RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN18 (Homo sapiens)

Ensembl gene IDs: ENSG00000157570

Ensembl transcript IDs: ENST00000340160.7, ENST00000517621.5, ENST00000518429.2, ENST00000519051.5, ENST00000520245.5, ENST00000520278.1, ENST00000520358.7, ENST00000520837.5, ENST00000520999.6, ENST00000521990.1, ENST00000533080.5, ENST00000533202.5, ENST00000533786.5

Found 514 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCTGGGCCTGGTGTTCCTTTGGTCTCTAGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTCTGGAGAACCCACGGCACCTGCCCT +
Preference number: 1 (lower is better)
Translates to: ALGLVFLWSLEQPAS*ASCWGLWRTHGTCP
Trigger: AGGGCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp AGAGCAGGGAGGAGGCAGTTCCTGGCTGACTTGCCCTCTCTTGTCTaGGGGAACCGGGATGCTGAGGCCAGGGGTGCATGTGGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: RAGRRQFLADLPSLV*GNRDAEARGACGQQ
Trigger: CTGCTGCCCACATGCACCCCTGGCCTCAGCATCCCGGTTCCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACTGCCTCCTCCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp CAGGGTCTGGCTGGACCAAAGAGGGCGCTGGGCCTGGTGTTCCTTTaGTCTCTAGAGCAGCCTGCATCCTGGGCCAGTTGCTGGGGTCTC +
Preference number: 1 (lower is better)
Translates to: QGLAGPKRALGLVFL*SLEQPASWASCWGL
Trigger: GAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTCCAGCCAGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp GGGAACCGGGATGCTGAGGCCAGGGGTGCATGTGGGCAGCAGAGCTaGCAGAGTCCTGGATGCAGTGACAGCAGCCTGGAGACAACTCAG +
Preference number: 1 (lower is better)
Translates to: GNRDAEARGACGQQS*QSPGCSDSSLETTQ
Trigger: CTGAGTTGTCTCCAGGCTGCTGTCACTGCATCCAGGACTCTGTCAGCTCTGCTGCCCACATGCACCCCTGGCCTCAGCATCCCGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp AAAGAGGGCGCTGGGCCTGGTGTTCCTTTGGTCTCTAGAGCAGCCTaGATCCTGGGCCAGTTGCTGGGGTCTCTGGAGAACCCACGGCAC +
Preference number: 1 (lower is better)
Translates to: KEGAGPGVPLVSRAA*ILGQLLGSLENPRH
Trigger: GTGCCGTGGGTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGCGCCCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp AGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGC +
Preference number: 1 (lower is better)
Translates to: RRVHLNLCSRHRASG*ISEGGRRTGQGTRG
Trigger: GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR CCA 90 bp TGTGATGTGCACCTCTGTGTGTTCCTGGGGACTCAGAGAGAGGTGTaGGGAGGTAGGAGCGAGGGCGCGGTGGGAAGTCATGGAATGGTG +
Preference number: 1 (lower is better)
Translates to: CDVHLCVFLGTQREV*GGRSEGAVGSHGMV
Trigger: CACCATTCCATGACTTCCCACCGCGCCCTCGCTCCTACCTCCCCACACCTCTCTCTGAGTCCCCAGGAACACACAGAGGTGCACATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp CCCCCACAACCCCAGCCACCACCAGAACCTGCTGTGGGTTGTATCTaGACCAAGCCAGCTAAACCCTGTTTCTCCCTGTGCTCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: PPQPQPPPEPAVGCI*TKPAKPCFSLCSGG
Trigger: CCCTCCAGAGCACAGGGAGAAACAGGGTTTAGCTGGCTTGGTCCAGATACAACCCACAGCAGGTTCTGGTGGTGGCTGGGGTTGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp GTCCTCCCTCTGACTTCTGTGGGCCCCAGAAGCCTGGGATGCCCCTaGATTAGAGCCATAAAGCTGTGCAATTTGCCTCAGTCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: VLPLTSVGPRSLGCP*IRAIKLCNLPQSCP
Trigger: TGGGCAGGACTGAGGCAAATTGCACAGCTTTATGGCTCTAATCCAGGGGCATCCCAGGCTTCTGGGGCCCACAGAAGTCAGAGGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp TGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTaGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGGCACATTTG +
Preference number: 1 (lower is better)
Translates to: CLSSLSSLRGWPVAG*RAESGLIEGSLAHL
Trigger: CAAATGTGCCAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp AGCCTGAGGGGAGGCTGGAAGCTGATACAGGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTCTTCCTGAAGAGGGACAGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: SLRGGWKLIQDAGGL*DRMSSFFLKRDRGE
Trigger: CTCCCCTCTGTCCCTCTTCAGGAAGAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTCCAGCCTCCCCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp AAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTaGATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAG +
Preference number: 1 (lower is better)
Translates to: KDWRAQQEEIRGGST*IFAAGTELLAASQK
Trigger: CTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR GCA 90 bp GCATCCTGGGCCAGTTGCTGGGGTCTCTGGAGAACCCACGGCACCTaGCCTGAGTCCAGGCGAGGATACATCAGTCCATATTTTTGTCTT +
Preference number: 1 (lower is better)
Translates to: ASWASCWGLWRTHGT*PESRRGYISPYFCL
Trigger: AAGACAAAAATATGGACTGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp CCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAAGACATGGCAGCTaGATCTCCGTGCAGCCCCTGGGCTTTGATGACTTCTCTGAGATT +
