Pregenerated sensors for TSPAN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000134198Ensembl transcript IDs: ENST00000369515.6, ENST00000369516.7, ENST00000433172.3, ENST00000491992.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAATTATTTTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTaGGAGACAGCTCCTGTGACATTTGGTATGAAAGCTTTAGATTGC | + |
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Preference number: 1 (lower is better) Translates to: QIILDPNVISVLKMS*ETAPVTFGMKALDC Trigger: GCAATCTAAAGCTTTCATACCAAATGTCACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAAAATAATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGGTGTTAAAAATGAGCTaGGAGACAGCTCCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: TQETLTPNLDTVSFNTPLVLKMS*ETAPVT Trigger: TGTCACAGGAGCTGTCTCCCAGCTCATTTTTAACAC...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR TCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGTCAATGGCTACAGTCTaGGAAACTGACCCATTATCA | + |
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Preference number: 2 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWSMATV*ETDPLS Trigger: TGATAATGGGTCAGTTTCTCAGACTGTAGCCATTGA...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGAAACATACGTACTCATaGAAATGTACAATTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWKHTYS*KCTIDS Trigger: GCTGTCAATTGTACATTTGCATGAGTACGTATGTTT...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATAGCTCCTGTGACATTTaGTATGAAAGCTTTAGATTG | + |
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Preference number: 2 (lower is better) Translates to: IQCLGMRHLKACLGLISNSSCDI*YESFRL Trigger: CAATCTAAAGCTTTCATACCAAATGTCACAGGAGCT...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR CCA 72 bp | GATGATTCTGAGTTGGAAAGAACCCGAGTATGCACTTaGGCCTGTTTCCTGTCTTCAGGCAGAGAGATAAAC | + |
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Preference number: 3 (lower is better) Translates to: DDSELERTRVCT*ACFLSSGREIN Trigger: GTTTATCTCTCTGCCTGAAGACAGGAAACAGGCCCAAGTGCATACTCGGGTTCTTTCCAACTCAGAATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATAACCCGAGTATGCACTaGGGCCTGTTTCCTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: IQCLGMRHLKACLGLISNNPSMH*GLFPVF Trigger: GAAGACAGGAAACAGGCCCAAGTGCATACTCGGGTT...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATAGAGATGATTCTGAGTaGGAAAGAACCCGAGTATGC | + |
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Preference number: 3 (lower is better) Translates to: IQCLGMRHLKACLGLISNRDDSE*ERTRVC Trigger: GCATACTCGGGTTCTTTCCAACTCAGAATCATCTCT...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATTGCACACTCAAAGACTaGTGTTTTCACATGTATAGA | + |
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Preference number: 3 (lower is better) Translates to: IQCLGMRHLKACLGLISNCTLKD*CFHMYR Trigger: TCTATACATGTGAAAACACAAGTCTTTGAGTGTGCA...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| 3UTR TCA 72 bp | CCCAACTTAGACACAGTCAGTTTTAACACTCCATTGTaGTCTCTCAATTCTTACAGCTTATTACTTCCATTA | + |
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Preference number: 3 (lower is better) Translates to: PNLDTVSFNTPL*SLNSYSLLLPL Trigger: TAATGGAAGTAATAAGCTGTAAGAATTGAGAGATCACAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCAAGCAGCAGGTACTTaGTGCACCGCAGGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVQAAGT*CTAGPR Trigger: GCGGGGGCCTGCGGTGCATCAAGTACCTGCTGCTTG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGGATCCAAGCACACATTaGGACTCCCGCATGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLDPSTH*DSRMAP Trigger: CGGAGCCATGCGGGAGTCGCAATGTGTGCTTGGATC...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATCAAGCAGCAGGTACTTaGTGCACCGCAGGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNQAAGT*CTAGPR Trigger: GCGGGGGCCTGCGGTGCATCAAGTACCTGCTGCTTG...