RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000156298

Ensembl transcript IDs: ENST00000286824.6, ENST00000378482.7, ENST00000471410.5, ENST00000475216.5, ENST00000480976.5, ENST00000488893.5, ENST00000494037.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGCCCATGCAGGGCCTCGGGGTGAGGTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACA +
Preference number: 1 (lower is better)
Translates to: GWPMQGLGVRFTRTS*RGTWLHSVAQQGFT
Trigger: TGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCATGGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR GCA 90 bp GGCATTTACCACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATaGAGGGCCCAAAGGGGCCAGCGATGGTGTGATAACCAGTCACCG +
Preference number: 1 (lower is better)
Translates to: GIYHSEELTGASHTT*RAQRGQRWCDNQSP
Trigger: CGGTGACTGGTTATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR GCA 90 bp GTTCTGCACACCACAGCAGCTCAGGCTGCGCTGCACATGGTCCACTaGCCGGCTCCTCTCATCATTGCCATTGTAAGTCTGCATAGCGTC +
Preference number: 1 (lower is better)
Translates to: VLHTTAAQAALHMVH*PAPLIIAIVSLHSV
Trigger: GACGCTATGCAGACTTACAATGGCAATGATGAGAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTGGTGTGCAGAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR CCA 90 bp AGGGGGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATaGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGG +
Preference number: 1 (lower is better)
Translates to: RGTWLHSVAQQGFTK*TLHVTWAERWSRDW
Trigger: CCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR CCA 90 bp ACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATaGTGTGATAACCAGTCACCGATGATGAGTTGCAGTTGGACCAAG +
Preference number: 1 (lower is better)
Translates to: TGASHTTCRAQRGQR*CDNQSPMMSCSWTK
Trigger: CTTGGTCCAACTGCAACTCATCATCGGTGACTGGTTATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR TCA 90 bp GGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTG +
Preference number: 1 (lower is better)
Translates to: GTTGLHKMDTTRDVG*KVEQRLGGSVSCTL
Trigger: CAACGTGCAACTGACACTCCCACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR CCA 90 bp CAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTaGAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTA +
Preference number: 1 (lower is better)
Translates to: QGFTKWTLHVTWAER*SRDWVGVSVARCGV
Trigger: TACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR TCA 90 bp TACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGGGAGTGTCAG +
Preference number: 1 (lower is better)
Translates to: YTLWHNRASQNGHYT*RGLKGGAETGWECQ
Trigger: CTGACACTCCCACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR TCA 90 bp CTATCGTCTGCTTATCTACTTAAAGGTGTGTGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: LSSAYLLKGVWHLPQ*GANRSLPHYMQGPK
Trigger: CTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCACACACCTTTAAGTAGATAAGCAGACGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR GCA 90 bp ACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATGCACTAAACTaGCTACACATACCCAGGTATGTAACAAGCAAGGAGGCCACCTCA +
Preference number: 1 (lower is better)
Translates to: TGLYRFQPRGKDALN*LHIPRYVTSKEATS
Trigger: TGAGGTGGCCTCCTTGCTTGTTACATACCTGGGTATGTGTAGGCAGTTTAGTGCATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR GCA 90 bp CAGCTTTGTAACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATaGACTAAACTGCCTACACATACCCAGGTATGTAACAAGCAAGGA +
Preference number: 1 (lower is better)
Translates to: QLCNRVIQVSTERQR*TKLPTHTQVCNKQG
Trigger: TCCTTGCTTGTTACATACCTGGGTATGTGTAGGCAGTTTAGTGCATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGTTACAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR CCA 90 bp GAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTaGAAGTCTTTCAAAGATTGCTGCAGTTCCTTTTTAAAACAGGTC +
Preference number: 1 (lower is better)
Translates to: EGAGQVYYVLCSNIL*KSFKDCCSSFLKQV
Trigger: GACCTGTTTTAAAAAGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCTACAGATGGAGGGGCTaGCCCATGCAGGGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSYRWRG*PMQGLG
Trigger: CCCGAGGCCCTGCATGGGCCAGCCCCTCCATCTGTA...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR GCA 90 bp GCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCATGCCAATTAACTGGGAGCAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 2 (lower is better)
Translates to: AVMNRDRQQASSMPINWEQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...CTCCCAGTTAATTGGCATGCTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp GCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCATGCCAATTAACTGGGAGAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: AVMNRDRQQASSMPINWERLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...CTCCCAGTTAATTGGCATGCTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR GCA 90 bp GCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGGGTGGGAGTGTCAGTTaGACGTTGTGGGGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: ANRSLPHYMQGPKGPAMVGGSVS*TLWGKG
Trigger: CCCCTTACCCCACAACGTGCAACTGACACTCCCACC...CACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR GCA 90 bp GCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTGCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 2 (lower is better)
Translates to: AGAPVGVVLHTTAAQAALHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...CAGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 2 (lower is better)
Translates to: QEPPTLHAGPKGASDGVISCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR GCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 2 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR GCA 90 bp ACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 2 (lower is better)
Translates to: TGASHTTCRAQRGQRWCDFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...ATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR GCA 90 bp GGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 2 (lower is better)
Translates to: GWCSSWCSSAHHSSSGCAFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...AGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR GCA 90 bp CACCATCTCATACTGATTGGCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 2 (lower is better)
Translates to: HHLILIGRDEPGQTAGQQHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...CTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGCCAATCAGTATGAGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGTACAGATGGAGGGGCTaGCCCATGCAGGGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVYRWRG*PMQGLG
Trigger: CCCGAGGCCCTGCATGGGCCAGCCCCTCCATCTGTA...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR TCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCTGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 2 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR GCA 90 bp CTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACCAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 2 (lower is better)
Translates to: LATLCGTTGLHKMDTTRDQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...GTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR CCA 90 bp GAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: EQRLGGSVSCTLWGKGERTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...CCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 2 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR CCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp GCTCCAGGAAGTAGGGGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 2 (lower is better)
Translates to: APGSRGWCSSWCSSAHHSPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...GCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR CCA 90 bp GCCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTAGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: ARNTRDRNMAYSFSIHGLVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...TAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTAGGTGGAGCAGAGACTaGGTGGGAGTGTCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWARWSRD*VGVSVA
Trigger: TGCAACTGACACTCCCACCCAGTCTCTGCTCCACCT...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp AACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: NPEMPATSSARNTRDRNMNGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...CATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp GCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATAACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 2 (lower is better)
Translates to: ASKQAKDNNSGASSDEHITRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...TATGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp CTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACTGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: LATLCGTTGLHKMDTTRDWHLPQ*GANRSL
Trigger: GAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCA...GTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR CCA 90 bp CATGACGAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: HDETQTLKCQLRAQPGTPTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...TGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp ATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAGACCTTCCCTGACTTaGAGAACCACCAACGCCAGC +
Preference number: 2 (lower is better)
Translates to: MAYSFSIHGLPRHVAKHPRPSLT*RTTNAS
Trigger: GCTGGCGTTGGTGGTTCTTCAAGTCAGGGAAGGTCT...TGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
