Pregenerated sensors for TSPO (Homo sapiens)
Ensembl gene IDs: ENSG00000100300Ensembl transcript IDs: ENST00000329563.8, ENST00000337554.8, ENST00000396265.4, ENST00000428336.5, ENST00000472378.1, ENST00000583777.5
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGGGCCACCTCTGAAGCTCTGCTGACCCCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGTGGTCATGAAAGCGTGACGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: GGATSEALLTPGPRP*QTSRPSGHESVTAT Trigger: GGTGGCCGTCACGCTTTCATGACCACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGGTGGCCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR TCA 90 bp | GGCCAAGGCCCTGACAGACTAGCAGGCCCAGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GQGPDRLAGPVVMKA*RPPHHKRDGTCWCS Trigger: GCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR GCA 90 bp | CATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTaGTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HVPRTCSKHAESTGH*SRVGAQVGPPLKLC Trigger: GCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGACCTGCTGGTGCAGCTaGAGTCCCTGGTGGGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLTCWCS*SPWWAG Trigger: CCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGT...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGCCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLPGPRP*QTSRPS Trigger: ACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGG...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGCAGGCCCAGTGGTCATaGAAGCGTGACGGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLQAQWS*KRDGHH Trigger: GTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTG...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGAAGCGTGATGGCACCTaGTGGTGCAGCTGCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLKRDGT*WCSCSP Trigger: GGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTT...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGACCACATCACAAGCGTaGTGGCACCTGCTGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLTTSQA*WHLLVQ Trigger: CTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGT...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: RTLLPGGGSGGATSEALLVVMKA*RPPHHK Trigger: CTTGTGATGTGGTGGCCGTCACGCTTTCATGACCAC...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCGTGATGGCACCTGCTaGTGCAGCTGCAGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SMFQEHALSMQKAQDTAPRDGTC*CSCSPW Trigger: CCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGPGPRP*QTSRPS Trigger: ACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGG...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTPGPRP*QTSRPS Trigger: ACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACCTCTGAAGCTCTGCTaGCCCCTGGGCCAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGPLKLC*PLGQGP Trigger: AGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGG...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACCTCTGAAGCTCTGCTaGCCCCTGGGCCAAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTPLKLC*PLGQGP Trigger: AGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACAGGCCCAGTGGTCATaGAAGCGTGACGGCCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGQAQWS*KRDGHH Trigger: GTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTG...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR GCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGDGTCW*SCSPWW Trigger: CCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATC...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTDGTCW*SCSPWW Trigger: CCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATC...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAAGCTCTGCTGACCCCTaGGCCAAGGCCCTGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTSSADP*AKALTD Trigger: GTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR GCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAAAGCGTGATGGCACCTaGTGGTGCAGCTGCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGKRDGT*WCSCSP Trigger: GGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTT...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAACCACATCACAAGCGTaGTGGCACCTGCTGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTTTSQA*WHLLVQ Trigger: CTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LIKFHVPRTCSKHAESTGVVMKA*RPPHHK Trigger: CTTGTGATGTGGTGGCCGTCACGCTTTCATGACCAC...