Pregenerated sensors for TSPAN8 (Homo sapiens)
Ensembl gene IDs: ENSG00000127324Ensembl transcript IDs: ENST00000247829.8, ENST00000393330.6, ENST00000546561.2, ENST00000549421.1, ENST00000550818.1, ENST00000552128.2, ENST00000552786.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTGGGTCCAGAAGGCATaGGGTCTGGAGCAACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTWVQKA*GLEQQA Trigger: GGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTATACCTGTCGCCACCTaGAGGAGCAGGATCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTIPVAT*RSRIRS Trigger: GCTTCTGATCCTGCTCCTGCAGGTGGCGACAGGTAT...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTGAGCAACAAGCCCACTaGACCTTGGCAGGAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTEQQAH*TLAGES Trigger: ACTCTCTCCTGCCAAGGTCCAGTGGGCTTGTTGCTC...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTACPAI*SGATCL Trigger: CAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGC...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTCCAGTTCCGAGATTaGAGAGATGTCTGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTFQFRD*RDVWVQ Trigger: CTGGACCCAGACATCTCTGCAATCTCGGAACTGGAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR CCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTCCTGCAATATGCTCTaGAGCAACTTGCCTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTSCNML*SNLPAE Trigger: CTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAAAGCCCACTGGACCTTaGCAGGAGAGAGTTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTKPTGP*QERVGM Trigger: CATCCCAACTCTCTCCTGCCAAGGTCCAGTGGGCTT...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAAGAAGGCATGAGGTCTaGAGCAACAAGCCCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTRRHEV*SNKPTG Trigger: TCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCT...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTACPAI*SGATCL Trigger: CAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGC...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTAGGTTTCCCTTCAATTaGACTCGTGCATGTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTRFPFN*TRACGS Trigger: ACTACCACATGCACGAGTGCAATTGAAGGGAAACCT...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACATCCTGCAATATGCTCTaGAGCAACTTGCCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTSCNML*SNLPAE Trigger: CTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGA...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTTCACTTTCCCCTGTaGCGCTCAAAAGCTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTFHFPL*RSKALC Trigger: ACACAAAGCTTTTGAGCGCCACAGGGGAAAGTGAAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTCAGAAGCAAGCCTATaGAAAACAACAGAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTSEASL*KTTEAC Trigger: GCATGCTTCTGTTGTTTTTCATAGGCTTGCTTCTGA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTAACTTGCTAGTACCTTaGCAAGAAGTGGTGTATTCC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTNLLVP*QEVVYS Trigger: GGAATACACCACTTCTTGTCAAGGTACTAGCAAGTT...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTLEQLA*RDFCIH Trigger: GTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTACCTTGACAAGAAGTaGTGTATTCCAGTTCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTYLDKK*CIPVPR Trigger: TCTCGGAACTGGAATACACCACTTCTTGTCAAGGTA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR TCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAGAGTTGGGATGTTTGTaGACCAGTTCTTCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTELGCL*TSSSIC Trigger: ACAGATGGAAGAACTGGTTCACAAACATCCCAACTC...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTGCTTGAGAGTCATTaGTTACTCGTACCCATATTG | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTLLESH*LLVPIL Trigger: CAATATGGGTACGAGTAAGCAATGACTCTCAAGCAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACATTTCACTTTCCCCTGTaGCGCTCAAAAGCTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTFHFPL*RSKALC Trigger: ACACAAAGCTTTTGAGCGCCACAGGGGAAAGTGAAA...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACATCAGAAGCAAGCCTATaGAAAACAACAGAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTSEASL*KTTEAC Trigger: GCATGCTTCTGTTGTTTTTCATAGGCTTGCTTCTGA...