3UTR-3UTR TCA 90 bp TGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCTATAGACCTTCCCTaGCTTGAAGAACCACCAACG +
Preference number: 2 (lower is better)
Translates to: CQLRAQPGTPGTETWHTVSIDLP*LEEPPT
Trigger: CGTTGGTGGTTCTTCAAGTCAGGGAAGGTCTATAGA...AACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
3UTR-3UTR CCA 90 bp TCCGATGAGCACATAGGGAGCATTTGTGGAGTTCTCGGCAATAAGGGAGATATAGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SDEHIGSICGVLGNKGDIVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...TATATCTCCCTTATTGCCGAGAACTCCACAAATGCTCCCTATGTGCTCATCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp TTAACTTTGGTGGCGGCCACAGTCAGATTGTGTAGATCCTGGGGATTACAATCAAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 2 (lower is better)
Translates to: LTLVAATVRLCRSWGLQSSCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...TGATTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR TCA 90 bp CAACAACACAGCTTTGTAACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATTGCAGGGCCTCGGGGTaGGGTTCACTAGGACTAGCT +
Preference number: 2 (lower is better)
Translates to: QQHSFVTGLYRFQPRGKDCRASG*GSLGLA
Trigger: AGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCA...ATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGTTACAAAGCTGTGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR GCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: QEPPTLHAGPKGASDGVIVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR TCA 90 bp TTATTGAAGTGTTTCGTTACATGTCTTAGGCAGCCTGAAGAAGGTAGGAAAGCCACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 2 (lower is better)
Translates to: LLKCFVTCLRQPEEGRKATRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...GGCTTTCCTACCTTCTTCAGGCTGCCTAAGACATGTAACGAAACACTTCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR TCA 90 bp GGGAGCATTTGTGGAGTTCTCGGCAATAAGGGAGATATAGGTGCCCAGAGTAAGGCAGGATCACCCCAGTaGTCTGATTTTCCAAGACAA +
Preference number: 2 (lower is better)
Translates to: GSICGVLGNKGDIGAQSKAGSPQ*SDFPRQ
Trigger: TTGTCTTGGAAAATCAGATCACTGGGGTGATCCTGC...CTTACTCTGGGCACCTATATCTCCCTTATTGCCGAGAACTCCACAAATGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
3UTR-3UTR CCA 90 bp GGACAATTATTGAAGTGTTTCGTTACATGTCTTAGGCAGCCTGAAGAAGGTAGGGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GQLLKCFVTCLRQPEEGRVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...CCTACCTTCTTCAGGCTGCCTAAGACATGTAACGAAACACTTCAATAATTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR CCA 90 bp GGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 2 (lower is better)
Translates to: GAGQVYYVLCSNILWKSFSCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...GAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR TCA 90 bp ACAACACAGCTTTGTAACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATGCAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TTQLCNRVIQVSTERQRCNGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...GCATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGTTACAAAGCTGTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR CCA 90 bp CAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: QVYYVLCSNILWKSFKDCRLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...GCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAATCACCCCAGTGATCTaGTTTTCCAAGACAACATGC +
Preference number: 2 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVITPVI*FSKTTC
Trigger: GCATGTTGTCTTGGAAAATCAGATCACTGGGGTGAT...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
3UTR-3UTR CCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTCAAAGGGGCCAGCGATaGTGTGATAACCAGTCACCG +
Preference number: 2 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPQRGQR*CDNQSP
Trigger: CGGTGACTGGTTATCACACCATCGCTGGCCCCTTTG...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR CCA 90 bp GGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCCAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 2 (lower is better)
Translates to: GAGQVYYVLCSNILWKSFQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...GAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTTGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPWHLPQ*GANRSL
Trigger: GAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCA...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR GCA 90 bp GACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: DLATLCGTTGLHKMDTTRVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...ACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR CCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp CAAATGTTCACAATATCAATGCATTCTTGTTGGCATGCTAGACAGAGGCATTACCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 2 (lower is better)
Translates to: QMFTISMHSCWHARQRHYPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...GTAATGCCTCTGTCTAGCATGCCAACAAGAATGCATTGATATTGTGAACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR CCA 90 bp TGGTTAACTTTGGTGGCGGCCACAGTCAGATTGTGTAGATCCTGGGGATTACAAAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCG +
Preference number: 2 (lower is better)
Translates to: WLTLVAATVRLCRSWGLQRLCRS*GLQSVS
Trigger: CGAAACTGATTGTAATCCCCAGGATCTACACAATCT...TTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR GCA 90 bp GGGAGCATTTGTGGAGTTCTCGGCAATAAGGGAGATATAGGTGCCCAGAGTAAGGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: GSICGVLGNKGDIGAQSKVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...CTTACTCTGGGCACCTATATCTCCCTTATTGCCGAGAACTCCACAAATGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR GCA 90 bp AGTTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGGAAATGTCCGGGTaGATTAGGAATATTTTTGAT +
Preference number: 2 (lower is better)
Translates to: SFSIHGLPRHVAKHPNRPKEMSG*IRNIFD
Trigger: ATCAAAAATATTCCTAATGCACCCGGACATTTCCTT...TGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471410.5
3UTR-3UTR CCA 90 bp TCCCATGTTAGTCTCCATGAAACTAGTTACCAGATCATAACAACCCTTCTGGTTATGATGAGTTGCAGTTaGACCAAGTACAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: SHVSLHETSYQIITTLLVMMSCS*TKYRWR
Trigger: CCTCCATCTGTACTTGGTCCAACTGCAACTCATCAT...AACCAGAAGGGTTGTTATGATCTGGTAACTAGTTTCATGGAGACTAACATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR CCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTCCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 2 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR GCA 90 bp TTAACTTTGGTGGCGGCCACAGTCAGATTGTGTAGATCCTGGGGATTACAATCAGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LTLVAATVRLCRSWGLQSVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...TGATTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAAGCATGCCAATTAACTaGGAGAATGCGATTCCAAAC +
Preference number: 2 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKSMPIN*ENAIPN
Trigger: GTTTGGAATCGCATTCTCCCAGTTAATTGGCATGCT...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR TCA 90 bp TGCTGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCATGGACAATTATTaGAGTGTTTCGTTACATGTC +
Preference number: 2 (lower is better)
Translates to: CCSSFLKQVSYSVILERLLMDNY*SVSLHV
Trigger: GACATGTAACGAAACACTTCAATAATTGTCCATGAG...AAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR-3UTR CAA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR CCA 72 bp TGCCATGCTCCAGGAAGTAGGGGCTGGTGCTCCAGTTaGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: CHAPGSRGWCSS*CSSAHHSSSGC
Trigger: GCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTCCTGGAGCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR GCA 72 bp CACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATaGAGGGCCCAAAGGGGCCAGCGATGGTGTGATAAC +
Preference number: 3 (lower is better)
Translates to: HSEELTGASHTT*RAQRGQRWCDN
Trigger: GTTATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR CAA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAGATGATGAGTTGCAGTaGGACCAAGTACAGATGGAG +
Preference number: 3 (lower is better)
Translates to: QEPPTLHAGPKGASDGVIDDELQ*DQVQME
Trigger: CTCCATCTGTACTTGGTCCAACTGCAACTCATCATC...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR CAA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWAVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR CCA 72 bp TCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATaGTGTGATAACCAGTCACCGATGATGAGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: SHTTCRAQRGQR*CDNQSPMMSCS
Trigger: ACTGCAACTCATCATCGGTGACTGGTTATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR-3UTR CAA 90 bp CTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: LATLCGTTGLHKMDTTRDSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...GTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR CAA 90 bp GACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: DLATLCGTTGLHKMDTTRVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...ACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475216.5
3UTR-3UTR CAA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGCCCTTCTGGTTAACTTaGGTGGCGGCCACAGTCAGA +
Preference number: 3 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVPFWLT*VAATVR
Trigger: TCTGACTGTGGCCGCCACCAAAGTTAACCAGAAGGG...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR CCA 72 bp TGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATaGACACTACACGTGACGTGGGCTGAAAGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: WLHSVAQQGFTK*TLHVTWAERWS