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: QLIKFHVPRTCSKHAESTVVMKA*RPPHHK Trigger: CTTGTGATGTGGTGGCCGTCACGCTTTCATGACCAC...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR TCA 72 bp | ACCTCTGAAGCTCTGCTGACCCCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGTGGTCATGAAAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: TSEALLTPGPRP*QTSRPSGHESV Trigger: CACGCTTTCATGACCACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR GCA 72 bp | AGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTaGTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RTCSKHAESTGH*SRVGAQVGPPL Trigger: CAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR TCA 72 bp | CCTGACAGACTAGCAGGCCCAGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAGCGTGATGGCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: PDRLAGPVVMKA*RPPHHKRDGTC Trigger: GCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTGCTAGTCTGTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| 3UTR GCA 72 bp | TTTATTCAGCTTATAAAATTCCATGTTCCAAGAACATaGTCTAAGCATGCAGAAAGCACAGGACACTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: FIQLIKFHVPRT*SKHAESTGHCS Trigger: GGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTGAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGGCCGGGCACTCACTCTaGCAGCCGCCGTCCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLAGHSL*QPPSPT Trigger: CGTGGGGGACGGCGGCTGCCAGAGTGAGTGCCCGGC...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGGGCCACGGTAGTGGCTaGCGCCGCCCCACTGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLGHGSG*RRPTDQ Trigger: CTGGTCAGTGGGGCGGCGGCAGCCACTACCGTGGCC...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGGACACTGCTCCCGGGTaGGGGCTCAGGTGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLDTAPG*GLRWGH Trigger: GTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTC...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR TCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGGCTGGGCGCCAGCGTaGAGCCCATGGCGGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVGWAPA*SPWRAP Trigger: GGGTGCCCGCCATGGGCTTCACGCTGGCGCCCAGCC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGTGCCACGAGGGCTTCTaGAGGCCGGCGTACCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLCHEGF*RPAYQR Trigger: CCGCTGGTACGCCGGCCTGCAGAAGCCCTCGTGGCA...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGCGGAGACCCTCGCCGTaGACAAAGCGGGAGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLRRPSP*TKREPT Trigger: CGTGGGCTCCCGCTTTGTCCACGGCGAGGGTCTCCG...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR TCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGGCTGGGCGCCAGCGTaGAGCCCATGGCGGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAGWAPA*SPWRAP Trigger: GGGTGCCCGCCATGGGCTTCACGCTGGCGCCCAGCC...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR TCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGAGGCTGCAACGCACCTaGGCCCCGCACTGGGAATCG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLRLQRT*APHWES Trigger: CGATTCCCAGTGCGGGGCTCAGGTGCGTTGCAGCCT...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396265.4 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLRGHGC*SCCSGE Trigger: CTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCG...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGAGCTGCAGTCCCTGGTaGGCCGGGCACTCACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLSCSPW*AGHSLW Trigger: CCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCT...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGTGCAGCTGCAGTCCCTaGTGGGCCGGGCACTCACTC | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLCSCSP*WAGHSL Trigger: GAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCA...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGTGGCTGAGTAGAGCGTaGCCCAGACAGGGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLWLSRA*PRQGPA Trigger: TGCTGGGCCCTGTCTGGGGCACGCTCTACTCAGCCA...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR GCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGGCCACGGTAGTGGCTaGCGCCGCCCCACTGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVGHGSG*RRPTDQ Trigger: CTGGTCAGTGGGGCGGCGGCAGCCACTACCGTGGCC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTGGCCACGGTAGTGGCTaGCGCCGCCCCACTGACCAG | + |