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACATTTGTTCCCGATCTaGCAATACAGGACCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTHLFPI*QYRTIE Trigger: TTCTATGGTCCTGTATTGCCAGATCGGGAACAAATG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAGAACCAAAAATTGCTTaGGAGTCATTGCTTACTCGT | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTEPKIA*ESLLTR Trigger: ACGAGTAAGCAATGACTCTCAAGCAATTTTTGGTTC...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAACTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKLEQLA*RDFCIH Trigger: GTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAG...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAGTTACAGGCTTGTCCTaGAATATGCTCTGGAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKVTGLS*NMLWSN Trigger: GTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAAC...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTCAGAACCAAAAATTaGTTGAGAGTCATTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTFRTKN*LRVIAY Trigger: GTAAGCAATGACTCTCAAGCAATTTTTGGTTCTGAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTACAATTATGGCTTCCTaGAATTGTTTTTCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: DICGLASRDILKRQLLLTTIMAS*NCFSLS Trigger: GGAAAGTGAAAAACAATTCCAGGAAGCCATAATTGT...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAACACATTTCCTCCTCCTaGACAGCTATCTCTACTACA | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKHISSS*TAISTT Trigger: TGTAGTAGAGATAGCTGTTCAGGAGGAGGAAATGTG...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR CCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAATTTCACTTTCCCCTGTaGCGCTCAAAAGCTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKFHFPL*RSKALC Trigger: ACACAAAGCTTTTGAGCGCCACAGGGGAAAGTGAAA...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAATCAGAAGCAAGCCTATaGAAAACAACAGAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKSEASL*KTTEAC Trigger: GCATGCTTCTGTTGTTTTTCATAGGCTTGCTTCTGA...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR GCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACATTCAGAACCAAAAATTaGTTGAGAGTCATTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTFRTKN*LRVIAY Trigger: GTAAGCAATGACTCTCAAGCAATTTTTGGTTCTGAA...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAACAATTATGGCTTCCTaGAATTGTTTTTCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASRDILKRQLLLTYIALTTIMAS*NCFSLS Trigger: GGAAAGTGAAAAACAATTCCAGGAAGCCATAATTGT...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAGAAATCTCTCCTAAATaGTCACGCTCTCAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKEISPK*SRSQNS Trigger: TGAATTCTGAGAGCGTGATCATTTAGGAGAGATTTC...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS-3UTR GCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAATTGCTTGAGAGTCATTaGTTACTCGTACCCATATTG | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKLLESH*LLVPIL Trigger: CAATATGGGTACGAGTAAGCAATGACTCTCAAGCAA...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAACAATTATGGCTTCCTaGAATTGTTTTTCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKTIMAS*NCFSLS Trigger: GGAAAGTGAAAAACAATTCCAGGAAGCCATAATTGT...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAATATCGTTCCAGGAATaGAAATCTCTCCTAAATGAT | + |
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Preference number: 4 (lower is better) Translates to: CSICLEDICGLASRDILKISFQE*KSLLND Trigger: ATCATTTAGGAGAGATTTCCATTCCTGGAACGATAT...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS TCA 90 bp | GTATTCCAGTTCCGAGATTGCAGAGATGTCTGGGTCCAGAAGGCATaGGGTCTGGAGCAACAAGCCCACTGGACCTTGGCAGGAGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VFQFRDCRDVWVQKA*GLEQQAHWTLAGES Trigger: ACTCTCTCCTGCCAAGGTCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCAGACATCTCTGCAATCTCGGAACTGGAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS GCA 90 bp | GGAGCAACTTGCCTGCAGAGATTTCTGTATCCACGGTGTGCTAGCTaGTGTATGTACACGGATAAATCAGATGGTCTTATCTCCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GATCLQRFLYPRCAS*CMYTDKSDGLISQQ Trigger: CTGCTGGGAGATAAGACCATCTGATTTATCCGTGTACATACAGCAGCTAGCACACCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS TCA 90 bp | GCAACAAGCCCACTGGACCTTGGCAGGAGAGAGTTGGGATGTTTGTaGACCAGTTCTTCCATCTGTTTAGTTGTTTTCTGGAGGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ATSPLDLGRRELGCL*TSSSICLVVFWREE Trigger: TTCTTCCCTCCAGAAAACAACTAAACAGATGGAAGAACTGGTTCACAAACATCCCAACTCTCTCCTGCCAAGGTCCAGTGGGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS GCA 90 bp | ATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCACGGTGTGCTAGCTGCTGTATGTACA | + |
