Pregenerated sensors for TSPO2 (Homo sapiens)
Ensembl gene IDs: ENSG00000112212Ensembl transcript IDs: ENST00000373158.6, ENST00000373161.6, ENST00000470917.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACGGGCAGCCAGTTTGTTaGTGGGATGCCAGATCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QEGGPIGVNPNSTALLADGQPVC*WDARSV Trigger: CACTGATCTGGCATCCCATCAACAAACTGGCTGCCC...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373158.6 |
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| 3UTR-3UTR GCA 90 bp | CTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTGGGCTCCACAGCCCTGCTTaGAGACTCTTCCTCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: LISKEKRHQGTQEGGPIGLHSPA*RLFLPT Trigger: GGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAG...CCCAATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| 3UTR TCA 72 bp | GGCACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTaGACCCTAACTCCACAGCCCTGCTTGCAGACTCTT | + |
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Preference number: 3 (lower is better) Translates to: GTRGPRRVVPLG*TLTPQPCLQTL Trigger: AAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACAACAGGGCAGCCAGTTaGTTGATGGGATGCCAGATC | + |
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Preference number: 3 (lower is better) Translates to: QEGGPIGVNPNSTALLADNRAAS*LMGCQI Trigger: GATCTGGCATCCCATCAACAAACTGGCTGCCCTGTT...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373158.6 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCAGGGCAGCCAGTTTGTaGATGGGATGCCAGATCAGT | + |
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Preference number: 3 (lower is better) Translates to: IGVNPNSTALLADSSSPPRAASL*MGCQIS Trigger: ACTGATCTGGCATCCCATCAACAAACTGGCTGCCCT...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373158.6 |
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| CDS-3UTR CCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGGGGGACCCAGGAGGGTaGTCCCATTGGGGTGAACCC | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALGDPGG*SHWGEP Trigger: GGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCC...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCGGGCTGAAGTCACGGTaGGCCAGGCTAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTAGLKSR*ARLGRA Trigger: TGCCCTACCTAGCCTGGCTCACCGTGACTTCAGCCC...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCGTGGTAGGTGAGGGCTaGAGTCACGGTGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTAVVGEG*SHGEPG Trigger: GCCTGGCTCACCGTGACTTCAGCCCTCACCTACCAC...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGGGCTGAAGTCACGGTaGGCCAGGCTAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLGLKSR*ARLGRA Trigger: TGCCCTACCTAGCCTGGCTCACCGTGACTTCAGCCC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGTGGTAGGTGAGGGCTaGAGTCACGGTGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLVVGEG*SHGEPG Trigger: GCCTGGCTCACCGTGACTTCAGCCCTCACCTACCAC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGGTCCCTCCTCTCCCATaGCCTAGGGCCTCAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALVPPLP*PRASVT Trigger: AGTGACTGAGGCCCTAGGGCATGGGAGAGGAGGGAC...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGTGGTCCCATTGGGGTaGACCCTAACTCCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLVVPLG*TLTPQP Trigger: GGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCAC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGGGATGCCAGATCAGTaGTGTGCTCACCACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLGMPDQ*CAHHQP Trigger: GGGCTGGTGGTGAGCACAGCACTGATCTGGCATCCC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTCTCCACAGCCCTGCTTaGAGACTCTTCCTCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLLHSPA*RLFLPT Trigger: GGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAG...