RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN19 (Homo sapiens)

Ensembl gene IDs: ENSG00000231738

Ensembl transcript IDs: ENST00000433494.8, ENST00000529820.1, ENST00000532628.5, ENST00000552392.5

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCATGCCATAGTTGCTaGACCTCCTCTTTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: AFRIVHLVISSGLSLDPYSCHSC*TSSFFV
Trigger: CACAAAGAAAGAGGAGGTTCAGCAACTATGGCATGA...GTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
3UTR CAA 90 bp TGTTGGCCACAACATGTTTTCTGTAAGGCATTCAGAATAGTCCACTaGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: CWPQHVFCKAFRIVH*VISSGLSLDPYSEM
Trigger: CATTTCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTTACAGAAAACATGTTGTGGCCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433494.8
3UTR TCA 72 bp TTGCTGAACCTCCTCTTTCTTTGTGATGATGAATGCTaGAAGTACAACCTGAACAGCAAAGGTCCATGTTAT +
Preference number: 3 (lower is better)
Translates to: LLNLLFLCDDEC*KYNLNSKGPCY
Trigger: ATAACATGGACCTTTGCTGTTCAGGTTGTACTTTCAGCATTCATCATCACAAAGAAAGAGGAGGTTCAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS-3UTR TCA 90 bp AAGGCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATCCTCATCCAGTCCCTaGAATGCTGCGTTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: KAFRIVHLVISSGLSLDPSSSSP*NAAFVS
Trigger: TGAAACGAACGCAGCATTTCAGGGACTGGATGAGGA...TGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS-3UTR TCA 90 bp CAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGATCATGCCATAGTTGCTaGACCTCCTCTTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QNSPLGYIFRLIFRSILRSCHSC*TSSFFV
Trigger: CACAAAGAAAGAGGAGGTTCAGCAACTATGGCATGA...TCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS-3UTR TCA 90 bp GTTTTCTGTAAGGCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTGTGATGATGAATGCTaGAAGTACAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: VFCKAFRIVHLVISSGLSCDDEC*KYNLNS
Trigger: GCTGTTCAGGTTGTACTTTCAGCATTCATCATCACA...AGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTTACAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS-3UTR TCA 90 bp GTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGAAATGACATGTGATGATGAATGCTaGAAGTACAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: VHLVISSGLSLDPYSEMTCDDEC*KYNLNS
Trigger: GCTGTTCAGGTTGTACTTTCAGCATTCATCATCACA...TGTCATTTCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS-3UTR TCA 90 bp AGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGAAATGACATGCACCAAATCCCATaGATAAAAGTCCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: SPLGYIFRLIFRSILRNDMHQIP*IKVQEP
Trigger: TGGTTCTTGGACTTTTATTCATGGGATTTGGTGCAT...GTCATTTCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS-3UTR TCA 90 bp AAGGCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCAATGCACCAAATCCCATaGATAAAAGTCCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: KAFRIVHLVISSGLSLDPMHQIP*IKVQEP
Trigger: TGGTTCTTGGACTTTTATTCATGGGATTTGGTGCAT...TGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS-3UTR GCA 90 bp GCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACATCCAGTCCCTGAAATaGTGCGTTCGTTTCAATTTA +
Preference number: 4 (lower is better)
Translates to: AFRIVHLVISSGLSLDPYIQSLK*CVRFNL
Trigger: TAAATTGAAACGAACGCAGCATTTCAGGGACTGGAT...GTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS-3UTR GCA 90 bp GTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGAAATGACATTAAAGTTGACTTTGTaGAAGAACATGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: VHLVISSGLSLDPYSEMTLKLTL*KNMAPV
Trigger: GACAGGTGCCATGTTCTTGCACAAAGTCAACTTTAA...TGTCATTTCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS-3UTR TCA 90 bp GTTTTCTGTAAGGCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTACATGGCACCTGTCCTaGATTTTCTTTGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: VFCKAFRIVHLVISSGLSTWHLS*IFFVLI