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Preference number: 5 (lower is better) Translates to: IRYRLVLQYALEQLA*RDFCIHGVLAAVCT Trigger: TGTACATACAGCAGCTAGCACACCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS GCA 90 bp | AACTATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTaGCTGCAGAGATTTCTGTATCCACGGTGTGCTAGCTGCTGTATG | + |
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Preference number: 5 (lower is better) Translates to: NYSLQACPAICSGAT*LQRFLYPRCASCCM Trigger: CATACAGCAGCTAGCACACCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS GCA 90 bp | ATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCACGGCTTCAGAGCAGAAAGAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: IRYRLVLQYALEQLA*RDFCIHGFRAERES Trigger: GCTTTCTCTTTCTGCTCTGAAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
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| CDS GCA 90 bp | AACTATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTaGCTGCAGAGATTTCTGTATCCACGGCTTCAGAGCAGAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: NYSLQACPAICSGAT*LQRFLYPRLQSRKR Trigger: TCTCTTTCTGCTCTGAAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTGGCAAGTATGTTCCTTaGCTTGTCATAGCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTGKYVP*LVIAPG Trigger: CCCAGGAGCTATGACAAGCAAAGGAACATACTTGCC...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000247829.8 |
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| CDS GCA 90 bp | AGATGCCGTGAATTTAACTATTCGTTACAGGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTGCAGAGATTTCTGTATCCACGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RCREFNYSLQACPAI*SGATCLQRFLYPRT Trigger: TGTCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTTAAATTCACGGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000550818.1 ENST00000552786.1 |
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| CDS GCA 90 bp | AGATGCCGTGAATTTAACTATTCGTTACAGGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTGCAGAGATTTCTGTATCCACGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCREFNYSLQACPAI*SGATCLQRFLYPRC Trigger: ACACCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTTAAATTCACGGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS GCA 90 bp | AGATGCCGTGAATTTAACTATTCGTTACAGGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTGCAGAGATTTCTGTATCCACGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RCREFNYSLQACPAI*SGATCLQRFLYPRL Trigger: AAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTTAAATTCACGGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTCTATTCGTTACAGGCTaGTCCTGCAATATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTLFVTG*SCNMLW Trigger: CCAGAGCATATTGCAGGACAAGCCTGTAACGAATAG...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTCAATCAGCAGCTCCATaGACCAAACCGCAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTQSAAP*TKPQHL Trigger: TAAATGCTGCGGTTTGGTCAATGGAGCTGCTGATTG...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS TCA 90 bp | GATGGTCTTATCTCCCAGCAGTTCATAGTCAACTTGCTAGTACCTTaGCAAGAAGTGGTGTATTCCAGTTCCGAGATTGCAGAGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGLISQQFIVNLLVP*QEVVYSSSEIAEMS Trigger: AGACATCTCTGCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTACTAGCAAGTTGACTATGAACTGCTGGGAGATAAGACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS GCA 90 bp | ATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCACGGACATTTAAATATCGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IRYRLVLQYALEQLA*RDFCIHGHLNIAKA Trigger: AGCCTTTGCGATATTTAAATGTCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000550818.1 ENST00000552786.1 |
