCGCAGCGCGATCTaGCTCTGCAGCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLRSAI*LCSRST
Trigger: GGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTGCGCTTGTCTCAGCTaGAGTTCCAGCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHCACLS*SSSSSH
Trigger: ATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATCAGCCTGGGCCTGCTaGAGTCTCCGGACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSAWAC*SLRTSS
Trigger: GGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGTTGGAGAGAGACTCTaGCTTCTTGGCTGTCCTTCG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLVGERL*LLGCPS
Trigger: CGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAAC...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCCCCCGCTACTGCTaGCACCCCCACCTACACTCA +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGPRYC*HPHLHS
Trigger: TGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGGAGTGTGGTGAACTaGAGGGTGGCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGSVVN*RVAARC
Trigger: GCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGGGCTTGCAGGGGGTaGTCCTGGAGGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARACRG*SWRLLS
Trigger: ACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTTCTTGCTACAGAACTaGTGGAGGGGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLFLLQN*WRGSSR
Trigger: CCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTCCTCTCCTCCGGCTaGTTCCACCAACTAATCCAG +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILLSSG*FHQLIQ
Trigger: CTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGGCCTTCCTACAGTTaGTGTGCCCCAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGPSYS*CAPGLP
Trigger: GGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGTGGCTCCTTGGCTCTaGCCGTCGCACTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFVAPWL*PSHCGL
Trigger: GAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCAC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACGCCCAGAGCCGTCCTaGCCTCTGGCCTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRPEPS*PLASPV
Trigger: GACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCGCTTGCTGGGTGGCTaGGCTGGTCCTAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLRLLGG*AGPKEA
Trigger: GGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTGCTCTTTCGCTTGCTaGGTGGCTGGGCTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQCSFAC*VAGLVL
Trigger: TAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGGGGTGATCCCCAGTaGTCCGCTGTGGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGGDPQ*SAVVLY
Trigger: ATAAAGGACCACAGCGGACCACTGGGGATCACCCCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGAGGCGCCAGGGCTGCTaGAGCTGGAGCCAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLRRQGC*SWSQGY
Trigger: ATACCCCTGGCTCCAGCTCCAGCAGCCCTGGCGCCT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTTCACCCCCTCGACCTaGAGTCCAGCTATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQFTPST*SPAMPG
Trigger: ACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGGGAGCGTCTCCCGCTaGTTGCGCAGCGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRGSVSR*LRSAIC
Trigger: GCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCAGGCGCCCCTGCTCTaGCCTGGAGAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSQAPLL*PGEQGP
Trigger: CGGGCCCTGCTCTCCAGGCCAGAGCAGGGGCGCCTG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCCTTCATGTTCCCTCTaGGCTTCAGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYPSCSL*ASAWAC
Trigger: GCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGAGGTCAAGGTCTTTaGGGCCAGACCCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGGQGL*GQTPGK
Trigger: CTTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATGGGGCTGTTGTGGATaGACTCGGAGTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVWGCCG*TRSGRS
Trigger: ACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGCCCTCTGGCGCAGCTaGGAGCAGGGAGACACTGTC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGALWRS*EQGDTV
Trigger: GACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGACCTGGATCCTaGCTCCTCCCCGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGRPGS*LLPGCP
Trigger: AGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCACGCTCTACAAAATTaGAAGGGACCAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLHALQN*KGPGPF
Trigger: GAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATCAGGGCCTGAGCTGTaGGACAAATCGGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVSGPEL*DKSASS
Trigger: AGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGCCAGCACCACGCTGTaGGCCAGCTGCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLASTTL*ASCLRT
Trigger: GGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGCCAGCACCACGCTGTaGGCCAGCTGCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGASTTL*ASCLRT
Trigger: GGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCGATGGACCCGCAGCTaGCTGGGCACCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQRWTRS*LGTTPA
Trigger: GGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGAGCATCGATGGTGACTaGGAGCCAACTGATGATCAA +
Preference number: 4 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSIDGD*EPTDDQ
Trigger: TTGATCATCAGTTGGCTCCCAGTCACCATCGATGCT...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCCGCCGACTCCCCGTaGGGCGACATGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSADSP*GDMVRT
Trigger: CGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTCCGCCGACTCCCCGTaGGGCGACATGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSADSP*GDMVRT
Trigger: CGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAAGCAAGGGGCGCTCTaGCCTCTGGGCTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGKQGAL*PLGLGA
Trigger: CGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGGCCCGTGCTCCCTaGGTGGAGCTGGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWARAP*VELEAG
Trigger: TCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGTCGTCCAGAGGCCTaGGGCCCATTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSSRPEA*GPLLLR
Trigger: TCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCACCCCTCTCCCGTGTaGGGCCCAGTCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRHPSPV*GPVVQR
Trigger: CCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGGAGAGTGGCTCCTTaGCTCTGCCCGTCGCACTGC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGRVAP*LCPSHC
Trigger: GCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTGGGACTGGGAAGGGTaGCAGAAGGGACTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAWDWEG*QKGLAQ
Trigger: CTGCGCTAGTCCCTTCTGCCACCCTTCCCAGTCCCA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFTTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCCGGCAGGGAAGGATaGAGCACGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPGREG*STTGAG
Trigger: CCCTGCCCCCGTCGTGCTCCATCCTTCCCTGCCGGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTCAGAGGGTGGGGGATaGAGTGGATCGGGTAACGGC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWASEGGG*SGSGNG
Trigger: GCCGTTACCCGATCCACTCCATCCCCCACCCTCTGA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGCTCTTGCGAAGGGCTaGGTCCCTCTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIALAKG*VPLLCH
Trigger: GTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCTGCTGGGAGTGTGGTaGACTGCAGGGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFLLGVW*TAGWQP
Trigger: GGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTGCTGGGAGTGTGGTaGACTGCAGGGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLLGVW*TAGWQP
Trigger: GGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCACTGCCTGCCGTGGGTaGGGCCACCTCCATGATCTT +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTITACRG*GHLHDL
Trigger: AAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGT...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTCCTGCTTGGCCAGTaGGGGAGCTGCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLLLGQ*GSCGAR
Trigger: CCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGAGCCACAAAGATCCTaGCGGGTAGGTGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDEPQRS*RVGAGK
Trigger: CTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCGAGGTGGAGGAAGCTaGACTGAGGCACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSRGGGS*TEALSI
Trigger: TATACTCAGTGCCTCAGTTCAGCTTCCTCCACCTCG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTCTGCTCTCTGCTGCTaGTCTTTCGCTTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSSALCC*SFACWV
Trigger: CACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGA...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTGTGGGTGTCTGTATTaGAGGGCTGTGGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHCGCLY*RAVAVC
Trigger: ACATACTGCCACAGCCCTGCAATACAGACACCCACA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTGTGTGTCACTGTCTaGCCATTTCAGAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLLCVTV*PFQSCQ
Trigger: CTGGCAACTCTGAAATGGGCAGACAGTGACACACAG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTTTGAAGCTGCAGAGCTaGCGGAGGAGTATCAGCGAT +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSLKLQS*RRSISD
Trigger: ATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAA...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAGGATGGCACAGCGCTaGCGCAGCTCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRMAQR*RSSPRA
Trigger: GGCCCTGGGGGAGCTGCGGCAGCGCTGTGCCATCCT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGAGCGCGATCTGCCTCTaGAGCCGCAGCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSAICL*SRSTSR
Trigger: GCGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCGCT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTGCTCCACCTCCAGCTaGTGCCGCCGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSCSTSS*CRRWAT
Trigger: GGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAACTGCTCGGTTTGGCTaGGGCACTGTTCTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVTARFG*GTVLRA
Trigger: AGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGCTCCTTCCCACACTaGTTTGGCCCCCGCTACTGC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGSFPH*FGPRYC
Trigger: GCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTCCTGGGAGCAAGGTaGTGGAGGGTCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLLGAR*WRVLVG
Trigger: TCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCGGACAGGCCTCTCCTaGAGTCCACTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFRTGLS*SPLGLL
Trigger: CAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAATGAACCCCAAGCTCTaGTGTGTCCTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIMNPKL*CVLLLS
Trigger: GCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCAT...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTGTTGCCAGCAACCTaGTTCTGGAAGGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILLPAT*FWKEQV
Trigger: GACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCTGTTGCCAGCAACCTaGTTCTGGAAGGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLLLPAT*FWKEQV
Trigger: GACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGCAGCTCCAGGATCTaGTCCAAGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGSSRI*SKISSS
Trigger: CGATGAGGAGATCTTGGAGCAGATCCTGGAGCTGCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTTCTTGCTACAGAACTaGTGGAGGGGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDFLLQN*WRGSSR
Trigger: CCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCCCGCTGGAGCAGTTaGTGTCTCCCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPRWSS*CLPAGL
Trigger: CAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCAATCCTGGGGGCGCTaGCAGAGCTGGGGGTACAAG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLQSWGR*QSWGYK
Trigger: CTTGTACCCCCAGCTCTGGCAGCGCCCCCAGGATTG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYISLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLSLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGTCCTTGGCCAGCAGTaGACTGGCTGTCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYVLGQQ*TGCLTE
Trigger: CTCAGTGAGACAGCCAGTGCACTGCTGGCCAAGGAC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAGGCGCCAGGGCTGCTaGAGCTGGAGCCAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFRRQGC*SWSQGY
Trigger: ATACCCCTGGCTCCAGCTCCAGCAGCCCTGGCGCCT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCGCTCCATCCAAGGTTaGCTGAGCTCTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIRSIQG*LSSSPP
Trigger: GGGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGAGGGTCCCCAGGCCGTaGGAGGGTTGTCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLRVPRP*EGCQLL
Trigger: GAGCAACTGACAACCCTCCCACGGCCTGGGGACCCT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTTGCTGGCCCAGGCTaGGCAGACAAGCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLAGPG*ADKPLL
Trigger: GAGCAGAGGCTTGTCTGCCCAGCCTGGGCCAGCAAG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATCATCCTCTGGCCTCTaGCAGGCGGGTCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSSSGL*QAGPEL
Trigger: CAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTTGTCCGCATCCTCCTaGGGCGTGGCCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQLSASS*GVASPG
Trigger: CCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATTGTCCGCATCCTCCTaGGGCGTGGCCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTLSASS*GVASPG
Trigger: CCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGTCACCCCCAGGAGCTaGCCCCTCAGCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRVTPRS*PLSSAF
Trigger: GAATGCGGAGCTGAGGGGCCAGCTCCTGGGGGTGAC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTCTGGGCTTCAGCCTaGGCCTGCTGCAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPLWASA*ACCSLR
Trigger: CCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGGAAGACCTGGATCCTaGCTCCTCCCCGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFGRPGS*LLPGCP
Trigger: AGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTGGCCCAGTAGGTACTaGGGCTGGCAGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLWPSRY*GWQVGT
Trigger: AGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCA...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATGGCCCAGTAGGTACTaGGGCTGGCAGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKWPSRY*GWQVGT
Trigger: AGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCAGGGCCCTTGGGGTaGGAGCTGAGCCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPGPLG*ELSLHL
Trigger: CAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCAGAGGGGCATCAGGTaGGCCTGCTGGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLQRGIR*ACWECG
Trigger: ACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATGCAGCAGCTGCAGCTaGGACAACTCCACCAGTACA +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVCSSCS*DNSTST
Trigger: TGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTGCAGCAGCTGCAGCTaGGACAACTCCACCAGTACA +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQCSSCS*DNSTST
Trigger: TGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCCCGTGGGGCGACATaGTGCGCACGACCACCTCAC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPRGAT*CARPPH
Trigger: GTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTCCGCCGACTCCCCGTaGGGCGACATGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSSADSP*GDMVRT
Trigger: CGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAAGCAAGGGGCGCTCTaGCCTCTGGGCTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFKQGAL*PLGLGA
Trigger: CGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGCTGGAGGGTCCTCGTaGGACCCTTTTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAAGGSS*DPFAIS
Trigger: AGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCACTCGGCCTCCTGCTTaGCCAGTGAGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRTRPPA*PVRELR
Trigger: CCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCCTGGGTCTCCTCCTTaGCACATCTCGGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDPGSPP*HISVFG
Trigger: GCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCTCCAGCATCAGGATTaGGCGACATTGACACGGGGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSLQHQD*ATLTRG
Trigger: ACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCGACTCAGCTTTCTTaGAGCGGCGGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPTQLS*SGGAWE
Trigger: CTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCAAATGCAGCCACCATaGAGTGGGGAGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: REDRIRTARAIRGHRLLSQMQPP*SGELSG
Trigger: ACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCAAATGCAGCCACCATaGAGTGGGGAGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLQMQPP*SGELSG
Trigger: ACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCCTCCACGTCCATATTaGGGGAACTCTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAPPRPY*GNSPGG
Trigger: ACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSLQEVG*NQAPLS
Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTTCTCGCTTCTGCCCTaGGGCTCCCCACGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAFSLLP*GSPRSI
Trigger: GATTGAACGTGGGGAGCCCCAGGGCAGAAGCGAGAA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACTCCAGGGCCCGTCCTaGGACTGGGAAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTLQGPS*DWEGWQ
Trigger: CTGCCACCCTTCCCAGTCCCAGGACGGGCCCTGGAG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCGCCCGCCTGCCCGCTaGGGAGATGGGGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQRPPAR*GDGAPI
Trigger: TATTGGAGCCCCATCTCCCCAGCGGGCAGGCGGGCG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACCTGGGCCTGTGCAGTaGAAGCGAGGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKPGPVQ*KRGGGS
Trigger: GCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGWGPL*LGLSPS
Trigger: GGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTGGCCCCAGGGTCTTTaGGGGCGGGACCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPWPQGL*GRDLTG
Trigger: CCCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCGCTTTCGGCCCCGCTaGCCCCAGGGTCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRFRPR*PQGLWG
Trigger: CCCCCAAAGACCCTGGGGCCAGCGGGGCCGAAAGCG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATCACCCCTCAGAGGGTaGGGGATGGAGTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSPLRG*GMEWIG
Trigger: CCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTAGACCAAGGTCAAGGTaGGGGTTCAGTCAAACTATC +
Preference number: 4 (lower is better)
Translates to: GPLRASSACRMGHSFTPSRPRSR*GFSQTI
Trigger: GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATTCGAGGGACCCCAGTaGGAGTGGCAGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTFEGPQ*EWQGQA
Trigger: AGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCTCAGGTGTAGGGCATaGCTTGGGGCTGTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWALRCRA*LGAVVD
Trigger: ATCCACAACAGCCCCAAGTCATGCCCTACACCTGAG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCTCAGGTGTAGGGCATaGCTTGGGGCTGTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYLRCRA*LGAVVD
Trigger: ATCCACAACAGCCCCAAGTCATGCCCTACACCTGAG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGTGATGGGCTCAGACTaGGCTCGTCCCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGVMGSD*ARPLHP
Trigger: AGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCAC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATGTGGGCCAGCTGCTTaGGGACCACCAGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEECGPAA*GPPDGG
Trigger: CCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGCCTGGACAGAAATGTaGAGGGGCCCGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQAWTEM*RGPAHR
Trigger: CCTGTGGGCCGGGCCCCTTCACATTTCTGTCCAGGC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGGCTGTCCTCTCCTCTaGGGTGCCCAGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTGCPLL*GAQHCC
Trigger: GCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAAGAACAGCCTGCCCCTaGCTTCTCCTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKRTACP*LLLLLV
Trigger: GACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCT...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAACACCTTCAGGATCTaGCCCTCTCGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWANTFRI*PSRKGS
Trigger: GCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATA +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLPVLAQ*PWSSYI
Trigger: TATGTAACTTGACCAAGGTCACTGAGCCAGGACTGG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCACTGGCTGTCTCACTaGGGTCCCGGGCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLHWLSH*GPGLAG
Trigger: GCCAGCGAGCCCGGGACCTCAGTGAGACAGCCAGTG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR TCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCCCAGTTGTGTGGGCTaGGCCCTCAAGGAGAATATC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYPSCVG*ALKENI
Trigger: GATATTCTCCTTGAGGGCTCAGCCCACACAACTGGG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGGGGTAGGGAGGATGTaGAGAGGCCACCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRGVGRM*RGHRQL
Trigger: CAGCTGTCGGTGGCCTCTGCACATCCTCCCTACCCC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCACCCACAAAGGAGGCTaGAGAAGGCGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRTHKGG*RRRQGC
Trigger: GCAGCCCTGGCGCCTTCTGCAGCCTCCTTTGTGGGT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAATGTGCTTCAGCACTTaGTCCAGGCTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVMCFST*SRLSSL
Trigger: CAAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACAT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGTAGACTCCAGCAGCTaGACGGCTCCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYVDSSS*TAPSCS
Trigger: GGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTAC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGTAGACTCCAGCAGCTaGACGGCTCCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAVDSSS*TAPSCS