Trigger: AATAAGAACAAAGAAAATTCAGGACAGGTGCCATGT...AGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTTACAGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS GCA 90 bp ACCTGTAAATCGCAGTTGCTCCAGACAACCCTTTACTCTTGCTTCTaGTACACTTACTTGAACACCACATTCATCATTGCTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: TCKSQLLQTTLYSCF*YTYLNTTFIIAGVH
Trigger: GTGGACCCCAGCAATGATGAATGTGGTGTTCAAGTAAGTGTAGCAGAAGCAAGAGTAAAGGGTTGTCTGGAGCAACTGCGATTTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CCA 90 bp TTGACAGAAGTGCCTCCTCTTTCTGCAGGACTTCTCAAGGAAGGCTaGGGAGAAAGACTGATGATATCCCAAGTTCCAAGAATACATAAA +
Preference number: 5 (lower is better)
Translates to: LTEVPPLSAGLLKEG*GERLMISQVPRIHK
Trigger: TTTATGTATTCTTGGAACTTGGGATATCATCAGTCTTTCTCCCCAGCCTTCCTTGAGAAGTCCTGCAGAAAGAGGAGGCACTTCTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 90 bp AGTAGTTTCCCTACTTACCCACCAGCAATACCCCCAGTGGAGGCCTaGAAACACAGACAGTATCAAACCCTAAATATATTACATGTCTTC +
Preference number: 5 (lower is better)
Translates to: SSFPTYPPAIPPVEA*KHRQYQTLNILHVF
Trigger: GAAGACATGTAATATATTTAGGGTTTGATACTGTCTGTGTTTTCAGGCCTCCACTGGGGGTATTGCTGGTGGGTAAGTAGGGAAACTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CCA 90 bp CTCTTGCTTCTGCTACACTTACTTGAACACCACATTCATCATTGCTaGGGTCCACTCCCTTTAGTTTTTGCCTATTCTTTTACTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LLLLLHLLEHHIHHC*GPLPLVFAYSFTPG
Trigger: ACCAGGAGTAAAAGAATAGGCAAAAACTAAAGGGAGTGGACCCCAGCAATGATGAATGTGGTGTTCAAGTAAGTGTAGCAGAAGCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 90 bp TGTGATACCTCAACAGTCGATCTTACAATGAAGATGACTACTAAGTaGCTAAGGGTGGGTAGCATCTGCATCATGAATACACTGGACAAA +
Preference number: 5 (lower is better)
Translates to: CDTSTVDLTMKMTTK*LRVGSICIMNTLDK
Trigger: TTTGTCCAGTGTATTCATGATGCAGATGCTACCCACCCTTAGTCACTTAGTAGTCATCTTCATTGTAAGATCGACTGTTGAGGTATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 90 bp ACAACTCTTGGATGTAAAGAGCCTCAAAGTCCTGGCTCTATTATATaGACTTATCTGATTAGGTCTCCACCTGATTGCTCTGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: TTLGCKEPQSPGSII*TYLIRSPPDCSAVY
Trigger: ATAGACTGCAGAGCAATCAGGTGGAGACCTAATCAGATAAGTTCATATAATAGAGCCAGGACTTTGAGGCTCTTTACATCCAAGAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS-3UTR CAA 90 bp CAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATACTCAGATTCTTAAAGTTGACTTaGTGCAAGAACATGGCACCT +
Preference number: 5 (lower is better)
Translates to: QNSPLGYIFRLIFRSILRFLKLT*CKNMAP
Trigger: AGGTGCCATGTTCTTGCACAAAGTCAACTTTAAGAA...TCTGAGTATGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433494.8
CDS CCA 90 bp AGATTAGTAATTTACCAAAGTCTAAATAGTAAGTCAATATCTAATTaGCGAACTGGACTTTTAGTCCAGAAAGCTTTCTACGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RLVIYQSLNSKSISN*RTGLLVQKAFYGSR
Trigger: CCTGCTGCCGTAGAAAGCTTTCTGGACTAAAAGTCCAGTTCGCCAATTAGATATTGACTTACTATTTAGACTTTGGTAAATTACTAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529820.1
ENST00000532628.5
CDS-3UTR CAA 90 bp AAGGCATTCAGAATAGTCCACTTGGTTATATCTTCAGGCTTATCTTTAGATCCATTCAGAATAGTCCACTaGGTTATATCTTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: KAFRIVHLVISSGLSLDPFRIVH*VISSGL
Trigger: TAAGCCTGAAGATATAACCAAGTGGACTATTCTGAA...TGGATCTAAAGATAAGCCTGAAGATATAACCAAGTGGACTATTCTGAATGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433494.8
ENST00000552392.5
CDS CAA 90 bp ACTCCTGGTGTTTTAGCTCCCTTTCCAATCTTATGCACCAAGGCTTaGACAGAAGTGCCTCCTCTTTCTGCAGGACTTCTCAAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: TPGVLAPFPILCTKA*TEVPPLSAGLLKEG
Trigger: GCCTTCCTTGAGAAGTCCTGCAGAAAGAGGAGGCACTTCTGTCAAAGCCTTGGTGCATAAGATTGGAAAGGGAGCTAAAACACCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CAA 72 bp GTTTTAGCTCCCTTTCCAATCTTATGCACCAAGGCTTaGACAGAAGTGCCTCCTCTTTCTGCAGGACTTCTC +
Preference number: 6 (lower is better)
Translates to: VLAPFPILCTKA*TEVPPLSAGLL