Trigger: GCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
3UTR-3UTR CAA 90 bp TTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: FSIHGLPRHVAKHPNRPKVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...CTTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
3UTR-3UTR CAA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 3 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CAA 90 bp GGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: GEREQGKCIMYCALTFFGSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...TCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CAA 90 bp AGTTCCGATGAGCACATAGGGAGCATTTGTGGAGTTCTCGGCAATAAGGGAGATAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SSDEHIGSICGVLGNKGDSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...ATCTCCCTTATTGCCGAGAACTCCACAAATGCTCCCTATGTGCTCATCGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR TCA 72 bp GAAGGTGTCCTTGATCTCATGACGAAACACAAACCCTaGAATGCCAGCTACGAGCTCAGCCAGGAACACCAG +
Preference number: 3 (lower is better)
Translates to: EGVLDLMTKHKP*NASYELSQEHQ
Trigger: CTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
3UTR CCA 72 bp ACTTTGGTGGCGGCCACAGTCAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCGTTCATGCAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: TLVAATVRLCRS*GLQSVSFMQQL
Trigger: CAGCTGCTGCATGAACGAAACTGATTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR-3UTR CAA 90 bp AATGCGATTCCAAACGCCACTCCAGCGATGATTCCCATGTTAGTCTCCATGAAAGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 3 (lower is better)
Translates to: NAIPNATPAMIPMLVSMKAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...TTTCATGGAGACTAACATGGGAATCATCGCTGGAGTGGCGTTTGGAATCGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
3UTR TCA 72 bp GCTTATCTACTTAAAGGTGTGTGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTCCCACACTACATGCAG +
Preference number: 3 (lower is better)
Translates to: AYLLKGVWHLPQ*GANRSLPHYMQ
Trigger: CTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCACACACCTTTAAGTAGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
3UTR GCA 72 bp GGGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAGTCTTTCAAAGATTGC +
Preference number: 3 (lower is better)
Translates to: GGEGAGQVYYVL*SNILWKSFKDC
Trigger: GCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
3UTR GCA 72 bp TACAGGTTTCAACCGAGAGGCAAAGATGCACTAAACTaGCTACACATACCCAGGTATGTAACAAGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: YRFQPRGKDALN*LHIPRYVTSKE
Trigger: CTCCTTGCTTGTTACATACCTGGGTATGTGTAGGCAGTTTAGTGCATCTTTGCCTCTCGGTTGAAACCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR GCA 72 bp AACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATaGACTAAACTGCCTACACATACCCAGGTATGTAAC +
Preference number: 3 (lower is better)
Translates to: NRVIQVSTERQR*TKLPTHTQVCN
Trigger: GTTACATACCTGGGTATGTGTAGGCAGTTTAGTGCATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR GCA 72 bp CTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTaGTGCAGTTCCTTTTTAAAACAGGTCTCTTATTCC +
Preference number: 3 (lower is better)
Translates to: LCSNILWKSFKD*CSSFLKQVSYS
Trigger: GGAATAAGAGACCTGTTTTAAAAAGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATACAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVIQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp GAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EQRLGGSVSCTLWGKGERRLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...CCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: ANRSLPHYMQGPKGPAMVHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...CACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp CACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCTGCAGGGCCTCGGGGTaGGGTTCACTAGGACTAGCT +
Preference number: 4 (lower is better)
Translates to: HSEELTGASHTTCRAQRGCRASG*GSLGLA
Trigger: AGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCA...GCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp GCTGAAAGGTGGAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTATACAGATGGAGGGGCTaGCCCATGCAGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AERWSRDWVGVSVARCGVYRWRG*PMQGLG
Trigger: CCCGAGGCCCTGCATGGGCCAGCCCCTCCATCTGTA...TACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTCCACCTTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR GCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAGGTGGGAGTGTCAGTTaGACGTTGTGGGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVIGGSVS*TLWGKG
Trigger: CCCCTTACCCCACAACGTGCAACTGACACTCCCACC...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR GCA 90 bp GCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 4 (lower is better)
Translates to: ANRSLPHYMQGPKGPAMVFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...CACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp ACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: TGASHTTCRAQRGQRWCDSCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...ATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATAAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVINGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATATGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVIWHLPQ*GANRSL
Trigger: GAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCA...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR GCA 90 bp GCTCCAGGAAGTAGGGGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCCTGCACATGGTCCACTaGCCGGCTCCTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: APGSRGWCSSWCSSAHHSLHMVH*PAPLII
Trigger: AATGATGAGAGGAGCCGGGCAGTGGACCATGTGCAG...GCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CATCTCATACTGATTGGCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCATCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: HLILIGRDEPGQTAGQQHHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...ATGCTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGCCAATCAGTATGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGGCCTCCCACACTACATaGAGGGCCCAAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPGYTLWHNRASQNGHYTASHTT*RAQRGQ
Trigger: CTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGC...CGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp ACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TGASHTTCRAQRGQRWCDTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...ATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp CACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: HSEELTGASHTTCRAQRGPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...GCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp CATGACGAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCATACAGATGGAGGGGCTaGCCCATGCAGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: HDETQTLKCQLRAQPGTPYRWRG*PMQGLG
Trigger: CCCGAGGCCCTGCATGGGCCAGCCCCTCCATCTGTA...TGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTCGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR GCA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCACACAAACCCTGAAATaGCAGCTACGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSTQTLK*QLRAQP
Trigger: TGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTCAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 4 (lower is better)
Translates to: GWCSSWCSSAHHSSSGCAQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...AGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp CAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATAGGGAGCATTAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAKDNNSGASSDEHIGSIRLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...AATGCTCCCTATGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp GCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGGTGTCCTTGATCTCATaGCGAAACACAAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: ANRSLPHYMQGPKGPAMVVSLIS*RNTNPE
Trigger: TTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACAC...CACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp GGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GPGYTLWHNRASQNGHYTTRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...CGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp CTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACTGCAGGGCCTCGGGGTaGGGTTCACTAGGACTAGCT +
Preference number: 4 (lower is better)
Translates to: LATLCGTTGLHKMDTTRDCRASG*GSLGLA
Trigger: AGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCA...GTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp CATCTCATACTGATTGGCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCATAGACCTTCCCTGACTTaGAGAACCACCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: HLILIGRDEPGQTAGQQHRPSLT*RTTNAS
Trigger: GCTGGCGTTGGTGGTTCTTCAAGTCAGGGAAGGTCT...ATGCTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGCCAATCAGTATGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR GCA 90 bp AACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAGGTGGGAGTGTCAGTTaGACGTTGTGGGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: NTNPEMPATSSARNTRDRGGSVS*TLWGKG
Trigger: CCCCTTACCCCACAACGTGCAACTGACACTCCCACC...TCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp AACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGGGTGGGAGTGTCAGTTaGACGTTGTGGGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: NPEMPATSSARNTRDRNMGGSVS*TLWGKG