Preference number: 1 (lower is better)
Translates to: PGIALWVPSPQRHGS*ISVQPLGFDDFSEI
Trigger: AATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTCGGAACCCACAGCGCAATCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp CAGGGGTGCATGTGGGCAGCAGAGCTGACAGAGTCCTGGATGCAGTaGCAGCAGCCTGGAGACAACTCAGCTTCTTTTCAGAACTGTCAC +
Preference number: 1 (lower is better)
Translates to: QGCMWAAELTESWMQ*QQPGDNSASFQNCH
Trigger: GTGACAGTTCTGAAAAGAAGCTGAGTTGTCTCCAGGCTGCTGTCACTGCATCCAGGACTCTGTCAGCTCTGCTGCCCACATGCACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp TGTTTCTCCCTGTGCTCTGGAGGGAGGCTCAAGCCTGATTTGGGCTaGGCTTTCTTTGCCTTGCCTCCAAGGAATGGCCTCAGGCAGTCT +
Preference number: 1 (lower is better)
Translates to: CFSLCSGGRLKPDLG*AFFALPPRNGLRQS
Trigger: AGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCTCCAGAGCACAGGGAGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp CTGGGCCAGTTGCTGGGGTCTCTGGAGAACCCACGGCACCTGCCCTaGGTCCAGGCGAGGATACATCAGTCCATATTTTTGTCTTCATTT +
Preference number: 1 (lower is better)
Translates to: LGQLLGSLENPRHLP*VQARIHQSIFLSSF
Trigger: AAATGAAGACAAAAATATGGACTGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACTGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp CGCTGTGGGTTCCGAGTCCTCAAAGACATGGCAGCTGAATCTCCGTaGAGCCCCTGGGCTTTGATGACTTCTCTGAGATTTGCTTTTGCC +
Preference number: 1 (lower is better)
Translates to: RCGFRVLKDMAAESP*SPWALMTSLRFAFA
Trigger: GGCAAAAGCAAATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTCGGAACCCACAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp GCAGCCTGGAGACAACTCAGCTTCTTTTCAGAACTGTCACGCCTGTaGTGTGTGTCTGTGGATGGTCACTGTCCTCTCTGGGCCTTTGAG +
Preference number: 1 (lower is better)
Translates to: AAWRQLSFFSELSRL*CVSVDGHCPLWAFE
Trigger: CTCAAAGGCCCAGAGAGGACAGTGACCATCCACAGACACACAGCACAGGCGTGACAGTTCTGAAAAGAAGCTGAGTTGTCTCCAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp CTGGAGGGAGGCTCAAGCCTGATTTGGGCTGAGCTTTCTTTGCCTTaGCTCCAAGGAATGGCCTCAGGCAGTCTTGCAAATAGCTACCAG +
Preference number: 1 (lower is better)
Translates to: LEGGSSLIWAELSLP*LQGMASGSLANSYQ
Trigger: CTGGTAGCTATTTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp AGATTATTTGGTCCAACAGATGGGGAAAGCAAGGATCCTACCAGCTaGGCCATTCTTGGATGCCGTGTTAGCAGCTCACTCTTGGCCCCG +
Preference number: 1 (lower is better)
Translates to: RLFGPTDGESKDPTS*AILGCRVSSSLLAP
Trigger: CGGGGCCAAGAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAATAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp GGTCACTGTCCTCTCTGGGCCTTTGAGATTATTTGGTCCAACAGATaGGGAAAGCAAGGATCCTACCAGCTGGGCCATTCTTGGATGCCG +
Preference number: 1 (lower is better)
Translates to: GHCPLWAFEIIWSNR*GKQGSYQLGHSWMP
Trigger: CGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAATAATCTCAAAGGCCCAGAGAGGACAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp GCTCAGGGGAGTCAATGTGTGACCTCAACACTCCAGGAAGGAGAGTaGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAAC +
Preference number: 1 (lower is better)
Translates to: AQGSQCVTSTLQEGE*ASGMPWTEPQKNRN
Trigger: GTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACATTGACTCCCCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp GATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTaGCCTGTTAGTGGGGTCCGAGGAAGTCTCTGTTATGGGCTGTTG +
Preference number: 1 (lower is better)
Translates to: DTGRVCDERCSLLVP*PVSGVRGSLCYGLL
Trigger: CAACAGCCCATAACAGAGACTTCCTCGGACCCCACTAACAGGGCAAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp CCTGTGCTGTGTGTCTGTGGATGGTCACTGTCCTCTCTGGGCCTTTaGGATTATTTGGTCCAACAGATGGGGAAAGCAAGGATCCTACCA +
Preference number: 1 (lower is better)
Translates to: PVLCVCGWSLSSLGL*DYLVQQMGKARILP
Trigger: TGGTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAATAATCTCAAAGGCCCAGAGAGGACAGTGACCATCCACAGACACACAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 90 bp GCATCTTGCAATCCAGTTGCCAACACTCGTCTAGAGTTTGAGAACTaGATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCCT +
Preference number: 1 (lower is better)
Translates to: ASCNPVANTRLEFEN*ILVGVHLRVSLPKP
Trigger: AGGCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACTCTAGACGAGTGTTGGCAACTGGATTGCAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTaGCCAAGCCTGGAGGGAATACTAAGAAATGTGCGGACAGTGAAG +
Preference number: 1 (lower is better)
Translates to: SLRTEYLWVCICESP*PSLEGILRNVRTVK
Trigger: CTTCACTGTCCGCACATTTCTTAGTATTCCCTCCAGGCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 90 bp GTGACCTCAACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATaGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGTATTAAGC +
Preference number: 1 (lower is better)
Translates to: VTSTLQEGEWASGMP*TEPQKNRNLFCVLS
Trigger: GCTTAATACACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCCGGGGCTCTAGGCTGTaGCTCCGAGTGTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASRGSRL*LRVSLV
Trigger: CACCAGGGACACTCGGAGCCACAGCCTAGAGCCCCG...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCGGCCAGGGGTGCATGTaGGCAGCAGAGCTGACAGAG +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASGQGCM*AAELTE
Trigger: CTCTGTCAGCTCTGCTGCCCACATGCACCCCTGGCC...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp CCAGGGTCTGGCTGGACCAAAGAGGGCGCTGGGCCTGGTGTTCCTTaGGTCTCTAGAGCAGCCTGCATCCTGGGCCAGTTGCTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: PGSGWTKEGAGPGVP*VSRAACILGQLLGS
Trigger: AGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTCCAGCCAGACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCCAGTGGACCAGGGATTaGGCTGTGGGTTCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASQWTRD*AVGSES
Trigger: GGACTCGGAACCCACAGCGCAATCCCTGGTCCACTG...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLEQPAS*ASCWGL
Trigger: GAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTC...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGAGCTCAGAGACCTGGTaGGAGGGCAAGGACTGGCGG +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLSSETW*EGKDWR
Trigger: CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCT...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCTGGGCCCCAGAAGCCTaGGATGCCCCTGGATTAGAG +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASWAPEA*DAPGLE
Trigger: CTCTAATCCAGGGGCATCCCAGGCTTCTGGGGCCCA...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGTTGTGGGTGTGCATCTaGGAGTCTCCCTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLLWVCI*ESPCPS
Trigger: GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAA...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGTCCAAGCCTCAGTTCTaGGTGTGGAGAGGGAGACCC +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLSKPQF*VWRGRP
Trigger: GGGTCTCCCTCTCCACACCCAGAACTGAGGCTTGGA...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp GGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTaGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GGHSRRRLEEGPPES*QQAQSFWLHLRRGQ
Trigger: CTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR-3UTR GCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCTGGGCCATTCTTGGATaGCGTGTTAGCAGCTCACTC +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASWAILG*RVSSSL
Trigger: GAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCA...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGAGTGGGCAAGTGGGATaGCATGGACAGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLSGQVG*HGQSHR
Trigger: TCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACT...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGCACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLHRASG*ISEGGR
Trigger: TCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTG...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp TGTGTGACCTCAACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATGGACAGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: CVTSTLQEGEWASGMPWTEQPAS*ASCWGL
Trigger: GAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTC...TGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCGGCCCAGGGTCTGGCTaGACCAAAGAGGGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: SLRTEYLWVCICESPCPSGPGSG*TKEGAG
Trigger: CCCAGCGCCCTCTTTGGTCCAGCCAGACCCTGGGCC...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCGCAGTGACAGCAGCCTaGAGACAACTCAGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASAVTAA*RQLSFF
Trigger: AAAGAAGCTGAGTTGTCTCCAGGCTGCTGTCACTGC...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAACTTGGCATCAGGTCCTaGTGCAGTGAGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQLGIRS*CSEERG
Trigger: CCCTCTCTCCTCACTGCACCAGGACCTGATGCCAAG...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR TCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGGAAATGTGCGGACAGTaGAGAGACAGGAAACCTTGT +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLEMCGQ*RDRKPC
Trigger: ACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTC...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR TCA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTGGGGAGGCTGGAAGCTaGTACAGGATGCCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VPWHICRKLLRGSLVSALGEAGS*YRMPVA
Trigger: AGCCACCGGCATCCTGTATCAGCTTCCAGCCTCCCC...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGAGAACCCACGGCACCTaGCCTGAGTCCAGGCGAGGA +