Trigger: GGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTAC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATGGCATGGGCCAAGTTaGTATTGCCGGGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGWHGPS*YCRAPR
Trigger: CCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGCATCAGGTGGGCCTaGTGGGAGTGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGIRWA*WECGEL
Trigger: CAGTTCACCACACTCCCAGCAGGCCCACCTGATGCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCATCAGGTGGGCCTaGTGGGAGTGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGIRWA*WECGEL
Trigger: CAGTTCACCACACTCCCAGCAGGCCCACCTGATGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCCCAGGCTCGATCTaGACATCCAGAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGPGSI*TSRGAS
Trigger: TGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACGTGGGGCGACATGGTaGGCACGACCACCTCACGAC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRGATW*ARPPHD
Trigger: GTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTCCTGGGAGCAAGGTaGTGGAGGGTCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPLLGAR*WRVLVG
Trigger: TCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTCCTCTCCTCTGAGGTaGCCAGCACTGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPSSPLR*PALLPQ
Trigger: CTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCGGTATTTGGCGCCTaGTGGGCCCGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSVFGA*WARAPW
Trigger: CCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCTGACAGGTCTGAGTTaGGGCCGTGGTCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFLTGLS*GRGPRG
Trigger: CCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTGTTGCCAGCAACCTaGTTCTGGAAGGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQLLPAT*FWKEQV
Trigger: GACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAG...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGGCAGCTCCAGGATCTaGTCCAAGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYGSSRI*SKISSS
Trigger: CGATGAGGAGATCTTGGAGCAGATCCTGGAGCTGCC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGGGCCTCTTCTGCCTaGAGGATGGGCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGRASSA*RMGHSF
Trigger: GAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCTGCAAGGCAGCAATCTaGTTGTCCTTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSCKAAI*LSLASS
Trigger: ACTGCTGGCCAAGGACAAGCAGATTGCTGCCTTGCA...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTGCTGGCCTCTGCTCTaGGGACTGCAGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFCWPLL*GLQGSL
Trigger: AAGGGACCCCTGCAGTCCCCAGAGCAGAGGCCAGCA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATTGTGTGTGTGTGTGTaGGTGTCTGTATTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILCVCV*VSVLQG
Trigger: GCCCTGCAATACAGACACCCACACACACACACACAA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACATCACCCAGCCAGGTaGGGGGACTGGCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTHHPAR*GDWRGS
Trigger: TGACCCTCGCCAGTCCCCCCACCTGGCTGGGTGATG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCATCACCCAGCCAGGTaGGGGGACTGGCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQHHPAR*GDWRGS
Trigger: TGACCCTCGCCAGTCCCCCCACCTGGCTGGGTGATG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGCTCCCGTCTCCTTTaGGCTTGGAACTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWASSRLL*AWNSPQ
Trigger: CTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGAGCTGGATGCTTGCTaGCCCAGGCTGGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLELDAC*PRLGRQ
Trigger: TTGTCTGCCCAGCCTGGGCCAGCAAGCATCCAGCTC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCACTTCCTCATCCTCTaGCCTCTGGCAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFHFLIL*PLAGGS
Trigger: GGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGCTCATATTCAGCTTaGCCTTCAGGAAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSSYSA*PSGKPP
Trigger: TGGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGTCACCCCCAGGAGCTaGCCCCTCAGCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTVTPRS*PLSSAF
Trigger: GAATGCGGAGCTGAGGGGCCAGCTCCTGGGGGTGAC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTTGCTCTGCAGGCCCTaGCTCTTGCGAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLLCRP*LLRRAE
Trigger: CTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAA...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTGGATGGACTCGGAGTaGGAGGAGTTGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYWMDSE*EELERD
Trigger: GTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTGGATGGACTCGGAGTaGGAGGAGTTGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAWMDSE*EELERD
Trigger: GTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAAGCAACAGCGCAGTaGGTCAGAGCTGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPQATAQ*VRAAPA
Trigger: AGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGCCCAGTAGGTACTaGGGCTGGCAGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRWPSRY*GWQVGT
Trigger: AGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCAGGGCCCTTGGGGTaGGAGCTGAGCCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPGPLG*ELSLHL
Trigger: CAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGAGGGGCATCAGGTaGGCCTGCTGGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPQRGIR*ACWECG
Trigger: ACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCTTTTGCCATCTCTCTaGAAGGGCTTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYLLPSL*KGLQGV
Trigger: CACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAACTCGGCCTCCTGCTTaGCCAGTGAGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTTRPPA*PVRELR
Trigger: CCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGGAAGGAGCAAGTCCTaGAACCCAGCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAGRSKS*NPAPLP
Trigger: AGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSPATCF*KEQVLE
Trigger: TTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGCTTGGGGCCTGAATTaGCCTTCGGAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTAWGLN*PSEAPW
Trigger: CCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCGGACACCTCTCTTCTaGGGGCCCCTCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRTPLF*GPLRPE
Trigger: CTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCAAGGAGAATATCTaGGGACAAATAACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLLKENI*GQITPL
Trigger: CAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCAAATGCAGCCACCATaGAGTGGGGAGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDQMQPP*SGELSG
Trigger: ACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWALQEVG*NQAPLS
Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAG...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSQPGVS*VPCPGR
Trigger: GCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACCCACCTGGGGGCCCTaGGGACCCTTGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEPTWGP*GPLCGA
Trigger: TGCACCACACAAGGGTCCCCAGGGCCCCCAGGTGGG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGGGCGCTGCCAGAGCTaGGGGTACAAGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLGRCQS*GYKAHL
Trigger: CAGGTGGGCCTTGTACCCCCAGCTCTGGCAGCGCCC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCCTGGGCCTGTGCAGTaGAAGCGAGGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFPGPVQ*KRGGGS
Trigger: GCTTCCTCCACCTCGCTTCCACTGCACAGGCCCAGG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGGTGGGGCCCACTTTaGCTTGGCCTTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGWGPL*LGLSPS
Trigger: GGAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAACGACGGGGGCAGGGTaGGGCCCACTTTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEETTGAG*GPLWLG
Trigger: GCCAAGCCAAAGTGGGCCCCACCCTGCCCCCGTCGT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATCAGAGGGTGGGGGATaGAGTGGATCGGGTAACGGC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSEGGG*SGSGNG
Trigger: GCCGTTACCCGATCCACTCCATCCCCCACCCTCTGA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGTCCCTGGTTGTATCTaGGTGTGTCAGTGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAVPGCI*VCQCRA
Trigger: TGCACGACACTGACACACTCAGATACAACCAGGGAC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCAGGCGCTTGGCAATaGCCGCCAGCTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPGAWQ*PPARRS
Trigger: AGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGCCTGGACAGAAATGTaGAGGGGCCCGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSAWTEM*RGPAHR
Trigger: CCTGTGGGCCGGGCCCCTTCACATTTCTGTCCAGGC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCAGGTCTTCGGGGCTaGCCACTGTCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPGLRG*PLSQPS
Trigger: GCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGTAGGGCTTGGGGCCTaGATTGGCCTTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSVGLGA*IGLRRP
Trigger: GGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTAC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGTAGGGCTTGGGGCCTaGATTGGCCTTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEVGLGA*IGLRRP
Trigger: GGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTAC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATA +
Preference number: 4 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVPVLAQ*PWSSYI
Trigger: TATGTAACTTGACCAAGGTCACTGAGCCAGGACTGG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATA +
Preference number: 4 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSPVLAQ*PWSSYI
Trigger: TATGTAACTTGACCAAGGTCACTGAGCCAGGACTGG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGTCGATGGGCTGCTTaGCTCATAGTCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGRWAA*LIVSAP
Trigger: AGGGGCTGAGACTATGAGGCAAGCAGCCCATCGACC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTGCTCTTTCGCTTaGTGGGTGGCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRCCSFA*WVAGLV
Trigger: GACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCTCTGCTCTCTGCTaGTGCTCTTTCGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGSALC*CSFACW
Trigger: CCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTGTTGGGAAGATGGGTaGCCCCACTTCTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWACWEDG*PHFCVL
Trigger: CAACACACAGAAGTGGGGGCACCCATCTTCCCAACA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATCCCCTCTGAGCTCTTaGTTCACCGACGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKSPLSS*FTDAPS
Trigger: GGATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGTTGCTCCATGGTACTaGCAAGGGGCCCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFVAPWY*QGAPEP
Trigger: GGGTTCTGGGGCCCCTTGGCAGTACCATGGAGCAAC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCTGGAGTCCAGCTATaGCAGGTGGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPGVQL*QVGSAH
Trigger: ATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGCGTCTCCCGCTGGTTaGGCAGCGCGATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEASPAG*AARSAS
Trigger: AGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTTTTTCCGGGCTTCCTaGTCCAGGCTCTCGCATTTC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAFFRAS*SRLSHF
Trigger: GAAATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCTCACATCGCCTCTaGTTTTTCCGGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTISSHRL*FFRASC
Trigger: GCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCTCCGGACCTCCTCCTaGTTCTCCCGTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQLRTSS*FSRRLS
Trigger: GCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACTCCGGACCTCCTCCTaGTTCTCCCGTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTLRTSS*FSRRLS
Trigger: GCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCGTTGGAGAGAGACTCTaGCTTCTTGGCTGTCCTTCG +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAVGERL*LLGCPS
Trigger: CGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAAC...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGGCTCCTTCCCACACTaGTTTGGCCCCCGCTACTGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTGSFPH*FGPRYC
Trigger: GCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGCATGGGCCAAGTTaGTATTGCCGGGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRWHGPS*YCRAPR
Trigger: CCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCACTCCACCAGTACACTaGCTGCCGTGGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRTPPVH*LPWVRP
Trigger: TGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCACACCTGCAGCAGCTaGAGCTGGGACAACTCCACC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRHTCSS*SWDNST
Trigger: GGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGTCCACTCGGCCTCCTaGTTGGCCAGTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQVHSAS*LASEGA
Trigger: AGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGAC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCATGAACCCCAAGCTCTaGTGTGTCCTCCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWAMNPKL*CVLLLS
Trigger: GCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCAT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTTCTTGCTACAGAACTaGTGGAGGGGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIFLLQN*WRGSSR
Trigger: CCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGGGCCTTCCTACAGTTaGTGTGCCCCAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLGPSYS*CAPGLP
Trigger: GGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCCTCAGCCACCATGTTaGAGGGAATGTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIPQPPC*RECSLS
Trigger: GGACAGGCTACATTCCCTGCAACATGGTGGCTGAGG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCCCGCTGGAGCAGTTaGTGTCTCCCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPRWSS*CLPAGL
Trigger: CAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCACACCTTCTCGCTTCTaGCCTGGGGCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRTPSRF*PGAPHV
Trigger: AACGTGGGGAGCCCCAGGGCAGAAGCGAGAAGGTGT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGCTGGCCTCTGCTCTaGGGACTGCAGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTCWPLL*GLQGSL
Trigger: AAGGGACCCCTGCAGTCCCCAGAGCAGAGGCCAGCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCCAGTGGTCCGCTGTaGTCCTTTATCTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPSGPL*SFISGS
Trigger: AGAGCCGGAGATAAAGGACCACAGCGGACCACTGGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCCCAGTGGTCCGCTGTaGTCCTTTATCTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLPSGPL*SFISGS
Trigger: AGAGCCGGAGATAAAGGACCACAGCGGACCACTGGG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGTGTGCGCGAGTATGTaGAGGAGCGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRVCASM*RSEGVP
Trigger: AGGGACACCCTCGCTCCTCCACATACTCGCGCACAC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTTGTCAGTTGCTCCATaGTACTGCCAAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTILSVAP*YCQGAP
Trigger: TGGGGCCCCTTGGCAGTACCATGGAGCAACTGACAA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTGCAGGCGGAAAGCCTaGAGTTCCTGTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFCRRKA*SSCARR
Trigger: CCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGACTTGGGGCTGTTGTaGATGGACTCGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLDLGLL*MDSEWE
Trigger: CTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGCTCCTCTACCTCACTaGCTGTGTCCACCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLAPLPH*LCPPQV
Trigger: CACCTGAGGTGGACACAGCCAGTGAGGTAGAGGAGC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGCTCCTCTACCTCACTaGCTGTGTCCACCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGAPLPH*LCPPQV
Trigger: CACCTGAGGTGGACACAGCCAGTGAGGTAGAGGAGC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCAAGCAACAGCGCAGTaGGTCAGAGCTGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQQATAQ*VRAAPA
Trigger: AGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGTAAGTGGCAGAAGGTaGCCCAGTAGGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKVSGRR*PSRYWG
Trigger: GCCCCAGTACCTACTGGGCCACCTTCTGCCACTTAC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGTAAGTGGCAGAAGGTaGCCCAGTAGGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLVSGRR*PSRYWG
Trigger: GCCCCAGTACCTACTGGGCCACCTTCTGCCACTTAC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATGCAGGGGGTGCTCCTaGAGGCTCTTGAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGCRGCS*RLLSSK
Trigger: CTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCTGGGAGCAAGGTGCTaGAGGGTCCTCGTGGGACCC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLGARC*RVLVGP
Trigger: GGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTACTCGGCCTCCTGCTTaGCCAGTGAGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSTRPPA*PVRELR
Trigger: CCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGCACATCTCGGTATTTaGCGCCTGCTGGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTAHLGI*RLLGPC
Trigger: GCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCCTGGGTCTCCTCCTTaGCACATCTCGGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIPGSPP*HISVFG
Trigger: GCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTCTTCCTCTTCCTCCTaGATGTCTGACAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQSSSSS*MSDRSE
Trigger: CTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTTGCTACAGAACTGCTaGAGGGGCAGCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTILLQNC*RGSSRI
Trigger: GATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGGCAGTCTCCAGCCCTaGAGGACTCAGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRGSLQP*RTQETR
Trigger: CCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGTGTTCTCGGGGATCTaGAGGCCGCCTGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSVFSGI*RPPAAW
Trigger: CCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACAC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACCTCTAGTCCAGTCCTaGGGCCCTCAATTACGGGGA +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKPLVQS*GPQLRG
Trigger: TCCCCGTAATTGAGGGCCCCAGGACTGGACTAGAGG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGCTCAAGGAGAATATCTaGGGACAAATAACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLLKENI*GQITPL
Trigger: CAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAG...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCTCCACGTCCATATTaGGGGAACTCTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPPRPY*GNSPGG
Trigger: ACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCCCACGTTCAATCCTaGGGGCGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPHVQS*GRCQSW
Trigger: CCAGCTCTGGCAGCGCCCCCAGGATTGAACGTGGGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGAGCCAGGGGTATGTaGGCTATGTTTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGARGM*AMFAGS
Trigger: GCTACCAGCAAACATAGCTCACATACCCCTGGCTCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACTGTGGCTCTCCCACTaGGCCGGGAGTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEELWLSH*AGSSPP
Trigger: TGGAGGAGAACTCCCGGCTCAGTGGGAGAGCCACAG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGAGCCACAAAGATCCTaGCGGGTAGGTGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKEPQRS*RVGAGK
Trigger: CTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATGGAGGAAGCTGAACTaGGGCACTGAGTATATACAT +
Preference number: 4 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIWRKLN*GTEYIH
Trigger: ATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTGGAGGAAGCTGAACTaGGGCACTGAGTATATACAT +
Preference number: 4 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLWRKLN*GTEYIH
Trigger: ATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACTCTGCTCTGGGGACTaGAGGGGTCCCTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTLCSGD*RGPLQS
Trigger: GGACTGTAAGGGACCCCTGCAGTCCCCAGAGCAGAG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTCCCCTCTGAGCTCTTaGTTCACCGACGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFSPLSS*FTDAPS
Trigger: GGATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGGAGGGTTGTCAGTTaGTCCATGGTACTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGRVVS*SMVLPR
Trigger: CCTTGGCAGTACCATGGAGCAACTGACAACCCTCCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGAGCGATGCTTGGGGCTaGACTGCTAGGTTCACCCCC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSDAWG*TARFTP
Trigger: GGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCTGTCTCAGGGAAGCTaGTCTTCCTCAGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTILSQGS*SSSASG
Trigger: ACCAGATGCTGAGGAAGAGCAGCTTCCCTGAGACAG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTCAGGTTCGTTTCCTaGAGCTTTCGGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLRFVS*SFRALS
Trigger: GGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAAGCTCCGATTCCAGCTaGTGCACCCTCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKSSDSS*CTLCSF
Trigger: GAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCT...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGCCGAGCCTGTTCATaGTCCACCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSRACS*STSSCC
Trigger: GCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCTCTCTGGAAGGGCTTaGAGGGGGTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLSGRA*RGCSWR
Trigger: CCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTCCTGGGAGCAAGGTaGTGGAGGGTCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLLGAR*WRVLVG
Trigger: TCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGTCCACTCGGCCTCCTaGTTGGCCAGTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLVHSAS*LASEGA
Trigger: AGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGAC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTGACAGGTCTGAGTTaGGGCCGTGGTCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLTGLS*GRGPRG