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGTCCACAGCACTCCTCTaGCACTTGGAGGACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALSTALL*HLEDTA Trigger: GGCAGTGTCCTCCAAGTGCCAGAGGAGTGCTGTGGA...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCAGTCACTCTTCTCCGTaGGCTGAGGCTGGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTASHSSP*AEAGAL Trigger: CAGTGCACCAGCCTCAGCCCACGGAGAAGAGTGACT...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGTCCTCCAAGTGCTTCTaGGTCCTGGAGATCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALSSKCF*VLEIRS Trigger: GGACCTGATCTCCAGGACTCAGAAGCACTTGGAGGA...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGGGGCAGCCAGTTTGTTaGTGGGATGCCAGATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALGQPVC*WDARSV Trigger: CACTGATCTGGCATCCCATCAACAAACTGGCTGCCC...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCGGGCAGCCAGTTTGTTaGTGGGATGCCAGATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTAGQPVC*WDARSV Trigger: CACTGATCTGGCATCCCATCAACAAACTGGCTGCCC...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACCTCTTCTCCGTGGGCTaGGGCTGGTGCACTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QEGGPIGVNPNSTALLADLFSVG*GWCTGQ Trigger: TTGTCCAGTGCACCAGCCTCAGCCCACGGAGAAGAG...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGTGGTCCCATTGGGGTaGACCCTAACTCCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLAVVPLG*TLTPQP Trigger: GGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCAC...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGGGTGATGAGCTTTTCTaGAGTGGGCAGCGCTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALGDELF*SGQRLA Trigger: GGCTAAGCGCTGCCCACTGCAGAAAAGCTCATCACC...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCACTCCACAGCCCTGCTTaGAGACTCTTCCTCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLALHSPA*RLFLPT Trigger: GGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAG...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGACATGTGATCACGAGTaGACAGCCAGACCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALTCDHE*TARPGW Trigger: CCATCCTGGTCTGGCTGTTCACTCGTGATCACATGT...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCACCAACCAGACATGTaGTCACGAGTGAACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTAHQPDM*SRVNSQ Trigger: CTGGCTGTTCACTCGTGATCACATGTCTGGTTGGTG...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCCTCTTCTCCGTGGGCTaGGGCTGGTGCACTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPLFSVG*GWCTGQ Trigger: TTGTCCAGTGCACCAGCCTCAGCCCACGGAGAAGAG...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACCACTCCTCTGGCACTTaGAGGACACTGCCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: QEGGPIGVNPNSTALLADHSSGT*RTLPST Trigger: AGTGCTGGGCAGTGTCCTCCAAGTGCCAGAGGAGTG...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACCTGAGGCTGGTGCACTaGACAAAGGCTGTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QEGGPIGVNPNSTALLADLRLVH*TKAVPP Trigger: TGGAGGGACAGCCTTTGTCCAGTGCACCAGCCTCAG...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGAAGCCGCATTCACCTTaGAGAGGCAAAATCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALKPHSP*RGKILP Trigger: GGGCAAGATTTTGCCTCTTCAAGGTGAATGCGGCTT...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTACATGTGATCACGAGTaGACAGCCAGACCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLTCDHE*TARPGW Trigger: CCATCCTGGTCTGGCTGTTCACTCGTGATCACATGT...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGGTGATGAGCTTTTCTaGAGTGGGCAGCGCTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLAGDELF*SGQRLA Trigger: GGCTAAGCGCTGCCCACTGCAGAAAAGCTCATCACC...