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGATTGCGACTCCCGCATaGCTCCGCAGCACCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVIATPA*LRSTRR Trigger: TCTTCGGGTGCTGCGGAGCCATGCGGGAGTCGCAAT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR GCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGGATCCAAGCACACATTaGGACTCCCGCATGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVDPSTH*DSRMAP Trigger: CGGAGCCATGCGGGAGTCGCAATGTGTGCTTGGATC...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGATAGTCCAAAAGCAATaGCGGCCGATCCAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVIVQKQ*RPIQPA Trigger: GGCTGGCTGGATCGGCCGTCATTGCTTTTGGACTAT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGTCATATCACATCTCGTaGGTTTCGTATCGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLSYHIS*VSYRTA Trigger: TGCTGTGCGATACGAAACTCACGAGATGTGATATGA...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGATGATAACTCCTTTATaGCACCTCCGAACCGAAACC | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLMITPL*HLRTET Trigger: GGTTTCGGTTCGGAGGTGCCATAAAGGAGTTATCAT...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGTCAATGGCTACAGTCTaGGAAACTGACCCATTATCA | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLSMATV*ETDPLS Trigger: TGATAATGGGTCAGTTTCTCAGACTGTAGCCATTGA...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTTTGGGCATGTAGGTTaGACCTGTTCGGAGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVFGHVG*TCSELS Trigger: AGAAAGCTCCGAACAGGTCCAACCTACATGCCCAAA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGACAGCACTGAAATGTTaGGTGGAAGGTGATGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVTALKC*VEGDEC Trigger: ACACTCATCACCTTCCACTCAACATTTCAGTGCTGT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTCTTTTCCACAGCACTaGAATGTTGAGTGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVSFPQH*NVEWKV Trigger: CACCTTCCACTCAACATTTCAGTGCTGTGGAAAAGA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTCATATCACATCTCGTaGGTTTCGTATCGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVSYHIS*VSYRTA Trigger: TGCTGTGCGATACGAAACTCACGAGATGTGATATGA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCACGCAGATCACACATaGATATGCTCTCAGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVHADHT*ICSQSS Trigger: TGATGACTGAGAGCATATTCATGTGTGATCTGCGTG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGATGATAACTCCTTTATaGCACCTCCGAACCGAAACC | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVMITPL*HLRTET Trigger: GGTTTCGGTTCGGAGGTGCCATAAAGGAGTTATCAT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGGTGTTAAAAATGAGCTaGGAGACAGCTCCTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVVLKMS*ETAPVT Trigger: TGTCACAGGAGCTGTCTCCCAGCTCATTTTTAACAC...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGCACATTAATCGTACATaGAACAGAACCCTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLHINRT*NRTLLF Trigger: GAAGAGAAGGGTTCTGTTCCATGTACGATTAATGTG...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGTCTTTTCCACAGCACTaGAATGTTGAGTGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWSFPQH*NVEWKV Trigger: CACCTTCCACTCAACATTTCAGTGCTGTGGAAAAGA...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGTACAGTCTGAGAAACTaGCCCATTATCACTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLYSLRN*PIITFS Trigger: AGAAAAAGTGATAATGGGTCAGTTTCTCAGACTGTA...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGAAGCAAATACTCCAGTaGTTACTTCAGCAGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: TQETLTPNLDTVSFNTPLKQILQ*LLQQQI Trigger: TATTTGCTGCTGAAGTAACCACTGGAGTATTTGCTT...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATACAGCACTGAAATGTTaGGTGGAAGGTGATGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNTALKC*VEGDEC Trigger: ACACTCATCACCTTCCACTCAACATTTCAGTGCTGT...