Preference number: 2 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVRTHGT*PESRRG
Trigger: TCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCT...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGGACAGGAAACCTTGTTaGAGCAGAAATGGCCTCGAT +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLDRKPC*SRNGLD
Trigger: ATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTC...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATTGTGGGTGTGCATCTaGGAGTCTCCCTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLLWVCI*ESPCPS
Trigger: GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAA...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGAAGCTGATACAGGATaGCGGTGGCTTGTGAGACAG +
Preference number: 2 (lower is better)
Translates to: FAAGTELLAASQKGADAQEADTG*RWLVRQ
Trigger: CTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTC...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTCTGGGCAGTGGTGGGTaGGGCGAGTCTTCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: VPWHICRKLLRGSLVSALLGSGG*GESSGF
Trigger: GAAGCCTGAAGACTCGCCCCACCCACCACTGCCCAG...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCCTCATCTTCTCCCCTaGGGCCAAGAGGACAGCGGG +
Preference number: 2 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSPHLLP*GQEDSG
Trigger: CCCGCTGTCCTCTTGGCCCCAGGGGAGAAGATGAGG...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GTAGGAGCGAGGGCGCGGTGGGAAGTCATGGAATGGTGTTTTCTTAGCTGTAGAAGTTGCTGGGGTCTCTaGAGAACCCACGGCACCTGC +
Preference number: 2 (lower is better)
Translates to: VGARARWEVMEWCFLSCRSCWGL*RTHGTC
Trigger: GCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACT...TCTACAGCTAAGAAAACACCATTCCATGACTTCCCACCGCGCCCTCGCTCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGACCAAAGAGGGCGCTaGGCCTGGTGTTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: ASGSLANSYQPERMPTGADQRGR*AWCSFG
Trigger: ACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTC...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGAAGGATCCTACCAGCTaGGCCATTCTTGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: FAAGTELLAASQKGADAQKDPTS*AILGCR
Trigger: ACGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTT...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGAGGTATGCAAGAGGGTaGAGAAGTCTTGGCAAGGAT +
Preference number: 2 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLRYARG*RSLGKD
Trigger: ATCCTTGCCAAGACTTCTCCACCCTCTTGCATACCT...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTACAGGCACAGAGCTTCTaGCTGCATCTCAGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLQAQSF*LHLRRG
Trigger: CCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTG...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR-3UTR GCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCAGTGGACCAGGGATTaGGCTGTGGGTTCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSQWTRD*AVGSES
Trigger: GGACTCGGAACCCACAGCGCAATCCCTGGTCCACTG...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTAAGTTCCTGGCTGACTTaGCCTCTCTTGTCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLSSWLT*PLLSGG
Trigger: TCCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACT...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCGCCTTTGAGATTATTTaGTCCAACAGATGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LPVFPFQPKRVASGWLASAFEII*SNRWGK
Trigger: CTTTCCCCATCTGTTGGACCAAATAATCTCAAAGGC...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp TGTGCTCTGGAGGGAGGCTCAAGCCTGATTTGGGCTGAGCTTTCTTaGCCTTGCCTCCAAGGAATGGCCTCAGGCAGTCTTGCAAATAGC +
Preference number: 2 (lower is better)
Translates to: CALEGGSSLIWAELS*PCLQGMASGSLANS
Trigger: GCTATTTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCTCCAGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCATGGGCCATTCTTGGATaGCGTGTTAGCAGCTCACTC +
Preference number: 2 (lower is better)
Translates to: ASGSLANSYQPERMPTGAWAILG*RVSSSL
Trigger: GAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCA...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACCTGGGTGCTGGGCAGTaGTGGGTGGGGCGAGTCTTC +
Preference number: 2 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNLGAGQ*WVGRVF
Trigger: GAAGACTCGCCCCACCCACCACTGCCCAGCACCCAG...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGAAGTTGCTGGGGTCTCTaGAGAACCCACGGCACCTGC +
Preference number: 2 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERSCWGL*RTHGTC
Trigger: GCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACT...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAACTGCCTGTCTTCTCCAAGCCTCAGTTCTaGGTGTGGAGAGGGAGACCC +