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACGCACTTGGAGGACACTaGCCAGCACTGGTAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: QEGGPIGVNPNSTALLADALGGH*PALVTA Trigger: AGCAGTTACCAGTGCTGGGCAGTGTCCTCCAAGTGC...GTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | CTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGGGATGCCAGATCAGTaGTGTGCTCACCACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LISKEKRHQGTQEGGPIGGMPDQ*CAHHQP Trigger: GGGCTGGTGGTGAGCACAGCACTGATCTGGCATCCC...CCCAATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | CTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTCCCTCCTCTCCCATaGCCTAGGGCCTCAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: LISKEKRHQGTQEGGPIGVPPLP*PRASVT Trigger: AGTGACTGAGGCCCTAGGGCATGGGAGAGGAGGGAC...CCCAATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCACTAACTCCACAGCCCTaGTTGCAGACTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLALTPQP*LQTLPP Trigger: GGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAG...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCCTGAGGCTGGTGCACTaGACAAAGGCTGTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPLRLVH*TKAVPP Trigger: TGGAGGGACAGCCTTTGTCCAGTGCACCAGCCTCAG...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCAGTCACTCTTCTCCGTaGGCTGAGGCTGGTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPSHSSP*AEAGAL Trigger: CAGTGCACCAGCCTCAGCCCACGGAGAAGAGTGACT...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTAAGCCGCATTCACCTTaGAGAGGCAAAATCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLKPHSP*RGKILP Trigger: GGGCAAGATTTTGCCTCTTCAAGGTGAATGCGGCTT...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCACAAAGATAGCCCCTTaGAGCCGCATTCACCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: HQGTQEGGPIGVNPNSTATKIAP*SRIHLE Trigger: TTCAAGGTGAATGCGGCTTCAAGGGGCTATCTTTGT...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTCAGGGTTGTGGACTGTaGAAAAGAGAACCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLQGCGL*KREPGQ Trigger: CTGTCCTGGTTCTCTTTTTCACAGTCCACAACCCTG...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCGCACTTGGAGGACACTaGCCAGCACTGGTAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPALGGH*PALVTA Trigger: AGCAGTTACCAGTGCTGGGCAGTGTCCTCCAAGTGC...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCGCCAGATCAGTGCTGTaGTCACCACCAGCCCATACA | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPARSVL*SPPAHT Trigger: TGTATGGGCTGGTGGTGAGCACAGCACTGATCTGGC...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR GCA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCCTAACTCCACAGCCCTaGTTGCAGACTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: IGVNPNSTALLADSSSPPLTPQP*LQTLPP Trigger: GGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAG...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | CAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGATCTCCTGGCTTCCATaGACTTCTTTTCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: QGTQEGGPIGVNPNSTALISWLP*TSFLHS Trigger: GCTGTGGAGAAAAGAAGTCCATGGAAGCCAGGAGAT...CAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TTTCCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGGGACCCAGGAGGGTaGTCCCATTGGGGTGAACCC | + |
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Preference number: 4 (lower is better) Translates to: FPISLISKEKRHQGTQEGGDPGG*SHWGEP Trigger: GGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCC...ACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGTAACTGCTTCTAAGTaGATAGGCCTTCCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GTQEGGPIGVNPNSTALLVTASK*IGLPPS Trigger: ACTTGGAGGAAGGCCTATTCACTTAGAAGCAGTTAC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAACAAAGATAGCCCCTTaGAGCCGCATTCACCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLATKIAP*SRIHLE Trigger: TTCAAGGTGAATGCGGCTTCAAGGGGCTATCTTTGT...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTCACTCCTCTGGCACTTaGAGGACACTGCCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SLISKEKRHQGTQEGGPIHSSGT*RTLPST Trigger: AGTGCTGGGCAGTGTCCTCCAAGTGCCAGAGGAGTG...AATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTTCCACAGCACTCCTCTaGCACTTGGAGGACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: SLISKEKRHQGTQEGGPISTALL*HLEDTA Trigger: GGCAGTGTCCTCCAAGTGCCAGAGGAGTGCTGTGGA...AATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGTAACTGCTTCTAAGTaGATAGGCCTTCCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLAVTASK*IGLPPS Trigger: ACTTGGAGGAAGGCCTATTCACTTAGAAGCAGTTAC...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGGAAAGTTCACAATCTaGAGGCAGGAGCCAGAAATT | + |