Trigger: CCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACTCCTCTCCTCCGGCTaGTTCCACCAACTAATCCAG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLLSSG*FHQLIQ
Trigger: CTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 4 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGGGGACCCTTGTGTGGTaGAGCCCCAGTCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPGTLVW*SPSHVA
Trigger: AGCAACATGACTGGGGCTGCACCACACAAGGGTCCC...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGGGGGTGATCCCCAGTaGTCCGCTGTGGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFGGDPQ*SAVVLY
Trigger: ATAAAGGACCACAGCGGACCACTGGGGATCACCCCC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGTGTGCGCGAGTATGTaGAGGAGCGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTVCASM*RSEGVP
Trigger: AGGGACACCCTCGCTCCTCCACATACTCGCGCACAC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCGCTCCATCCAAGGTTaGCTGAGCTCTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQRSIQG*LSSSPP
Trigger: GGGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATTGTCAGTTGCTCCATaGTACTGCCAAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKLSVAP*YCQGAP
Trigger: TGGGGCCCCTTGGCAGTACCATGGAGCAACTGACAA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTTCACCCCCTCGACCTaGAGTCCAGCTATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRFTPST*SPAMPG
Trigger: ACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCACTTCCTCATCCTCTaGCCTCTGGCAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLHFLIL*PLAGGS
Trigger: GGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCTTCATGTTCCCTCTaGGCTTCAGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPSCSL*ASAWAC
Trigger: GCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTGGGGCTGTTGTGGATaGACTCGGAGTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPWGCCG*TRSGRS
Trigger: ACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTCAGGGCCTGAGCTGTaGGACAAATCGGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRSGPEL*DKSASS
Trigger: AGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTCCTCAGGTCTGGGCTaGCTCCTTCCCACACTGCTT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFSSGLG*LLPTLL
Trigger: AAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCTCCTCCTCAGGTCTaGGCTGGCTCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPPPQV*AGSFPH
Trigger: GTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCTCCTCCTCAGGTCTaGGCTGGCTCCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPPPQV*AGSFPH
Trigger: GTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGGTAAGTGGCAGAAGGTaGCCCAGTAGGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPVSGRR*PSRYWG
Trigger: GCCCCAGTACCTACTGGGCCACCTTCTGCCACTTAC...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGATCAGGTGGGCCTGCTaGGAGTGTGGTGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPIRWAC*ECGELQ
Trigger: CTGCAGTTCACCACACTCCCAGCAGGCCCACCTGAT...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTGCAGGGGGTGCTCCTaGAGGCTCTTGAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFCRGCS*RLLSSK
Trigger: CTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTTTTGCCATCTCTCTaGAAGGGCTTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLLPSL*KGLQGV
Trigger: CACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCTGAGTTGCGGCCGTaGTCCACGAGGGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSELRP*STREFT
Trigger: GGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATTGCTACAGAACTGCTaGAGGGGCAGCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLLQNC*RGSSRI
Trigger: GATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAGTCGTCCAGAGGCCTaGGGCCCATTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFSRPEA*GPLLLR
Trigger: TCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCCTCTAGTCCAGTCCTaGGGCCCTCAATTACGGGGA +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRPLVQS*GPQLRG
Trigger: TCCCCGTAATTGAGGGCCCCAGGACTGGACTAGAGG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACCTTCGGAGGCCCCCTaGGCCTTCCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEPSEAP*AFLQLL
Trigger: CAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGGCGTGGGTAGGGCTTaGGGCCTGAATTGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSGVGRA*GLNWPS
Trigger: CGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACTCCAGCATCAGGATTaGGCGACATTGACACGGGGT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLQHQD*ATLTRG
Trigger: ACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCGACTCAGCTTTCTTaGAGCGGCGGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPTQLS*SGGAWE
Trigger: CTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGAAGAACGGGGGCTCTaGGCCCAGTCTGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSEERGL*AQSEPS
Trigger: GGAAGGCTCAGACTGGGCCCAGAGCCCCCGTTCTTC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEERTRGS*VQSWLS
Trigger: ACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAGGACGCGAGGGTCCTaGGTCCAGTCCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRTRGS*VQSWLS
Trigger: ACTGAGCCAGGACTGGACCCAGGACCCTCGCGTCCT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATCACCCCTCAGAGGGTaGGGGATGGAGTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESPLRG*GMEWIG
Trigger: CCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAACCATTCCACACCCCTaGAGACCAAGGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGTIPHP*RPRSRW
Trigger: CCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGACCATTCCACACCCCTaGAGACCAAGGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLTIPHP*RPRSRW
Trigger: CCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGTGATGGGCTCAGACTaGGCTCGTCCCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEVMGSD*ARPLHP
Trigger: AGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCAC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAACTGCCTGCCGTGGGTaGGGCCACCTCCATGATCTT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEETACRG*GHLHDL
Trigger: AAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGGGAGTTCACCAGATaGACCCCAAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRREFTR*TPSSAV
Trigger: CACAGCAGAGCTTGGGGTTCATCTGGTGAACTCCCT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAGAACAGCCTGCCCCTaGCTTCTCCTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRTACP*LLLLLV
Trigger: GACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAACACCTTCAGGATCTaGCCCTCTCGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFNTFRI*PSRKGS
Trigger: GCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATTGGAGGAAGCTGAACTaGGGCACTGAGTATATACAT +
Preference number: 4 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDWRKLN*GTEYIH
Trigger: ATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCA...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGATGTCGTGCAGCTGTGTaGATCGGTGTCGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGCRAAV*IGVVVC
Trigger: ACACACAACGACACCGATGCACACAGCTGCACGACA...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTCCAGGTCTGTCCGTaGAGGTCAATGCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLQVCP*RSMLSH
Trigger: ATGAGACAGCATTGACCTGCACGGACAGACCTGGAG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGTTGCTCCATGGTACTaGCAAGGGGCCCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEVAPWY*QGAPEP
Trigger: GGGTTCTGGGGCCCCTTGGCAGTACCATGGAGCAAC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAAGCTGCTGCACCCTCTaGTCTTTCTCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSCCTL*SFSGSP
Trigger: AGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCT...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAGCTCCGATTCCAGCTaGTGCACCCTCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFSSDSS*CTLCSF
Trigger: GAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGGGCCTGATAGGGTGTaGCAGGCCGTAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEGPDRV*QAVSGR
Trigger: TCTGCCACTTACGGCCTGGCACACCCTATCAGGCCC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGGCATCAGGTGGGCCTaGTGGGAGTGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSGIRWA*WECGEL
Trigger: CAGTTCACCACACTCCCAGCAGGCCCACCTGATGCC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGGCCCAGGCTCGATCTaGACATCCAGAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLGPGSI*TSRGAS
Trigger: TGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCGCTGCCCGCCTCCTaGTCATCCTCCGAATCATAT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPLPAS*SSSESY
Trigger: ATATGATTCGGAGGATGAGCAGGAGGCGGGCAGCGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATCTCAGGGCCTCTTCTaGCTGCAGGATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESQGLF*LQDGPQ
Trigger: CTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCCCTGCACTCCCGCTaGAAGGCAGCAATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSLHSR*KAAICL
Trigger: CAAGCAGATTGCTGCCTTGCAGCGGGAGTGCAGGGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGGGACCCTTGTGTGGTaGAGCCCCAGTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSGTLVW*SPSPDS
Trigger: AGAGTCAGGACTGGGGCTGCACCACACAAGGGTCCC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581675.5
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTGCTCTTTCGCTTGCTaGGTGGCTGGGCTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQCSFAC*VAGLVL
Trigger: TAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGTCTGTCAGTGTCTGTaGGTCTGGCCGTCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQVCQCL*VWPSVA
Trigger: TGCGACAGACGGCCAGACCCACAGACACTGACAGAC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATCCAGCTATGCCAGGTaGGCAGTGCCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESSYAR*AVPMAP
Trigger: TGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCGAGCTGGATGCTTGCTaGCCCAGGCTGGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLELDAC*PRLGRQ
Trigger: TTGTCTGCCCAGCCTGGGCCAGCAAGCATCCAGCTC...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTTGCTCTGCAGGCCCTaGCTCTTGCGAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLLCRP*LLRRAE
Trigger: CTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTGAACTGCTCGGTTTaGCTGCGGCACTGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLNCSV*LRHCSS
Trigger: CGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATGCAGGCGGAAAGCCTaGAGTTCCTGTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEECRRKA*SSCARR
Trigger: CCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGCATCGATGGTGACTaGGAGCCAACTGATGATCAA +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWASIDGD*EPTDDQ
Trigger: TTGATCATCAGTTGGCTCCCAGTCACCATCGATGCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCTTCCTCTTCCTCCTaGATGTCTGACAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTISSSSS*MSDRSE
Trigger: CTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGA...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGAGTCGTCCAGAGGCCTaGGGCCCATTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSRPEA*GPLLLR
Trigger: TCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCTCCAGCATCAGGATTaGGCGACATTGACACGGGGT +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFLQHQD*ATLTRG
Trigger: ACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCAGTTGTGTGGGCTGTaGAGTACACAAACGGACCAT +
Preference number: 4 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIQLCGL*STQTDH
Trigger: ATGGTCCGTTTGTGTACTCCACAGCCCACACAACTG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLQEVG*NQAPLS
Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCTGGGGACCCTTGTGTaGTGCAGCCCCAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQLGTLV*CSPSHV
Trigger: AACATGACTGGGGCTGCACCACACAAGGGTCCCCAG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGGCCTTTCTCCTTCCTaGGCCTGTGCAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSGLSPS*ACAVEA
Trigger: CGCTTCCACTGCACAGGCCCAGGAAGGAGAAAGGCC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCAGACCAAGGTCAAGGTaGGGGTTCAGTCAAACTATC +
Preference number: 4 (lower is better)
Translates to: LIPSECHSVNAEERGLWARPRSR*GFSQTI
Trigger: GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACAGGAGCCAGGGGTATGTaGGCTATGTTTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTGARGM*AMFAGS
Trigger: GCTACCAGCAAACATAGCTCACATACCCCTGGCTCC...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAGATGGCATAGCCTGTaGCCCGGACACCGTTGGATG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRWHSL*PGHRWM
Trigger: CATCCAACGGTGTCCGGGTCACAGGCTATGCCATCT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGAGGGAGTTCACCAGATaGACCCCAAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQREFTR*TPSSAV
Trigger: CACAGCAGAGCTTGGGGTTCATCTGGTGAACTCCCT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGGGGCCCATTGTTGCTaGGAAGTCGGCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEGAHCC*EVGCSV
Trigger: AACACTGCAGCCGACTTCTCAGCAACAATGGGCCCC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGGATTGGGCGACATTaGCACGGGGTCATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGRIGRH*HGVIVK
Trigger: TTTGACTATGACCCCGTGTCAATGTCGCCCAATCCT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCTGGGTCGATGGGCTaGTTGCCTCATAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPGSMG*LPHSLS
Trigger: GCTGAGACTATGAGGCAAGCAGCCCATCGACCCAGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGTGTGTCAGTGTCGTaGAGCTGTGTGCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRSVSVS*SCVHRC
Trigger: ACACCGATGCACACAGCTGCACGACACTGACACACT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGTCCGTGCAGGTCAATaGTGTCTCATGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGVRAGQ*CLMCWE
Trigger: TTCCCAACACATGAGACAGCATTGACCTGCACGGAC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACTCAGGTTCGTTTCCTaGAGCTTTCGGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEELRFVS*SFRALS
Trigger: GGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAGCTGCTGCACCCTCTaGTCTTTCTCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLSCCTL*SFSGSP
Trigger: AGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTTTTTCCGGGCTTCCTaGTCCAGGCTCTCGCATTTC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFFFRAS*SRLSHF
Trigger: GAAATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCCTCACATCGCCTCTaGTTTTTCCGGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSSHRL*FFRASC
Trigger: GCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCGCTGCCCGCCTCCTaGTCATCCTCCGAATCATAT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPLPAS*SSSESY
Trigger: ATATGATTCGGAGGATGAGCAGGAGGCGGGCAGCGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCTCAGCCACCATGTTaGAGGGAATGTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPQPPC*RECSLS
Trigger: GGACAGGCTACATTCCCTGCAACATGGTGGCTGAGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCATGTGTTGGGAAGATaGGTGCCCCCACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPHVLGR*VPPLLC
Trigger: ACACAGAAGTGGGGGCACCCATCTTCCCAACACATG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCGGAGTGGGAGGAGTTaGAGAGAGACTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQRSGRS*RETLPS
Trigger: AGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCGGAAGCTCTGCTTCTaGATTCTCATTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFRKLCF*ILIGTL
Trigger: GAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCACGCTCTACAAAATTaGAAGGGACCAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRHALQN*KGPGPF
Trigger: GAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATCCTCAGGTCTGGGCTaGCTCCTTCCCACACTGCTT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESSGLG*LLPTLL
Trigger: AAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAATCAGGTGGGCCTGCTaGGAGTGTGGTGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEIRWAC*ECGELQ
Trigger: CTGCAGTTCACCACACTCCCAGCAGGCCCACCTGAT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCTGGGTCTCCTCCTTaGCACATCTCGGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPGSPP*HISVFG
Trigger: GCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTTGCTACAGAACTGCTaGAGGGGCAGCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQLLQNC*RGSSRI
Trigger: GATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGAGGCCCAGTTGTGTaGGCTGTGGAGTACACAAAC +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGGPVV*AVEYTN
Trigger: GTTTGTGTACTCCACAGCCCACACAACTGGGCCTCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCCTCCACGTCCATATTaGGGGAACTCTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLPPRPY*GNSPGG
Trigger: ACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCCTCCACGTCCATATTaGGGGAACTCTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSPPRPY*GNSPGG
Trigger: ACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTGCCCGCTGGGGAGATaGGGCTCCAATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQCPLGR*GSNKIQ
Trigger: CTGGATTTTATTGGAGCCCCATCTCCCCAGCGGGCA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGAGGATTGGGCGACATTaGCACGGGGTCATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPRIGRH*HGVIVK
Trigger: TTTGACTATGACCCCGTGTCAATGTCGCCCAATCCT...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAACACCTTCAGGATCTaGCCCTCTCGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSNTFRI*PSRKGS
Trigger: GCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTCTGCTCTCTGCTGCTaGTCTTTCGCTTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSSALCC*SFACWV
Trigger: CACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTGTTGGGAAGATGGGTaGCCCCACTTCTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQCWEDG*PHFCVL
Trigger: CAACACACAGAAGTGGGGGCACCCATCTTCCCAACA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACGGGCATTCTCATTCTaGGCTTGTCTCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRAFSF*ACLSCS
Trigger: ACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGATGTGCTTCAGCACTTaGTCCAGGCTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQMCFST*SRLSSL
Trigger: CAAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACAT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTATTGCAGGGCTGTaGCAGTATGTGATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRCIAGL*QYVMLS
Trigger: GGACAGCATCACATACTGCCACAGCCCTGCAATACA...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTTGTGTGTGTGTGTGTaGGTGTCTGTATTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPLCVCV*VSVLQG
Trigger: GCCCTGCAATACAGACACCCACACACACACACACAA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACATGTGTTGGGAAGATaGGTGCCCCCACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTHVLGR*VPPLLC
Trigger: ACACAGAAGTGGGGGCACCCATCTTCCCAACACATG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACGTCTCCTTTGGGCTTaGAACTCTCCTCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTRLLWA*NSPQTS
Trigger: TGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGCTCATATTCAGCTTaGCCTTCAGGAAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGSSYSA*PSGKPP
Trigger: TGGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTGAACTGCTCGGTTTaGCTGCGGCACTGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLNCSV*LRHCSS
Trigger: CGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCCATTCACACAGATATaGAAGCCGTGTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLPFTQI*KPCSST
Trigger: AGTGGAGCTACACGGCTTCCATATCTGTGTGAATGG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGGAAGGAGCAAGTCCTaGAACCCAGCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSGRSKS*NPAPLP
Trigger: AGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQPATCF*KEQVLE
Trigger: TTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGG...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACTCAAGGAGAATATCTaGGGACAAATAACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLKENI*GQITPL
Trigger: CAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAGACCAAGGTCAAGGTaGGGGTTCAGTCAAACTATC +
Preference number: 4 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGRPRSR*GFSQTI
Trigger: GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTACACTCAGGAAACTaGGTTCAGGGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLHSGN*VQGLSC
Trigger: ACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTGTCGTGCAGCTGTGTaGATCGGTGTCGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSCRAAV*IGVVVC
Trigger: ACACACAACGACACCGATGCACACAGCTGCACGACA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAAGTGTGTCAGTGTCGTaGAGCTGTGTGCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESVSVS*SCVHRC
Trigger: ACACCGATGCACACAGCTGCACGACACTGACACACT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTCCAGGTCTGTCCGTaGAGGTCAATGCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLQVCP*RSMLSH
Trigger: ATGAGACAGCATTGACCTGCACGGACAGACCTGGAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCGGGCATTCTCATTCTaGGCTTGTCTCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRAFSF*ACLSCS
Trigger: ACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAGCCTCCTGAGGAGCTaGTTCCCCTTGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSSLLRS*FPLEKK
Trigger: TTTCTTCTCCAAGGGGAAGCAGCTCCTCAGGAGGCT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEESLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAGTCTGAGCCTTCCCTaGTCAGCAGAGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSSLSLP*SAETVI
Trigger: GATCACTGTCTCTGCTGAGCAGGGAAGGCTCAGACT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAGTATCAGCGATGCTTaGGGCTGCACTGCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLSISDA*GCTARF
Trigger: GAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCGTCTCCTTTGGGCTTaGAACTCTCCTCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRLLWA*NSPQTS
Trigger: TGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCTCTTCCTCAGCATCTaGTTTTCCTCCTTAAGGATG +