Trigger: CCCCTTACCCCACAACGTGCAACTGACACTCCCACC...CATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CATCTCATACTGATTGGCCGTGATGAACCGGGACAGACAGCAGGCCAGCAGCATTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 4 (lower is better)
Translates to: HLILIGRDEPGQTAGQQHFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...ATGCTGCTGGCCTGCTGTCTGTCCCGGTTCATCACGGCCAATCAGTATGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR TCA 90 bp CCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PGTPGTETWHTVSASMGYTRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...GTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp CCGGCTCCTCTCATCATTGCCATTGTAAGTCTGCATAGCGTCCGTGTAAGTCCTACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PAPLIIAIVSLHSVRVSPTRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...AGGACTTACACGGACGCTATGCAGACTTACAATGGCAATGATGAGAGGAGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTCTGCACATGGTCCACTaGCCGGCTCCTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWALHMVH*PAPLII
Trigger: AATGATGAGAGGAGCCGGGCAGTGGACCATGTGCAG...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCTGAAAGGTGGAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGCAGGCCAGCAGCATaGCAATTAACTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: AERWSRDWVGVSVARCGVSRPAA*QLTGRM
Trigger: CATTCTCCCAGTTAATTGGCATGCTGCTGGCCTGCT...TACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTCCACCTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATATCACCGATGATGAGTTaGAGTTGGACCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVISPMMS*SWTKYR
Trigger: TCTGTACTTGGTCCAACTGCAACTCATCATCGGTGA...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR GCA 90 bp GGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTTTCTTCCTTGACCATTaGAAACAGTCCGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GWCSSWCSSAHHSSSGCAFFLDH*KQSGLP
Trigger: TGGCAAACCGGACTGTTTGCAATGGTCAAGGAAGAA...AGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CCA 90 bp GGCTTCACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACGGCTGGTGCTCCAGTTaGTGTAGTTCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: GFTKWTLHVTWAERWSRDGWCSS*CSSAHH
Trigger: GTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC...GTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGGCTGGTGCTCCAGTTaGTGTAGTTCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: GTWLHSVAQQGFTKWTLHGWCSS*CSSAHH
Trigger: GTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC...GTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR CCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTCCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWAPGSRG*CSSWCS
Trigger: ACTACACCAACTGGAGCACCAGCCCCTACTTCCTGG...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGAGGTGGAGCAGAGACTaGGTGGGAGTGTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVRWSRD*VGVSVA
Trigger: TGCAACTGACACTCCCACCCAGTCTCTGCTCCACCT...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACCAAAGGGGCCAGCGATaGTGTGATAACCAGTCACCG +
Preference number: 4 (lower is better)
Translates to: GTWLHSVAQQGFTKWTLHQRGQR*CDNQSP
Trigger: CGGTGACTGGTTATCACACCATCGCTGGCCCCTTTG...GTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTCAAAGGGGCCAGCGATaGTGTGATAACCAGTCACCG +
Preference number: 4 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWAQRGQR*CDNQSP
Trigger: CGGTGACTGGTTATCACACCATCGCTGGCCCCTTTG...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGTGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp ACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAATGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: TQTLKCQLRAQPGTPGTEWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...TTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR GCA 90 bp GAGCAGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGTCTGCCACAAAATCCTaGAGCCTTTTCTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EQRLGGSVSCTLWGKGERSATKS*SLFFPE
Trigger: TTCTGGAAAGAAAAGGCTGCAGGATTTTGTGGCAGA...CCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286824.6
CDS-3UTR GCA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTACACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp ACAACACAGCTTTGTAACAGGGTTATACAGGTTTCAACCGAGAGGCAAAGATGCAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTQLCNRVIQVSTERQRCRLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...GCATCTTTGCCTCTCGGTTGAAACCTGTATAACCCTGTTACAAAGCTGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CCA 90 bp CATGACGAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCACCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: HDETQTLKCQLRAQPGTPPGSRG*CSSWCS
Trigger: ACTACACCAACTGGAGCACCAGCCCCTACTTCCTGG...TGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTCGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTGAGCATGCCAATTAACTaGGAGAATGCGATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AGAPVGVVLHTTAAQAALSMPIN*ENAIPN
Trigger: GTTTGGAATCGCATTCTCCCAGTTAATTGGCATGCT...CAGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp CATGACGAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAAGGTGGAGCAGAGACTaGGTGGGAGTGTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: HDETQTLKCQLRAQPGTPRWSRD*VGVSVA
Trigger: TGCAACTGACACTCCCACCCAGTCTCTGCTCCACCT...TGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp AACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: NPEMPATSSARNTRDRNMPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...CATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR CCA 90 bp GTGGCGGCCACAGTCAGATTGTGTAGATCCTGGGGATTACAATCAGTTTCGTTCAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: VAATVRLCRSWGLQSVSFSCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...GAACGAAACTGATTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR TCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGTACACCATCTCATACTaGTTGGCCGTGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVYTISY*LAVMNR
Trigger: CCGGTTCATCACGGCCAATCAGTATGAGATGGTGTA...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp CAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGTGTGATATTATTCCGTCATTCTTaGAAGACTTCTCCTTACACC +
Preference number: 4 (lower is better)
Translates to: QEPPTLHAGPKGASDGVILFRHS*KTSPYT
Trigger: GGTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAA...TATCACACCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR TCA 90 bp CCGGCTCCTCTCATCATTGCCATTGTAAGTCTGCATAGCGTCCGTGTAAGTCCTAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PAPLIIAIVSLHSVRVSPNGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...AGGACTTACACGGACGCTATGCAGACTTACAATGGCAATGATGAGAGGAGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp ACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACTCTCTGCTTCTTCCTTaGCCATTGCAAACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: TNPEMPATSSARNTRDRNSLLLP*PLQTVR
Trigger: CCGGACTGTTTGCAATGGTCAAGGAAGAAGCAGAGA...GTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR TCA 90 bp ATGCTCCAGGAAGTAGGGGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACATCTATAGACCTTCCCTaGCTTGAAGAACCACCAACG +
Preference number: 4 (lower is better)
Translates to: MLQEVGAGAPVGVVLHTTSIDLP*LEEPPT
Trigger: CGTTGGTGGTTCTTCAAGTCAGGGAAGGTCTATAGA...TGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTCCTGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR GCA 90 bp GGACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGACACAAACCCTGAAATaGCAGCTACGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPGYTLWHNRASQNGHYTTQTLK*QLRAQP
Trigger: TGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT...CGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR GCA 90 bp CCGGCTCCTCTCATCATTGCCATTGTAAGTCTGCATAGCGTCCGTGTAAGTCCTGGAAGTAGGGGCTGGTaGTCCAGTTGGTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAPLIIAIVSLHSVRVSPGSRGW*SSWCSS
Trigger: AGAACTACACCAACTGGAGCACCAGCCCCTACTTCC...AGGACTTACACGGACGCTATGCAGACTTACAATGGCAATGATGAGAGGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp AACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAGCAGGCCAGCAGCATaGCAATTAACTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: NTNPEMPATSSARNTRDRSRPAA*QLTGRM
Trigger: CATTCTCCCAGTTAATTGGCATGCTGCTGGCCTGCT...TCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp CATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGACAACGGCTGGTGCTCCAGTTaGTGTAGTTCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: HPWATTTCSKASKQAKDNGWCSS*CSSAHH
Trigger: GTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC...GTTGTCTTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp CACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: HSEELTGASHTTCRAQRGRLCRS*GLQSVS
Trigger: CGAAACTGATTGTAATCCCCAGGATCTACACAATCT...GCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp CTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LATLCGTTGLHKMDTTRDTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...GTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp GAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGCAGGATCACCCCAGTaGTCTGATTTTCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: ETQTLKCQLRAQPGTPGTAGSPQ*SDFPRQ