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| CDS TCA 90 bp | GCATGTGGTAGTGATATCGTTCCAGGAATGGAAATCTCTCCTAAATaGTCACGCTCTCAGAATTCACATTTCCTCCTCCTGAACAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ACGSDIVPGMEISPK*SRSQNSHFLLLNSY Trigger: ATAGCTGTTCAGGAGGAGGAAATGTGAATTCTGAGAGCGTGATCATTTAGGAGAGATTTCCATTCCTGGAACGATATCACTACCACATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS CCA 90 bp | CCTTCAATTGCACTCGTGCATGTGGTAGTGATATCGTTCCAGGAATaGAAATCTCTCCTAAATGATCACGCTCTCAGAATTCACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSIALVHVVVISFQE*KSLLNDHALRIHIS Trigger: GGAAATGTGAATTCTGAGAGCGTGATCATTTAGGAGAGATTTCCATTCCTGGAACGATATCACTACCACATGCACGAGTGCAATTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACTATTCGTTACAGGCTaGTCCTGCAATATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTLFVTG*SCNMLW Trigger: CCAGAGCATATTGCAGGACAAGCCTGTAACGAATAG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACAATCAGCAGCTCCATaGACCAAACCGCAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTQSAAP*TKPQHL Trigger: TAAATGCTGCGGTTTGGTCAATGGAGCTGCTGATTG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTGACTGACGATAGGTaGATGCATCCACAGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTLTDDR*MHPQIH Trigger: ATGAATCTGTGGATGCATCAACCTATCGTCAGTCAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTCAACTTGCTAGTACCTaGACAAGAAGTGGTGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTQLAST*TRSGVF Trigger: GAATACACCACTTCTTGTCAAGGTACTAGCAAGTTG...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS GCA 90 bp | AACTATTCGTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTaGCTGCAGAGATTTCTGTATCCACGGACATTTAAATATCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NYSLQACPAICSGAT*LQRFLYPRTFKYRK Trigger: TTTGCGATATTTAAATGTCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000550818.1 ENST00000552786.1 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTTACTCGTACCCATATaGCTAATGCTAGGATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTLLVPI*LMLGSR Trigger: TCTTGATCCTAGCATTAGCAATATGGGTACGAGTAA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTGGCGCTCAAAAGCTTaGTGTTTTCATAGAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DICGLASRDILKRQLLLTWRSKA*CFHREF Trigger: AAACTCTCTATGAAAACACAAAGCTTTTGAGCGCCA...AGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGCTAGACCACAGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACATCCACAGATTCATTaGTTCCCGATCTGGCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTHPQIH*FPIWQY Trigger: GTATTGCCAGATCGGGAACAAATGAATCTGTGGATG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAATTCCAGTTCCGAGATaGCAGAGATGTCTGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKIPVPR*QRCLGP Trigger: TGGACCCAGACATCTCTGCAATCTCGGAACTGGAAT...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACATTACTCGTACCCATATaGCTAATGCTAGGATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTLLVPI*LMLGSR Trigger: TCTTGATCCTAGCATTAGCAATATGGGTACGAGTAA...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACAAGAACCAAAAATTGCTaGAGAGTCATTGCTTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTRTKNC*RVIAYS Trigger: CGAGTAAGCAATGACTCTCAAGCAATTTTTGGTTCT...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACGATCAGACTTAGATTaGAAAACAGCTCCTAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTRSDLD*KTAPRI Trigger: TATCCTAGGAGCTGTTTTCAAATCTAAGTCTGATCG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAACAATCAGCAGCTCCATaGACCAAACCGCAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKQSAAP*TKPQHL Trigger: TAAATGCTGCGGTTTGGTCAATGGAGCTGCTGATTG...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCCGAGACATTTTAAAAAGACAGCTGCTCCTGACTTATATAGCACTTACACTTCAGAACCAAAAATaGCTTGAGAGTCATTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASRDILKRQLLLTYIALTLQNQK*LESHCL Trigger: TAAGCAATGACTCTCAAGCAATTTTTGGTTCTGAAG...TGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAATTGACTGACGATAGGTaGATGCATCCACAGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKLTDDR*MHPQIH Trigger: ATGAATCTGTGGATGCATCAACCTATCGTCAGTCAA...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAAAGAACCAAAAATTGCTaGAGAGTCATTGCTTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKRTKNC*RVIAYS Trigger: CGAGTAAGCAATGACTCTCAAGCAATTTTTGGTTCT...