Preference number: 2 (lower is better)
Translates to: QIATSLSECQQEQKLPVFSKPQF*VWRGRP
Trigger: GGGTCTCCCTCTCCACACCCAGAACTGAGGCTTGGA...GAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTGGCAGGAGGCTGCCTTaGGAGGTAGTAAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSGRRLP*EVVSSL
Trigger: CAGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCC...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAAGCCTGGGATGCCCCTaGATTAGAGCCATAAAGCTG +
Preference number: 2 (lower is better)
Translates to: ASGSLANSYQPERMPTGASLGCP*IRAIKL
Trigger: CAGCTTTATGGCTCTAATCCAGGGGCATCCCAGGCT...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp TCACTAATCAAACTTACGGTGCCTGGCAGACATCACTCATCAGGATaGCACTGCCGTCTCCCACTGAGCCCAGACCAAACCTCAGATCCC +
Preference number: 2 (lower is better)
Translates to: SLIKLTVPGRHHSSG*HCRLPLSPDQTSDP
Trigger: GGGATCTGAGGTTTGGTCTGGGCTCAGTGGGAGACGGCAGTGCAATCCTGATGAGTGATGTCTGCCAGGCACCGTAAGTTTGATTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCACAAGGGAATGTGATGTaGACCTCTGTGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: ASGSLANSYQPERMPTGAQGNVM*TSVCSW
Trigger: CCAGGAACACACAGAGGTGCACATCACATTCCCTTG...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACCCTCATCTTCTCCCCTaGGGCCAAGAGGACAGCGGG +
Preference number: 2 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNPHLLP*GQEDSG
Trigger: CCCGCTGTCCTCTTGGCCCCAGGGGAGAAGATGAGG...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGTCTCCGTGCAGCCCCTaGGCTTTGATGACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVSPCSP*ALMTSL
Trigger: CAGAGAAGTCATCAAAGCCCAGGGGCTGCACGGAGA...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGTGTGCTGTGTGTCTGTaGATGGTCACTGTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: RCLRDSLAWREEGSGESMCAVCL*MVTVLS
Trigger: AGAGAGGACAGTGACCATCCACAGACACACAGCACA...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp CTGAGCTTTCTTTGCCTTGCCTCCAAGGAATGGCCTCAGGCAGTCTaGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: LSFLCLASKEWPQAV*QIATSLSECQQEQK
Trigger: TTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR TCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTAGGGAGGCTCAAGCCTaGTTTGGGCTGAGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSREAQA*FGLSFL
Trigger: AAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCT...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTATAGCTCTATTCCCCTaGCCCTTCTCCTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSIALFP*PFSWPS
Trigger: AGATGGCCAGGAGAAGGGCCAGGGGAATAGAGCTAT...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAACTTGGCATCAGGTCCTaGTGCAGTGAGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKLGIRS*CSEERG
Trigger: CCCTCTCTCCTCACTGCACCAGGACCTGATGCCAAG...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTaGTTCCTTGCCCTGTTAGTGGGGTCCGAGGAAGTCTCTGTTATG +
Preference number: 2 (lower is better)
Translates to: WLSIQAGFVMSGVVF*FLALLVGSEEVSVM
Trigger: CATAACAGAGACTTCCTCGGACCCCACTAACAGGGCAAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp ATTAAGCTGATGCTAAAGTCAGAGCAGTCCAAAGGCAGGAGGCTGCCTTGGGAGGAGTCCTCAAAGACATaGCAGCTGAATCTCCGTGCA +
Preference number: 2 (lower is better)
Translates to: IKLMLKSEQSKGRRLPWEESSKT*QLNLRA
Trigger: TGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTC...CTCCCAAGGCAGCCTCCTGCCTTTGGACTGCTCTGACTTTAGCATCAGCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCGATTTCTTCCACTCTTaGAGCTGGGGAGTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SLRTEYLWVCICESPCPSDFFHS*SWGVGE
Trigger: TTCCCCAACTCCCCAGCTCCAAGAGTGGAAGAAATC...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR TCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTCCAGATTTCCCTTCATaGCCAGCCCTTTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLPDFPS*PALSLG
Trigger: CCCAAGAGAAAGGGCTGGTCATGAAGGGAAATCTGG...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCAAATCCTCACTTTCTTaGCATCAGGTCCTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SLRTEYLWVCICESPCPSKSSLS*HQVLVQ
Trigger: CTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTT...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp GGAATACTAAGAAATGTGCGGACAGTGAAGAGACAGGAAACCTTGTaGCAGCAGAAATGGCCTCGATGCCTTCGGGATTCTTTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GILRNVRTVKRQETL*QQKWPRCLRDSLAW
Trigger: CCAGGCTAAAGAATCCCGAAGGCATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTCTTAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 90 bp GAGGGAATACTAAGAAATGTGCGGACAGTGAAGAGACAGGAAACCTaGTTGCAGCAGAAATGGCCTCGATGCCTTCGGGATTCTTTAGCC +