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGAAAGATCGTCAGACCTaGAATTCCAATACCGACAAT | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVKDRQT*NSNTDN Trigger: ATTGTCGGTATTGGAATTGCAGGTCTGACGATCTTT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCCCACAATTTTCAACTaGCAGATCTCTTGCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVPTIFN*QISCFS Trigger: ACTAAAGCAAGAGATCTGGCAGTTGAAAATTGTGGG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGGGACTGCCTGTTCTTTaGCTAAAAGGTCACATTTCT | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWGLPVL*LKGHIS Trigger: AGAAATGTGACCTTTTAGGCAAAGAACAGGCAGTCC...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATGCAGAAAGAGAAATGTaGTTCTCCATGGGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNAEREM*FSMGER Trigger: TCTCTCTCCCATGGAGAACCACATTTCTCTTTCTGC...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGACAATTCCAATGAGCTaGAGCTTAACACTGATTATG | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVTIPMS*SLTLIM Trigger: CATAATCAGTGTTAAGCTCCAGCTCATTGGAATTGT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGAGCTCCTGTGACATTTaGTATGAAAGCTTTAGATTG | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVSSCDI*YESFRL Trigger: CAATCTAAAGCTTTCATACCAAATGTCACAGGAGCT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGAAGCAAATACTCCAGTaGTTACTTCAGCAGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVKQILQ*LLQQQI Trigger: TATTTGCTGCTGAAGTAACCACTGGAGTATTTGCTT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGAAATGTGGTTCTCCATaGGAGAGAGACTATTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWKCGSP*ERDYFK Trigger: CTTGAAATAGTCTCTCTCCCATGGAGAACCACATTT...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGAGAAACAGAAGAGTTTaGCATAAAAGTCCCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWRNRRV*HKSPFE Trigger: CTCAAAGGGACTTTTATGTCAAACTCTTCTGTTTCT...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTCTCAATTTCATCGATaGAATTCTTGTGTCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVSQFHR*NSCVLE Trigger: TTCTAGGACACAAGAATTGCATCGATGAAATTGAGA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGAAACATACGTACTCATaGAAATGTACAATTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVKHTYS*KCTIDS Trigger: GCTGTCAATTGTACATTTGCATGAGTACGTATGTTT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGAGCTCCTGTGACATTTaGTATGAAAGCTTTAGATTG | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWSSCDI*YESFRL Trigger: CAATCTAAAGCTTTCATACCAAATGTCACAGGAGCT...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTGGTTTACTGTATTCTaGGGAGAGCATGTATATAAA | + |
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Preference number: 4 (lower is better) Translates to: LDPNVISVLKMSWETAPVWFTVF*GEHVYK Trigger: TTTATATACATGCTCTCCCCAGAATACAGTAAACCA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGCTTAATTCAGTGCCTTaGCATGAGACATTTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWLNSVP*HETFKS Trigger: GCTTTTAAATGTCTCATGCCAAGGCACTGAATTAAG...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR TCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATTTTAACACTCCATTGTaGTCTCTCAATTCTTACAGC | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNFNTPL*SLNSYS Trigger: GCTGTAAGAATTGAGAGATCACAATGGAGTGTTAAA...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGTCTCAATTTCATCGATaGAATTCTTGTGTCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWSQFHR*NSCVLE Trigger: TTCTAGGACACAAGAATTGCATCGATGAAATTGAGA...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR GCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATGAAGTCTTAATTCAGTaGCTTGGCATGAGACATTTA | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNEVLIQ*LGMRHL Trigger: TAAATGTCTCATGCCAAGGCACTGAATTAAGACTTC...