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Preference number: 4 (lower is better) Translates to: TQEGGPIGVNPNSTALLAGKFTI*RQEPEI Trigger: AATTTCTGGCTCCTGCCTTCAGATTGTGAACTTTCC...TGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTCCCATTGCCAGACCAGGGTTGTaGACTGTGAAAAAGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: SLISKEKRHQGTQEGGPIARPGL*TVKKRT Trigger: GGTTCTCTTTTTCACAGTCCACAACCCTGGTCTGGC...AATGGGACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTCACCAACCAGACATGTaGTCACGAGTGAACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FPISLISKEKRHQGTQEGHQPDM*SRVNSQ Trigger: CTGGCTGTTCACTCGTGATCACATGTCTGGTTGGTG...ACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TTTCCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTAGCCAGGTATGTAGCTaGCCCTCACCGAGAACTGTT | + |
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Preference number: 4 (lower is better) Translates to: FPISLISKEKRHQGTQEGSQVCS*PSPRTV Trigger: AACAGTTCTCGGTGAGGGCCAGCTACATACCTGGCT...ACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTCTGTTCTACCTAAGCTaGTCTACCAACCTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: FPISLISKEKRHQGTQEGLFYLS*STNLES Trigger: ACTTTCCAGGTTGGTAGATCAGCTTAGGTAGAACAG...ACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CCA 90 bp | TTTCCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGCTGATCTACCAACCTaGAAAGTTCACAATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FPISLISKEKRHQGTQEGADLPT*KVHNLK Trigger: CTTCAGATTGTGAACTTTCCAGGTTGGTAGATCAGC...ACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CAA 90 bp | CACCAGGGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCAGGGCAGCCAGTTTGTaGATGGGATGCCAGATCAGT | + |
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Preference number: 5 (lower is better) Translates to: HQGTQEGGPIGVNPNSTARAASL*MGCQIS Trigger: ACTGATCTGGCATCCCATCAACAAACTGGCTGCCCT...GGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS GCA 90 bp | GTGCTTCTGAGTCCTGGAGATCAGGTCCCGGGTGATGAGCTTTTCTaGAGTGGGCAGCGCTTAGCCAGGTATGTAGCTGGCCCTCACCGA | + |
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Preference number: 5 (lower is better) Translates to: VLLSPGDQVPGDELF*SGQRLARYVAGPHR Trigger: TCGGTGAGGGCCAGCTACATACCTGGCTAAGCGCTGCCCACTGCAGAAAAGCTCATCACCCGGGACCTGATCTCCAGGACTCAGAAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CAA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTAGGGCCAGACCAGGGTaGTGGACTGTGAAAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GTQEGGPIGVNPNSTALLRARPG*WTVKKR Trigger: TCTCTTTTTCACAGTCCACAACCCTGGTCTGGCCCT...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS-3UTR CAA 90 bp | GGGACCCAGGAGGGTGGTCCCATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGAAGCCGCATTCACCTaGAAGAGGCAAAATCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: GTQEGGPIGVNPNSTALLEAAFT*KRQNLA Trigger: GGCAAGATTTTGCCTCTTCAAGGTGAATGCGGCTTC...AAGCAGGGCTGTGGAGTTAGGGTTCACCCCAATGGGACCACCCTCCTGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CAA 90 bp | ATTGGGGTGAACCCTAACTCCACAGCCCTGCTTGCAGACTCTTCCTCCCCACCCAACAGGGCAGCCAGTTaGTTGATGGGATGCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: IGVNPNSTALLADSSSPPNRAAS*LMGCQI Trigger: GATCTGGCATCCCATCAACAAACTGGCTGCCCTGTT...GGGTGGGGAGGAAGAGTCTGCAAGCAGGGCTGTGGAGTTAGGGTTCACCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS TCA 90 bp | CTGGCACTTGGAGGACACTGCCCAGCACTGGTAACTGCTTCTAAGTaGATAGGCCTTCCTCCAAGTGCTTCTGAGTCCTGGAGATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LALGGHCPALVTASK*IGLPPSASESWRSG Trigger: ACCTGATCTCCAGGACTCAGAAGCACTTGGAGGAAGGCCTATTCACTTAGAAGCAGTTACCAGTGCTGGGCAGTGTCCTCCAAGTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS-3UTR CAA 90 bp | CCCATTTCTCTGATTTCTAAGGAAAAACGGCACCAGGGGACCCAGGAGGGTGGTAGGGCAGCCAGTTTGTaGATGGGATGCCAGATCAGT | + |