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Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPGHGSG*RRPTDQ Trigger: CTGGTCAGTGGGGCGGCGGCAGCCACTACCGTGGCC...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RTLLPGGGSGGATSEALLDGTCW*SCSPWW Trigger: CCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATC...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGCCGGGCACTCACTCTaGCAGCCGCCGTCCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAAGHSL*QPPSPT Trigger: CGTGGGGGACGGCGGCTGCCAGAGTGAGTGCCCGGC...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGACACTGCTCCCGGGTaGGGGCTCAGGTGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVDTAPG*GLRWGH Trigger: GTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCTGCCGCCGCCCCACTaGCCAGCAGGAGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPLPPPH*PAGDPP Trigger: TGGTGGATCTCCTGCTGGTCAGTGGGGCGGCGGCAG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGGCCACGGTAGTGGCTaGCGCCGCCCCACTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAGHGSG*RRPTDQ Trigger: CTGGTCAGTGGGGCGGCGGCAGCCACTACCGTGGCC...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTACCTGCTGGTGCAGCTaGAGTCCCTGGTGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPTCWCS*SPWWAG Trigger: CCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGT...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCCCAGGGCGGGGCCATaGCTGCTGCAGCTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPPRAGP*LLQLLF Trigger: GAACAGCAGCTGCAGCAGCCATGGCCCCGCCCTGGG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR TCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTGCCGTACCCCATGGCTaGGTAGAGCGTGCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPAVPHG*VERAPD Trigger: GTCTGGGGCACGCTCTACTCAGCCATGGGGTACGGC...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR TCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCACTGCCGCCGCCCCACTaGCCAGCAGGAGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAALPPPH*PAGDPP Trigger: TGGTGGATCTCCTGCTGGTCAGTGGGGCGGCGGCAG...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCCTCTGAAGCTCTGCTaGCCCCTGGGCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPPLKLC*PLGQGP Trigger: AGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPRGHGC*SCCSGE Trigger: CTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVRGHGC*SCCSGE Trigger: CTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCG...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCATGCCACGAGGGCTTCTaGAGGCCGGCGTACCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAACHEGF*RPAYQR Trigger: CCGCTGGTACGCCGGCCTGCAGAAGCCCTCGTGGCA...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGCCAGCGGGCTCACCTaGTACCAGGCCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVASGLT*YQATVV Trigger: CACTACCGTGGCCTGGTACCAGGTGAGCCCGCTGGC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCCCCCACGCCAGCCATaGTTGTCCCGCCATACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPPPRQP*LSRHTQ Trigger: CTGCGTATGGCGGGACAACCATGGCTGGCGTGGGGG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCCCCACGCCAGCCATaGTTGTCCCGCCATACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVPPRQP*LSRHTQ Trigger: CTGCGTATGGCGGGACAACCATGGCTGGCGTGGGGG...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCTGCAGCTGCAGTCCCTaGTGGGCCGGGCACTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVCSCSP*WAGHSL Trigger: GAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCA...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVDGTCW*SCSPWW Trigger: CCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCTCCGGGAAGGGCACTaGCTGGCAGGAGTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPLREGH*LAGVSQ Trigger: CTGGCTAACTCCTGCCAGGCAGTGCCCTTCCCGGAG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTAGGAGCCGTACCCCATaGCTGAGTAGAGCGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPRSRTP*LSRACP Trigger: GGGGCACGCTCTACTCAGCCATGGGGTACGGCTCCT...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGCCAGCGGGCTCACCTaGTACCAGGCCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAASGLT*YQATVV Trigger: CACTACCGTGGCCTGGTACCAGGTGAGCCCGCTGGC...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCATGCAGCTGCAGTCCCTaGTGGGCCGGGCACTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAACSCSP*WAGHSL Trigger: GAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCA...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCGTGATGGCACCTGCTaGTGCAGCTGCAGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVRDGTC*CSCSPW Trigger: CCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACG...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCAGCTCTGCTGACCCCTaGGCCAAGGCCCTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVSSADP*AKALTD Trigger: GTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCT...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR TCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCACAGGCCCAGTGGTCATaGAAGCGTGACGGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAQAQWS*KRDGHH Trigger: GTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTG...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCATGGCTGAGTAGAGCGTaGCCCAGACAGGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAAWLSRA*PRQGPA Trigger: TGCTGGGCCCTGTCTGGGGCACGCTCTACTCAGCCA...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR GCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAADGTCW*SCSPWW Trigger: CCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATC...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCAAGCGTGATGGCACCTaGTGGTGCAGCTGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVKRDGT*WCSCSP Trigger: GGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTT...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTAGTTCCGCCTGGGATTaGCCATCCGCGGAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPSSAWD*PSAEWA Trigger: TGCCCATTCCGCGGATGGGCAATCCCAGGCGGAACT...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAAGCTCTGCTGACCCCTaGGCCAAGGCCCTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAASSADP*AKALTD Trigger: GTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCT...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCAAGGGAGTTCCGCCTaGGATTGCCCATCCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPQGSSA*DCPSAE Trigger: TTCCGCGGATGGGCAATCCCAGGCGGAACTCCCTTG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
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| CDS-3UTR TCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCACCACATCACAAGCGTaGTGGCACCTGCTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVTTSQA*WHLLVQ Trigger: CTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGT...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCGGGCACCAAAGAAGATaGGGGGCCATGCCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDGHHITSVMAPAGAAAVGHQRR*GAMPSS Trigger: TGAACTGGGCATGGCCCCCCATCTTCTTTGGTGCCC...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR TCA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAACCACATCACAAGCGTaGTGGCACCTGCTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGHHITSVMAPAGAAATTSQA*WHLLVQ Trigger: CTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGT...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR TCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTGTCTCCCAGATATTCTaGGACCCTCAAGGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPVSQIF*DPQGSS Trigger: GGAACTCCCTTGAGGGTCTCAGAATATCTGGGAGAC...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCGGAGACCCTCGCCGTaGACAAAGCGGGAGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPRRPSP*TKREPT Trigger: CGTGGGCTCCCGCTTTGTCCACGGCGAGGGTCTCCG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
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| CDS-3UTR TCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGCCGTACCCCATGGCTaGGTAGAGCGTGCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPAVPHG*VERAPD Trigger: GTCTGGGGCACGCTCTACTCAGCCATGGGGTACGGC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCCTGGGCCAAGGCCCTaGCAGACTAGCAGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPPGPRP*QTSRPS Trigger: ACTGGGCCTGCTAGTCTGTCAGGGCCTTGGCCCAGG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCCTCTGAAGCTCTGCTaGCCCCTGGGCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPPLKLC*PLGQGP Trigger: AGGGCCTTGGCCCAGGGGTCAGCAGAGCTTCAGAGG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGCCAGCGGGCTCACCTaGTACCAGGCCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPASGLT*YQATVV Trigger: CACTACCGTGGCCTGGTACCAGGTGAGCCCGCTGGC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCAGCTGCAGTCCCTGGTaGGCCGGGCACTCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPSCSPW*AGHSLW Trigger: CCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCT...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCAAGACCCGTCTAGGCTaGAACGCACCTGAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPKTRLG*NAPEPR Trigger: GCGGGGCTCAGGTGCGTTGCAGCCTAGACGGGTCTT...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCAGGAGCCGTACCCCATaGCTGAGTAGAGCGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPRSRTP*LSRACP Trigger: GGGGCACGCTCTACTCAGCCATGGGGTACGGCTCCT...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCAGCTCTGCTGACCCCTaGGCCAAGGCCCTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPSSADP*AKALTD Trigger: GTCTGTCAGGGCCTTGGCCCAGGGGTCAGCAGAGCT...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGCTGGGCGCCAGCGTaGAGCCCATGGCGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTGWAPA*SPWRAP Trigger: GGGTGCCCGCCATGGGCTTCACGCTGGCGCCCAGCC...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTCATGTTCCAAGAACATaGTCTAAGCATGCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGHHITSVMAPAGAAAVPHVPRT*SKHAES Trigger: GCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATG...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGGGCACCAAAGAAGATaGGGGGCCATGCCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPGHQRR*GAMPSS Trigger: TGAACTGGGCATGGCCCCCCATCTTCTTTGGTGCCC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGTGGTCATGAAAGCGTaGCGGCCACCACATCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPVVMKA*RPPHHK Trigger: CTTGTGATGTGGTGGCCGTCACGCTTTCATGACCAC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACTGCCGCCGCCCCACTaGCCAGCAGGAGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTLPPPH*PAGDPP Trigger: TGGTGGATCTCCTGCTGGTCAGTGGGGCGGCGGCAG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGTCTCCCAGATATTCTaGGACCCTCAAGGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPVSQIF*DPQGSS Trigger: GGAACTCCCTTGAGGGTCTCAGAATATCTGGGAGAC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAACCTGCTGGTGCAGCTaGAGTCCCTGGTGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTTCWCS*SPWWAG Trigger: CCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACCCAGGGCGGGGCCATaGCTGCTGCAGCTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTPRAGP*LLQLLF Trigger: GAACAGCAGCTGCAGCAGCCATGGCCCCGCCCTGGG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACGGAGACCCTCGCCGTaGACAAAGCGGGAGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTRRPSP*TKREPT Trigger: CGTGGGCTCCCGCTTTGTCCACGGCGAGGGTCTCCG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAGCCAGCGGGCTCACCTaGTACCAGGCCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGASGLT*YQATVV Trigger: CACTACCGTGGCCTGGTACCAGGTGAGCCCGCTGGC...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACCCCCACGCCAGCCATaGTTGTCCCGCCATACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGPPRQP*LSRHTQ Trigger: CTGCGTATGGCGGGACAACCATGGCTGGCGTGGGGG...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAAGCTGCAGTCCCTGGTaGGCCGGGCACTCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGSCSPW*AGHSLW Trigger: CCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCT...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAAGCTGCAGTCCCTGGTaGGCCGGGCACTCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTSCSPW*AGHSLW Trigger: CCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGATGCAGCTGCAGTCCCTaGTGGGCCGGGCACTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGCSCSP*WAGHSL Trigger: GAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCA...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAGGGAAGGGCACTGCCTaGCAGGAGTTAGCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGGKGTA*QELARP Trigger: CGGCCTGGCTAACTCCTGCCAGGCAGTGCCCTTCCC...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583777.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACAGGCCCAGTGGTCATaGAAGCGTGACGGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTQAQWS*KRDGHH Trigger: GTGGTGGCCGTCACGCTTTCATGACCACTGGGCCTG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR GCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGATGGCTGAGTAGAGCGTaGCCCAGACAGGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGWLSRA*PRQGPA Trigger: TGCTGGGCCCTGTCTGGGGCACGCTCTACTCAGCCA...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAAGGAGCCGTACCCCATaGCTGAGTAGAGCGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTRSRTP*LSRACP Trigger: GGGGCACGCTCTACTCAGCCATGGGGTACGGCTCCT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAAAGCGTGATGGCACCTaGTGGTGCAGCTGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTKRDGT*WCSCSP Trigger: GGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACAAGGGAGTTCCGCCTaGGATTGCCCATCCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTQGSSA*DCPSAE Trigger: TTCCGCGGATGGGCAATCCCAGGCGGAACTCCCTTG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396265.4 |