Trigger: TTGTCTTGGAAAATCAGATCACTGGGGTGATCCTGC...TGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS-3UTR TCA 90 bp AACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAGGTTTGCCATCTAGCTaGTTCTCGGTACCTCATACA +
Preference number: 4 (lower is better)
Translates to: NTNPEMPATSSARNTRDRGLPSS*FSVPHT
Trigger: TGTATGAGGTACCGAGAATCAGCTAGATGGCAAACC...TCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR GCA 90 bp CCGGCTCCTCTCATCATTGCCATTGTAAGTCTGCATAGCGTCCGTGTAAGTCCTGCAAACAGTCCGGTTTaGCATCTAGCTGATTCTCGG +
Preference number: 4 (lower is better)
Translates to: PAPLIIAIVSLHSVRVSPANSPV*HLADSR
Trigger: CCGAGAATCAGCTAGATGGCAAACCGGACTGTTTGC...AGGACTTACACGGACGCTATGCAGACTTACAATGGCAATGATGAGAGGAGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CCA 90 bp ACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAACCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TQTLKCQLRAQPGTPGTEPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...TTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CCA 90 bp GGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGACCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GEREQGKCIMYCALTFFGPGSRG*CSSWCS
Trigger: ACTACACCAACTGGAGCACCAGCCCCTACTTCCTGG...TCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TGGTTAACTTTGGTGGCGGCCACAGTCAGATTGTGTAGATCCTGGGGATTACAAAGGTGGAGCAGAGACTaGGTGGGAGTGTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: WLTLVAATVRLCRSWGLQRWSRD*VGVSVA
Trigger: TGCAACTGACACTCCCACCCAGTCTCTGCTCCACCT...TTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGTTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: DLATLCGTTGLHKMDTTRQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...ACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTATGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR TCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGGTGTCCTTGATCTCATaGCGAAACACAAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVVSLIS*RNTNPE
Trigger: TTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACAC...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp GAAACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGTGTCCTTGATCTCATaGCGAAACACAAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: ETQTLKCQLRAQPGTPGTVSLIS*RNTNPE
Trigger: TTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACAC...TGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR TCA 90 bp CCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRHVAKHPNRPKTTIVVPNGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...TGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTCAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAACAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGGCATACAGTTAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: CQLRAQPGTPGTETWHTVRLSQV*SPFSSM
Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...AACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CCA 90 bp AGTTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCACAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 4 (lower is better)
Translates to: SFSIHGLPRHVAKHPNRPQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...TGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CCA 90 bp GATAACCAGTCACCGATGATGAGTTGCAGTTGGACCAAGTACAGATGGAGGGGCCCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: DNQSPMMSCSWTKYRWRGPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...GCCCCTCCATCTGTACTTGGTCCAACTGCAACTCATCATCGGTGACTGGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp GCCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: ARNTRDRNMAYSFSIHGLPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...TAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTTACAGATGGAGGGGCTaGCCCATGCAGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPYRWRG*PMQGLG
Trigger: CCCGAGGCCCTGCATGGGCCAGCCCCTCCATCTGTA...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp AACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAATTTTGGATGGGAATaGATCCAGAAGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTNPEMPATSSARNTRDRNFGWE*IQKTKE
Trigger: CTCCTTCGTCTTCTGGATTCATTCCCATCCAAAATT...TCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS-3UTR TCA 90 bp TCAGCCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGTTGGCTGTGTCCTCGTaGATTTTGGATGGGAATGAA +
Preference number: 4 (lower is better)
Translates to: SARNTRDRNMAYSFSIHGLAVSS*ILDGNE
Trigger: TTCATTCCCATCCAAAATTCACGAGGACACAGCCAA...CCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS-3UTR GCA 90 bp GACAACAATAGTGGTGCCAGTTCCGATGAGCACATAGGGAGCATTTGTGGAGTTACACAAACCCTGAAATaGCAGCTACGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: DNNSGASSDEHIGSICGVTQTLK*QLRAQP
Trigger: TGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT...AACTCCACAAATGCTCCCTATGTGCTCATCGGAACTGGCACCACTATTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR GCA 90 bp CCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAAGCAGGCCAGCAGCATaGCAATTAACTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PRHVAKHPNRPKTTIVVPSRPAA*QLTGRM
Trigger: CATTCTCCCAGTTAATTGGCATGCTGCTGGCCTGCT...TGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp ACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGTCACCGATGATGAGTTaGAGTTGGACCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: TWLHSVAQQGFTKWTLHVSPMMS*SWTKYR
Trigger: TCTGTACTTGGTCCAACTGCAACTCATCATCGGTGA...CACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR GCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTGCCTCCCACACTACATaGAGGGCCCAAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPASHTT*RAQRGQ
Trigger: CTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGC...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp GGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATAGGCTGCGCTGCACATaGTCCACTGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GQVYYVLCSNILWKSFKDRLRCT*STARLL
Trigger: GAGGAGCCGGGCAGTGGACCATGTGCAGCGCAGCCT...ATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGCCAGCGATGGTGTGATAACCAGTCACCGATGATGAGTTGCAGTTGGACCAAGAGCATGCCAATTAACTaGGAGAATGCGATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GQRWCDNQSPMMSCSWTKSMPIN*ENAIPN
Trigger: GTTTGGAATCGCATTCTCCCAGTTAATTGGCATGCT...CTTGGTCCAACTGCAACTCATCATCGGTGACTGGTTATCACACCATCGCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp GGTTGTAGAAAAGCCATAGAACTTAGGTCTTCTGACCTCAAATCTTCGGTTCCAGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GCRKAIELRSSDLKSSVPVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...TGGAACCGAAGATTTGAGGTCAGAAGACCTAAGTTCTATGGCTTTTCTACAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR CCA 90 bp TGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CSKASKQAKDNNSGASSDTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...ATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GATAACCAGTCACCGATGATGAGTTGCAGTTGGACCAAGTACAGATGGAGGGGCATGATGAGTTGCAGTTaGACCAAGTACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: DNQSPMMSCSWTKYRWRGMMSCS*TKYRWR
Trigger: CCTCCATCTGTACTTGGTCCAACTGCAACTCATCAT...GCCCCTCCATCTGTACTTGGTCCAACTGCAACTCATCATCGGTGACTGGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTTCAATGCATTCTTGTTaGCATGCTAGACAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWASMHSC*HARQRH
Trigger: ATGCCTCTGTCTAGCATGCCAACAAGAATGCATTGA...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
3UTR CAA 72 bp CCCTTCTGGTTAACTTTGGTGGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTACAATCAGTTTCGTTC +
Preference number: 4 (lower is better)
Translates to: PFWLTLVAATVR*CRSWGLQSVSF
Trigger: GAACGAAACTGATTGTAATCCCCAGGATCTACACAATCTGACTGTGGCCGCCACCAAAGTTAACCAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp ACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAATTATTCCGTCATTCTTaGAAGACTTCTCCTTACACC +
Preference number: 4 (lower is better)
Translates to: TQTLKCQLRAQPGTPGTELFRHS*KTSPYT
Trigger: GGTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAA...TTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp AAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATAGGGAGCATTTGTGGAACACAAACCCTGAAATaGCAGCTACGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KDNNSGASSDEHIGSICGTQTLK*QLRAQP
Trigger: TGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGT...TCCACAAATGCTCCCTATGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR GCA 90 bp CAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCCAGCTCAGGCTGCGCTaGACATGGTCCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QVYYVLCSNILWKSFKDCQLRLR*TWSTAR
Trigger: CCGGGCAGTGGACCATGTGCAGCGCAGCCTGAGCTG...GCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAACACAGCAGCTCAGGCTaGGCTGCACATGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKHSSSG*AAHGPL
Trigger: CAGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp TTATTGAAGTGTTTCGTTACATGTCTTAGGCAGCCTGAAGAAGGTAGGAAAGCCTTCACTAGGACTAGCTaGAGGGGGACCTGGCTACAC +
Preference number: 4 (lower is better)
Translates to: LLKCFVTCLRQPEEGRKAFTRTS*RGTWLH
Trigger: GTGTAGCCAGGTCCCCCTGCAGCTAGTCCTAGTGAA...GGCTTTCCTACCTTCTTCAGGCTGCCTAAGACATGTAACGAAACACTTCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CCA 90 bp AATGCGATTCCAAACGCCACTCCAGCGATGATTCCCATGTTAGTCTCCATGAAACAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 4 (lower is better)