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAACGATCAGACTTAGATTaGAAAACAGCTCCTAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKRSDLD*KTAPRI Trigger: TATCCTAGGAGCTGTTTTCAAATCTAAGTCTGATCG...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAATGGCGCTCAAAAGCTTaGTGTTTTCATAGAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKWRSKA*CFHREF Trigger: AAACTCTCTATGAAAACACAAAGCTTTTGAGCGCCA...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAATATGTCTAGAAGATATCTGTGGTCTAGCTAGCCGAGACATTTTAAAACTTCAGAACCAAAAATaGCTTGAGAGTCATTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSICLEDICGLASRDILKLQNQK*LESHCL Trigger: TAAGCAATGACTCTCAAGCAATTTTTGGTTCTGAAG...TTTTAAAATGTCTCGGCTAGCTAGACCACAGATATCTTCTAGACATATTGAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS TCA 72 bp | TTCCGAGATTGCAGAGATGTCTGGGTCCAGAAGGCATaGGGTCTGGAGCAACAAGCCCACTGGACCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRDCRDVWVQKA*GLEQQAHWTLA Trigger: TGCCAAGGTCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCAGACATCTCTGCAATCTCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS TCA 72 bp | TTCCGAGATTGCAGAGATGTCTGGGTCCAGAAGGCATaGGGTCTGGAGCAACAAGCCCACTGGACCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FRDCRDVWVQKA*GLEQQAHWTSL Trigger: GAGACTGGTCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCAGACATCTCTGCAATCTCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549421.1 |
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| CDS CCA 72 bp | ATTGCAGAGATGTCTGGGTCCAGAAGGCATGAGGTCTaGAGCAACAAGCCCACTGGACCTTGGCAGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IAEMSGSRRHEV*SNKPTGPWQER Trigger: TCTCTCCTGCCAAGGTCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCAGACATCTCTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
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| CDS GCA 72 bp | AGGCTTGTCCTGCAATATGCTCTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCACGGTGTGCTAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLVLQYALEQLA*RDFCIHGVLAA Trigger: AGCAGCTAGCACACCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS CCA 72 bp | ATTGCAGAGATGTCTGGGTCCAGAAGGCATGAGGTCTaGAGCAACAAGCCCACTGGACCAGTCTCATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: IAEMSGSRRHEV*SNKPTGPVSCF Trigger: AAAACATGAGACTGGTCCAGTGGGCTTGTTGCTCCAGACCTCATGCCTTCTGGACCCAGACATCTCTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549421.1 |
||
| CDS GCA 72 bp | AGGCTTGTCCTGCAATATGCTCTGGAGCAACTTGCCTaGAGAGATTTCTGTATCCACGGCTTCAGAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLVLQYALEQLA*RDFCIHGFRAE Trigger: TTCTGCTCTGAAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
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| CDS GCA 72 bp | TTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTTaGCTGCAGAGATTTCTGTATCCACGGCTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQACPAICSGAT*LQRFLYPRLQS Trigger: GCTCTGAAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
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| CDS CAA 72 bp | GTTACAGGCTTGTCCTGCAATATGCTCTGGAGCAACTaGCCTGCAGAGATTTCTGTATCCACGGCTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTGLSCNMLWSN*PAEISVSTASE Trigger: CTCTGAAGCCGTGGATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546561.2 |
||
| CDS CAA 72 bp | TACCTTGACAAGAAGTGGTGTATTCCAGTTCCGAGATaGCAGAGATGTCTGGGTCCAGAAGGCATGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLDKKWCIPVPR*QRCLGPEGMRS Trigger: AGACCTCATGCCTTCTGGACCCAGACATCTCTGCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393330.6 ENST00000549421.1 |
||
| CDS GCA 72 bp | TGCCTGCAGAGATTTCTGTATCCACGGTGTGCTAGCTaGTGTATGTACACGGATAAATCAGATGGTCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: CLQRFLYPRCAS*CMYTDKSDGLI Trigger: GATAAGACCATCTGATTTATCCGTGTACATACAGCAGCTAGCACACCGTGGATACAGAAATCTCTGCAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS CAA 72 bp | CTTGGATTCATCTTCCATCATTTACTGGAAACAGTTTaGCCGGTCTCCTGCCATACCCAAGGCTTCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGFIFHHLLETV*PVSCHTQGFSV Trigger: AACTGAGAAGCCTTGGGTATGGCAGGAGACCGGCAAAACTGTTTCCAGTAAATGATGGAAGATGAATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552128.2 |
||