Preference number: 2 (lower is better)
Translates to: EGILRNVRTVKRQET*LQQKWPRCLRDSLA
Trigger: GGCTAAAGAATCCCGAAGGCATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTCTTAGTATTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CCA 90 bp CAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAACTGCCTGTCTTCAGAACTGAATACTTGTaGGTGTGCATCTGCGAGTCT +
Preference number: 2 (lower is better)
Translates to: QIATSLSECQQEQKLPVFRTEYL*VCICES
Trigger: AGACTCGCAGATGCACACCCACAAGTATTCAGTTCT...GAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR GCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTAGAGCCATAAAGCTGTaGAATTTGCCTCAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLRAIKL*NLPQSC
Trigger: GCAGGACTGAGGCAAATTGCACAGCTTTATGGCTCT...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp AGACGCACAGGCCAGGGAACACGGGGCTCTAGGCTGTaGCTCCGAGTGTCCCTGGTGACTGGAAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: RRTGQGTRGSRL*LRVSLVTGKPE
Trigger: CTCAGGCTTTCCAGTCACCAGGGACACTCGGAGCCACAGCCTAGAGCCCCGTGTTCCCTGGCCTGTGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGTGCATCCTGGGCCAGTaGCTGGGGTCTCTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLCILGQ*LGSLEN
Trigger: GTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCA...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp GCTGGACCAAAGAGGGCGCTGGGCCTGGTGTTCCTTTaGTCTCTAGAGCAGCCTGCATCCTGGGCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: AGPKRALGLVFL*SLEQPASWASC
Trigger: GCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp GCTGGGCCTGGTGTTCCTTTGGTCTCTAGAGCAGCCTaGATCCTGGGCCAGTTGCTGGGGTCTCTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: AGPGVPLVSRAA*ILGQLLGSLEN
Trigger: GTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp CTGGTGTTCCTTTGGTCTCTAGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTCTGGAGAACCCACGGC +
Preference number: 3 (lower is better)
Translates to: LVFLWSLEQPAS*ASCWGLWRTHG
Trigger: GCCGTGGGTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGACCAAAGGAACACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGCAGTTCCTGGCTGACTaGCCCTCTCTTGTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRQFLAD*PSLVWG
Trigger: CCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACTG...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp GCCAGTTGCTGGGGTCTCTGGAGAACCCACGGCACCTaGCCTGAGTCCAGGCGAGGATACATCAGTCCATAT +
Preference number: 3 (lower is better)
Translates to: ASCWGLWRTHGT*PESRRGYISPY
Trigger: ATATGGACTGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp CACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGACGCACAGGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: HLNLCSRHRASG*ISEGGRRTGQG
Trigger: TCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR CCA 72 bp AGAAACTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTaGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: RNCLSSLSSLRG*PVAGWRAESGL
Trigger: CAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCTGCAGCCCCTGGGCTTaGATGACTTCTCTGAGATTT +
Preference number: 3 (lower is better)
Translates to: LPVFPFQPKRVASGWLASCSPWA*MTSLRF
Trigger: AAATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCA...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp GCGCTGTGGGTTCCGAGTCCTCAAAGACATGGCAGCTaGATCTCCGTGCAGCCCCTGGGCTTTGATGACTTC +
Preference number: 3 (lower is better)
Translates to: ALWVPSPQRHGS*ISVQPLGFDDF
Trigger: GAAGTCATCAAAGCCCAGGGGCTGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTCGGAACCCACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp CGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTaGATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: RAQQEEIRGGST*IFAAGTELLAA
Trigger: TGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR TCA 72 bp AGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGTGTaGCCTCAACACTCCAGGAAGGAGAGTGGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: SLERRGLRGVNV*PQHSRKESGQV
Trigger: CACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp GGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTaGTTGAGGGTTCCTTGGCACATTTGTAGAAAGCTG +
Preference number: 3 (lower is better)
Translates to: GGQWLAGELNQG*LRVPWHICRKL
Trigger: CAGCTTTCTACAAATGTGCCAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGTGCAGCCCCTGGGCTTaGATGACTTCTCTGAGATTT +
Preference number: 3 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRCSPWA*MTSLRF
Trigger: AAATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCA...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp TTGCTGGGGTCTCTGGAGAACCCACGGCACCTGCCCTaGGTCCAGGCGAGGATACATCAGTCCATATTTTTG +