Translates to: NAIPNATPAMIPMLVSMKQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...TTTCATGGAGACTAACATGGGAATCATCGCTGGAGTGGCGTTTGGAATCGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp AAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACAGTGTCCTTGATCTCATaGCGAAACACAAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: KHPNRPKTTIVVPVPMSTVSLIS*RNTNPE
Trigger: TTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACAC...TGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR TCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAACACGTGACGTGGGCTaGAAGGTGGAGCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKTRDVG*KVEQRL
Trigger: CAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGT...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp CACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTGACGTGGGCTCTCATGGACAATTATTaGAGTGTTTCGTTACATGTC +
Preference number: 4 (lower is better)
Translates to: HSVAQQGFTKWTLHVTWALMDNY*SVSLHV
Trigger: GACATGTAACGAAACACTTCAATAATTGTCCATGAG...AGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR TCA 90 bp ATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAATCACCCCAGTGATCTaGTTTTCCAAGACAACATGC +
Preference number: 4 (lower is better)
Translates to: MAYSFSIHGLPRHVAKHPITPVI*FSKTTC
Trigger: GCATGTTGTCTTGGAAAATCAGATCACTGGGGTGAT...TGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS-3UTR CCA 90 bp GCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATAAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: ASKQAKDNNSGASSDEHIRLSQV*SPFSSM
Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...TATGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CCA 90 bp GGTTGTAGAAAAGCCATAGAACTTAGGTCTTCTGACCTCAAATCTTCGGTTCCAACACTACACGTGACGTaGGCTGAAAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCRKAIELRSSDLKSSVPTLHVT*AERWSR
Trigger: TCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGT...TGGAACCGAAGATTTGAGGTCAGAAGACCTAAGTTCTATGGCTTTTCTACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR CCA 90 bp GGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAATGATGAGTTGCAGTTaGACCAAGTACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GEREQGKCIMYCALTFFGMMSCS*TKYRWR
Trigger: CCTCCATCTGTACTTGGTCCAACTGCAACTCATCAT...TCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp ATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTTGCAGGGCCTCGGGGTaGGGTTCACTAGGACTAGCT +
Preference number: 4 (lower is better)
Translates to: IMYCALTFFGSLSKIAAVCRASG*GSLGLA
Trigger: AGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCA...AACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR GCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAACTGCACATGGTCCACTaGCCGGCTCCTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKLHMVH*PAPLII
Trigger: AATGATGAGAGGAGCCGGGCAGTGGACCATGTGCAG...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp ACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACTGGGTGGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TKWTLHVTWAERWSRDWVVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...CACCCAGTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp AACACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: NTNPEMPATSSARNTRDRVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...TCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATACCTCATACAGCACTGTaGTCCAGTTTCAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: ASKQAKDNNSGASSDEHIPHTAL*SSFKAK
Trigger: TTTTGCTTTGAAACTGGAGCACAGTGCTGTATGAGG...TATGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CCA 90 bp CAGCCTGAAGAAGGTAGGAAAGCCTTAGTAGAGGGAAAATCAAACCAAATGAGACAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 4 (lower is better)
Translates to: QPEEGRKALVEGKSNQMRQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...TCTCATTTGGTTTGATTTTCCCTCTACTAAGGCTTTCCTACCTTCTTCAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CCA 90 bp GTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTTTCCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: VLCSNILWKSFKDCCSSFPGSRG*CSSWCS
Trigger: ACTACACCAACTGGAGCACCAGCCCCTACTTCCTGG...AAAGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCAAAAGCATGCCAATTAACTaGGAGAATGCGATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FQHPWATTTCSKASKQAKSMPIN*ENAIPN
Trigger: GTTTGGAATCGCATTCTCCCAGTTAATTGGCATGCT...TTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TGCTGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CCSSFLKQVSYSVILERLVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...AAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATGTCAGTTGCACGTTGTaGGGTAAGGGGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQVYYVLCSNILWKSFKDVSCTL*GKGERE
Trigger: CTCCCTCTCCCCCTTACCCCACAACGTGCAACTGAC...ATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp ATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCATCAGCTCCCTTTTATTaGCTGTGTCCTCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: MAYSFSIHGLPRHVAKHPSAPFY*LCPREF
Trigger: AAATTCACGAGGACACAGCCAATAAAAGGGAGCTGA...TGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS-3UTR TCA 90 bp CAAATGTTCACAATATCAATGCATTCTTGTTGGCATGCTAGACAGAGGCATTACTGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QMFTISMHSCWHARQRHYWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...GTAATGCCTCTGTCTAGCATGCCAACAAGAATGCATTGATATTGTGAACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR TCA 90 bp AAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGAGCACATTATTCCGTCATTCTTaGAAGACTTCTCCTTACACC +
Preference number: 4 (lower is better)
Translates to: KHPNRPKTTIVVPVPMSTLFRHS*KTSPYT
Trigger: GGTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAA...TGTGCTCATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp GTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTTTAATGGACACTACACGTaGCGTGGGCTGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VLCSNILWKSFKDCCSSFNGHYT*RGLKGG
Trigger: TCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATT...AAAGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATCTGCACATGGTCCACTaGCCGGCTCCTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: GQVYYVLCSNILWKSFKDLHMVH*PAPLII
Trigger: AATGATGAGAGGAGCCGGGCAGTGGACCATGTGCAG...ATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTGGAAGTAGGGGCTGGTaGTCCAGTTGGTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPGSRGW*SSWCSS
Trigger: AGAACTACACCAACTGGAGCACCAGCCCCTACTTCC...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCGGCTGGTGCTCCAGTTaGTGTAGTTCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: VYYVLCSNILWKSFKDCCGWCSS*CSSAHH
Trigger: GTGGTGTGCAGAACTACACCAACTGGAGCACCAGCC...GCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVRLCRS*GLQSVS
Trigger: CGAAACTGATTGTAATCCCCAGGATCTACACAATCT...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TTTCAGCATCCATGGGCTACCACGACATGTAGCAAAGCATCCAAACAGGCCAAAAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: FQHPWATTTCSKASKQAKRLCRS*GLQSVS
Trigger: CGAAACTGATTGTAATCCCCAGGATCTACACAATCT...TTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TCCCATGTTAGTCTCCATGAAACTAGTTACCAGATCATAACAACCCTTCTGGTTCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: SHVSLHETSYQIITTLLVQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...AACCAGAAGGGTTGTTATGATCTGGTAACTAGTTTCATGGAGACTAACATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTAGCTGCAGGGGGACCTaGCTACACTCTGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: YYVLCSNILWKSFKDCCSSCRGT*LHSVAQ
Trigger: TTGTGCCACAGAGTGTAGCCAGGTCCCCCTGCAGCT...ACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTTACACCATCTCATACTaGTTGGCCGTGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPYTISY*LAVMNR
Trigger: CCGGTTCATCACGGCCAATCAGTATGAGATGGTGTA...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAAGCAGGCCAGCAGCATaGCAATTAACTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKSRPAA*QLTGRM
Trigger: CATTCTCCCAGTTAATTGGCATGCTGCTGGCCTGCT...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCACCGAGAGGCAAAGATaGACTAAACTGCCTACACAT +
Preference number: 4 (lower is better)
Translates to: GAGQVYYVLCSNILWKSFTERQR*TKLPTH
Trigger: ATGTGTAGGCAGTTTAGTGCATCTTTGCCTCTCGGT...GAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CCA 90 bp AACTATCGTCTGCTTATCTACTTAAAGGTGTGTGGCATTTACCACAGTGAGGAGAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: NYRLLIYLKVCGIYHSEERLSQV*SPFSSM
Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...CTCCTCACTGTGGTAAATGCCACACACCTTTAAGTAGATAAGCAGACGATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CCA 90 bp AAAAGAACAGATAACTATCGTCTGCTTATCTACTTAAAGGTGTGTGGCATTTACAGGTGGAGCAGAGACTaGGTGGGAGTGTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: KRTDNYRLLIYLKVCGIYRWSRD*VGVSVA
Trigger: TGCAACTGACACTCCCACCCAGTCTCTGCTCCACCT...GTAAATGCCACACACCTTTAAGTAGATAAGCAGACGATAGTTATCTGTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR TCA 90 bp TTCAAAGATTGCTGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTTGGTGCCAGTTCCGATaGGCACATAGGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: FKDCCSSFLKQVSYSVILWCQFR*AHREHL
Trigger: CAAATGCTCCCTATGTGCTCATCGGAACTGGCACCA...AAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCAGCAATCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp CAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGGCATTTACCACAGTaGGGAGCTAACAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QVYYVLCSNILWKSFKDCWHLPQ*GANRSL