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Preference number: 5 (lower is better) Translates to: PISLISKEKRHQGTQEGGRAASL*MGCQIS Trigger: ACTGATCTGGCATCCCATCAACAAACTGGCTGCCCT...ACCACCCTCCTGGGTCCCCTGGTGCCGTTTTTCCTTAGAAATCAGAGAAATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS TCA 90 bp | GCCAGGTATGTAGCTGGCCCTCACCGAGAACTGTTCTACCTAAGCTaGTCTACCAACCTGGAAAGTTCACAATCTGAAGGCAGGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ARYVAGPHRELFYLS*STNLESSQSEGRSQ Trigger: CTGGCTCCTGCCTTCAGATTGTGAACTTTCCAGGTTGGTAGATCAGCTTAGGTAGAACAGTTCTCGGTGAGGGCCAGCTACATACCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS TCA 90 bp | ACTGTTCTACCTAAGCTGATCTACCAACCTGGAAAGTTCACAATCTaGAGGCAGGAGCCAGAAATTCCTGGGGACTCTTTTCTAGTCACG | + |
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Preference number: 5 (lower is better) Translates to: TVLPKLIYQPGKFTI*RQEPEIPGDSFLVT Trigger: CGTGACTAGAAAAGAGTCCCCAGGAATTTCTGGCTCCTGCCTTCAGATTGTGAACTTTCCAGGTTGGTAGATCAGCTTAGGTAGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS GCA 72 bp | AGTCCTGGAGATCAGGTCCCGGGTGATGAGCTTTTCTaGAGTGGGCAGCGCTTAGCCAGGTATGTAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPGDQVPGDELF*SGQRLARYVAG Trigger: GCCAGCTACATACCTGGCTAAGCGCTGCCCACTGCAGAAAAGCTCATCACCCGGGACCTGATCTCCAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373158.6 ENST00000373161.6 |
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| CDS GCA 72 bp | CAGGGCAGCCAGTTTGTTGATGGGATGCCAGATCAGTaGTGTGCTCACCACCAGCCCATACAGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGSQFVDGMPDQ*CAHHQPIQQQQ Trigger: CTGCTGCTGCTGTATGGGCTGGTGGTGAGCACAGCACTGATCTGGCATCCCATCAACAAACTGGCTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373158.6 ENST00000373161.6 ENST00000470917.1 |
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| CDS CCA 72 bp | AGCAGCAGCAGGTGCAGCAGGGCCAGACCAGGGTTGTaGACTGTGAAAAAGAGAACCAGGACAGTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSRCSRARPGL*TVKKRTRTVQL Trigger: CAGCTGGACTGTCCTGGTTCTCTTTTTCACAGTCCACAACCCTGGTCTGGCCCTGCTGCACCTGCTGCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373161.6 ENST00000470917.1 |
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| CDS TCA 72 bp | CTAGGTAGGGCAGCAGTAACAGGGCAGCCAGTTTGTTaGTGGGATGCCAGATCAGTGCTGTGCTCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: LGRAAVTGQPVC*WDARSVLCSPP Trigger: TGGTGGTGAGCACAGCACTGATCTGGCATCCCATCAACAAACTGGCTGCCCTGTTACTGCTGCCCTACCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373158.6 ENST00000373161.6 ENST00000470917.1 |
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| CDS CCA 72 bp | TTTCTGCAGTGGGCAGCGCTTAGCCAGGTATGTAGCTaGCCCTCACCGAGAACTGTTCTACCTAAGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: FLQWAALSQVCS*PSPRTVLPKLI Trigger: GATCAGCTTAGGTAGAACAGTTCTCGGTGAGGGCCAGCTACATACCTGGCTAAGCGCTGCCCACTGCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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| CDS TCA 72 bp | GTAGCTGGCCCTCACCGAGAACTGTTCTACCTAAGCTaGTCTACCAACCTGGAAAGTTCACAATCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VAGPHRELFYLS*STNLESSQSEG Trigger: GCCTTCAGATTGTGAACTTTCCAGGTTGGTAGATCAGCTTAGGTAGAACAGTTCTCGGTGAGGGCCAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373161.6 |
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