||
| CDS-3UTR GCA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCATGTTCCAAGAACATaGTCTAAGCATGCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMFQEHALSMQKAQDTAPHVPRT*SKHAES Trigger: GCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR GCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAACAGGTCCCAGAGGCTaGTCGGCTCACAGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTTGPRG*SAHSKT Trigger: GGTCTTACTGTGAGCCGAGCAGCCTCTGGGACCTGT...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396265.4 |
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| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGGCACCAAAGAAGATaGGGGGCCATGCCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTGHQRR*GAMPSS Trigger: TGAACTGGGCATGGCCCCCCATCTTCTTTGGTGCCC...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGAGGGCACCAAAGAAGATaGGGGGCCATGCCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKFHVPRTCSKHAESTGGHQRR*GAMPSS Trigger: TGAACTGGGCATGGCCCCCCATCTTCTTTGGTGCCC...TCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS-3UTR CCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACATGTTCAGGGGAGCTCTaGGCTCCGGCTTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTCSGEL*APASLQ Trigger: TTGCAAAGAAGCCGGAGCCCAGAGCTCCCCTGAACA...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396265.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTATAAAATTCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACACATGTTCCAAGAACATaGTCTAAGCATGCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLIKFHVPRTCSKHAESTHVPRT*SKHAES Trigger: GCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATG...TGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGAATTTTATAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS TCA 90 bp | GGACAAAGCGGGAGCCCACGAAGCACCCCAGGCTGGGCGCCAGCGTaGAGCCCATGGCGGGCACCCAGGGCGGGGCCATGGCTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQSGSPRSTPGWAPA*SPWRAPRAGPWLLQ Trigger: CTGCAGCAGCCATGGCCCCGCCCTGGGTGCCCGCCATGGGCTTCACGCTGGCGCCCAGCCTGGGGTGCTTCGTGGGCTCCCGCTTTGTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000428336.5 ENST00000472378.1 |
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| CDS GCA 90 bp | CAGCGTGAAGCCCATGGCGGGCACCCAGGGCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAGCTCAGCGGCGAGGGCACGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QREAHGGHPGRGHGC*SCCSGELSGEGTLR Trigger: CCGGAGCGTGCCCTCGCCGCTGAGCTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCGCCCTGGGTGCCCGCCATGGGCTTCACGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000472378.1 |
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| CDS CCA 90 bp | CACGAGGGCTTCTGCAGGCCGGCGTACCAGCGGAGACCCTCGCCGTaGACAAAGCGGGAGCCCACGAAGCACCCCAGGCTGGGCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HEGFCRPAYQRRPSP*TKREPTKHPRLGAS Trigger: GCTGGCGCCCAGCCTGGGGTGCTTCGTGGGCTCCCGCTTTGTCCACGGCGAGGGTCTCCGCTGGTACGCCGGCCTGCAGAAGCCCTCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000428336.5 ENST00000472378.1 |
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| CDS CCA 90 bp | CATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTGGTaGGCCGGGCACTCACTCTGGCAGCCGCCGTCCCCCACGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HHKRDGTCWCSCSPW*AGHSLWQPPSPTPA Trigger: GGCTGGCGTGGGGGACGGCGGCTGCCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS CCA 90 bp | CCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTaGTGGGCCGGGCACTCACTCTGGCAGCCGCCGTCCCCCACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PHHKRDGTCWCSCSP*WAGHSLWQPPSPTP Trigger: TGGCGTGGGGGACGGCGGCTGCCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS GCA 90 bp | CAGCGTGAAGCCCATGGCGGGCACCCAGGGCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAGCTCTGGGCTCCGGCTTCTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QREAHGGHPGRGHGC*SCCSGELWAPASLQ Trigger: TTGCAAAGAAGCCGGAGCCCAGAGCTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCGCCCTGGGTGCCCGCCATGGGCTTCACGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396265.4 ENST00000428336.5 |