Preference number: 4 (lower is better)
Translates to: LESNEQNKANPTPLSAPLLFLSI*FSSLRM
Trigger: CATCCTTAAGGAGGAAAACCAGATGCTGAGGAAGAG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCATTCACACAGATATaGAAGCCGTGTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: ELESNEQNKANPTPLSAPPFTQI*KPCSST
Trigger: AGTGGAGCTACACGGCTTCCATATCTGTGTGAATGG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACAAATGCAGCCACCATaGAGTGGGGAGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEQMQPP*SGELSG
Trigger: ACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR TCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAAACGGACCATTCCCTaGGCCCTCAAGGAGAATATC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLKRTIP*ALKENI
Trigger: GATATTCTCCTTGAGGGCTCAGGGAATGGTCCGTTT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR TCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACCAGTCCTGGCTCAGTaGCCTTGGTCAAGTTACATA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEPVLAQ*PWSSYI
Trigger: TATGTAACTTGACCAAGGTCACTGAGCCAGGACTGG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTGTGGGTGTCTGTATTaGAGGGCTGTGGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSCGCLY*RAVAVC
Trigger: ACATACTGCCACAGCCCTGCAATACAGACACCCACA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCCTGTGTGTCACTGTCTaGCCATTTCAGAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLCVTV*PFQSCQ
Trigger: CTGGCAACTCTGAAATGGGCAGACAGTGACACACAG...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR GCA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGTCCGTGCAGGTCAATaGTGTCTCATGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSVRAGQ*CLMCWE
Trigger: TTCCCAACACATGAGACAGCATTGACCTGCACGGAC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCTCTTCCTCTTCCTCCTaGATGTCTGACAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLSSSSS*MSDRSE
Trigger: CTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGA...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR TCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGAGGAAGCTGAACTaGGGCACTGAGTATATACAT +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWRKLN*GTEYIH
Trigger: ATGTATATACTCAGTGCCTCAGTTCAGCTTCCTCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 4 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CCA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACTCTTCCTCAGCATCTaGTTTTCCTCCTTAAGGATG +
Preference number: 4 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTLFLSI*FSSLRM
Trigger: CATCCTTAAGGAGGAAAACCAGATGCTGAGGAAGAG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CCA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCAGACCAAGGTCAAGGTaGGGGTTCAGTCAAACTATC +
Preference number: 4 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLRPRSR*GFSQTI
Trigger: GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
3UTR CAA 72 bp AAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTaGATTCCCTCTGAATGCCACAGTGTTAACGCAGAA +
Preference number: 4 (lower is better)
Translates to: KEPFSSDLHQGS*IPSECHSVNAE
Trigger: TTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR GCA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACAGCCCCAGTCATGTTaGTCTCTCTACATATATCTA +
Preference number: 4 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEQPQSC*SLYIYL
Trigger: TAGATATATGTAGAGAGAGCAACATGACTGGGGCTG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 90 bp CAGGAGGCGGCTCCCAGGCCAGCACCACGCTGTGGGCCAGCTGCTTaGGGACCACCAGACGGCGGGGGTAAGGCACGGCAGGAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: QEAAPRPAPRCGPAA*GPPDGGGKARQEAR
Trigger: GCGAGCCTCCTGCCGTGCCTTACCCCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 90 bp ACGGCGGGGGTAAGGCACGGCAGGAGGCTCGCCCAGGCCCTCCGGTaGTGGGCTCAGACTGAGCTCGTCCCCTGCATCCTCCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TAGVRHGRRLAQALR*WAQTELVPCILLLR
Trigger: CCTGAGGAGGAGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCACCGGAGGGCCTGGGCGAGCCTCCTGCCGTGCCTTACCCCCGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp TGGAGGCCGGACAGGCCTCTCCTGCAGTCCACTCGGCCTCCTGCTTaGCCAGTGAGGGAGCTGCGGGGCCAGGGTCCTTCTCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: WRPDRPLLQSTRPPA*PVRELRGQGPSHPG
Trigger: CCCTGGGTGAGAAGGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCGGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 90 bp GGGCACCACTCCGGCCCGGGCACCCACCGCCAAGCAACAGCGCAGTaGGTCAGAGCTGCCCCGGCTAGTCAGGGCCTGGACAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: GHHSGPGTHRQATAQ*VRAAPASQGLDRNV
Trigger: CACATTTCTGTCCAGGCCCTGACTAGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTGGCGGTGGGTGCCCGGGCCGGAGTGGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp TTGCCGGGCACCCAGGTGATCTCAGCAGATGTGGCTGTCAACCGATaGACCCGCAGCTGGCTGGGCACCACTCCGGCCCGGGCACCCACC +
Preference number: 5 (lower is better)
Translates to: LPGTQVISADVAVNR*TRSWLGTTPARAPT
Trigger: GGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp AGGGCGGGAGTGATAGGAGCCGGGATGGAGTCCGCCGACTCCCCGTaGGGCGACATGGTGCGCACGACCACCTCACGACACACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RAGVIGAGMESADSP*GDMVRTTTSRHTCS
Trigger: GCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGGCTCCTATCACTCCCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp GCCAGGTCTTCGGGGCTGACCACTGTCACAGCCCAGCCCCAGCAATaGAGGTTCAGGCGGGCCAGGGTCTCGGGAAGAACAGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: ARSSGLTTVTAQPQQ*RFRRARVSGRTACP
Trigger: GGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp TGGCCTCTCCGGTCTCTGTTGCCCGGGAGAGTGGCTCCTTGGCTCTaGCCGTCGCACTGCGGCCTCTCCGCTCTGGTTCCCCTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: WPLRSLLPGRVAPWL*PSHCGLSALVPLSP
Trigger: GGGAGAAAGGGGAACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp TTGGCCAGCAGTGCACTGGCTGTCTCACTGAGGTCCCGGGCTCGCTaGCGGGCTAGGGCCTTCCGACACAACTCCAAGCTGGTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LASSALAVSLRSRAR*RARAFRHNSKLVPG
Trigger: GCCGGGGACCAGCTTGGAGTTGTGTCGGAAGGCCCTAGCCCGCCAGCGAGCCCGGGACCTCAGTGAGACAGCCAGTGCACTGCTGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCGGGAGAGTGGCTCCTaGGCTCTGCCCGTCGCACTG +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSRESGS*ALPVAL
Trigger: CAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp TCCCGTAGGCTGAGCCGAGCCTGTTCATGCTCCACCTCCAGCTGCTaGCGCCGCTGGGCCACCTCCCGCATGTGCTTCAGCACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SRRLSRACSCSTSSC*RRWATSRMCFSTCS
Trigger: GGAGCAAGTGCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000583624.1
CDS CCA 90 bp CAGGTGATCTCAGCAGATGTGGCTGTCAACCGATGGACCCGCAGCTaGCTGGGCACCACTCCGGCCCGGGCACCCACCGCCAAGCAACAG +
Preference number: 5 (lower is better)
Translates to: QVISADVAVNRWTRS*LGTTPARAPTAKQQ
Trigger: CTGTTGCTTGGCGGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp CTTTCTCCCAGGCTGGGAGGCGTGGGTAGGGCTTGGGGCCTGAATTaGCCTTCGGAGGCCCCCTGGGCCTTCCTACAGTTGCTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: LSPRLGGVGRAWGLN*PSEAPWAFLQLLCP
Trigger: GGGGCACAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCCTCCCAGCCTGGGAGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp ACCCGCACCTTCTCCGCCCGGCCACCAGGTGGCCCTGCGCAGGGGTaGGCCCTACTCTCCAAGGCCTTTGTGTTCACACATGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: TRTFSARPPGGPAQG*ALLSKAFVFTHGSP
Trigger: AGGGCTTCCATGTGTGAACACAAAGGCCTTGGAGAGTAGGGCCCACCCCTGCGCAGGGCCACCTGGTGGCCGGGCGGAGAAGGTGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp GATGGGTTACCGACAGACCCGCACCTTCTCCGCCCGGCCACCAGGTaGCCCTGCGCAGGGGTGGGCCCTACTCTCCAAGGCCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: DGLPTDPHLLRPATR*PCAGVGPTLQGLCV
Trigger: AACACAAAGGCCTTGGAGAGTAGGGCCCACCCCTGCGCAGGGCCACCTGGTGGCCGGGCGGAGAAGGTGCGGGTCTGTCGGTAACCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGGGCCCTGGGGACCCTaGTGTGGTGCAGCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSGPWGP*CGAAPV
Trigger: GACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp AGTATGTGGAGGAGCGAGGGTGTCCCTGTGGGGGTAGGGAGGATGTaGAGAGGCCACCGACAGCTGCGCCTGGGTGAGGGTGCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SMWRSEGVPVGVGRM*RGHRQLRLGEGACV
Trigger: CACACACGCACCCTCACCCAGGCGCAGCTGTCGGTGGCCTCTGCACATCCTCCCTACCCCCACAGGGACACCCTCGCTCCTCCACATACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp TTCTCCCGTAGGCTGAGCCGAGCCTGTTCATGCTCCACCTCCAGCTaGTGCCGCCGCTGGGCCACCTCCCGCATGTGCTTCAGCACTTGC +
Preference number: 5 (lower is better)
Translates to: FSRRLSRACSCSTSS*CRRWATSRMCFSTC
Trigger: GCAAGTGCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000583624.1
CDS GCA 90 bp CTCTGGGCTTCAGCCTGGGCCTGCTGCAGTCTCCGGACCTCCTCCTaGTTCTCCCGTAGGCTGAGCCGAGCCTGTTCATGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LWASAWACCSLRTSS*FSRRLSRACSCSTS
Trigger: GGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp TCCCCGTGGGGCGACATGGTGCGCACGACCACCTCACGACACACCTaGAGCAGCTGCAGCTGGGACAACTCCACCAGTACACTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPWGDMVRTTTSRHT*SSCSWDNSTSTLPA
Trigger: GGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp GACCTGGAGTCCAGCTATGCCAGGTGGGCAGTGCCCATGGCTCCATaGCTCCAGGGTCCCCAGGCCGTGGGAGGGTTGTCAGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: DLESSYARWAVPMAP*LQGPQAVGGLSVAP
Trigger: TGGAGCAACTGACAACCCTCCCACGGCCTGGGGACCCTGGAGCCATGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp CTGGGCCTGGCTGGGCAACTGGCTTCCAAAGGCACCTGGGAGGTATaGAGACCACCCCCAGGGTGGGAGTGTCCTGACTCTCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGLAGQLASKGTWEV*RPPPGWECPDSQPG
Trigger: CCCAGGCTGAGAGTCAGGACACTCCCACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577871.1
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGGGTCGGGCTGGGACTaGGCCCCATTCTCCCTGATG +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWGSGWD*APFSLM
Trigger: CATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 90 bp CTGGAGGACTCAGGAGACAAGGGACACTGGCCAGGTCTTCGGGGCTaGCCACTGTCACAGCCCAGCCCCAGCAATGCAGGTTCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: LEDSGDKGHWPGLRG*PLSQPSPSNAGSGG
Trigger: CCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp CGCAGCTCCCCATTCACACAGATATGGAAGCCGTGTAGCTCCACTTaGTCAGGAGGCGGCTCCCAGGCCAGCACCACGCTGTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RSSPFTQIWKPCSST*SGGGSQASTTLWAS
Trigger: GCTGGCCCACAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGGCTTCCATATCTGTGTGAATGGGGAGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp GGCGACATGGTGCGCACGACCACCTCACGACACACCTGCAGCAGCTaGAGCTGGGACAACTCCACCAGTACACTGCCTGCCGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GDMVRTTTSRHTCSS*SWDNSTSTLPAVGE
Trigger: CTCACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp CTCCGGCTCTGCTCTCTGCTGCTGCTCTTTCGCTTGCTGGGTGGCTaGGCTGGTCCTAAGGAGGCCTGGGTCGATGGGCTGCTTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LRLCSLLLLFRLLGG*AGPKEAWVDGLLAS
Trigger: TGAGGCAAGCAGCCCATCGACCCAGGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp TCAGCCCGGCCAGAGGCTTCAGGAGCTGCTGGGGGTGATCCCCAGTaGTCCGCTGTGGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SARPEASGAAGGDPQ*SAVVLYLRLCSLLL
Trigger: CAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGGGATCACCCCCAGCAGCTCCTGAAGCCTCTGGCCGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp AGCTTGGCCTTCAGGAAAGCCTCCACTTCCTCATCCTCTGGCCTCTaGCAGGCGGGTCCAGAGCTGGATGCTTGCTGGCCCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLAFRKASTSSSSGL*QAGPELDACWPRLG
Trigger: GCCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTGGAGGCTTTCCTGAAGGCCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp GCAGATGTGAGCAGATCCAAGGGGCCCGGGTGCAGGCGGAAAGCCTaGAGTTCCTGTGCCAGGAGGCTGAACTGCTCGGTTTGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ADVSRSKGPGCRRKA*SSCARRLNCSVWLR
Trigger: CCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGATCTGCTCACATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp ATGGTGCGCACGACCACCTCACGACACACCTGCAGCAGCTGCAGCTaGGACAACTCCACCAGTACACTGCCTGCCGTGGGTGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: MVRTTTSRHTCSSCS*DNSTSTLPAVGEAT
Trigger: GGTGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp GCCCCCTCACCTGCGTCAGCCACCAGGTGTTGGCAGCTGGCGAGATaGCCTGAGGGTCAGGGTCACAGCTATCATCCCTCTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: APSPASATRCWQLAR*PEGQGHSYHPSAER
Trigger: CCTCTCTGCAGAGGGATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp TCCACAGGGCCCCCTCACCTGCGTCAGCCACCAGGTGTTGGCAGCTaGCGAGATGGCCTGAGGGTCAGGGTCACAGCTATCATCCCTCTG +
Preference number: 5 (lower is better)
Translates to: STGPPHLRQPPGVGS*RDGLRVRVTAIIPL
Trigger: CAGAGGGATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAGGGGGCCCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCACGCTCCATCCAAGGTaGGCTGAGCTCTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSTLHPR*AELFPT
Trigger: GGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCGT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGCTCGGAAGACTTaGGGGTGCAGCGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLQARKT*GCSAQG
Trigger: CCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCTG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGTGGGCCAGCTGCTaGAGGACCACCAGACGGCGG +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLWASC*RTTRRR
Trigger: CCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGTCTCTCTGGAAGGGCTaGCAGGGGGTGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWSLWKG*QGVLLE
Trigger: CTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGA...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGAGGCCGCCTGCGGCTaGGGGGCTTCTCAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDEAACG*GASQGS
Trigger: GCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGAGGCCGCCTGCGGCTaGGGGGCTTCTCAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQEAACG*GASQGS
Trigger: GCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGGGCCCTGGGGACCCTaGTGTGGTGCAGCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLGPWGP*CGAAPV
Trigger: GACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSRVGPT*AWPFSF
Trigger: GAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGGCCCCAGGGTCTTaGGGGGCGGGACCTTACAGG +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLAPGS*GAGPYR
Trigger: CCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS TCA 90 bp TGCAGGTTCAGGCGGGCCAGGGTCTCGGGAAGAACAGCCTGCCCCTaGCTTCTCCTCCTCCTCGTCCTCCTCTTCCTCTTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CRFRRARVSGRTACP*LLLLLVLLFLFLLL
Trigger: GAGGAGGAGGAAGAGGAAGAGGAGGACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 90 bp CTCTGCAACAGACGCCCACTCCACGCGGCCAGCCCACGTACAGTCTaGCCACTACGCAGCAGGGTTCAAGGCAGGCTCCAAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LCNRRPLHAASPRTV*PLRSRVQGRLQGSA
Trigger: AGCAGAGCCTTGGAGCCTGCCTTGAACCCTGCTGCGTAGTGGTCAGACTGTACGTGGGCTGGCCGCGTGGAGTGGGCGTCTGTTGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS TCA 90 bp CTCACCTGCGTCAGCCACCAGGTGTTGGCAGCTGGCGAGATGGCCTaGGGGTCAGGGTCACAGCTATCATCCCTCTGCAGAGAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LTCVSHQVLAAGEMA*GSGSQLSSLCREGH
Trigger: GTGCCCCTCTCTGCAGAGGGATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 90 bp CAGATCCAAGGGGCCCGGGTGCAGGCGGAAAGCCTGGAGTTCCTGTaGCAGGAGGCTGAACTGCTCGGTTTGGCTGCGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QIQGARVQAESLEFL*QEAELLGLAAALFF
Trigger: GAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp AGCTATAACGTGCTAGGAAGACCTGGATCCTGGCTCCTCCCCGGCTaGCCTCTGGCGCAGCTGGGAGCAGGGAGACACTGTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SYNVLGRPGSWLLPG*PLAQLGAGRHCLPP
Trigger: TGGAGGCAGACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACGTTATAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp GCATCCTCCTCCTCAGGTCTGGGCTGGCTCCTTCCCACACTGCTTTaGCCCCCGCTACTGCTGCCACCCCCACCTACACTCAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: ASSSSGLGWLLPTLL*PPLLLPPPPTLRKL
Trigger: CAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp CCACTTGGGCCTGATAGGGTGTGCCAGGCCGTAAGTGGCAGAAGGTaGCCCAGTAGGTACTGGGGCTGGCAGGTGGGCACTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PLGPDRVCQAVSGRR*PSRYWGWQVGTLPH
Trigger: ATGGGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGGCCCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCAGGCCGTGGGAGGGTaGTCAGTTGCTCCATGGTAC +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWQAVGG*SVAPWY
Trigger: GTACCATGGAGCAACTGACAACCCTCCCACGGCCTG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCGCTGAACTGCTCGGTTaGGCTGCGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSAELLG*AAALFF
Trigger: GAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGC...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCTCGTGGGACCCTTTaGCCATCTCTCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPRGTL*PSLWKG
Trigger: GCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGCCTGGGGCCCATTGTaGCTGAGAAGTCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSAWGPL*LRSRLQ
Trigger: CTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTGAGGCCTGGGGCCCATaGTTGCTGAGAAGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSEAWGP*LLRSRL
Trigger: CAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTC...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCCTGATTTCCAAGCACTaGGGGGAAAGGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSLISKH*GERQLA
Trigger: GGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAG...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGGCTTGGGGCCTGAATaGGCCTTCGGAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLGLGPE*AFGGPL
Trigger: CAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCACTGGGGACCCTCCTaGCCCACCAGAGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSHWGPS*PTRVSL
Trigger: CAGGCTCACTCTGGTGGGCAAGGAGGGTCCCCAGTG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS TCA 90 bp TCCCCTCTGAGCTCTTGCTTCACCGACGCTCCATCCAAGGTTGGCTaGGCTCTTCCCCACCCACAAAGGAGGCTGCAGAAGGCGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SPLSSCFTDAPSKVG*ALPHPQRRLQKAPG
Trigger: CCCTGGCGCCTTCTGCAGCCTCCTTTGTGGGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 90 bp TGGCCCAGTAGGTACTGGGGCTGGCAGGTGGGCACTCTTCCCCATTaGGGTAGATGGCATGGGCCAAGTTGCTATTGCCGGGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: WPSRYWGWQVGTLPH*GRWHGPSCYCRAPR
Trigger: CCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCATCTACCTCAATGGGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp TGGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTGCTCTTTCGCTTaGTGGGTGGCTGGGCTGGTCCTAAGGAGGCCTGGGTCGATGGGC +
Preference number: 5 (lower is better)
Translates to: WSFISGSALCCCSFA*WVAGLVLRRPGSMG
Trigger: GCCCATCGACCCAGGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp CCCAGTGGTCCGCTGTGGTCCTTTATCTCCGGCTCTGCTCTCTGCTaGTGCTCTTTCGCTTGCTGGGTGGCTGGGCTGGTCCTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSGPLWSFISGSALC*CSFACWVAGLVLRR
Trigger: CCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp AGCCAACTGATGATCAAGATCCCAGGGGAGGGCCCAGGCTCGATCTaGACATCCAGAGGGGCATCAGGTGGGCCTGCTGGGAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SQLMIKIPGEGPGSI*TSRGASGGPAGSVV
Trigger: CACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCCCTCCCCTGGGATCTTGATCATCAGTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000585149.1
CDS CCA 90 bp TCCTTTATCTCCGGCTCTGCTCTCTGCTGCTGCTCTTTCGCTTGCTaGGTGGCTGGGCTGGTCCTAAGGAGGCCTGGGTCGATGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SFISGSALCCCSFAC*VAGLVLRRPGSMGC
Trigger: GCAGCCCATCGACCCAGGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp CCTCTCCCCTCTGAGCTCTTGCTTCACCGACGCTCCATCCAAGGTTaGCTGAGCTCTTCCCCACCCACAAAGGAGGCTGCAGAAGGCGCC +
Preference number: 5 (lower is better)
Translates to: PLPSELLLHRRSIQG*LSSSPPTKEAAEGA
Trigger: GGCGCCTTCTGCAGCCTCCTTTGTGGGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp CCCAGCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTaGATGTCTGACAGGTCTGAGTTGCGGCCGTGGTCCACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PSSSSSSSSSSSSSS*MSDRSELRPWSTRE
Trigger: CTCCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 90 bp AGCTCAAGGAACGAGAACCCAGGAAGCTGGGCCTGGCTGGGCAACTaGCTTCCAAAGGCACCTGGGAGGTATGGAGACCACCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SSRNENPGSWAWLGN*LPKAPGRYGDHPQG
Trigger: ACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAGCTTCCTGGGTTCTCGTTCCTTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577871.1
ENST00000581692.2
CDS CCA 90 bp GTCCTTTTCCACAGGGCCCCCTCACCTGCGTCAGCCACCAGGTGTTaGCAGCTGGCGAGATGGCCTGAGGGTCAGGGTCACAGCTATCAT +
Preference number: 5 (lower is better)
Translates to: VLFHRAPSPASATRC*QLARWPEGQGHSYH
Trigger: ATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAGGGGGCCCTGTGGAAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp CTGGGCCTGGCTGGGCAACTGGCTTCCAAAGGCACCTGGGAGGTATaGAGACCACCCCCAGGGTGGGAGTGTCCTGAAACAGGGACTTTG +
Preference number: 5 (lower is better)
Translates to: LGLAGQLASKGTWEV*RPPPGWECPETGTL
Trigger: CAAAGTCCCTGTTTCAGGACACTCCCACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp GCCTTCAGGGTGTGGAGCCAGTACCCACTCCATGGGGAGGAAGATTaGGACTCTCCCTTAAGGGCCCCTAAGAGGACTGCCGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: AFRVWSQYPLHGEED*DSPLRAPKRTAGRP
Trigger: TGGCCTCCCGGCAGTCCTCTTAGGGGCCCTTAAGGGAGAGTCCCAATCTTCCTCCCCATGGAGTGGGTACTGGCTCCACACCCTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp CCCTTCTCCCTCCAGGGTGCAGGGCTGACAGGGCCCAAGAGTTCTTaGAACCTGCCCCTCAGGATGGGTGCCCCCAACTTCTCACATGTC +
Preference number: 5 (lower is better)