| CDS CAA 72 bp | CAGAGATTTCTGTATCCACGGCAACTTGCTAGTACCTaGACAAGAAGTGGTGTATTCCAGTTCCGAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRFLYPRQLAST*TRSGVFQFRDC Trigger: GCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTACTAGCAAGTTGCCGTGGATACAGAAATCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549421.1 |
||
| CDS CAA 90 bp | AGATGGTCTTATCTCCCAGCAGTTCATAGTCAACTTGCTAGTACCTaGACAAGAAGTGGTGTATTCCAGTTCCGAGATTGCAGAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RWSYLPAVHSQLAST*TRSGVFQFRDCRDV Trigger: GACATCTCTGCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTACTAGCAAGTTGACTATGAACTGCTGGGAGATAAGACCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS TCA 72 bp | AGAGATTTCTGTATCCACGGCAACTTGCTAGTACCTTaGCAAGAAGTGGTGTATTCCAGTTCCGAGATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RDFCIHGNLLVP*QEVVYSSSEIA Trigger: TGCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTACTAGCAAGTTGCCGTGGATACAGAAATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549421.1 |
||
| CDS CCA 72 bp | GCACTCGTGCATGTGGTAGTGATATCGTTCCAGGAATaGAAATCTCTCCTAAATGATCACGCTCTCAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: ALVHVVVISFQE*KSLLNDHALRI Trigger: AATTCTGAGAGCGTGATCATTTAGGAGAGATTTCCATTCCTGGAACGATATCACTACCACATGCACGAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS CAA 72 bp | TATCTCCCAGCAGTTCATAGTCAACTTGCTAGTACCTaGACAAGAAGTGGTGTATTCCAGTTCCGAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLPAVHSQLAST*TRSGVFQFRDC Trigger: GCAATCTCGGAACTGGAATACACCACTTCTTGTCAAGGTACTAGCAAGTTGACTATGAACTGCTGGGAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393330.6 |
||
| CDS CAA 72 bp | TTGACTGACGATAGGTTGATGCATCCACAGATTCATTaGTTCCCGATCTGGCAATACAGGACCATAGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LTDDRLMHPQIH*FPIWQYRTIEN Trigger: GTTTTCTATGGTCCTGTATTGCCAGATCGGGAACAAATGAATCTGTGGATGCATCAACCTATCGTCAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 ENST00000552128.2 |
||
| CDS GCA 72 bp | GAATTTAACTATTCGTTACAGGCTTGTCCTGCAATATaGTCTGGAGCAACTTGCCTGCAGAGATTTCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: EFNYSLQACPAI*SGATCLQRFLY Trigger: ATACAGAAATCTCTGCAGGCAAGTTGCTCCAGAGCATATTGCAGGACAAGCCTGTAACGAATAGTTAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 ENST00000550818.1 ENST00000552786.1 |
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| CDS CAA 90 bp | CAGAACCAAAAATTGCTTGAGAGTCATTGCTTACTCGTACCCATATaGCTAATGCTAGGATCAAGATACCACATAGCCAGAACAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QNQKLLESHCLLVPI*LMLGSRYHIARTRS Trigger: ACTTCTTGTTCTGGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAATGACTCTCAAGCAATTTTTGGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS CAA 72 bp | AAATTGCTTGAGAGTCATTGCTTACTCGTACCCATATaGCTAATGCTAGGATCAAGATACCACATAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: KLLESHCLLVPI*LMLGSRYHIAR Trigger: TCTGGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAATGACTCTCAAGCAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247829.8 ENST00000393330.6 ENST00000546561.2 |
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| CDS CAA 72 bp | AAATTGCTTGAGAGTCATTGCTTACTCGTACCCATATaGCTAATGCTAGGATCAAGATACCACATAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: KLLESHCLLVPI*LMLGSRYHIAC Trigger: ACAAGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAATGACTCTCAAGCAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552786.1 |
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| CDS CAA 90 bp | CAGAACCAAAAATTGCTTGAGAGTCATTGCTTACTCGTACCCATATaGCTAATGCTAGGATCAAGATACCACATAGCTTGTTTTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: QNQKLLESHCLLVPI*LMLGSRYHIACFSI Trigger: AATGGAAAAACAAGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAATGACTCTCAAGCAATTTTTGGTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552786.1 |
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| CDS TCA 72 bp | TTTTACCACAGAGTCCTTAAATTAGGGAGGCCTGCTTaGTATACAACTAAGGAAAATTGTCCTTTAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: FYHRVLKLGRPA*YTTKENCPLIK Trigger: CTTAATTAAAGGACAATTTTCCTTAGTTGTATATCAAGCAGGCCTCCCTAATTTAAGGACTCTGTGGTAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550818.1 |
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