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| CDS GCA 90 bp | ACAGGTCCCAGAGGCTGCTCGGCTCACAGTAAGACCCGTCTAGGCTaGAACGCACCTGAGCCCCGCACTGGGAATCGAGGGCCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGPRGCSAHSKTRLG*NAPEPRTGNRGPGG Trigger: GCCCCCTGGCCCTCGATTCCCAGTGCGGGGCTCAGGTGCGTTGCAGCCTAGACGGGTCTTACTGTGAGCCGAGCAGCCTCTGGGACCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396265.4 ENST00000428336.5 |
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| CDS-3UTR CAA 90 bp | GACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCCTGAGTTCCGCCTGGGATaGCCCATCCGCGGAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGHHITSVMAPAGAAAVPEFRLG*PIRGMG Trigger: GCCCATTCCGCGGATGGGCAATCCCAGGCGGAACTC...AGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
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| CDS CCA 90 bp | ATCGACAGGCCCACAGCTTCCCCACCCTGGCTTGCCAAATGGGGCTaGGGAAACCATGCCATGGTCCATGGCCCGCCTGGAGAAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: IDRPTASPPWLAKWG*GNHAMVHGPPGEDP Trigger: AGGGTCTTCTCCAGGCGGGCCATGGACCATGGCATGGTTTCCCCAGCCCCATTTGGCAAGCCAGGGTGGGGAAGCTGTGGGCCTGTCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
||
| CDS-3UTR CAA 90 bp | AGGACACTGCTCCCGGGTGGGGGCTCAGGTGGGGCCACCTCTGAAGCTCTGCTGCAAGGCCCAGCCCATTaGTCGGGCACCAAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTLLPGGGSGGATSEALLQGPAH*SGTKED Trigger: ATCTTCTTTGGTGCCCGACAAATGGGCTGGGCCTTG...CAGCAGAGCTTCAGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS CCA 90 bp | TGTGCAATCGACAGGCCCACAGCTTCCCCACCCTGGCTTGCCAAATaGGGCTGGGGAAACCATGCCATGGTCCATGGCCCGCCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CAIDRPTASPPWLAK*GWGNHAMVHGPPGE Trigger: TTCTCCAGGCGGGCCATGGACCATGGCATGGTTTCCCCAGCCCCATTTGGCAAGCCAGGGTGGGGAAGCTGTGGGCCTGTCGATTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
||
| CDS-3UTR CAA 90 bp | CGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCTGGGCTCCGGCTTCTTaGCAAGGGGTAGGGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDGHHITSVMAPAGAAAVWAPAS*QGVGEA Trigger: TGCTTCCCCTACCCCTTGCAAAGAAGCCGGAGCCCA...GACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396265.4 |
||
| CDS TCA 90 bp | ACGGGGTGTCTCGGAGATCAAGAGCCCGAGGTCTCCCAGATATTCTaGGACCCTCAAGGGAGTTCCGCCTGGGATTGCCCATCCGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGCLGDQEPEVSQIF*DPQGSSAWDCPSAE Trigger: TTCCGCGGATGGGCAATCCCAGGCGGAACTCCCTTGAGGGTCTCAGAATATCTGGGAGACCTCGGGCTCTTGATCTCCGAGACACCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329563.8 ENST00000396265.4 ENST00000428336.5 |
||
| CDS-3UTR CAA 90 bp | AAGCGTGACGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCACAAGGCCCAGCCCATTaGTCGGGCACCAAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KRDGHHITSVMAPAGAAAQGPAH*SGTKED Trigger: ATCTTCTTTGGTGCCCGACAAATGGGCTGGGCCTTG...TGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCGTCACGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS-3UTR CAA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGAGTTCCGCCTGGGATaGCCCATCCGCGGAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SMFQEHALSMQKAQDTAPEFRLG*PIRGMG Trigger: GCCCATTCCGCGGATGGGCAATCCCAGGCGGAACTC...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329563.8 ENST00000396265.4 |
||
| CDS-3UTR CAA 90 bp | TCCATGTTCCAAGAACATGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCCAAGGCCCAGCCCATTaGTCGGGCACCAAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMFQEHALSMQKAQDTAPQGPAH*SGTKED Trigger: ATCTTCTTTGGTGCCCGACAAATGGGCTGGGCCTTG...GGGAGCAGTGTCCTGTGCTTTCTGCATGCTTAGAGCATGTTCTTGGAACATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
||
| CDS TCA 72 bp | GGGAGCCCACGAAGCACCCCAGGCTGGGCGCCAGCGTaGAGCCCATGGCGGGCACCCAGGGCGGGGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPRSTPGWAPA*SPWRAPRAGPW Trigger: CCATGGCCCCGCCCTGGGTGCCCGCCATGGGCTTCACGCTGGCGCCCAGCCTGGGGTGCTTCGTGGGCTCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000428336.5 ENST00000472378.1 |
||