Translates to: PFSLQGAGLTGPKSS*NLPLRMGAPNFSHV
Trigger: GACATGTGAGAAGTTGGGGGCACCCATCCTGAGGGGCAGGTTCCAAGAACTCTTGGGCCCTGTCAGCCCTGCACCCTGGAGGGAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGCTGCTCTTTCGCTaGCTGGGTGGCTGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSLLLFR*LGGWAG
Trigger: ACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCATGCTGTCTCATGTGTaGGGAAGATGGGTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSMLSHV*GRWVPP
Trigger: TGGGGGCACCCATCTTCCCAACACATGAGACAGCAT...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTGGGAGGGTTGTCAGTaGCTCCATGGTACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSWEGCQ*LHGTAK
Trigger: CTTGGCAGTACCATGGAGCAACTGACAACCCTCCCA...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGGAGCTCCCGTCTCCTTaGGGCTTGGAACTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWELPSP*GLELSS
Trigger: TGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTC...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAAGCGTCTCCCGCTGGTaGCGCAGCGCGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVSVSRW*RSAICL
Trigger: GAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCATGACTTGGGGCTGTaGTGGATGGACTCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWHDLGL*WMDSEW
Trigger: CCACTCCGAGTCCATCCACAACAGCCCCAAGTCATG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCCTGGGTCTCCTCCTaGGCACATCTCGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPWVSS*AHLGIW
Trigger: CCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATTCTGACAGGTCTGAGTaGCGGCCGTGGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHSDRSE*RPWSTR
Trigger: CCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGA...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGGGTCGGGCTGGGACTaGGCCCCATTCTCCCTGATG +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLGSGWD*APFSLM
Trigger: CATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCGGCTTGGGGCCTGAATaGGCCTTCGGAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSGLGPE*AFGGPL
Trigger: CAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCC...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCGGGAGAGTGGCTCCTaGGCTCTGCCCGTCGCACTG +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRESGS*ALPVAL
Trigger: CAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGACCCCGCTGGAGCAGTaGCTGTCTCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLTPLEQ*LSPSRA
Trigger: AGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTTGGAGCGGCGGGGCTaGGGAGGAGGCCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQLERRG*GGGPVV
Trigger: CACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 90 bp ACTGCTGCCACCCCCACCTACACTCAGGAAACTGAGTTCAGGGCCTaGGCTGTGGGACAAATCGGCCAGCTCTGGAGGGAGGGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: TAATPTYTQETEFRA*AVGQIGQLWREGGQ
Trigger: CTGACCTCCCTCCCTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 90 bp TTTGGCCCCCGCTACTGCTGCCACCCCCACCTACACTCAGGAAACTaGGTTCAGGGCCTGAGCTGTGGGACAAATCGGCCAGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: FGPRYCCHPHLHSGN*VQGLSCGTNRPALE
Trigger: CTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp AGTGGTCCGCTGTGGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTaGTCTTTCGCTTGCTGGGTGGCTGGGCTGGTCCTAAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SGPLWSFISGSALCC*SFACWVAGLVLRRP
Trigger: AGGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp ATCCCCAGTGGTCCGCTGTGGTCCTTTATCTCCGGCTCTGCTCTCTaGTGCTGCTCTTTCGCTTGCTGGGTGGCTGGGCTGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: IPSGPLWSFISGSAL*CCSFACWVAGLVLR
Trigger: CCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp CCACTGAGCCGGGAGTTCTCCTCCACCAGGCGGGCATTCTCATTCTaGGCTTGTCTCAGCTGCAGTTCCAGCTCCTCACATCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLSREFSSTRRAFSF*ACLSCSSSSSHRLC
Trigger: GCAGAGGCGATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCGCCTGGTGGAGGAGAACTCCCGGCTCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp CAGAGGCTTCAGGAGCTGCTGGGGGTGATCCCCAGTGGTCCGCTGTaGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTGCTCTTTCGCT +
Preference number: 5 (lower is better)
Translates to: QRLQELLGVIPSGPL*SFISGSALCCCSFA
Trigger: AGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGGGATCACCCCCAGCAGCTCCTGAAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp TGTGACCCGGACACCGTTGGATGTGCCAGCAGCATCGATGGTGACTaGGAGCCAACTGATGATCAAGATCCCAGGGGAGGGCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CDPDTVGCASSIDGD*EPTDDQDPRGGPRL
Trigger: GAGCCTGGGCCCTCCCCTGGGATCTTGATCATCAGTTGGCTCCCAGTCACCATCGATGCTGCTGGCACATCCAACGGTGTCCGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000585149.1
CDS-3UTR CAA 90 bp CTGGGGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTGTGCATCGGTGTCGTaGTGTGTCTGTCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LGASQGLFCLQDGPQLHSCASVS*CVCQCL
Trigger: CAGACACTGACAGACACACAACGACACCGATGCACA...GGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCCTTCCCACACTGCTTaGGCCCCCGCTACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSPSHTA*APATAA
Trigger: GGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAATTCTCCAGCACGGCCTaGGGTGGCGCCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKFSSTA*GGAPGP
Trigger: GGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGAA...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGAGCTGAGCCTCCACTaGGGCCTGATAGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSELSLH*GLIGCA
Trigger: GGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTTCTCTCTGGAAGGGCTaGCAGGGGGTGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSSLWKG*QGVLLE
Trigger: CTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGA...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGGCACATCTCGGTATTaGGCGCCTGCTGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDGTSRY*APAGPV
Trigger: CACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGAGGCCGCCTGCGGCTaGGGGGCTTCTCAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKEAACG*GASQGS
Trigger: GCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGCCTGGGGCCCATTGTaGCTGAGAAGTCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSAWGPL*LRSRLQ
Trigger: CTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAGAGGCCTGGGGCCCATaGTTGCTGAGAAGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIEAWGP*LLRSRL
Trigger: CAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTC...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATCCGACTCAGCTTTCTaGGAGCGGCGGGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYISDSAF*ERRGLG
Trigger: TCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGGCCTCCACGTCCATATaGGGGGAACTCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLASTSI*GELSWG
Trigger: CCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGC...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRVGPT*AWPFSF
Trigger: GAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS GCA 90 bp TTGAAGCTGCAGAGCTGCCGGAGGAGTATCAGCGATGCTTGGGGCTaGACTGCTAGGTTCACCCCCTCGACCTGGAGTCCAGCTATGCCA +
Preference number: 5 (lower is better)
Translates to: LKLQSCRRSISDAWG*TARFTPSTWSPAMP
Trigger: TGGCATAGCTGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp GCTGTTGTGGATGGACTCGGAGTGGGAGGAGTTGGAGAGAGACTCTaGCTTCTTGGCTGTCCTTCGAGGGACCCCAGTGAGAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AVVDGLGVGGVGERL*LLGCPSRDPSESGR
Trigger: CCTGCCACTCTCACTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp GGCTGGGACTTGGCCCCATTCTCCCTGATGCTGTTGCCAGCAACCTaGTTCTGGAAGGAGCAAGTCCTGGAACCCAGCTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GWDLAPFSLMLLPAT*FWKEQVLEPSSSSS
Trigger: GGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp GGCATGACTTGGGGCTGTTGTGGATGGACTCGGAGTGGGAGGAGTTaGAGAGAGACTCTGCCTTCTTGGCTGTCCTTCGAGGGACCCCAG +
Preference number: 5 (lower is better)
Translates to: GMTWGCCGWTRSGRS*RETLPSWLSFEGPQ
Trigger: CTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 90 bp AGCAAGGTGCTGGAGGGTCCTCGTGGGACCCTTTTGCCATCTCTCTaGAAGGGCTTGCAGGGGGTGCTCCTGGAGGCTCTTGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SKVLEGPRGTLLPSL*KGLQGVLLEALEFQ
Trigger: TTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp CAAGGAGAGGCAAGCTCAAGGAACGAGAACCCAGGAAGCTGGGCCTaGCTGGGCAACTGGCTTCCAAAGGCACCTGGGAGGTATGGAGAC +
Preference number: 5 (lower is better)
Translates to: QGEASSRNENPGSWA*LGNWLPKAPGRYGD
Trigger: GTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAGCTTCCTGGGTTCTCGTTCCTTGAGCTTGCCTCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577871.1
ENST00000581692.2
CDS CCA 90 bp TCTTCTCCTCCTCGTTCTCTGAGGACAGGGAACAAAGAGAGGAGATaGGTTACCGACAGACCCGCACCTTCTCCGCCCGGCCACCAGGTG +
Preference number: 5 (lower is better)
Translates to: SSPPRSLRTGNKERR*VTDRPAPSPPGHQV
Trigger: CACCTGGTGGCCGGGCGGAGAAGGTGCGGGTCTGTCGGTAACCCATCTCCTCTCTTTGTTCCCTGTCCTCAGAGAACGAGGAGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp TTTCCACAGCCTAAGGGGCCTGCAGCCTCCCATGTCACAGAACCATaGCTGACGCTGAGAACCAGGGCCTCACCTCCCACCACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: FPQPKGPAASHVTEP*LTLRTRASPPTTVR
Trigger: TCTGACAGTGGTGGGAGGTGAGGCCCTGGTTCTCAGCGTCAGCCATGGTTCTGTGACATGGGAGGCTGCAGGCCCCTTAGGCTGTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp GCCTTGGCCCCATTCTCCCTGATGCTGTTGCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAACCCAGCTCCTCTTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALAPFSLMLLPATCF*KEQVLEPSSSSSSS
Trigger: GGAGGAGGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582679.1
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGACGCTCCATCCAAGGTaGGCTGAGCTCTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLTLHPR*AELFPT
Trigger: GGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCGT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTCCCCTCTGAGCTCTaGCTTCACCGACGCTCCATC +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILPSEL*LHRRSI
Trigger: GATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGAG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCTCCCCTCTGAGCTCTaGCTTCACCGACGCTCCATC +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSLPSEL*LHRRSI
Trigger: GATGGAGCGTCGGTGAAGCAAGAGCTCAGAGGGGAG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCAGGCCGTGGGAGGGTaGTCAGTTGCTCCATGGTAC +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSQAVGG*SVAPWY
Trigger: GTACCATGGAGCAACTGACAACCCTCCCACGGCCTG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATACTCAGCAGCTCCAGATaGGGCCTGTCCCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYILSSSR*GLSPKL
Trigger: GAGCTTTGGGGACAGGCCCAATCTGGAGCTGCTGAG...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCAGCGTCTCCCGCTGGTaGCGCAGCGCGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTISVSRW*RSAICL
Trigger: GAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCT...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATAAGAATCACGGGTAGGTaGTCCGCATCCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIRITGR*SASSWG
Trigger: GCCCCAGGAGGATGCGGACAACCTACCCGTGATTCT...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGAGACTCTGCCTTCTaGGCTGTCCTTCGAGGGACC +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRDSAF*AVLRGT
Trigger: GGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCCTGTGGGCCAGCTGCTaGAGGACCACCAGACGGCGG +
Preference number: 5 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTILWASC*RTTRRR
Trigger: CCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAG...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCCTGGGTCTCCTCCTaGGCACATCTCGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLPWVSS*AHLGIW
Trigger: CCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGTCTGACAGGTCTGAGTaGCGGCCGTGGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQSDRSE*RPWSTR
Trigger: CCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGA...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGGAGGCCTGGGGCCCATaGTTGCTGAGAAGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQEAWGP*LLRSRL
Trigger: CAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTC...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCTGATTTCCAAGCACTaGGGGGAAAGGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHLISKH*GERQLA
Trigger: GGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTCTCCAGCATCAGGATaGGGCGACATTGACACGGGG +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSSPASG*GDIDTG
Trigger: CCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATCCGACTCAGCTTTCTaGGAGCGGCGGGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVSDSAF*ERRGLG
Trigger: TCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGGGGCCCTGGGGACCCTaGTGTGGTGCAGCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LESNEQNKANPTPLSAPLGPWGP*CGAAPV
Trigger: GACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCAGGAGCTGCTTCCCCTaGGAGAAGAAACCCCACACC +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLRSCFP*EKKPHT
Trigger: GGTGTGGGGTTTCTTCTCCAAGGGGAAGCAGCTCCT...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCAGGAGCTGCTTCCCCTaGGAGAAGAAACCCCACACC +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSRSCFP*EKKPHT
Trigger: GGTGTGGGGTTTCTTCTCCAAGGGGAAGCAGCTCCT...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS GCA 90 bp CCTTCACCTCTGGTACCTGCACAGCTCTGTCAGCTCTTGCCAGCCTaGATGTCTTCCCTTCCTCAAACTCCCACTTGCTGCCCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PSPLVPAQLCQLLPA*MSSLPQTPTCCPEP
Trigger: AGGCTCCGGGCAGCAAGTGGGAGTTTGAGGAAGGGAAGACATGCAGGCTGGCAAGAGCTGACAGAGCTGTGCAGGTACCAGAGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 90 bp CCATCTGCCTCATGGTACCCAAATGCCAGGGGCTGGGCATCTCCGTaGCAAGCCAGAGAGCCTAGACCTCTGAGCATAGCAAGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PSASWYPNARGWASP*QAREPRPLSIARRD
Trigger: GTCCCTTCTTGCTATGCTCAGAGGTCTAGGCTCTCTGGCTTGGCACGGAGATGCCCAGCCCCTGGCATTTGGGTACCATGAGGCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585149.1
CDS CCA 90 bp GACTTGGCCCCATTCTCCCTGATGCTGTTGCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAACCCAGCTCCTCTTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DLAPFSLMLLPATCF*KEQVLEPSSSSSSS
Trigger: GGAGGAGGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp TTCCACCAACTAATCCAGGCATGTCTTCCAGGCAGTCTCCAGCCCTaGAGGACTCAGGAGACAAGGGACACTGGCCAGGTCTTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: FHQLIQACLPGSLQP*RTQETRDTGQVFGA
Trigger: AGCCCCGAAGACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCCTGGAAGACATGCCTGGATTAGTTGGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 90 bp CTGGCTTCCAAAGGCACCTGGGAGGTATGGAGACCACCCCCAGGGTaGGAGTGTCCTGAAACAGGGACTTTGATTGGCCACAGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LASKGTWEVWRPPPG*ECPETGTLIGHRCE
Trigger: CTCACACCTGTGGCCAATCAAAGTCCCTGTTTCAGGACACTCCCACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp AAGCCCGCCCAGACGGCGCTCCTTAGTGATCTAAGGCCAGGGAGCTaGGAGAACAGAGAAGCCACCAGAAAGCCCCCTACACCTATGTTC +
Preference number: 5 (lower is better)
Translates to: KPAQTALLSDLRPGS*ENREATRKPPTPMF
Trigger: GAACATAGGTGTAGGGGGCTTTCTGGTGGCTTCTCTGTTCTCCCAGCTCCCTGGCCTTAGATCACTAAGGAGCGCCGTCTGGGCGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp TCTGAGCATAGCAAGAAGGGACCCACCCCCACTCCCAGGGTACAGTaGGCAGGGCTATACCTTCTGCCCATCAGCGTAGATGGCATAGCC +
Preference number: 5 (lower is better)
Translates to: SEHSKKGPTPTPRVQ*AGLYLLPISVDGIA
Trigger: GGCTATGCCATCTACGCTGATGGGCAGAAGGTATAGCCCTGCCCACTGTACCCTGGGAGTGGGGGTGGGTCCCTTCTTGCTATGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585149.1
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCGTCTCCTTTGGGCTaGGAACTCTCCTCAGACCTC +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSPSPLG*ELSSDL
Trigger: GAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGG...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCATTTCTTCCGCTTCTaGCTGAGCTCCGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSHFFRF*LSSDSS
Trigger: GCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCATGGCATGGGCCAAGTaGCTATTGCCGGGCACCCAG +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSMAWAK*LLPGTQ
Trigger: CTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCAT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTCTCTCTGGAAGGGCTaGCAGGGGGTGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYSLWKG*QGVLLE
Trigger: CTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSFSLML*PATCFW
Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGTCTCCAGCATCAGGATaGGGCGACATTGACACGGGG +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLSPASG*GDIDTG
Trigger: CCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGA...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ACTAGTAGACGAGGTGGGTGGACCAGGACGCGAGGGTCCTGGGTCCAGTCCTGGCCTGGCTCAGTGACCTaGGTCAAGTTACATACTCAC +
Preference number: 5 (lower is better)
Translates to: TSRRGGWTRTRGSWVQSWPGSVT*VKLHTH
Trigger: GTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGG...CCAGGACTGGACCCAGGACCCTCGCGTCCTGGTCCACCCACCTCGTCTACTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS TCA 90 bp GGAGGGAGGAGGGAAGACCCAGCTGGTGTTTGGAATTCTGAGCCCTaGTGGCGAATCAGTCACCTTCAGGATCTGACCCTCTCGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GGRREDPAGVWNSEP*WRISHLQDLTLSEG
Trigger: CCCTTCCGAGAGGGTCAGATCCTGAAGGTGACTGATTCGCCATCAGGGCTCAGAATTCCAAACACCAGCTGGGTCTTCCCTCCTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578486.1
CDS GCA 90 bp GTGAGGGTGCGTGTGTGTGTCTCCAGGTCTGTCCGTGCAGGTCAATaGTGTCTCATGTGTTGGGAAGATGGGTGCCCCCACTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VRVRVCVSRSVRAGQ*CLMCWEDGCPHFCV
Trigger: CACACAGAAGTGGGGGCACCCATCTTCCCAACACATGAGACAGCATTGACCTGCACGGACAGACCTGGAGACACACACACGCACCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp GGGCTTGGAACTCTCCTCAGACCTCAGTTCTTGAAGCTGCAGAGCTaGCGGAGGAGTATCAGCGATGCTTGGGGCTGCACTGCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: GLGTLLRPQFLKLQS*RRSISDAWGCTARF
Trigger: GAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 90 bp TCTGTTGCCTTGGCCCCATTCTCCCTGATGCTGTTGCCAGCAACCTaGTTCTGGAAGGAGCAAGTCCTGGAACCCAGCTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVALAPFSLMLLPAT*FWKEQVLEPSSSSS
Trigger: GGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGGCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582679.1
CDS CCA 90 bp CTACGCAGCAGGGTTCAAGGCAGGCTCCAAGGCTCTGCTAGAGTCTaGGTAAGTGGGAGCACCCCAGACACAACAATTGCTCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LRSRVQGRLQGSARV*VSGSTPDTTIAQGQ
Trigger: CTGACCCTGAGCAATTGTTGTGTCTGGGGTGCTCCCACTTACCCAGACTCTAGCAGAGCCTTGGAGCCTGCCTTGAACCCTGCTGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTAGAGTTGCCAGTTGTTaGTGTGTGTGTGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSRVASC*CVCVWV
Trigger: CACCCACACACACACACACAAACAACTGGCAACTCT...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATCCGTCTCCTTTGGGCTaGGAACTCTCCTCAGACCTC +
Preference number: 5 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDPSPLG*ELSSDL
Trigger: GAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGG...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCATTTCTTCCGCTTCTaGCTGAGCTCCGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: GRQDQDSQSHQGAQAPFSHFFRF*LSSDSS
Trigger: GCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATG...GGAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATGCTGAACTGCTCGGTTaGGCTGCGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDAELLG*AAALFF
Trigger: GAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGC...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGGAGGTCAAGGTCTTaGGGGCCAGACCCCCGGCAA +
Preference number: 5 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGRSRS*GPDPRQ
Trigger: TTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGGCTCGGAAGACTTaGGGGTGCAGCGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPQARKT*GCSAQG
Trigger: CCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCTG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGAGACTCTGCCTTCTaGGCTGTCCTTCGAGGGACC +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRDSAF*AVLRGT
Trigger: GGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGCCTTCCCACACTGCTTaGGCCCCCGCTACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LESNEQNKANPTPLSAPLPSHTA*APATAA
Trigger: GGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGG...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCTTCTCCAGCACGGCCTaGGGTGGCGCCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLFSSTA*GGAPGP
Trigger: GGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGAA...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATCCTCGTGGGACCCTTTaGCCATCTCTCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYPRGTL*PSLWKG
Trigger: GCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGG...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAGGCACATCTCGGTATTaGGCGCCTGCTGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGGTSRY*APAGPV
Trigger: CACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCC...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGCACATCTCGGTATTaGGCGCCTGCTGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKGTSRY*APAGPV
Trigger: CACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCC...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTACCCTGGGTCTCCTCCTaGGCACATCTCGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVPWVSS*AHLGIW
Trigger: CCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGG...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GPGDPCVVQPQSCCSLYIFSLML*PATCFW
Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...TATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCCTGATTTCCAAGCACTaGGGGGAAAGGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSLISKH*GERQLA
Trigger: GGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAG...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGGCTTGGGGCCTGAATaGGCCTTCGGAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRGLGPE*AFGGPL
Trigger: CAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATCAGGATTGGGCGACATaGACACGGGGTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHQDWAT*TRGHSQ
Trigger: TTGACTATGACCCCGTGTCAATGTCGCCCAATCCTG...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTAAGCCATCGGCATCCTaGTCCCCAAACACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSKPSAS*SPNTFR
Trigger: CCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTT...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTTGGAGCGGCGGGGCTaGGGAGGAGGCCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFLERRG*GGGPVV
Trigger: CACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAAGGAGCTGCTTCCCCTaGGAGAAGAAACCCCACACC +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVRSCFP*EKKPHT
Trigger: GGTGTGGGGTTTCTTCTCCAAGGGGAAGCAGCTCCT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCTGGCCCCAGGGTCTTaGGGGGCGGGACCTTACAGG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFLAPGS*GAGPYR
Trigger: CCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCAG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTGGCCCCAGGGTCTTaGGGGGCGGGACCTTACAGG +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLAPGS*GAGPYR
Trigger: CCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS GCA 90 bp TGTTCCCACCTTCACCTCTGGTACCTGCACAGCTCTGTCAGCTCTTaGCAGCCTGCATGTCTTCCCTTCCTCAAACTCCCACTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: CSHLHLWYLHSSVSS*QPACLPFLKLPLAA
Trigger: GGCAGCAAGTGGGAGTTTGAGGAAGGGAAGACATGCAGGCTGGCAAGAGCTGACAGAGCTGTGCAGGTACCAGAGGTGAAGGTGGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp GGAGCAGGGAGGGGGAGGGATGACTCTTCATGCAAATCTGGCTCATaGCAAGCTCTCCTTCGCCATTCCCTGGACTACAGTGGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: GAGRGRDDSSCKSGS*QALLRHSLDYSGKA
Trigger: AGCTTTCCCACTGTAGTCCAGGGAATGGCGAAGGAGAGCTTGCCATGAGCCAGATTTGCATGAAGAGTCATCCCTCCCCCTCCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACTGCTGCTCTTTCGCTaGCTGGGTGGCTGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGLLLFR*LGGWAG
Trigger: ACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGGCCTCTCAGGGCCTCTTCTGCCTGCAGGATGGGCCACAGCTTCACTCCTTCTCTGCCCATTTCAGAGTaGCCAGTTGTTTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GPLRASSACRMGHSFTPSLPISE*PVVCVC
Trigger: ACACACACAAACAACTGGCAACTCTGAAATGGGCAG...AGAAGGAGTGAAGCTGTGGCCCATCCTGCAGGCAGAAGAGGCCCTGAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGAGCTCCCGTCTCCTTaGGGCTTGGAACTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYELPSP*GLELSS
Trigger: TGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTCTCCTCCAGGCGCTaGGCAATGACCGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLSSRR*AMTASS
Trigger: CGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGGGAGGTCAAGGTCTTaGGGGCCAGACCCCCGGCAA +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFGRSRS*GPDPRQ
Trigger: TTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCCC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTGGGCCTTCCTACAGTaGCTGTGCCCCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPWAFLQ*LCPRPP
Trigger: GGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCCA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGACCCCGCTGGAGCAGTaGCTGTCTCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPTPLEQ*LSPSRA
Trigger: AGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGT...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCCTGGCTCAGTGACCTaGGTCAAGTTACATACTCAC +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLPGSVT*VKLHTH
Trigger: GTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp GGCACTGAGTATATACATATATACAGGCTCCGCCCGCCTGCCCGCTGGGGAGATAAGGCAGCAATCTGCTaGTCCTTGGCCAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GTEYIHIYRLRPPARWGDKAAIC*SLASSA
Trigger: TGCACTGCTGGCCAAGGACAAGCAGATTGCTGCCTT...ATCTCCCCAGCGGGCAGGCGGGCGGAGCCTGTATATATGTATATACTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS TCA 90 bp GAGGAAAGGAGGGAGGAGGGAAGACCCAGCTGGTGTTTGGAATTCTaGGCCCTGATGGCGAATCAGTCACCTTCAGGATCTGACCCTCTC +
Preference number: 5 (lower is better)
Translates to: EERREEGRPSWCLEF*ALMANQSPSGSDPL
Trigger: GAGAGGGTCAGATCCTGAAGGTGACTGATTCGCCATCAGGGCTCAGAATTCCAAACACCAGCTGGGTCTTCCCTCCTCCCTCCTTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578486.1
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTATGTGCATCGGTGTCGTaGTGTGTCTGTCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVCASVS*CVCQCL
Trigger: CAGACACTGACAGACACACAACGACACCGATGCACA...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCCTGCCCATTTCAGAGTaGCCAGTTGTTTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLLPISE*PVVCVC
Trigger: ACACACACAAACAACTGGCAACTCTGAAATGGGCAG...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp TTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCTGGGAGGGTTGTCAGTaGCTCCATGGTACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: LIPSECHSVNAEERGLWAWEGCQ*LHGTAK
Trigger: CTTGGCAGTACCATGGAGCAACTGACAACCCTCCCA...GGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCTCTGAATGCCACAGTGTTAACGCAGAAGAACGGGGGCTCTGGGCCCAGTCTGAAGCTCATATTCAGCTaGGCCTTCAGGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLNATVLTQKNGGSGPSLKLIFS*AFRKAS
Trigger: GGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCTT...CAGACTGGGCCCAGAGCCCCCGTTCTTCTGCGTTAACACTGTGGCATTCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCGGTGTAGGGCATGACTaGGGGCTGTTGTGGATGGAC +
Preference number: 5 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIGVGHD*GLLWMD
Trigger: GTCCATCCACAACAGCCCCAAGTCATGCCCTACACC...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCACACGCTCTACAAAATaGGAAGGGACCAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSTRSTK*EGTRPL
Trigger: AAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGACACGCTCTACAAAATaGGAAGGGACCAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PLETKVKVGVQSNYLPPQTRSTK*EGTRPL
Trigger: AAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGT...CTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGATGGCATGGGCCAAGTaGCTATTGCCGGGCACCCAG +
Preference number: 5 (lower is better)
Translates to: LESNEQNKANPTPLSAPLMAWAK*LLPGTQ
Trigger: CTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCAT...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGAGCTGAGCCTCCACTaGGGCCTGATAGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFELSLH*GLIGCA
Trigger: GGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCGAGCTGAGCCTCCACTaGGGCCTGATAGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRELSLH*GLIGCA
Trigger: GGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTC...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTCTGACAGGTCTGAGTaGCGGCCGTGGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFSDRSE*RPWSTR
Trigger: CCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGGTCGGGCTGGGACTaGGCCCCATTCTCCCTGATG +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGSGWD*APFSLM
Trigger: CATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTCATGCTAAAGAGCTTCTaGCTACAGAACTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GKTGSGQPEPSGGTGSFLMLKSF*LQNCWR
Trigger: CCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCAT...GAGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGGCCCTGGGGACCCTTGTGTGGTGCAGCCCCAGTCATGTTGCTCTCTCTACATATGCTAAAGAGCTTCTaGCTACAGAACTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPWGPLCGAAPVMLLSLHMLKSF*LQNCWR
Trigger: CCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCAT...ATGTAGAGAGAGCAACATGACTGGGGCTGCACCACACAAGGGTCCCCAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGCCTGGGGCCCATTGTaGCTGAGAAGTCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFAWGPL*LRSRLQ
Trigger: CTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGGCCTTCCTACAGTaGCTGTGCCCCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWAFLQ*LCPRPP
Trigger: GGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCGGGAGAGTGGCTCCTaGGCTCTGCCCGTCGCACTG +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRESGS*ALPVAL
Trigger: CAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATAAGCCATCGGCATCCTaGTCCCCAAACACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYKPSAS*SPNTFR
Trigger: CCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTT...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCTTGGAGCGGCGGGGCTaGGGAGGAGGCCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GSVKLSPTTAKETCKDTLLERRG*GGGPVV
Trigger: CACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAA...GAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGTCCGACTCAGCTTTCTaGGAGCGGCGGGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPSDSAF*ERRGLG
Trigger: TCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGA...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCTGGCCCCAGGGTCTTaGGGGGCGGGACCTTACAGG +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSLAPGS*GAGPYR
Trigger: CCTGTAAGGTCCCGCCCCCAAAGACCCTGGGGCCAG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTGGGAGGAGGCCCAGTaGTGTGGGCTGAGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFWEEAQ*CGLSPQ
Trigger: TTGAGGGCTCAGCCCACACAACTGGGCCTCCTCCCA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580669.6
CDS-3UTR CAA 90 bp CCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAGAGTTGCCAGTTGTTaGTGTGTGTGTGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PWRPRSRWGFSQTISHHSRVASC*CVCVWV
Trigger: CACCCACACACACACACACAAACAACTGGCAACTCT...GCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCCTCAGCAGCTCCAGATaGGGCCTGTCCCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRLSSSR*GLSPKL
Trigger: GAGCTTTGGGGACAGGCCCAATCTGGAGCTGCTGAG...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAACTCTCCTCCAGGCGCTaGGCAATGACCGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LHQGSLIPSECHSVNAEELSSRR*AMTASS
Trigger: CGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAG...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCAGAATCACGGGTAGGTaGTCCGCATCCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRRITGR*SASSWG
Trigger: GCCCCAGGAGGATGCGGACAACCTACCCGTGATTCT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ACATGCAAAGACACACTCACCCCTCAGAGGGTGGGGGATGGAGTGGATCGGGTAATTCTCATTCTGCGCTaGTCTCAGCTGCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TCKDTLTPQRVGDGVDRVILILR*SQLQFQ
Trigger: CTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAAT...TACCCGATCCACTCCATCCCCCACCCTCTGAGGGGTGAGTGTGTCTTTGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCTGTCGGAGTGGGAGGAGTaGGAGAGAGACTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LESNEQNKANPTPLSAPLSEWEE*ERDSAF
Trigger: GAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGA...CAGCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACATGACTTGGGGCTGTaGTGGATGGACTCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKHDLGL*WMDSEW
Trigger: CCACTCCGAGTCCATCCACAACAGCCCCAAGTCATG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCATGGCATGGGCCAAGTaGCTATTGCCGGGCACCCAG +
Preference number: 5 (lower is better)
Translates to: NLNPMSKIRQTQLRFRPRMAWAK*LLPGTQ
Trigger: CTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCAT...GCGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTACCCCGCTGGAGCAGTaGCTGTCTCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSTPLEQ*LSPSRA
Trigger: AGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGCCTCCACGTCCATATaGGGGGAACTCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQASTSI*GELSWG
Trigger: CCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp AGGGAAGACAGGATCAGGACAGCCAGAGCCATCAGGGGGCACAGGCTCCTTTCTGCAGCCCCAGTCATGTaGCTCTCTCTACATATATCT +
Preference number: 5 (lower is better)
Translates to: REDRIRTARAIRGHRLLSAAPVM*LSLHIS
Trigger: AGATATATGTAGAGAGAGCAACATGACTGGGGCTGC...AGAAAGGAGCCTGTGCCCCCTGATGGCTCTGGCTGTCCTGATCCTGTCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPRVGPT*AWPFSF
Trigger: GAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCT...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS TCA 90 bp TATTGCAGGGCTGTGGCAGTATGTGATGCTGTCCCTGGTTGTATCTaGGTGTGTCAGTGTCGTGCAGCTGTGTGCATCGGTGTCGTTGTG +
Preference number: 5 (lower is better)
Translates to: YCRAVAVCDAVPGCI*VCQCRAAVCIGVVV
Trigger: CACAACGACACCGATGCACACAGCTGCACGACACTGACACACTCAGATACAACCAGGGACAGCATCACATACTGCCACAGCCCTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 90 bp TGTGTGTGTGTGTGGGTGTCTGTATTGCAGGGCTGTGGCAGTATGTaGTGCTGTCCCTGGTTGTATCTGAGTGTGTCAGTGTCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CVCVWVSVLQGCGSM*CCPWLYLSVSVSCS
Trigger: GCTGCACGACACTGACACACTCAGATACAACCAGGGACAGCATCACATACTGCCACAGCCCTGCAATACAGACACCCACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 90 bp GCTCATCAGTGTCTGAAATCAGCTCACTCCTGGATGCTAATTTGCTaGCTGCTCAGGGACCTGGTCTTTGTTCCCCACAGTCTCCCCGAC +
Preference number: 5 (lower is better)
Translates to: AHQCLKSAHSWMLIC*LLRDLVFVPHSLPD
Trigger: GTCGGGGAGACTGTGGGGAACAAAGACCAGGTCCCTGAGCAGTCAGCAAATTAGCATCCAGGAGTGAGCTGATTTCAGACACTGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583624.1
CDS GCA 90 bp CACATGTCACCTCCCTCCAAAAACATGGAGCGCAAGGACAAGGACTaGTTAGAAGCAGCTGTCACTGCCCAGGAAGGTAGCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: HMSPPSKNMERKDKD*LEAAVTAQEGSFYS
Trigger: GCTGTAGAAGCTACCTTCCTGGGCAGTGACAGCTGCTTCTAAGCAGTCCTTGTCCTTGCGCTCCATGTTTTTGGAGGGAGGTGACATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp AGGAAGTTGGATGGAACCAGGCCCCTTTGTCCATTTAATTCCCCCTaGAGAGAAGAGGCCGGTGAGACTGAGATCAGGAAAGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RKLDGTRPLCPFNSP*REEAGETEIRKEAL
Trigger: CAGAGCCTCTTTCCTGATCTCAGTCTCACCGGCCTCTTCTCTCCAGGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTGGGCCAAGTTGCTATaGCCGGGCACCCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQWAKLL*PGTQVI
Trigger: GATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATGGGCCAAGTTGCTATaGCCGGGCACCCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTWAKLL*PGTQVI
Trigger: GATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACCTCGTGGGACCCTTTaGCCATCTCTCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTPRGTL*PSLWKG
Trigger: GCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGG...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAAAGCCATCGGCATCCTaGTCCCCAAACACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKKPSAS*SPNTFR
Trigger: CCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTT...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGCCTCCACGTCCATATaGGGGGAACTCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEASTSI*GELSWG
Trigger: CCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTGCCTCCACGTCCATATaGGGGGAACTCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSASTSI*GELSWG
Trigger: CCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGC...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCAGGAGCTGCTTCCCCTaGGAGAAGAAACCCCACACC +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFRSCFP*EKKPHT
Trigger: GGTGTGGGGTTTCTTCTCCAAGGGGAAGCAGCTCCT...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS TCA 90 bp CCATTCCCTGGACTACAGTGGGAAAGCTGGGTCAGCTCCAGTATTTaGGACAAAGGAGCACTGTCTGATTATGGTCAAGTGGGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: PFPGLQWESWVSSSI*DKGALSDYGQVGVD
Trigger: GTCCACCCCCACTTGACCATAATCAGACAGTGCTCCTTTGTCTCAAATACTGGAGCTGACCCAGCTTTCCCACTGTAGTCCAGGGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp ACCATTCCACACCCCTGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCAAGCTCATATTCAGCTaGGCCTTCAGGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TIPHPWRPRSRWGFSQTIKLIFS*AFRKAS
Trigger: GGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCTT...GATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCAGGGGTGTGGAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCCATGTGCTTCAGCACTaGCTCCAGGCTCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFHVLQH*LQALQL
Trigger: AAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACATG...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GAACTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCGCTTTCGGCCCCGCATGTGCTTCAGCACTaGCTCCAGGCTCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: ELESNEQNKANPTPLSAPHVLQH*LQALQL
Trigger: AAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACATG...CGGGGCCGAAAGCGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp GTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACATCGGAGTGGGAGGAGTaGGAGAGAGACTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VGVQSNYLPPQQRKHAKTSEWEE*ERDSAF
Trigger: GAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGA...TGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGGGTGTAGGGCATGACTaGGGGCTGTTGTGGATGGAC +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQGVGHD*GLLWMD
Trigger: GTCCATCCACAACAGCCCCAAGTCATGCCCTACACC...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTTGGGCCAAGTTGCTATaGCCGGGCACCCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSWAKLL*PGTQVI
Trigger: GATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCA...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp TGGAGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAACAGGATTGGGCGACATaGACACGGGGTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: WRPRSRWGFSQTISHHSKQDWAT*TRGHSQ
Trigger: TTGACTATGACCCCGTGTCAATGTCGCCCAATCCTG...TTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGTCTCCAGCATCAGGATaGGGCGACATTGACACGGGG +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQSPASG*GDIDTG
Trigger: CCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGA...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATGCAGCCCCAGTCATGTaGCTCTCTCTACATATATCT +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYAAPVM*LSLHIS
Trigger: AGATATATGTAGAGAGAGCAACATGACTGGGGCTGC...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTAGGGTGGGGCCCACTTaGGCTTGGCCTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSRVGPT*AWPFSF
Trigger: GAAGGAGAAAGGCCAAGCCAAAGTGGGCCCCACCCT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS CCA 90 bp CTTCATGCAAATCTGGCTCATGGCAAGCTCTCCTTCGCCATTCCCTaGACTACAGTGGGAAAGCTGGGTCAGCTCCAGTATTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: LHANLAHGKLSFAIP*TTVGKLGQLQYLRQ
Trigger: TTGTCTCAAATACTGGAGCTGACCCAGCTTTCCCACTGTAGTCCAGGGAATGGCGAAGGAGAGCTTGCCATGAGCCAGATTTGCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS-3UTR CAA 90 bp AGTGGATCGGGTAACGGCGGAGAACCCCTACCCCACTCTGAACAGGGAATGTATTTTCAGAGTTGCCAGTaGTTTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SGSGNGGEPLPHSEQGMYFQSCQ*FVCVCV
Trigger: CACACACACACACACAAACAACTGGCAACTCTGAAA...ATACATTCCCTGTTCAGAGTGGGGTAGGGGTTCTCCGCCGTTACCCGATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCGCTTCTGGATTCTCATaGGGACCCTCAAAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFASGFS*GPSKGL
Trigger: CAACCCCTTTGAGGGTCCCAATGAGAATCCAGAAGC...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AGACCAAGGTCAAGGTGGGGGTTCAGTCAAACTATCTCCCACCACAGCAAAGGACCTGGCTCAGTGACCTaGGTCAAGTTACATACTCAC +
Preference number: 5 (lower is better)
Translates to: RPRSRWGFSQTISHHSKGPGSVT*VKLHTH
Trigger: GTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGG...TCCTTTGCTGTGGTGGGAGATAGTTTGACTGAACCCCCACCTTGACCTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000581675.5
CDS CCA 90 bp CAGTTGTTTGTGTGTGTGTGTGTGGGTGTCTGTATTGCAGGGCTGTaGCAGTATGTGATGCTGTCCCTGGTTGTATCTGAGTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: QLFVCVCVGVCIAGL*QYVMLSLVVSECVS
Trigger: ACTGACACACTCAGATACAACCAGGGACAGCATCACATACTGCCACAGCCCTGCAATACAGACACCCACACACACACACACAAACAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAAGTGTGGGTGTCTGTATaGCAGGGCTGTGGCAGTATG +
Preference number: 5 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEVWVSV*QGCGSM
Trigger: CATACTGCCACAGCCCTGCAATACAGACACCCACAC...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTATGCTGTCTCATGTGTaGGGAAGATGGGTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSMLSHV*GRWVPP
Trigger: TGGGGGCACCCATCTTCCCAACACATGAGACAGCAT...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp CTTCACCAAGGCTCTTTGATTCCCTCTGAATGCCACAGTGTTAACGCAGAAGAATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LHQGSLIPSECHSVNAEEFSLML*PATCFW
Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...TTCTTCTGCGTTAACACTGTGGCATTCAGAGGGAATCAAAGAGCCTTGGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGATTCTCATTCTGCGCTaGTCTCAGCTGCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQILILR*SQLQFQ
Trigger: CTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAAT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp ATCCTTAAGGAGCCATTTAGCTCTGACCTTCACCAAGGCTCTTTGATTCCCTCTCAGGATTGGGCGACATaGACACGGGGTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: ILKEPFSSDLHQGSLIPSQDWAT*TRGHSQ
Trigger: TTGACTATGACCCCGTGTCAATGTCGCCCAATCCTG...AGAGGGAATCAAAGAGCCTTGGTGAAGGTCAGAGCTAAATGGCTCCTTAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS-3UTR CAA 90 bp AGTCCTGGCTCAGTGACCTTGGTCAAGTTACATACTCACTGTGGGCTCAGTTTCTTTCAGAGTTGCCAGTaGTTTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SPGSVTLVKLHTHCGLSFFQSCQ*FVCVCV