Trigger: GAGAAGTCCTGCAGAAAGAGGAGGCACTTCTGTCAAAGCCTTGGTGCATAAGATTGGAAAGGGAGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 72 bp CCTACTTACCCACCAGCAATACCCCCAGTGGAGGCCTaGAAACACAGACAGTATCAAACCCTAAATATATTA +
Preference number: 6 (lower is better)
Translates to: PTYPPAIPPVEA*KHRQYQTLNIL
Trigger: TAATATATTTAGGGTTTGATACTGTCTGTGTTTTCAGGCCTCCACTGGGGGTATTGCTGGTGGGTAAGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS GCA 72 bp TCGCAGTTGCTCCAGACAACCCTTTACTCTTGCTTCTaGTACACTTACTTGAACACCACATTCATCATTGCT +
Preference number: 6 (lower is better)
Translates to: SQLLQTTLYSCF*YTYLNTTFIIA
Trigger: AGCAATGATGAATGTGGTGTTCAAGTAAGTGTAGCAGAAGCAAGAGTAAAGGGTTGTCTGGAGCAACTGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS GCA 72 bp TCAGAAGTCTGGCAACTTGCAGACTGCCCAACATGGTaGTCTTACTGCCAATATATGAACATATACACACAC +
Preference number: 6 (lower is better)
Translates to: SEVWQLADCPTW*SYCQYMNIYTH
Trigger: GTGTGTGTATATGTTCATATATTGGCAGTAAGAGCACCATGTTGGGCAGTCTGCAAGTTGCCAGACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 72 bp AGCCTCAAAGTCCTGGCTCTATTATATGAACTTATCTaGTTAGGTCTCCACCTGATTGCTCTGCAGTCTATT +
Preference number: 6 (lower is better)
Translates to: SLKVLALLYELI*LGLHLIALQSI
Trigger: AATAGACTGCAGAGCAATCAGGTGGAGACCTAATCAGATAAGTTCATATAATAGAGCCAGGACTTTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 72 bp GGATGTAAAGAGCCTCAAAGTCCTGGCTCTATTATATaGACTTATCTGATTAGGTCTCCACCTGATTGCTCT +
Preference number: 6 (lower is better)
Translates to: GCKEPQSPGSII*TYLIRSPPDCS
Trigger: AGAGCAATCAGGTGGAGACCTAATCAGATAAGTTCATATAATAGAGCCAGGACTTTGAGGCTCTTTACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CCA 72 bp CTGCTACACTTACTTGAACACCACATTCATCATTGCTaGGGTCCACTCCCTTTAGTTTTTGCCTATTCTTTT +
Preference number: 6 (lower is better)
Translates to: LLHLLEHHIHHC*GPLPLVFAYSF
Trigger: AAAAGAATAGGCAAAAACTAAAGGGAGTGGACCCCAGCAATGATGAATGTGGTGTTCAAGTAAGTGTAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CCA 72 bp ATTTCAGAAGTCTGGCAACTTGCAGACTGCCCAACATaGTGCTCTTACTGCCAATATATGAACATATACACA +
Preference number: 6 (lower is better)
Translates to: ISEVWQLADCPT*CSYCQYMNIYT
Trigger: TGTGTATATGTTCATATATTGGCAGTAAGAGCACCATGTTGGGCAGTCTGCAAGTTGCCAGACTTCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS TCA 72 bp TCAACAGTCGATCTTACAATGAAGATGACTACTAAGTaGCTAAGGGTGGGTAGCATCTGCATCATGAATACA +
Preference number: 6 (lower is better)
Translates to: STVDLTMKMTTK*LRVGSICIMNT
Trigger: TGTATTCATGATGCAGATGCTACCCACCCTTAGTCACTTAGTAGTCATCTTCATTGTAAGATCGACTGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CAA 90 bp CTTAATTCTGCAGTTGACACCTTTAGGTCATGGAATGTGTCTATTTaGCATCTCATTGTATATTCAACATCTAGTACAGTACATGACACA +
Preference number: 6 (lower is better)
Translates to: LNSAVDTFRSWNVSI*HLIVYSTSSTVHDT
Trigger: TGTGTCATGTACTGTACTAGATGTTGAATATACAATGAGATGCAAAATAGACACATTCCATGACCTAAAGGTGTCAACTGCAGAATTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS GCA 72 bp CAGTTGACACCTTTAGGTCATGGAATGTGTCTATTTTaGATCTCATTGTATATTCAACATCTAGTACAGTAC +
Preference number: 6 (lower is better)
Translates to: QLTPLGHGMCLF*ISLYIQHLVQY
Trigger: GTACTGTACTAGATGTTGAATATACAATGAGATGCAAAATAGACACATTCCATGACCTAAAGGTGTCAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CAA 72 bp GCAGTTGACACCTTTAGGTCATGGAATGTGTCTATTTaGCATCTCATTGTATATTCAACATCTAGTACAGTA +
Preference number: 6 (lower is better)
Translates to: AVDTFRSWNVSI*HLIVYSTSSTV
Trigger: TACTGTACTAGATGTTGAATATACAATGAGATGCAAAATAGACACATTCCATGACCTAAAGGTGTCAACTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5
CDS CCA 72 bp TACAATTTACCTAATTACGTGTTCAACTTAGGGAAGTaGATTAAGAATGTAGCCACCGTCAACAACATTATT +
Preference number: 6 (lower is better)
Translates to: YNLPNYVFNLGK*IKNVATVNNII
Trigger: AATAATGTTGTTGACGGTGGCTACATTCTTAATCCACTTCCCTAAGTTGAACACGTAATTAGGTAAATTGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532628.5