Preference number: 3 (lower is better)
Translates to: LLGSLENPRHLP*VQARIHQSIFL
Trigger: CAAAAATATGGACTGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp AAGCCTCAGTTCTGGGTGTGGAGAGGGAGACCCAGATaGTCTTGGGGATTTCTTCCACTCTTGGAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: KPQFWVWRGRPR*SWGFLPLLELG
Trigger: CCCCAGCTCCAAGAGTGGAAGAAATCCCCAAGATCATCTGGGTCTCCCTCTCCACACCCAGAACTGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp GGTCCAACAGATGGGGAAAGCAAGGATCCTACCAGCTaGGCCATTCTTGGATGCCGTGTTAGCAGCTCACTC +
Preference number: 3 (lower is better)
Translates to: GPTDGESKDPTS*AILGCRVSSSL
Trigger: GAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTTGCTTTCCCCATCTGTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp AGAGAGAGGTGTGGGGAGGTAGGAGCGAGGGCGCGGTaGGAAGTCATGGAATGGTGTTTTCTTAGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: RERCGEVGARAR*EVMEWCFLSCR
Trigger: TCTACAGCTAAGAAAACACCATTCCATGACTTCCCACCGCGCCCTCGCTCCTACCTCCCCACACCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp CTAAAGTCAGAGCAGTCCAAAGGCAGGAGGCTGCCTTaGGAGGTAGTAAGCTCTCTGTCCCTGGAGGTATGC +
Preference number: 3 (lower is better)
Translates to: LKSEQSKGRRLP*EVVSSLSLEVC
Trigger: GCATACCTCCAGGGACAGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCCTTTGGACTGCTCTGACTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp GGAGGCTGGAAGCTGATACAGGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTCTTCCTGAAGAGGGAC +
Preference number: 3 (lower is better)
Translates to: GGWKLIQDAGGL*DRMSSFFLKRD
Trigger: GTCCCTCTTCAGGAAGAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTCCAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAATGCATCCTGGGCCAGTaGCTGGGGTCTCTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKCILGQ*LGSLEN
Trigger: GTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCA...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTTGGCCTCAGGCAGTCTaGCAAATAGCTACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSWPQAV*QIATSL
Trigger: CAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGCCA...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp AGCCTGGGATGCCCCTGGATTAGAGCCATAAAGCTGTaGAATTTGCCTCAGTCCTGCCCAGCATGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: SLGCPWIRAIKL*NLPQSCPAWVF
Trigger: AAAAACCCATGCTGGGCAGGACTGAGGCAAATTGCACAGCTTTATGGCTCTAATCCAGGGGCATCCCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp CAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATaGCAACAGGAGCAGAAACTGCCTGTCTTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: QAVLQIATSLSE*QQEQKLPVFPF
Trigger: GAAAGGGAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp GGCTCAAGCCTGATTTGGGCTGAGCTTTCTTTGCCTTaGCTCCAAGGAATGGCCTCAGGCAGTCTTGCAAAT +
Preference number: 3 (lower is better)
Translates to: GSSLIWAELSLP*LQGMASGSLAN
Trigger: ATTTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp AGTCAATGTGTGACCTCAACACTCCAGGAAGGAGAGTaGGCAAGTGGGATGCCATGGACAGAGCCACAGAAA +
Preference number: 3 (lower is better)
Translates to: SQCVTSTLQEGE*ASGMPWTEPQK
Trigger: TTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACATTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp AGACAACTCAGCTTCTTTTCAGAACTGTCACGCCTGTaGTGTGTGTCTGTGGATGGTCACTGTCCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: RQLSFFSELSRL*CVSVDGHCPLW
Trigger: CCAGAGAGGACAGTGACCATCCACAGACACACAGCACAGGCGTGACAGTTCTGAAAAGAAGCTGAGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp CCTCTCTGGGCCTTTGAGATTATTTGGTCCAACAGATaGGGAAAGCAAGGATCCTACCAGCTGGGCCATTCT +
Preference number: 3 (lower is better)
Translates to: PLWAFEIIWSNR*GKQGSYQLGHS
Trigger: AGAATGGCCCAGCTGGTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAATAATCTCAAAGGCCCAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp ACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATaGACAGAGCCACAGAAAAACAGAAACCTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: TLQEGEWASGMP*TEPQKNRNLFC
Trigger: ACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR-3UTR CAA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGTTTGCTTTTGCCTCCTaGTTGCCTAAATCCTCACTT +
Preference number: 3 (lower is better)
Translates to: RCLRDSLAWREEGSGESMFAFAS*LPKSSL
Trigger: AAGTGAGGATTTAGGCAACAAGGAGGCAAAAGCAAA...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR GCA 72 bp AGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTaGCCTGTTAGTGGGGTCCGAGGAAGTCTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: RVCDERCSLLVP*PVSGVRGSLCY