Trigger: CACACACACACACACAAACAACTGGCAACTCTGAAA...GAAACTGAGCCCACAGTGAGTATGTAACTTGACCAAGGTCACTGAGCCAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS-3UTR CAA 90 bp AAACTATCTCCCACCACAGCAAAGGAAACATGCAAAGACACACTCACCCCTCAGATGCTAAAGAGCTTCTaGCTACAGAACTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KLSPTTAKETCKDTLTPQMLKSF*LQNCWR
Trigger: CCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCAT...CTGAGGGGTGAGTGTGTCTTTGCATGTTTCCTTTGCTGTGGTGGGAGATAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 90 bp GAGTTGGAGGTAAATCATGCATCTGATCACCCTAACAGGTCACAATaGAGAGGACAAGGGTGGGAAGCCTATTATTACTGGTGGCATTAC +
Preference number: 5 (lower is better)
Translates to: ELEVNHASDHPNRSQ*RGQGWEAYYYWWHY
Trigger: GTAATGCCACCAGTAATAATAGGCTTCCCACCCTTGTCCTCTGCATTGTGACCTGTTAGGGTGATCAGATGCATGATTTACCTCCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 90 bp AGGTCACAATGCAGAGGACAAGGGTGGGAAGCCTATTATTACTGGTaGCATTACAGTGTCACCCTGGCACCAGTAATAATTATGATATTA +
Preference number: 5 (lower is better)
Translates to: RSQCRGQGWEAYYYW*HYSVTLAPVIIMIL
Trigger: TAATATCATAATTATTACTGGTGCCAGGGTGACACTGTAATGCCACCAGTAATAATAGGCTTCCCACCCTTGTCCTCTGCATTGTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp GGGGGCCAGGACGGCGGGAGCGGGAGCGTCTCCCGCTaGTTGCGCAGCGCGATCTGCCTCTGCAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: GGQDGGSGSVSR*LRSAICLCSRS
Trigger: GCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 72 bp GGCCAGGACGGCGGGAGCGGGAGCGTCTCCCGCTGGTaGCGCAGCGCGATCTGCCTCTGCAGCCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: GQDGGSGSVSRW*RSAICLCSRST
Trigger: GGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp GCCAGGACGGCGGGAGCGGGAGCGTCTCCCGCTGGTTaGGCAGCGCGATCTGCCTCTGCAGCCGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: ARTAGAGASPAG*AARSASAAAAP
Trigger: AGGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp CCGACAGACCCGCACCTTCTCCGCCCGGCCACCAGGTaGCCCTGCGCAGGGGTGGGCCCTACTCTCCAAGGC +
Preference number: 6 (lower is better)
Translates to: PTDPHLLRPATR*PCAGVGPTLQG
Trigger: GCCTTGGAGAGTAGGGCCCACCCCTGCGCAGGGCCACCTGGTGGCCGGGCGGAGAAGGTGCGGGTCTGTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp GCCGGACAGGCCTCTCCTGCAGTCCACTCGGCCTCCTaGTTGGCCAGTGAGGGAGCTGCGGGGCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: AGQASPAVHSAS*LASEGAAGPGS
Trigger: GGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp TCCGGCCCGGGCACCCACCGCCAAGCAACAGCGCAGTaGGTCAGAGCTGCCCCGGCTAGTCAGGGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: SGPGTHRQATAQ*VRAAPASQGLD
Trigger: GTCCAGGCCCTGACTAGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTGGCGGTGGGTGCCCGGGCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp TCTGGGGGCCCCTCCGCCCAGAGCCGTCCTGCCCTCTaGCCTCTCCGGTCTCTGTTGCCCGGGAGAGTGGCT +
Preference number: 6 (lower is better)
Translates to: SGGPSAQSRPAL*PLRSLLPGRVA
Trigger: AGCCACTCTCCCGGGCAACAGAGACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCGGAGGGGCCCCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000578486.1
ENST00000580669.6
CDS TCA 72 bp GCTCCCAGGCCAGCACCACGCTGTGGGCCAGCTGCTTaGGGACCACCAGACGGCGGGGGTAAGGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: APRPAPRCGPAA*GPPDGGGKARQ
Trigger: CTGCCGTGCCTTACCCCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGCCTGGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp TCAGCAGATGTGGCTGTCAACCGATGGACCCGCAGCTaGCTGGGCACCACTCCGGCCCGGGCACCCACCGCC +
Preference number: 6 (lower is better)
Translates to: SADVAVNRWTRS*LGTTPARAPTA
Trigger: GGCGGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 72 bp GGGGCATCAGGTGGGCCTGCTGGGAGTGTGGTGAACTaGAGGGTGGCAGCCCGCTGCTCCAGCCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GASGGPAGSVVN*RVAARCSSLSQ
Trigger: CTGGGAGAGGCTGGAGCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAGGCCCACCTGATGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000585149.1
CDS GCA 72 bp CGGTCTCTGTTGCCCGGGAGAGTGGCTCCTTGGCTCTaGCCGTCGCACTGCGGCCTCTCCGCTCTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: RSLLPGRVAPWL*PSHCGLSALVP
Trigger: GGGAACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp CCGGGATGGAGTCCGCCGACTCCCCGTGGGGCGACATaGTGCGCACGACCACCTCACGACACACCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PGWSPPTPRGAT*CARPPHDTPAA
Trigger: TGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp CCTCTCCGGTCTCTGTTGCCCGGGAGAGTGGCTCCTTaGCTCTGCCCGTCGCACTGCGGCCTCTCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: PLRSLLPGRVAP*LCPSHCGLSAL
Trigger: CAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GCAGTGCTTGGCCTGAGGACTCGGACACCTCTCTTCTaGGGGCCCCTCCGCCCAGAGCCGTCCTGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: AVLGLRTRTPLF*GPLRPEPSCPL
Trigger: CAGAGGGCAGGACGGCTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000578486.1
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp GGGTGGGAGTGTCCTGACTCTCAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGCCTGCCTCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GWECPDSQPGVS*VPCPGRLPQAQ
Trigger: CTGGGCCTGAGGCAGGCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTGAGAGTCAGGACACTCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577871.1
CDS CAA 72 bp GCCTCTCCGGTCTCTGTTGCCCGGGAGAGTGGCTCCTaGGCTCTGCCCGTCGCACTGCGGCCTCTCCGCTCT +
Preference number: 6 (lower is better)
Translates to: ASPVSVARESGS*ALPVALRPLRS
Trigger: AGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp GAGGCTCGCCCAGGCCCTCCGGTGATGGGCTCAGACTaGGCTCGTCCCCTGCATCCTCCTCCTCAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: EARPGPPVMGSD*ARPLHPPPQVW
Trigger: CCAGACCTGAGGAGGAGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCACCGGAGGGCCTGGGCGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp AGGAGCGAGGGTGTCCCTGTGGGGGTAGGGAGGATGTaGAGAGGCCACCGACAGCTGCGCCTGGGTGAGGGT +
Preference number: 6 (lower is better)
Translates to: RSEGVPVGVGRM*RGHRQLRLGEG
Trigger: ACCCTCACCCAGGCGCAGCTGTCGGTGGCCTCTGCACATCCTCCCTACCCCCACAGGGACACCCTCGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CTGAGCCGAGCCTGTTCATGCTCCACCTCCAGCTGCTaGCGCCGCTGGGCCACCTCCCGCATGTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LSRACSCSTSSC*RRWATSRMCFS
Trigger: GCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000583624.1
CDS GCA 72 bp AGGCTGAGCCGAGCCTGTTCATGCTCCACCTCCAGCTaGTGCCGCCGCTGGGCCACCTCCCGCATGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RLSRACSCSTSS*CRRWATSRMCF
Trigger: GAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000583624.1
CDS CCA 72 bp GTGATAGGAGCCGGGATGGAGTCCGCCGACTCCCCGTaGGGCGACATGGTGCGCACGACCACCTCACGACAC +
Preference number: 6 (lower is better)
Translates to: VIGAGMESADSP*GDMVRTTTSRH
Trigger: GTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGGCTCCTATCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GACAGGCCTCTCCTGCAGTCCACTCGGCCTCCTGCTTaGCCAGTGAGGGAGCTGCGGGGCCAGGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: DRPLLQSTRPPA*PVRELRGQGPS
Trigger: AGAAGGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp CACAGGGCCCCCTCACCTGCGTCAGCCACCAGGTGTTaGCAGCTGGCGAGATGGCCTGAGGGTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: HRAPSPASATRC*QLARWPEGQGH
Trigger: GTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAGGGGGCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS TCA 72 bp CAGCTTGCTCTGCAGGCCCTGGCTCTTGCGAAGGGCTaGGTCCCTCTCCTGTGTCACCCCCAGGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: QLALQALALAKG*VPLLCHPQELA
Trigger: GGCCAGCTCCTGGGGGTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp GGCTCCTCGCAGGGACTAGCTCTGCAGTGCTTGGCCTaGGGACTCGGACACCTCTCTTCTGGGGGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: GSSQGLALQCLA*GLGHLSSGGPS
Trigger: GGAGGGGCCCCCAGAAGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAGAGCTAGTCCCTGCGAGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000578486.1
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp ACCCAGGTGATCTCAGCAGATGTGGCTGTCAACCGATaGACCCGCAGCTGGCTGGGCACCACTCCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: TQVISADVAVNR*TRSWLGTTPAR
Trigger: CCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp CCCCTCTCCCGTGTGGGGCCCAGTCGTCCAGAGGCCTaGGGCCCATTGTTGCTGAGAAGTCGGCTGCAGTGT +
Preference number: 6 (lower is better)
Translates to: PLSRVGPSRPEA*GPLLLRSRLQC
Trigger: ACACTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACTGGGCCCCACACGGGAGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp TCCTCCTCGTTCTCTGACTCTCAGCCTGGGGTGTCCTaGGTTCCCTGTCCAGGCCGCCTGCCTCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SSSFSDSQPGVS*VPCPGRLPQAQ
Trigger: CTGGGCCTGAGGCAGGCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000578511.5
ENST00000580669.6
CDS CCA 72 bp GCATCTACCCCCAACCAGCCAGAGCCAATAGCCGGCTaGCGAGCCCCAGGCCCTTCCCACTCCCTCTTAGGG +
Preference number: 6 (lower is better)
Translates to: ASTPNQPEPIAG*RAPGPSHSLLG
Trigger: CCCTAAGAGGGAGTGGGAAGGGCCTGGGGCTCGCCAGCCGGCTATTGGCTCTGGCTGGTTGGGGGTAGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp CAGACCCTGGGTCTCCTCCTTGGCACATCTCGGTATTaGGCGCCTGCTGGGCCCGTGCTCCCTGGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: QTLGLLLGTSRY*APAGPVLPGWS
Trigger: GCTCCACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CAA 72 bp GGGCCTTCCGACTCAGCTTTCTTGGAGCGGCGGGGCTaGGGAGGAGGCCCAGTTGTGTGGGCTGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: GPSDSAFLERRG*GGGPVVWAEPS
Trigger: TGAGGGCTCAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580669.6
CDS GCA 72 bp TCGGGGCTGACCACTGTCACAGCCCAGCCCCAGCAATaGAGGTTCAGGCGGGCCAGGGTCTCGGGAAGAACA +
Preference number: 6 (lower is better)
Translates to: SGLTTVTAQPQQ*RFRRARVSGRT
Trigger: TGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 72 bp CAGCAGGGCTGTCCACAGCCACCTCAGCCACCATGTTaGAGGGAATGTAGCCTGTCCGGCCCCCACCTTCGC +
Preference number: 6 (lower is better)
Translates to: QQGCPQPPQPPC*RECSLSGPHLR
Trigger: GCGAAGGTGGGGGCCGGACAGGCTACATTCCCTGCAACATGGTGGCTGAGGTGGCTGTGGACAGCCCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS GCA 72 bp GGCAAGGGGGCACTCACCACCCTCAGGTTCGTTTCCTaGAGCTTTCGGGCCCTCTCCTCCAGGCGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GKGALTTLRFVS*SFRALSSRRLA
Trigger: TGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAGGGTGGTGAGTGCCCCCTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS CCA 72 bp GCTTGGGGCTGCACTGCTAGGTTCACCCCCTCGACCTaGAGTCCAGCTATGCCAGGTGGGCAGTGCCCATGG +
Preference number: 6 (lower is better)
Translates to: AWGCTARFTPST*SPAMPGGQCPW
Trigger: CCATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp GACTCCAGCAGCTGCACGGCTCCTTCATGTTCCCTCTaGGCTTCAGCCTGGGCCTGCTGCAGTCTCCGGACC +
Preference number: 6 (lower is better)
Translates to: DSSSCTAPSCSL*ASAWACCSLRT
Trigger: GGTCCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGGAGCCGTGCAGCTGCTGGAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp AGACCCTGGGTCTCCTCCTTGGCACATCTCGGTATTTaGCGCCTGCTGGGCCCGTGCTCCCTGGGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RPWVSSLAHLGI*RLLGPCSLGGA
Trigger: AGCTCCACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp AGTGCACTGGCTGTCTCACTGAGGTCCCGGGCTCGCTaGCGGGCTAGGGCCTTCCGACACAACTCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: SALAVSLRSRAR*RARAFRHNSKL
Trigger: CAGCTTGGAGTTGTGTCGGAAGGCCCTAGCCCGCCAGCGAGCCCGGGACCTCAGTGAGACAGCCAGTGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343736.9
CDS CCA 72 bp CTGGGCCTGGCTGGGCAACTGGCTTCCAAAGGCACCTaGGAGGTATGGAGACCACCCCCAGGGTGGGAGTGT +
Preference number: 6 (lower is better)
Translates to: LGLAGQLASKGT*EVWRPPPGWEC
Trigger: ACACTCCCACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577871.1
ENST00000581692.2
CDS CCA 72 bp CCCCCTCACCTGCGTCAGCCACCAGGTGTTGGCAGCTaGCGAGATGGCCTGAGGGTCAGGGTCACAGCTATC +
Preference number: 6 (lower is better)
Translates to: PPHLRQPPGVGS*RDGLRVRVTAI
Trigger: GATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGGTGAGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp TTCTCCGCCCGGCCACCAGGTGGCCCTGCGCAGGGGTaGGCCCTACTCTCCAAGGCCTTTGTGTTCACACAT +
Preference number: 6 (lower is better)
Translates to: FSARPPGGPAQG*ALLSKAFVFTH
Trigger: ATGTGTGAACACAAAGGCCTTGGAGAGTAGGGCCCACCCCTGCGCAGGGCCACCTGGTGGCCGGGCGGAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp GGCCTTCCGACTCAGCTTTCTTGGAGCGGCGGGGCTTaGGAGGAGGCCCAGTTGTGTGGGCTGAGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: GLPTQLSWSGGA*EEAQLCGLSPQ
Trigger: TTGAGGGCTCAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580669.6
CDS CAA 72 bp CTCCTCAGGTCTGGGCTGGCTCCTTCCCACACTGCTTaGGCCCCCGCTACTGCTGCCACCCCCACCTACACT +
Preference number: 6 (lower is better)
Translates to: LLRSGLAPSHTA*APATAATPTYT
Trigger: AGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp CCTCCTCCTGGGAGCAAGGTGCTGGAGGGTCCTCGTGGGACCCTTTaGCCATCTCTCTGGAAGGGCTTGCAGGGGGTGCTCCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PPPGSKVLEGPRGTL*PSLWKGLQGVLLEA
Trigger: AGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp GCAGTCTCCGGACCTCCTCCTGCTTCTCCCGTAGGCTaGGCCGAGCCTGTTCATGCTCCACCTCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVSGPPPASPVG*AEPVHAPPPAA
Trigger: AGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000583624.1
CDS TCA 72 bp AGGCGGGCCAGGGTCTCGGGAAGAACAGCCTGCCCCTaGCTTCTCCTCCTCCTCGTCCTCCTCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RRARVSGRTACP*LLLLLVLLFLF
Trigger: GAAGAGGAAGAGGAGGACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp GGCCCAGTCGTCCAGAGGCCTGGGGCCCATTGTTGCTaGGAAGTCGGCTGCAGTGTTCTCGGGGATCTGGAG +
Preference number: 6 (lower is better)
Translates to: GPVVQRPGAHCC*EVGCSVLGDLE
Trigger: CTCCAGATCCCCGAGAACACTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp AGACGCCCACTCCACGCGGCCAGCCCACGTACAGTCTaGCCACTACGCAGCAGGGTTCAAGGCAGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: RRPLHAASPRTV*PLRSRVQGRLQ
Trigger: TTGGAGCCTGCCTTGAACCCTGCTGCGTAGTGGTCAGACTGTACGTGGGCTGGCCGCGTGGAGTGGGCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS GCA 72 bp GTGGGAGCTGAGCCTCCACTTGGGCCTGATAGGGTGTaGCAGGCCGTAAGTGGCAGAAGGTGGCCCAGTAGG +
Preference number: 6 (lower is better)
Translates to: VGAEPPLGPDRV*QAVSGRRWPSR
Trigger: CCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 72 bp ATGATCAAGATCCCAGGGGAGGGCCCAGGCTCGATCTaGACATCCAGAGGGGCATCAGGTGGGCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: MIKIPGEGPGSI*TSRGASGGPAG
Trigger: CCCAGCAGGCCCACCTGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCCCTCCCCTGGGATCTTGATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000585149.1
CDS GCA 72 bp GTGCGCACGACCACCTCACGACACACCTGCAGCAGCTaGAGCTGGGACAACTCCACCAGTACACTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: VRTTTSRHTCSS*SWDNSTSTLPA
Trigger: GGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp TGCTCTCTGCTGCTGCTCTTTCGCTTGCTGGGTGGCTaGGCTGGTCCTAAGGAGGCCTGGGTCGATGGGCTG +
Preference number: 6 (lower is better)
Translates to: CSLLLLFRLLGG*AGPKEAWVDGL
Trigger: CAGCCCATCGACCCAGGCCTCCTTAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp CAGGAGCTGCTGGGGGTGATCCCCAGTGGTCCGCTGTaGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QELLGVIPSGPL*SFISGSALCCC
Trigger: GCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGGGATCACCCCCAGCAGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp CCTGATAGGGTGTGCCAGGCCGTAAGTGGCAGAAGGTaGCCCAGTAGGTACTGGGGCTGGCAGGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: PDRVCQAVSGRR*PSRYWGWQVGT
Trigger: AGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GGCCTTCCGACTCAGCTTTCTTGGAGCGGCGGGGCTTaGGAGGAGGCCCAGTTGTGTGGGCTGTGGAGTACA +
Preference number: 6 (lower is better)
Translates to: GLPTQLSWSGGA*EEAQLCGLWST
Trigger: TGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000577871.1
ENST00000578511.5
CDS CCA 72 bp CTCCAGGGTGCAGGGCTGACAGGGCCCAAGAGTTCTTaGAACCTGCCCCTCAGGATGGGTGCCCCCAACTTC +
Preference number: 6 (lower is better)
Translates to: LQGAGLTGPKSS*NLPLRMGAPNF
Trigger: GAAGTTGGGGGCACCCATCCTGAGGGGCAGGTTCCAAGAACTCTTGGGCCCTGTCAGCCCTGCACCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp TGCTCTTTCTCTGGCTCCCCTAGAATCACGGGTAGGTaGTCCGCATCCTCCTGGGGCGTGGCCTCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: CSFSGSPRITGR*SASSWGVASPG
Trigger: CCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAACCTACCCGTGATTCTAGGGGAGCCAGAGAAAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp CTCAGGTTCGTTTCCTGCAGCTTTCGGGCCCTCTCCTCCAGGCGCTaGGCAATGACCGCCAGCTCGGCGTTCTTCCTCTTCAGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: LRFVSCSFRALSSRR*AMTASSAFFLFSLR
Trigger: GCGGAGGCTGAAGAGGAAGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TGCATCCTCCTCCTCAGGTCTGGGCTGGCTCCTTCCCACACTGCTTaGGCCCCCGCTACTGCTGCCACCCCCACCTACACTCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: CILLLRSGLAPSHTA*APATAATPTYTQET
Trigger: AGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp ACTCTGCCTTCTTGGCTGTCCTTCGAGGGACCCCAGTaGGAGTGGCAGGGGCAGGCTCGGAAGACTTTGGGG +
Preference number: 6 (lower is better)
Translates to: TLPSWLSFEGPQ*EWQGQARKTLG
Trigger: CCCCAAAGTCTTCCGAGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CCCCAGTGGTCCGCTGTGGTCCTTTATCTCCGGCTCTaGTCTCTGCTGCTGCTCTTTCGCTTGCTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: PQWSAVVLYLRL*SLLLLFRLLGG
Trigger: GCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAGCGGACCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CAGAGCTGCCGGAGGAGTATCAGCGATGCTTGGGGCTaGACTGCTAGGTTCACCCCCTCGACCTGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: QSCRRSISDAWG*TARFTPSTWSP
Trigger: TGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp AAGCTGCAGAGCTGCCGGAGGAGTATCAGCGATGCTTaGGGCTGCACTGCTAGGTTCACCCCCTCGACCTGG +
Preference number: 6 (lower is better)
Translates to: KLQSCRRSISDA*GCTARFTPSTW
Trigger: CCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp ACGACCACCTCACGACACACCTGCAGCAGCTGCAGCTaGGACAACTCCACCAGTACACTGCCTGCCGTGGGT +
Preference number: 6 (lower is better)
Translates to: TTTSRHTCSSCS*DNSTSTLPAVG
Trigger: ACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp CTGGAGGGTCCTCGTGGGACCCTTTTGCCATCTCTCTaGAAGGGCTTGCAGGGGGTGCTCCTGGAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: LEGPRGTLLPSL*KGLQGVLLEAL
Trigger: AAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GCCTCCTCCTGGGAGCAAGGTGCTGGAGGGTCCTCGTaGGACCCTTTTGCCATCTCTCTGGAAGGGCTTGCA +
Preference number: 6 (lower is better)
Translates to: ASSWEQGAGGSS*DPFAISLEGLA
Trigger: TGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GGCGGGGCTTGGGAGGAGGCCCAGTTGTGTGGGCTGTaGAGTACACAAACGGACCATTCCCTGAGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: GGAWEEAQLCGL*STQTDHSLSPQ
Trigger: TTGAGGGCTCAGGGAATGGTCCGTTTGTGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp GCAAGCTCAAGGAACGAGAACCCAGGAAGCTGGGCCTaGCTGGGCAACTGGCTTCCAAAGGCACCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: ASSRNENPGSWA*LGNWLPKAPGR
Trigger: CCTCCCAGGTGCCTTTGGAAGCCAGTTGCCCAGCCAGGCCCAGCTTCCTGGGTTCTCGTTCCTTGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577871.1
ENST00000581692.2
CDS CCA 72 bp CCTGCGTCAGCCACCAGGTGTTGGCAGCTGGCGAGATaGCCTGAGGGTCAGGGTCACAGCTATCATCCCTCT +
Preference number: 6 (lower is better)
Translates to: PASATRCWQLAR*PEGQGHSYHPS
Trigger: AGAGGGATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGACGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp GTTTCCTGCAGCTTTCGGGCCCTCTCCTCCAGGCGCTaGGCAATGACCGCCAGCTCGGCGTTCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: VSCSFRALSSRR*AMTASSAFFLF
Trigger: GAAGAGGAAGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TCCCTTCTCCCTCCAGGGTGCAGGGCTGACAGGGCCCAAGAGTTCTaGGAACCTGCCCCTCAGGATGGGTGCCCCCAACTTCTCACATGT +
Preference number: 6 (lower is better)
Translates to: SLLPPGCRADRAQEF*EPAPQDGCPQLLTC
Trigger: ACATGTGAGAAGTTGGGGGCACCCATCCTGAGGGGCAGGTTCCAAGAACTCTTGGGCCCTGTCAGCCCTGCACCCTGGAGGGAGAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS TCA 72 bp GTCAGCCACCAGGTGTTGGCAGCTGGCGAGATGGCCTaGGGGTCAGGGTCACAGCTATCATCCCTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: VSHQVLAAGEMA*GSGSQLSSLCR
Trigger: TCTGCAGAGGGATGATAGCTGTGACCCTGACCCTCAGGCCATCTCGCCAGCTGCCAACACCTGGTGGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp CGGGCCTGCATGGAATCCAAGGTAGACTCCAGCAGCTaGACGGCTCCTTCATGTTCCCTCTGGGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: RACMESKVDSSS*TAPSCSLWASA
Trigger: GGCTGAAGCCCAGAGGGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CTGCGGCACTGTTCTTCGAGCTCTCGAACCCGGGCCTaGATGGAATCCAAGGTAGACTCCAGCAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: LRHCSSSSRTRA*MESKVDSSSCT
Trigger: CGTGCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCGGGTTCGAGAGCTCGAAGAACAGTGCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CCATTCACACAGATATGGAAGCCGTGTAGCTCCACTTaGTCAGGAGGCGGCTCCCAGGCCAGCACCACGCTG +
Preference number: 6 (lower is better)
Translates to: PFTQIWKPCSST*SGGGSQASTTL
Trigger: CAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGGCTTCCATATCTGTGTGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp ACCCAAAATTCCTGGCTGCATGGCTGTATTCCCCTCTaGAACAGACGCCCACTCCACGCGGCCAGCCCACGT +
Preference number: 6 (lower is better)
Translates to: TQNSWLHGCIPL*NRRPLHAASPR
Trigger: ACGTGGGCTGGCCGCGTGGAGTGGGCGTCTGTTGCAGAGGGGAATACAGCCATGCAGCCAGGAATTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS GCA 72 bp CTTGGTGGGGCTCCCCTCTGGTGGTCAATTAGCGGCTaGACGCTGGACACAGTGCTTACCTGCATGACCACC +
Preference number: 6 (lower is better)
Translates to: LGGAPLWWSISG*TLDTVLTCMTT