| CDS GCA 72 bp | GCCCATGGCGGGCACCCAGGGCGGGGCCATGGCTGCTaGAGCTGCTGTTCAGGGGAGCTCAGCGGCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AHGGHPGRGHGC*SCCSGELSGEG Trigger: GCCCTCGCCGCTGAGCTCCCCTGAACAGCAGCTGCAGCAGCCATGGCCCCGCCCTGGGTGCCCGCCATGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000337554.8 ENST00000472378.1 |
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| CDS CCA 72 bp | TTCTGCAGGCCGGCGTACCAGCGGAGACCCTCGCCGTaGACAAAGCGGGAGCCCACGAAGCACCCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FCRPAYQRRPSP*TKREPTKHPRL Trigger: CAGCCTGGGGTGCTTCGTGGGCTCCCGCTTTGTCCACGGCGAGGGTCTCCGCTGGTACGCCGGCCTGCAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000428336.5 ENST00000472378.1 |
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| CDS GCA 72 bp | CAGCGGGCTCACCTGGTACCAGGCCACGGTAGTGGCTaGCGCCGCCCCACTGACCAGCAGGAGATCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: QRAHLVPGHGSG*RRPTDQQEIHQ Trigger: TTGGTGGATCTCCTGCTGGTCAGTGGGGCGGCGGCAGCCACTACCGTGGCCTGGTACCAGGTGAGCCCGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS CCA 72 bp | GGGCTGGGGAAACCATGCCATGGTCCATGGCCCGCCTaGAGAAGACCCTCTGTCCTGGGCCAGGCCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GLGKPCHGPWPA*RRPSVLGQASP Trigger: AGGGGAGGCCTGGCCCAGGACAGAGGGTCTTCTCCAGGCGGGCCATGGACCATGGCATGGTTTCCCCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
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| CDS GCA 72 bp | CGGCCACCACATCACAAGCGTGATGGCACCTGCTGGTaGAGCTGCAGTCCCTGGTGGGCCGGGCACTCACTC | + |
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Preference number: 6 (lower is better) Translates to: RPPHHKRDGTCW*SCSPWWAGHSL Trigger: GAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGGTGGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS GCA 72 bp | CCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTaGAGTCCCTGGTGGGCCGGGCACTCACTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PHHKRDGTCWCS*SPWWAGHSLWQ Trigger: CTGCCAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCACCAGCAGGTGCCATCACGCTTGTGATGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS CCA 72 bp | CCAAGGCCCAGCCCATTTGTCGGGCACCAAAGAAGATaGGGGGCCATGCCCAGTTCAGGGCCAGCTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PRPSPFVGHQRR*GAMPSSGPAAQ Trigger: CTGGGCAGCTGGCCCTGAACTGGGCATGGCCCCCCATCTTCTTTGGTGCCCGACAAATGGGCTGGGCCTTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000329563.8 ENST00000337554.8 ENST00000396265.4 ENST00000583777.5 |
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| CDS CCA 72 bp | CCCACAGCTTCCCCACCCTGGCTTGCCAAATGGGGCTaGGGAAACCATGCCATGGTCCATGGCCCGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PTASPPWLAKWG*GNHAMVHGPPG Trigger: TCCAGGCGGGCCATGGACCATGGCATGGTTTCCCCAGCCCCATTTGGCAAGCCAGGGTGGGGAAGCTGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
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| CDS CCA 72 bp | GACAGGCCCACAGCTTCCCCACCCTGGCTTGCCAAATaGGGCTGGGGAAACCATGCCATGGTCCATGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: DRPTASPPWLAK*GWGNHAMVHGP Trigger: CGGGCCATGGACCATGGCATGGTTTCCCCAGCCCCATTTGGCAAGCCAGGGTGGGGAAGCTGTGGGCCTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
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| CDS GCA 72 bp | AGAGGCTGCTCGGCTCACAGTAAGACCCGTCTAGGCTaGAACGCACCTGAGCCCCGCACTGGGAATCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RGCSAHSKTRLG*NAPEPRTGNRG Trigger: CCCTCGATTCCCAGTGCGGGGCTCAGGTGCGTTGCAGCCTAGACGGGTCTTACTGTGAGCCGAGCAGCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396265.4 ENST00000428336.5 |
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| CDS CAA 90 bp | GGTCTCCCAGATATTCTGAGACCCTCAAGGGAGTTCCGCCTGGGATaGCCCATCCGCGGAATGGGCAGGAGAGGGAGCGTCGGCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: GLPDILRPSREFRLG*PIRGMGRRGSVGHS Trigger: GGAGTGGCCGACGCTCCCTCTCCTGCCCATTCCGCGGATGGGCAATCCCAGGCGGAACTCCCTTGAGGGTCTCAGAATATCTGGGAGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428336.5 |
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| CDS CCA 72 bp | CCTGGCTTGCCAAATGGGGCTGGGGAAACCATGCCATaGTCCATGGCCCGCCTGGAGAAGACCCTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGLPNGAGETMP*SMARLEKTLCP Trigger: AGGACAGAGGGTCTTCTCCAGGCGGGCCATGGACCATGGCATGGTTTCCCCAGCCCCATTTGGCAAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472378.1 |
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