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CCA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATCTCATACGCATATTTTaGAAAGCTTATCTCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IQCLGMRHLKACLGLISNLIRIF*KAYLQK Trigger: CTTTTGGAGATAAGCTTTCCAAAATATGCGTATGAG...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGCCAAGCAGCAGGTACTaGATGCACCGCAGGCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: TQETLTPNLDTVSFNTPLPSSRY*MHRRPP Trigger: CGGGGGCCTGCGGTGCATCAAGTACCTGCTGCTTGG...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCCAAGCAGCAGGTACTaGATGCACCGCAGGCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVPSSRY*MHRRPP Trigger: CGGGGGCCTGCGGTGCATCAAGTACCTGCTGCTTGG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGAACCCGAGTATGCACTaGGGCCTGTTTCCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TQETLTPNLDTVSFNTPLNPSMH*GLFPVF Trigger: GAAGACAGGAAACAGGCCCAAGTGCATACTCGGGTT...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCTTTGGGCATGTAGGTaGGACCTGTTCGGAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVLWACR*DLFGAF Trigger: GAAAGCTCCGAACAGGTCCAACCTACATGCCCAAAG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAAACCCTTACACCCAACTTAGACACAGTCAGTTTTAACACTCCATTGTGGACTGCCTGTTCTTaGCCTAAAAGGTCACATTTC | + |
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Preference number: 5 (lower is better) Translates to: TQETLTPNLDTVSFNTPLWTACS*PKRSHF Trigger: GAAATGTGACCTTTTAGGCAAAGAACAGGCAGTCCA...CAATGGAGTGTTAAAACTGACTGTGTCTAAGTTGGGTGTAAGGGTTTCCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGAAATACTCTGGGGACTaGTCCTCTGATGATAACTCC | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVKYSGD*SSDDNS Trigger: GGAGTTATCATCAGAGGACAAGTCCCCAGAGTATTT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGCGGATAGCTACCCCCTaGCCTATAAAAGCAAATACT | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVRIATP*PIKANT Trigger: AGTATTTGCTTTTATAGGCAAGGGGGTAGCTATCCG...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000369516.7 ENST00000433172.3 |
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| CDS TCA 90 bp | TTAGATTGCAATTTTCATGTAGAAGTAGCTTCATATCACATCTCGTaGGTTTCGTATCGCACAGCAGAGGACCATGCTGAATATCATGCC | + |
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Preference number: 5 (lower is better) Translates to: LDCNFHVEVASYHIS*VSYRTAEDHAEYHA Trigger: GGCATGATATTCAGCATGGTCCTCTGCTGTGCGATACGAAACTCACGAGATGTGATATGAAGCTACTTCTACATGAAAATTGCAATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 ENST00000491992.1 |
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| CDS CCA 90 bp | AAGATCGTCAGACCTGCAATTCCAATACCGACAATTCCAATGAGCTaGAGCTTAACACTGATTATGGTCTCAATTTCATCGATGCAATTC | + |
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Preference number: 5 (lower is better) Translates to: KIVRPAIPIPTIPMS*SLTLIMVSISSMQF Trigger: GAATTGCATCGATGAAATTGAGACCATAATCAGTGTTAAGCTCCAGCTCATTGGAATTGTCGGTATTGGAATTGCAGGTCTGACGATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000491992.1 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTCATCGATGCAATTCTaGTGTCCTAGAAGCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVSSMQF*CPRSSF Trigger: AAAGGAGCTTCTAGGACACAAGAATTGCATCGATGA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369515.6 ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGCGGATAGCTACCCCCTaGCCTATAAAAGCAAATACT | + |
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Preference number: 5 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWRIATP*PIKANT Trigger: AGTATTTGCTTTTATAGGCAAGGGGGTAGCTATCCG...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGATCATGCCAAAGATCTaGTGTCCTAGAAGCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVIMPKI*CPRSSF Trigger: AAAGGAGCTTCTAGGACACAAGATCTTTGGCATGAT...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433172.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATAAATACTCTGGGGACTaGTCCTCTGATGATAACTCC | + |