Trigger: GAGGCTCCTGTTAGCTCCTCACTGTGGTAAATGCCA...GCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR GCA 90 bp TATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTGGAAGTAGGGGCTGGTaGTCCAGTTGGTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: YYVLCSNILWKSFKDCCSGSRGW*SSWCSS
Trigger: AGAACTACACCAACTGGAGCACCAGCCCCTACTTCC...ACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp TCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCTTACAGGAAGTAGGGGCTGGTaGTCCAGTTGGTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SFLKQVSYSVILERLLLTGSRGW*SSWCSS
Trigger: AGAACTACACCAACTGGAGCACCAGCCCCTACTTCC...TGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp CCACGACATGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRHVAKHPNRPKTTIVVPVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...TGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACATGTCGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCAGTTTCAGCATCCATaGGCTACCACGACATGTAGC +
Preference number: 4 (lower is better)
Translates to: CSSFLKQVSYSVILERLLQFQHP*ATTTCS
Trigger: GCTACATGTCGTGGTAGCCCATGGATGCTGAAACTG...GAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAACCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp CAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCCCTGGCTACACTCTGTaGCACAACAGGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QVYYVLCSNILWKSFKDCPGYTL*HNRASQ
Trigger: TTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGG...GCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR TCA 90 bp CAAATGTTCACAATATCAATGCATTCTTGTTGGCATGCTAGACAGAGGCATTACGTGTCCTTGATCTCATaGCGAAACACAAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: QMFTISMHSCWHARQRHYVSLIS*RNTNPE
Trigger: TTCAGGGTTTGTGTTTCGTCATGAGATCAAGGACAC...GTAATGCCTCTGTCTAGCATGCCAACAAGAATGCATTGATATTGTGAACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR TCA 90 bp ATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTTACACCATCTCATACTaGTTGGCCGTGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: IMYCALTFFGSLSKIAAVYTISY*LAVMNR
Trigger: CCGGTTCATCACGGCCAATCAGTATGAGATGGTGTA...AACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp TCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCTTACATACACCATCTCATACTaGTTGGCCGTGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: SFLKQVSYSVILERLLLTYTISY*LAVMNR
Trigger: CCGGTTCATCACGGCCAATCAGTATGAGATGGTGTA...TGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp ACATGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCAAGGAAATGTCCGGGTaGATTAGGAATATTTTTGAT +
Preference number: 4 (lower is better)
Translates to: TCSKASKQAKDNNSGASSKEMSG*IRNIFD
Trigger: ATCAAAAATATTCCTAATGCACCCGGACATTTCCTT...GGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CCA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPRLSQV*SPFSSM
Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATCCAGGGACAGAAACATaGCATACAGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GQVYYVLCSNILWKSFKDPGTET*HTVSAS
Trigger: GGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGG...ATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp ATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: IMYCALTFFGSLSKIAAVQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...AACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTCAGGGCTTCACAAAATaGACACTACACGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: YYVLCSNILWKSFKDCCSQGFTK*TLHVTW
Trigger: CCACGTCACGTGTAGTGTCCATTTTGTGAAGCCCTG...ACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAATGATGAGTTGCAGTTaGACCAAGTACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKMMSCS*TKYRWR
Trigger: CCTCCATCTGTACTTGGTCCAACTGCAACTCATCAT...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR CCA 90 bp GTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: VYYVLCSNILWKSFKDCCRLSQV*SPFSSM
Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...GCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR TCA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAATTATTCCGTCATTCTTaGAAGACTTCTCCTTACACC +
Preference number: 4 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKLFRHS*KTSPYT
Trigger: GGTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAA...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp TCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCTTACATCACCGATGATGAGTTaGAGTTGGACCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: SFLKQVSYSVILERLLLTSPMMS*SWTKYR
Trigger: TCTGTACTTGGTCCAACTGCAACTCATCATCGGTGA...TGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR GCA 90 bp GTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAAAGATGCACTAAACTaGCTACACATACCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VYYVLCSNILWKSFKDCCKDALN*LHIPRY
Trigger: ATACCTGGGTATGTGTAGGCAGTTTAGTGCATCTTT...GCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CCA 90 bp GGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATAGATTGTGTAGATCCTaGGGATTACAATCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: GQVYYVLCSNILWKSFKDRLCRS*GLQSVS
Trigger: CGAAACTGATTGTAATCCCCAGGATCTACACAATCT...ATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CCA 90 bp TATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTAGCATGCCAATTAACTaGGAGAATGCGATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: YYVLCSNILWKSFKDCCSSMPIN*ENAIPN
Trigger: GTTTGGAATCGCATTCTCCCAGTTAATTGGCATGCT...ACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp TGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCGTGTATTATGTACTGTaGTCTAACATTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CSSFLKQVSYSVILERLLVYYVL*SNILWK
Trigger: CTTCCAAAGAATGTTAGAGCACAGTACATAATACAC...GAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR GCA 90 bp GTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCTGTTCACAATATCAATaGATTCTTGTTGGCATGCTA +
Preference number: 4 (lower is better)
Translates to: VYYVLCSNILWKSFKDCCCSQYQ*ILVGML
Trigger: TAGCATGCCAACAAGAATGCATTGATATTGTGAACA...GCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CAA 90 bp GAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCCAGCGATGGGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: ELTGASHTTCRAQRGQRWVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...CCATCGCTGGCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CAA 90 bp CACAGTGAGGAGCTAACAGGAGCCTCCCACACTACATGCAGGGCCCAAAGGGGCAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HSEELTGASHTTCRAQRGSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...GCCCCTTTGGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CAA 90 bp GCTCCAGGAAGTAGGGGCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: APGSRGWCSSWCSSAHHSVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...GCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AGAGACTGGGTGGGAGTGTCAGTTGCACGTTGTGGGGTAAGGGGGAGAGGGAGCGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 5 (lower is better)
Translates to: RDWVGVSVARCGVRGRGSAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...GCTCCCTCTCCCCCTTACCCCACAACGTGCAACTGACACTCCCACCCAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACATGGCATACAGAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: NASYELSQEHQGQKHGIQSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...CTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp ACAAACCCTGAAATGCCAGCTACGAGCTCAGCCAGGAACACCAGGGACAGAAACGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 5 (lower is better)
Translates to: TNPEMPATSSARNTRDRNAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...GTTTCTGTCCCTGGTGTTCCTGGCTGAGCTCGTAGCTGGCATTTCAGGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp GGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: GEREQGKCIMYCALTFFGVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...TCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTAGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CAA 90 bp GCTGGTGCTCCAGTTGGTGTAGTTCTGCACACCACAGCAGCTCAGGCTGCGCTGCTTATTCCGTCATTCTaGAAAGACTTCTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: AGAPVGVVLHTTAAQAALLIPSF*KDFSLH
Trigger: GTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAG...CAGCGCAGCCTGAGCTGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp TGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATGTGCCCAGAGTAAGTTaGCCCCAGACTCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: CSKASKQAKDNNSGASSDVPRVS*PQTPTA
Trigger: GGCTGTTGGAGTCTGGGGCAAACTTACTCTGGGCAC...ATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CAA 90 bp AGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACCACGACATGTACCCTTCTGGTTAACTTaGGTGGCGGCCACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: RDRNMAYSFSIHGLPRHVPFWLT*VAATVR
Trigger: TCTGACTGTGGCCGCCACCAAAGTTAACCAGAAGGG...TACATGTCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp GACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: DLATLCGTTGLHKMDTTRQVITG*VSILLD
Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...ACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR CAA 90 bp GATAACCAGTCACCGATGATGAGTTGCAGTTGGACCAAGTACAGATGGAGGGGCCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: DNQSPMMSCSWTKYRWRGQVITG*VSILLD
Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...GCCCCTCCATCTGTACTTGGTCCAACTGCAACTCATCATCGGTGACTGGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CAA 90 bp CCAGGAACACCAGGGACAGAAACATGGCATACAGTTTCAGCATCCATGGGCTACGATGATGAGTTGCAGTaGGACCAAGTACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: PGTPGTETWHTVSASMGYDDELQ*DQVQME
Trigger: CTCCATCTGTACTTGGTCCAACTGCAACTCATCATC...GTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCCCTGGTGTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475216.5
CDS-3UTR CAA 90 bp GGGGAGAGGGAGCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAGTCACCGATGATGAGTaGCAGTTGGACCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: GEREQGKCIMYCALTFFGVTDDE*QLDQVQ
Trigger: CTGTACTTGGTCCAACTGCAACTCATCATCGGTGAC...TCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGCTCCCTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS TCA 90 bp TGCTTCTTCCTTGACCATTGCAAACAGTCCGGTTTGCCATCTAGCTaGTTCTCGGTACCTCATACAGCACTGTGCTCCAGTTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: CFFLDHCKQSGLPSS*FSVPHTALCSSFKA
Trigger: TGCTTTGAAACTGGAGCACAGTGCTGTATGAGGTACCGAGAATCAGCTAGATGGCAAACCGGACTGTTTGCAATGGTCAAGGAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CAA 90 bp GGCTTCACAAAATGGACACTACACGTGACGTGGGCTGAAAGGTGGAGCAGAGACCTTATTCCGTCATTCTaGAAAGACTTCTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: GFTKWTLHVTWAERWSRDLIPSF*KDFSLH
Trigger: GTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAG...GTCTCTGCTCCACCTTTCAGCCCACGTCACGTGTAGTGTCCATTTTGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AGTTCCGATGAGCACATAGGGAGCATTTGTGGAGTTCTCGGCAATAAGGGAGATATCTCTGCTTCTTCCTaGACCATTGCAAACAGTCCG +
Preference number: 5 (lower is better)
Translates to: SSDEHIGSICGVLGNKGDISASS*TIANSP
Trigger: CGGACTGTTTGCAATGGTCAAGGAAGAAGCAGAGAT...ATCTCCCTTATTGCCGAGAACTCCACAAATGCTCCCTATGTGCTCATCGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS-3UTR CAA 90 bp TGTAGCAAAGCATCCAAACAGGCCAAAGACAACAATAGTGGTGCCAGTTCCGATCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: CSKASKQAKDNNSGASSDQVITG*VSILLD
Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...ATCGGAACTGGCACCACTATTGTTGTCTTTGGCCTGTTTGGATGCTTTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471410.5
ENST00000475216.5
ENST00000480976.5
CDS-3UTR CAA 90 bp ATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCCTCCCTTCTGGTTAACTTaGGTGGCGGCCACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: MYCALTFFGSLSKIAAVPPFWLT*VAATVR
Trigger: TCTGACTGTGGCCGCCACCAAAGTTAACCAGAAGGG...AGGAACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AACTATCGTCTGCTTATCTACTTAAAGGTGTGTGGCATTTACCACAGTGAGGAGGTCACCGATGATGAGTaGCAGTTGGACCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: NYRLLIYLKVCGIYHSEEVTDDE*QLDQVQ
Trigger: CTGTACTTGGTCCAACTGCAACTCATCATCGGTGAC...CTCCTCACTGTGGTAAATGCCACACACCTTTAAGTAGATAAGCAGACGATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286824.6
ENST00000378482.7
CDS-3UTR CAA 90 bp GACCTGGCTACACTCTGTGGCACAACAGGGCTTCACAAAATGGACACTACACGTCCTCATGGACAATTATaGAAGTGTTTCGTTACATGT +
Preference number: 5 (lower is better)
Translates to: DLATLCGTTGLHKMDTTRPHGQL*KCFVTC
Trigger: ACATGTAACGAAACACTTCAATAATTGTCCATGAGG...ACGTGTAGTGTCCATTTTGTGAAGCCCTGTTGTGCCACAGAGTGTAGCCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CAA 90 bp GCAGGGCAAGTGTATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 5 (lower is better)
Translates to: AGQVYYVLCSNILWKSFKAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...TTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAATACACTTGCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp TGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCCCTTCTGGTTAACTTaGGTGGCGGCCACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: CSSFLKQVSYSVILERLLPFWLT*VAATVR
Trigger: TCTGACTGTGGCCGCCACCAAAGTTAACCAGAAGGG...GAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp TCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCTTACAAGTGTCAGTTGCACGTaGTGGGGTAAGGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SFLKQVSYSVILERLLLTSVSCT*WGKGER
Trigger: CCTCTCCCCCTTACCCCACAACGTGCAACTGACACT...TGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp GGACAATTATTGAAGTGTTTCGTTACATGTCTTAGGCAGCCTGAAGAAGGTAGGGATGATGAGTTGCAGTaGGACCAAGTACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: GQLLKCFVTCLRQPEEGRDDELQ*DQVQME
Trigger: CTCCATCTGTACTTGGTCCAACTGCAACTCATCATC...CCTACCTTCTTCAGGCTGCCTAAGACATGTAACGAAACACTTCAATAATTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378482.7
CDS-3UTR CAA 90 bp TCCCATGTTAGTCTCCATGAAACTAGTTACCAGATCATAACAACCCTTCTGGTTCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: SHVSLHETSYQIITTLLVQVITG*VSILLD
Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...AACCAGAAGGGTTGTTATGATCTGGTAACTAGTTTCATGGAGACTAACATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp TGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCGCGGCCACAGTCAGATaGTGTAGATCCTGGGGATTA +
Preference number: 5 (lower is better)
Translates to: CSSFLKQVSYSVILERLLAATVR*CRSWGL
Trigger: TAATCCCCAGGATCTACACAATCTGACTGTGGCCGC...GAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp AAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCCTTACACCATCTCATCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: KQVSYSVILERLLLTPSHQVITG*VSILLD
Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...ATGAGATGGTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS-3UTR CAA 90 bp TGCAGTTCCTTTTTAAAACAGGTCTCTTATTCCGTCATTCTTGAAAGACTTCTCGATGATGAGTTGCAGTaGGACCAAGTACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: CSSFLKQVSYSVILERLLDDELQ*DQVQME
Trigger: CTCCATCTGTACTTGGTCCAACTGCAACTCATCATC...GAGAAGTCTTTCAAGAATGACGGAATAAGAGACCTGTTTTAAAAAGGAACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR CAA 90 bp ATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTGTCACCGATGATGAGTaGCAGTTGGACCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: IMYCALTFFGSLSKIAAVVTDDE*QLDQVQ
Trigger: CTGTACTTGGTCCAACTGCAACTCATCATCGGTGAC...AACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000475216.5
CDS-3UTR CAA 90 bp TCCCATGTTAGTCTCCATGAAACTAGTTACCAGATCATAACAACCCTTCTGGTTCTTATTCCGTCATTCTaGAAAGACTTCTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: SHVSLHETSYQIITTLLVLIPSF*KDFSLH
Trigger: GTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAG...AACCAGAAGGGTTGTTATGATCTGGTAACTAGTTTCATGGAGACTAACATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471410.5
ENST00000475216.5
CDS GCA 90 bp ACAGCCAAAATAAGAAATTTAAGAGCAGCATTCCAAAAATCTGCTTaGAATGAGGAGGTAACTCAGATTGGAAGCTGCTGTAATGGAACT +
Preference number: 5 (lower is better)
Translates to: TAKIRNLRAAFQKSA*NEEVTQIGSCCNGT
Trigger: AGTTCCATTACAGCAGCTTCCAATCTGAGTTACCTCCTCATTGCAAGCAGATTTTTGGAATGCTGCTCTTAAATTTCTTATTTTGGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488893.5
CDS-3UTR CAA 90 bp ATTATGTACTGTGCTCTAACATTCTTTGGAAGTCTTTCAAAGATTGCTGCAGTTCTTATTCCGTCATTCTaGAAAGACTTCTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: IMYCALTFFGSLSKIAAVLIPSF*KDFSLH
Trigger: GTGTAAGGAGAAGTCTTTCAAGAATGACGGAATAAG...AACTGCAGCAATCTTTGAAAGACTTCCAAAGAATGTTAGAGCACAGTACATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286824.6
ENST00000378482.7
ENST00000471410.5
ENST00000475216.5
CDS TCA 72 bp CTTGACCATTGCAAACAGTCCGGTTTGCCATCTAGCTaGTTCTCGGTACCTCATACAGCACTGTGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LDHCKQSGLPSS*FSVPHTALCSS
Trigger: ACTGGAGCACAGTGCTGTATGAGGTACCGAGAATCAGCTAGATGGCAAACCGGACTGTTTGCAATGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS GCA 72 bp TCTGCTTCTTCCTTGACCATTGCAAACAGTCCGGTTTaGCATCTAGCTGATTCTCGGTACCTCATACAGCAC +
Preference number: 6 (lower is better)
Translates to: SASSLTIANSPV*HLADSRYLIQH
Trigger: GTGCTGTATGAGGTACCGAGAATCAGCTAGATGGCAAACCGGACTGTTTGCAATGGTCAAGGAAGAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471410.5
CDS GCA 72 bp CAAGAGAGGGGCACACTGAGAACTTTCATCACAAGATaGCTGCTGCCGTTAAACCTGAAAACAATGATGGGG +
Preference number: 6 (lower is better)
Translates to: QERGTLRTFITR*LLPLNLKTMMG
Trigger: CCCCATCATTGTTTTCAGGTTTAACGGCAGCAGGCATCTTGTGATGAAAGTTCTCAGTGTGCCCCTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494037.1
CDS GCA 72 bp CAAAGCCATAGCCACATCCTGTCTGCCACAAAATCCTaGAGCCTTTTCTTTCCAGAAGACGAAGGAGTAGAT +
Preference number: 6 (lower is better)
Translates to: QSHSHILSATKS*SLFFPEDEGVD
Trigger: ATCTACTCCTTCGTCTTCTGGAAAGAAAAGGCTGCAGGATTTTGTGGCAGACAGGATGTGGCTATGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286824.6
CDS TCA 72 bp TTCAAATTCAGCTCCCTTTTATTGGCTGTGTCCTCGTaGATTTTGGATGGGAATGAATCCAGAAGACGAAGG +
Preference number: 6 (lower is better)
Translates to: FKFSSLLLAVSS*ILDGNESRRRR
Trigger: CCTTCGTCTTCTGGATTCATTCCCATCCAAAATTCACGAGGACACAGCCAATAAAAGGGAGCTGAATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS CCA 72 bp GTGACGAGCTCTTCTTCAAATTCAGCTCCCTTTTATTaGCTGTGTCCTCGTGAATTTTGGATGGGAATGAAT +
Preference number: 6 (lower is better)
Translates to: VTSSSSNSAPFY*LCPREFWMGMN
Trigger: ATTCATTCCCATCCAAAATTCACGAGGACACAGCCAATAAAAGGGAGCTGAATTTGAAGAAGAGCTCGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480976.5
CDS GCA 72 bp TCTCCCTTGTACCCTTTCTCACAAAGTTACTGGAAGTaGTCCACTAAAACCAGCAAGCAAAACAGAAGATAT +
Preference number: 6 (lower is better)
Translates to: SPLYPFSQSYWK*STKTSKQNRRY
Trigger: ATATCTTCTGTTTTGCTTGCTGGTTTTAGTGGAGCACTTCCAGTAACTTTGTGAGAAAGGGTACAAGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494037.1