Trigger: GGTGGTCATGCAGGTAAGCACTGTGTCCAGCGTGCAGCCGCTAATTGACCACCAGAGGGGAGCCCCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp CCCCCACGGGCCTGGAGCTCCCGTCTCCTTTGGGCTTaGAACTCTCCTCAGACCTCAGTTCTTGAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PPRAWSSRLLWA*NSPQTSVLEAA
Trigger: TGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTCCAGGCCCGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp CAGGGCCCAAGAGTTCTTGGAACCTGCCCCTCAGGATaGGTGCCCCCAACTTCTCACATGTCACCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: QGPRVLGTCPSG*VPPTSHMSPPS
Trigger: GGAGGGAGGTGACATGTGAGAAGTTGGGGGCACCCATCCTGAGGGGCAGGTTCCAAGAACTCTTGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 90 bp GCCTCTCCGGTCTCTGTTGCCTTGGCCCCATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGGAAGGAGCAAGTCCTGGAACCCAGC +
Preference number: 6 (lower is better)
Translates to: ASPVSVALAPFSLML*PATCFWKEQVLEPS
Trigger: GCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGGCAACAGAGACCGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582679.1
CDS TCA 72 bp ACCCCCACCTACACTCAGGAAACTGAGTTCAGGGCCTaGGCTGTGGGACAAATCGGCCAGCTCTGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: TPTYTQETEFRA*AVGQIGQLWRE
Trigger: CTCCCTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp TGGCATGGGCCAAGTTGCTATTGCCGGGCACCCAGGTaGTCTCAGCAGATGTGGCTGTCAACCGATGGACCC +
Preference number: 6 (lower is better)
Translates to: WHGPSCYCRAPR*SQQMWLSTDGP
Trigger: GGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp TCAGAAACACACAGCACAGGTGGTGAATGGGGAGGGTaGTGCCGAGGGAGCACTAAGCTGGGAGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SETHSTGGEWGG*CRGSTKLGVPG
Trigger: CCCTGGGACTCCCAGCTTAGTGCTCCCTCGGCATCACCCTCCCCATTCACCACCTGTGCTGTGTGTTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp CTGTGGTCCTTTATCTCCGGCTCTGCTCTCTGCTGCTaGTCTTTCGCTTGCTGGGTGGCTGGGCTGGTCCTA +
Preference number: 6 (lower is better)
Translates to: LWSFISGSALCC*SFACWVAGLVL
Trigger: TAGGACCAGCCCAGCCACCCAGCAAGCGAAAGAGCAGCAGCAGAGAGCAGAGCCGGAGATAAAGGACCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CGGAAAGCCTGGAGTTCCTGTGCCAGGAGGCTGAACTaGTCGGTTTGGCTGCGGCACTGTTCTTCGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RKAWSSCARRLN*SVWLRHCSSSS
Trigger: AGAGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CTCGTGGGACCCTTTTGCCATCTCTCTGGAAGGGCTTaGAGGGGGTGCTCCTGGAGGCTCTTGAGTTCCAAG +
Preference number: 6 (lower is better)
Translates to: LVGPFCHLSGRA*RGCSWRLLSSK
Trigger: CTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp TCTTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTaGATGTCTGACAGGTCTGAGTTGCGGCCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSS*MSDRSELRPWS
Trigger: GGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CCA 72 bp CTAATCCAGGCATGTCTTCCAGGCAGTCTCCAGCCCTaGAGGACTCAGGAGACAAGGGACACTGGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: LIQACLPGSLQP*RTQETRDTGQV
Trigger: GACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCCTGGAAGACATGCCTGGATTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CCA 72 bp GGCGGGGCTTGGGAGGAGGCCCAGTTGTGTGGGCTGTaGAGTACACAAACGGACCATTCCCTGATCCAGAAA +
Preference number: 6 (lower is better)
Translates to: GGAWEEAQLCGL*STQTDHSLIQK
Trigger: TTTCTGGATCAGGGAATGGTCCGTTTGTGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577871.1
ENST00000578511.5
CDS CCA 72 bp GTGTGGAGCCAGTACCCACTCCATGGGGAGGAAGATTaGGACTCTCCCTTAAGGGCCCCTAAGAGGACTGCC +
Preference number: 6 (lower is better)
Translates to: VWSQYPLHGEED*DSPLRAPKRTA
Trigger: GGCAGTCCTCTTAGGGGCCCTTAAGGGAGAGTCCCAATCTTCCTCCCCATGGAGTGGGTACTGGCTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp TCACTGGCTGTGTCCACCTCAGGTGTAGGGCATGACTaGGGGCTGTTGTGGATGGACTCGGAGTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SLAVSTSGVGHD*GLLWMDSEWEE
Trigger: CTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 72 bp TCGGGCTGGGACTTGGCCCCATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGGAAGGAGCAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SGWDLAPFSLML*PATCFWKEQVL
Trigger: CAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTCCCAGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CAA 72 bp CCACCCCCAGGGTGGGAGTGTCCTGAAACAGGGACTTaGATTGGCCACAGGTGTGAGGCAGAGGGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PPPGWECPETGT*IGHRCEAEGSF
Trigger: AAAGGACCCCTCTGCCTCACACCTGTGGCCAATCAAAGTCCCTGTTTCAGGACACTCCCACCCTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 90 bp GCTCCCGTCTCCTTTGGGCTTGGAACTCTCCTCAGACCTCAGTTCTaGAAGCTGCAGAGCTGCCGGAGGAGTATCAGCGATGCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: APVSFGLGTLLRPQF*KLQSCRRSISDAWG
Trigger: GCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TCACTGGCTGTGTCCACCTCAGGTGTAGGGCATGACTTGGGGCTGTaGTGGATGGACTCGGAGTGGGAGGAGTTGGAGAGAGACTCTGCC +
Preference number: 6 (lower is better)
Translates to: SLAVSTSGVGHDLGL*WMDSEWEELERDSA
Trigger: GGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TCCTGCTCATCCTCCGAATCATATTCAATGCTGATTTCCAAGCACTaGGGGGAAAGGCAGCTGGCCAGGCCAGGCTCCAGCGCCCGGCCA +
Preference number: 6 (lower is better)
Translates to: SCSSSESYSMLISKH*GERQLARPGSSARP
Trigger: TGGCCGGGCGCTGGAGCCTGGCCTGGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAGCATTGAATATGATTCGGAGGATGAGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS CAA 90 bp GGGAGGGAGGTCAGGAGGTCATCATCCGACACACGCTCTACAAAATaGGAAGGGACCAGGCCCCTTCGGCCATCCATGAGCTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: GREVRRSSSDTRSTK*EGTRPLRPSMSSPS
Trigger: TGAAGGAGAGCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGTGTCGGATGATGACCTCCTGACCTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp AGCTCTTGCTTCACCGACGCTCCATCCAAGGTTGGCTaGGCTCTTCCCCACCCACAAAGGAGGCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SSCFTDAPSKVG*ALPHPQRRLQK
Trigger: CTTCTGCAGCCTCCTTTGTGGGTGGGGAAGAGCTCAGCCAACCTTGGATGGAGCGTCGGTGAAGCAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp CCTGCTCCAGGCTCTCGCATTTCTTCCGCTTCTTGCTaGGCTCCGATTCCAGCTGCTGCACCCTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: PAPGSRISSASC*APIPAAAPSAL
Trigger: AAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATGCGAGAGCCTGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp TACCTCACTGGCTGTGTCCACCTCAGGTGTAGGGCATaGCTTGGGGCTGTTGTGGATGGACTCGGAGTGGGA +
Preference number: 6 (lower is better)
Translates to: YLTGCVHLRCRA*LGAVVDGLGVG
Trigger: TCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CGTGTGTGTGTCTCCAGGTCTGTCCGTGCAGGTCAATaGTGTCTCATGTGTTGGGAAGATGGGTGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: RVCVSRSVRAGQ*CLMCWEDGCPH
Trigger: GTGGGGGCACCCATCTTCCCAACACATGAGACAGCATTGACCTGCACGGACAGACCTGGAGACACACACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp TGTCTCAGCTGCAGTTCCAGCTCCTCACATCGCCTCTaGTTTTTCCGGGCTTCCTGCTCCAGGCTCTCGCAT +
Preference number: 6 (lower is better)
Translates to: CLSCSSSSSHRL*FFRASCSRLSH
Trigger: ATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGAGCTGGAACTGCAGCTGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CGGGAGTTCTCCTCCACCAGGCGGGCATTCTCATTCTaGGCTTGTCTCAGCTGCAGTTCCAGCTCCTCACAT +
Preference number: 6 (lower is better)
Translates to: REFSSTRRAFSF*ACLSCSSSSSH
Trigger: ATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCGCCTGGTGGAGGAGAACTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp GCAAGGGGAGCAGGGAGGGGGAGGGATGACTCTTCATaGAAATCTGGCTCATGGCAAGCTCTCCTTCGCCAT +
Preference number: 6 (lower is better)
Translates to: ARGAGRGRDDSS*KSGSWQALLRH
Trigger: ATGGCGAAGGAGAGCTTGCCATGAGCCAGATTTGCATGAAGAGTCATCCCTCCCCCTCCCTGCTCCCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp TCATGGTACCCAAATGCCAGGGGCTGGGCATCTCCGTaGCAAGCCAGAGAGCCTAGACCTCTGAGCATAGCA +
Preference number: 6 (lower is better)
Translates to: SWYPNARGWASP*QAREPRPLSIA
Trigger: TGCTATGCTCAGAGGTCTAGGCTCTCTGGCTTGGCACGGAGATGCCCAGCCCCTGGCATTTGGGTACCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585149.1
CDS CCA 72 bp GACACCGTTGGATGTGCCAGCAGCATCGATGGTGACTaGGAGCCAACTGATGATCAAGATCCCAGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: DTVGCASSIDGD*EPTDDQDPRGG
Trigger: CCCTCCCCTGGGATCTTGATCATCAGTTGGCTCCCAGTCACCATCGATGCTGCTGGCACATCCAACGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000585149.1
CDS CCA 72 bp CCACCCAACCTCCAGGACCCAAAATTCCTGGCTGCATaGCTGTATTCCCCTCTGCAACAGACGCCCACTCCA +
Preference number: 6 (lower is better)
Translates to: PPNLQDPKFLAA*LYSPLQQTPTP
Trigger: TGGAGTGGGCGTCTGTTGCAGAGGGGAATACAGCCATGCAGCCAGGAATTTTGGGTCCTGGAGGTTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS CCA 72 bp AAAGGCACCTGGGAGGTATGGAGACCACCCCCAGGGTaGGAGTGTCCTGAAACAGGGACTTTGATTGGCCAC +
Preference number: 6 (lower is better)
Translates to: KGTWEVWRPPPG*ECPETGTLIGH
Trigger: GTGGCCAATCAAAGTCCCTGTTTCAGGACACTCCCACCCTGGGGGTGGTCTCCATACCTCCCAGGTGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp GTGTCCACCTCAGGTGTAGGGCATGACTTGGGGCTGTaGTGGATGGACTCGGAGTGGGAGGAGTTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: VSTSGVGHDLGL*WMDSEWEELER
Trigger: TCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp GTATCTGAGTGTGTCAGTGTCGTGCAGCTGTGTGCATCGGTGTCGTaGTGTGTCTGTCAGTGTCTGTGGGTCTGGCCGTCTGTCGCAACC +
Preference number: 6 (lower is better)
Translates to: VSECVSVVQLCASVS*CVCQCLWVWPSVAT
Trigger: GGTTGCGACAGACGGCCAGACCCACAGACACTGACAGACACACAACGACACCGATGCACACAGCTGCACGACACTGACACACTCAGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TCCTCCTCTTCCTCTTCCTCCTCCTCCGGGATGCTAAAGAGCTTCTaGCTACAGAACTGCTGGAGGGGCAGCTCCAGGATCTGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSGMLKSF*LQNCWRGSSRICSK
Trigger: CTTGGAGCAGATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCATCCCGGAGGAGGAGGAAGAGGAAGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS TCA 72 bp ATACCTTCTGCCCATCAGCGTAGATGGCATAGCCTGTaGCCCGGACACCGTTGGATGTGCCAGCAGCATCGA +
Preference number: 6 (lower is better)
Translates to: IPSAHQRRWHSL*PGHRWMCQQHR
Trigger: TCGATGCTGCTGGCACATCCAACGGTGTCCGGGTCACAGGCTATGCCATCTACGCTGATGGGCAGAAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585149.1
CDS GCA 72 bp GGTGAGGGTGCGTGTGTGTGTCTCCAGGTCTGTCCGTaGAGGTCAATGCTGTCTCATGTGTTGGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: GEGACVCLQVCP*RSMLSHVLGRW
Trigger: CCATCTTCCCAACACATGAGACAGCATTGACCTGCACGGACAGACCTGGAGACACACACACGCACCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp ACTCTCCTCAGACCTCAGTTCTTGAAGCTGCAGAGCTaGCGGAGGAGTATCAGCGATGCTTGGGGCTGCACT +
Preference number: 6 (lower is better)
Translates to: TLLRPQFLKLQS*RRSISDAWGCT
Trigger: AGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp TTCTTGCTGAGCTCCGATTCCAGCTGCTGCACCCTCTaGTCTTTCTCTGGCTCCCCTAGAATCACGGGTAGG +
Preference number: 6 (lower is better)
Translates to: FLLSSDSSCCTL*SFSGSPRITGR
Trigger: CCTACCCGTGATTCTAGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCTCAGCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS GCA 72 bp CTTCCTCTTCCTCCTGGATGTCTGACAGGTCTGAGTTaGGGCCGTGGTCCACGAGGGAGTTCACCAGATGAA +
Preference number: 6 (lower is better)
Translates to: LPLPPGCLTGLS*GRGPRGSSPDE
Trigger: TTCATCTGGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS GCA 72 bp ATCGTCCATGCCCCCAAACACAGTAATGACATCCCCTaGCCGGAAGGGCAGCTCTGCCTCCACGTCCATATT +
Preference number: 6 (lower is better)
Translates to: IVHAPKHSNDIP*PEGQLCLHVHI
Trigger: AATATGGACGTGGAGGCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACTGTGTTTGGGGGCATGGACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000577871.1
ENST00000578511.5
ENST00000580669.6
ENST00000581675.5
CDS CCA 72 bp CCATTCTCCCTGATGCTGTTGCCAGCAACCTGCTTCTaGAAGGAGCAAGTCCTGGAACCCAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PFSLMLLPATCF*KEQVLEPSSSS
Trigger: GGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
ENST00000582679.1
CDS CAA 72 bp TGTGTCAGTGTCGTGCAGCTGTGTGCATCGGTGTCGTaGTGTGTCTGTCAGTGTCTGTGGGTCTGGCCGTCT +
Preference number: 6 (lower is better)
Translates to: CVSVVQLCASVS*CVCQCLWVWPS
Trigger: AGACGGCCAGACCCACAGACACTGACAGACACACAACGACACCGATGCACACAGCTGCACGACACTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 72 bp GTCAGGAGGTCATCATCCGACACACGCTCTACAAAATaGGAAGGGACCAGGCCCCTTCGGCCATCCATGAGC +
Preference number: 6 (lower is better)
Translates to: VRRSSSDTRSTK*EGTRPLRPSMS
Trigger: GCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGTGTCGGATGATGACCTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 72 bp GTCTCTGTTGCCTTGGCCCCATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGGAAGGAGCAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: VSVALAPFSLML*PATCFWKEQVL
Trigger: CAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGGCAACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582679.1
CDS CAA 90 bp ATGTTCCCACCTTCACCTCTGGTACCTGCACAGCTCTGTCAGCTCTaGCCAGCCTGCATGTCTTCCCTTCCTCAAACTCCCACTTGCTGC +
Preference number: 6 (lower is better)
Translates to: MFPPSPLVPAQLCQL*PACMSSLPQTPTCC
Trigger: GCAGCAAGTGGGAGTTTGAGGAAGGGAAGACATGCAGGCTGGCAAGAGCTGACAGAGCTGTGCAGGTACCAGAGGTGAAGGTGGGAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp TCCTCCGGGATGCTAAAGAGCTTCTTGCTACAGAACTaGTGGAGGGGCAGCTCCAGGATCTGCTCCAAGATC +
Preference number: 6 (lower is better)
Translates to: SSGMLKSFLLQN*WRGSSRICSKI
Trigger: GATCTTGGAGCAGATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCATCCCGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268893.10
ENST00000343736.9
ENST00000580669.6
CDS GCA 72 bp CCTCCCTCCAAAAACATGGAGCGCAAGGACAAGGACTaGTTAGAAGCAGCTGTCACTGCCCAGGAAGGTAGC +
Preference number: 6 (lower is better)
Translates to: PPSKNMERKDKD*LEAAVTAQEGS
Trigger: GCTACCTTCCTGGGCAGTGACAGCTGCTTCTAAGCAGTCCTTGTCCTTGCGCTCCATGTTTTTGGAGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp AGGTCTGTCCGTGCAGGTCAATGCTGTCTCATGTGTTaGGAAGATGGGTGCCCCCACTTCTGTGTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RSVRAGQCCLMC*EDGCPHFCVLR
Trigger: CCTCAACACACAGAAGTGGGGGCACCCATCTTCCCAACACATGAGACAGCATTGACCTGCACGGACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp AGGGTTCAAGGCAGGCTCCAAGGCTCTGCTAGAGTCTaGGTAAGTGGGAGCACCCCAGACACAACAATTGCT +
Preference number: 6 (lower is better)
Translates to: RVQGRLQGSARV*VSGSTPDTTIA
Trigger: AGCAATTGTTGTGTCTGGGGTGCTCCCACTTACCCAGACTCTAGCAGAGCCTTGGAGCCTGCCTTGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS CAA 72 bp CAGGTCTGTCCGTGCAGGTCAATGCTGTCTCATGTGTaGGGAAGATGGGTGCCCCCACTTCTGTGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: QVCPCRSMLSHV*GRWVPPLLCVE
Trigger: CTCAACACACAGAAGTGGGGGCACCCATCTTCCCAACACATGAGACAGCATTGACCTGCACGGACAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 90 bp TGGGACTCTGGAGTTTCCTCTCAGGGCCGTGCTAGGTTACTGAGCTaGTTTCGTAAGGGCATTCATCTCCCATCCCTGACAAGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: WDSGVSSQGRARLLS*FRKGIHLPSLTRAP
Trigger: TGGGGCTCTTGTCAGGGATGGGAGATGAATGCCCTTACGAAACAAGCTCAGTAACCTAGCACGGCCCTGAGAGGAAACTCCAGAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS TCA 72 bp GCTGTGGCAGTATGTGATGCTGTCCCTGGTTGTATCTaGGTGTGTCAGTGTCGTGCAGCTGTGTGCATCGGT +
Preference number: 6 (lower is better)
Translates to: AVAVCDAVPGCI*VCQCRAAVCIG
Trigger: ACCGATGCACACAGCTGCACGACACTGACACACTCAGATACAACCAGGGACAGCATCACATACTGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp AGGGAAGACCCAGCTGGTGTTTGGAATTCTGAGCCCTaGTGGCGAATCAGTCACCTTCAGGATCTGACCCTC +
Preference number: 6 (lower is better)
Translates to: REDPAGVWNSEP*WRISHLQDLTL
Trigger: GAGGGTCAGATCCTGAAGGTGACTGATTCGCCATCAGGGCTCAGAATTCCAAACACCAGCTGGGTCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578486.1
CDS TCA 72 bp AGGGAGGAGGGAAGACCCAGCTGGTGTTTGGAATTCTaGGCCCTGATGGCGAATCAGTCACCTTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: REEGRPSWCLEF*ALMANQSPSGS
Trigger: AGATCCTGAAGGTGACTGATTCGCCATCAGGGCTCAGAATTCCAAACACCAGCTGGGTCTTCCCTCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578486.1
CDS GCA 72 bp TGCTGTCCCTGGTTGTATCTGAGTGTGTCAGTGTCGTaGAGCTGTGTGCATCGGTGTCGTTGTGTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: CCPWLYLSVSVS*SCVHRCRCVSV
Trigger: GACAGACACACAACGACACCGATGCACACAGCTGCACGACACTGACACACTCAGATACAACCAGGGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp AATCTGGCTCATGGCAAGCTCTCCTTCGCCATTCCCTaGACTACAGTGGGAAAGCTGGGTCAGCTCCAGTAT +
Preference number: 6 (lower is better)
Translates to: NLAHGKLSFAIP*TTVGKLGQLQY
Trigger: ATACTGGAGCTGACCCAGCTTTCCCACTGTAGTCCAGGGAATGGCGAAGGAGAGCTTGCCATGAGCCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CCA 72 bp AGGGGGAGGGATGACTCTTCATGCAAATCTGGCTCATaGCAAGCTCTCCTTCGCCATTCCCTGGACTACAGT +
Preference number: 6 (lower is better)
Translates to: RGRDDSSCKSGS*QALLRHSLDYS
Trigger: ACTGTAGTCCAGGGAATGGCGAAGGAGAGCTTGCCATGAGCCAGATTTGCATGAAGAGTCATCCCTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS TCA 72 bp GTGTGGGTGTCTGTATTGCAGGGCTGTGGCAGTATGTaGTGCTGTCCCTGGTTGTATCTGAGTGTGTCAGTG +
Preference number: 6 (lower is better)
Translates to: VWVSVLQGCGSM*CCPWLYLSVSV
Trigger: CACTGACACACTCAGATACAACCAGGGACAGCATCACATACTGCCACAGCCCTGCAATACAGACACCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp ACTCTGGAGTTTCCTCTCAGGGCCGTGCTAGGTTACTaGGCTTGTTTCGTAAGGGCATTCATCTCCCATCCC +
Preference number: 6 (lower is better)
Translates to: TLEFPLRAVLGY*ACFVRAFISHP
Trigger: GGGATGGGAGATGAATGCCCTTACGAAACAAGCTCAGTAACCTAGCACGGCCCTGAGAGGAAACTCCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS TCA 72 bp GGTCAGCTCCAGTATTTGAGACAAAGGAGCACTGTCTaGTTATGGTCAAGTGGGGGTGGACGGTCACACAGG +
Preference number: 6 (lower is better)
Translates to: GQLQYLRQRSTV*LWSSGGGRSHR
Trigger: CCTGTGTGACCGTCCACCCCCACTTGACCATAATCAGACAGTGCTCCTTTGTCTCAAATACTGGAGCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp GATGTAGATGTACTCGCCAGCTGTCAGCGGAAGCTCTaGTTCTGGATTCTCATTGGGACCCTCAAAGGGGTT +
Preference number: 6 (lower is better)
Translates to: DVDVLASCQRKL*FWILIGTLKGV
Trigger: AACCCCTTTGAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCGCTGACAGCTGGCGAGTACATCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp GTGTGTGTGTGTGTGGGTGTCTGTATTGCAGGGCTGTaGCAGTATGTGATGCTGTCCCTGGTTGTATCTGAG +
Preference number: 6 (lower is better)
Translates to: VCVCVGVCIAGL*QYVMLSLVVSE
Trigger: CTCAGATACAACCAGGGACAGCATCACATACTGCCACAGCCCTGCAATACAGACACCCACACACACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CCA 72 bp GATGGAACCAGGCCCCTTTGTCCATTTAATTCCCCCTaGAGAGAAGAGGCCGGTGAGACTGAGATCAGGAAA +
Preference number: 6 (lower is better)
Translates to: DGTRPLCPFNSP*REEAGETEIRK
Trigger: TTTCCTGATCTCAGTCTCACCGGCCTCTTCTCTCCAGGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS CAA 72 bp GGTGGTGCTGTGTGTCACTGTCTGCCCATTTCAGAGTaGCCAGTTGTTTGTGTGTGTGTGTGTGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: GGAVCHCLPISE*PVVCVCVCGCL
Trigger: CAGACACCCACACACACACACACAAACAACTGGCAACTCTGAAATGGGCAGACAGTGACACACAGCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS CAA 72 bp GGAGTTTCCTCTCAGGGCCGTGCTAGGTTACTGAGCTaGTTTCGTAAGGGCATTCATCTCCCATCCCTGACA +
Preference number: 6 (lower is better)
Translates to: GVSSQGRARLLS*FRKGIHLPSLT
Trigger: TGTCAGGGATGGGAGATGAATGCCCTTACGAAACAAGCTCAGTAACCTAGCACGGCCCTGAGAGGAAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578511.5
CDS CAA 90 bp CTGTGCTCATCAGTGTCTGAAATCAGCTCACTCCTGGATGCTAATTaGCTGACTGCTCAGGGACCTGGTCTTTGTTCCCCACAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: LCSSVSEISSLLDAN*LTAQGPGLCSPQSP
Trigger: GGGAGACTGTGGGGAACAAAGACCAGGTCCCTGAGCAGTCAGCAAATTAGCATCCAGGAGTGAGCTGATTTCAGACACTGATGAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583624.1
CDS GCA 72 bp GTGGTGCTGTGTGTCACTGTCTGCCCATTTCAGAGTTaGCAGTTGTTTGTGTGTGTGTGTGTGGGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: VVLCVTVCPFQS*QLFVCVCVGVC
Trigger: ACAGACACCCACACACACACACACAAACAACTGGCAACTCTGAAATGGGCAGACAGTGACACACAGCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268893.10
ENST00000343736.9
CDS TCA 72 bp TGTCTGAAATCAGCTCACTCCTGGATGCTAATTTGCTaGCTGCTCAGGGACCTGGTCTTTGTTCCCCACAGT +
Preference number: 6 (lower is better)
Translates to: CLKSAHSWMLIC*LLRDLVFVPHS
Trigger: ACTGTGGGGAACAAAGACCAGGTCCCTGAGCAGTCAGCAAATTAGCATCCAGGAGTGAGCTGATTTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583624.1
CDS CAA 72 bp TCAGTGTCTGAAATCAGCTCACTCCTGGATGCTAATTaGCTGACTGCTCAGGGACCTGGTCTTTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: SVSEISSLLDAN*LTAQGPGLCSP
Trigger: TGGGGAACAAAGACCAGGTCCCTGAGCAGTCAGCAAATTAGCATCCAGGAGTGAGCTGATTTCAGACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583624.1
CDS TCA 72 bp GGACTACAGTGGGAAAGCTGGGTCAGCTCCAGTATTTaGGACAAAGGAGCACTGTCTGATTATGGTCAAGTG +
Preference number: 6 (lower is better)
Translates to: GLQWESWVSSSI*DKGALSDYGQV
Trigger: CACTTGACCATAATCAGACAGTGCTCCTTTGTCTCAAATACTGGAGCTGACCCAGCTTTCCCACTGTAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp CACTTTGTCACATCACCCTGTTCTTCTCCACCACTGTaGTCATCAGTGTCTGAAATCAGCTCACTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: HFVTSPCSSPPL*SSVSEISSLLD
Trigger: ATCCAGGAGTGAGCTGATTTCAGACACTGATGAGCACAGTGGTGGAGAAGAACAGGGTGATGTGACAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583624.1
CDS CCA 72 bp TGCAGAGGACAAGGGTGGGAAGCCTATTATTACTGGTaGCATTACAGTGTCACCCTGGCACCAGTAATAATT +
Preference number: 6 (lower is better)
Translates to: CRGQGWEAYYYW*HYSVTLAPVII
Trigger: AATTATTACTGGTGCCAGGGTGACACTGTAATGCCACCAGTAATAATAGGCTTCCCACCCTTGTCCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2
CDS GCA 72 bp GTAAATCATGCATCTGATCACCCTAACAGGTCACAATaGAGAGGACAAGGGTGGGAAGCCTATTATTACTGG +
Preference number: 6 (lower is better)
Translates to: VNHASDHPNRSQ*RGQGWEAYYYW
Trigger: CCAGTAATAATAGGCTTCCCACCCTTGTCCTCTGCATTGTGACCTGTTAGGGTGATCAGATGCATGATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581692.2