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Preference number: 5 (lower is better) Translates to: IQCLGMRHLKACLGLISNKYSGD*SSDDNS Trigger: GGAGTTATCATCAGAGGACAAGTCCCCAGAGTATTT...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGTCATCGATGCAATTCTaGTGTCCTAGAAGCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWSSMQF*CPRSSF Trigger: AAAGGAGCTTCTAGGACACAAGAATTGCATCGATGA...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ACTTGTTTCTGTTGCCCACACACAACTAGGAGAAGATGCTTTTCTTTATTTTGGTTTTGTTTCCTTAACTaGTTTCTGTTGCCCACACAC | + |
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Preference number: 5 (lower is better) Translates to: TCFCCPHTTRRRCFSLFWFCFLN*FLLPTH Trigger: GTGTGTGGGCAACAGAAACAAGTTAAGGAAACAAAA...CCAAAATAAAGAAAAGCATCTTCTCCTAGTTGTGTGTGGGCAACAGAAACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTAATGTCATTTCAGTGTTAAAAATGAGCTGGGAGACAGCTCCTGTGTGCACACTCAAAGACTaGTGTTTTCACATGTATAGA | + |
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Preference number: 5 (lower is better) Translates to: LDPNVISVLKMSWETAPVCTLKD*CFHMYR Trigger: TCTATACATGTGAAAACACAAGTCTTTGAGTGTGCA...CACAGGAGCTGTCTCCCAGCTCATTTTTAACACTGAAATGACATTAGGATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS-3UTR CAA 90 bp | ATTCAGTGCCTTGGCATGAGACATTTAAAAGCATGTTTGGGTCTAATCTCAAATTGGGAGCGAAATAGGTaGTTCTTCTTATATAACAAG | + |
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Preference number: 5 (lower is better) Translates to: IQCLGMRHLKACLGLISNWERNR*FFLYNK Trigger: CTTGTTATATAAGAAGAACAACCTATTTCGCTCCCA...ATTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369516.7 |
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| CDS TCA 72 bp | ACTCTGGCCTGGCCCATCTCCTCTGTAAGCCTTCTGTaGTTAACTGCATGTAGCTCTGAGCACTCCACGGAC | + |
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Preference number: 6 (lower is better) Translates to: TLAWPISSVSLL*LTACSSEHSTD Trigger: GTCCGTGGAGTGCTCAGAGCTACATGCAGTTAATCACAGAAGGCTTACAGAGGAGATGGGCCAGGCCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491992.1 |
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| CDS CCA 72 bp | ACTCTGGGGACTTGTCCTCTGATGATAACTCCTTTATaGCACCTCCGAACCGAAACCATAGTCCAAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TLGTCPLMITPL*HLRTETIVQKQ Trigger: TTGCTTTTGGACTATGGTTTCGGTTCGGAGGTGCCATAAAGGAGTTATCATCAGAGGACAAGTCCCCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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| CDS TCA 72 bp | AATTTTCATGTAGAAGTAGCTTCATATCACATCTCGTaGGTTTCGTATCGCACAGCAGAGGACCATGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: NFHVEVASYHIS*VSYRTAEDHAE Trigger: TTCAGCATGGTCCTCTGCTGTGCGATACGAAACTCACGAGATGTGATATGAAGCTACTTCTACATGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 ENST00000491992.1 |
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| CDS CCA 72 bp | AGACCTGCAATTCCAATACCGACAATTCCAATGAGCTaGAGCTTAACACTGATTATGGTCTCAATTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: RPAIPIPTIPMS*SLTLIMVSISS Trigger: CGATGAAATTGAGACCATAATCAGTGTTAAGCTCCAGCTCATTGGAATTGTCGGTATTGGAATTGCAGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000491992.1 |
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| CDS CAA 90 bp | GAGCTGGGAGACAGCTCCTGTGACATTTGGTATGAAAGCTTTAGATaGCAATTTTCATGTAGAAGTAGCTTCATATCACATCTCGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ELGDSSCDIWYESFR*QFSCRSSFISHLVS Trigger: ACTCACGAGATGTGATATGAAGCTACTTCTACATGAAAATTGCAATCTAAAGCTTTCATACCAAATGTCACAGGAGCTGTCTCCCAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369515.6 ENST00000369516.7 ENST00000433172.3 |
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