Trigger: ATAACAGAGACTTCCTCGGACCCCACTAACAGGGCAAGGAACAAGAAGACTACACCGCTCATCACAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR TCA 72 bp AATCCAGTTGCCAACACTCGTCTAGAGTTTGAGAACTaGATACTTGTGGGTGTGCATCTGCGAGTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: NPVANTRLEFEN*ILVGVHLRVSL
Trigger: CAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACTCTAGACGAGTGTTGGCAACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CCA 72 bp AGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATaGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTT +
Preference number: 3 (lower is better)
Translates to: RSLASTDLRCHL*GCQSKLLKGEF
Trigger: AAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR GCA 72 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTaGCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAAC +
Preference number: 3 (lower is better)
Translates to: LASTDLRCHLWG*QSKLLKGEFGN
Trigger: GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTGGCGCGCTCGCAACTTaGCCGGCGCCGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASGALAT*PAPAAF
Trigger: GAAGGCAGCCGGCGCCGGGCAAGTTGCGAGCGCGCC...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520358.7
CDS-3UTR TCA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTGGGGAACCGGGATGCTaGGGCCAGGGGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLAGEPGC*GQGCMW
Trigger: CCACATGCACCCCTGGCCTCAGCATCCCGGTTCCCC...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGCGCGCGGCTCCGCGGTaGATCGCTCGGCGCTACGTC +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQERAAPR*IARRYV
Trigger: GACGTAGCGCCGAGCGATCCACCGCGGAGCCGCGCG...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520358.7
CDS-3UTR CCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGGGAGACGGCGGGTGCTaGGGCCTCGGCTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQEGDGGC*GLGWFG
Trigger: CCCAAACCAGCCGAGGCCCCAGCACCCGCCGTCTCC...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGTCTTCCAGCGGCGGCTaGCGGACCCCGCGCCAAATC +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQESSSGG*RTPRQI
Trigger: GATTTGGCGCGGGGTCCGGCAGCCGCCGCTGGAAGA...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGCCCAGGGTCTGGCTaGACCAAAGAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYGPGSG*TKEGAG
Trigger: CCCAGCGCCCTCTTTGGTCCAGCCAGACCCTGGGCC...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCCGGTGGGGTCCACCATaGCCCAGATGCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LPVFPFQPKRVASGWLASRWGPP*PRCRWP
Trigger: TGGCCATCGGCATCTGGGTCATGGTGGACCCCACCG...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCAGAACCCACGGCACCTaGCCTGAGTCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGRTHGT*PESRRG
Trigger: TCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCT...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGTGGGGAGACGGCGGGTaGTGGGGCCTCGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQWGDGG*WGLGWF
Trigger: AAACCAGCCGAGGCCCCAGCACCCGCCGTCTCCCCA...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTAGTTGCTGGGGTCTCTaGAGAACCCACGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLASCWGL*RTHGTC
Trigger: GCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACT...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGCCCAGGGTCTGGCTaGACCAAAGAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPGPGSG*TKEGAG
Trigger: CCCAGCGCCCTCTTTGGTCCAGCCAGACCCTGGGCC...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCGGCCAGGGGTGCATGTaGGCAGCAGAGCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGGQGCM*AAELTE
Trigger: CTCTGTCAGCTCTGCTGCCCACATGCACCCCTGGCC...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGGGGCCGCGGTACCAGTaGCAGGTCCCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQGPRYQ*QVPLGL
Trigger: GAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCC...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGGCCTCGGCTGGTTTaGGAAATCCTGTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYGPRLV*EILSGP
Trigger: GGGCCCGGACAGGATTTCCCAAACCAGCCGAGGCCC...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCGGCCAGGATGGCTGCTaGGAGCTCTGCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGGQDGC*ELCQED
Trigger: ATCTTCCTGGCAGAGCTCTCAGCAGCCATCCTGGCC...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACCCCGTCCCGACTTTaGGGTTCCCTCCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNTPSRL*GSLRQQ
Trigger: CTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGT...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGCTGGGCAGTGGTGGGTaGGGCGAGTCTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQELGSGG*GESSGF
Trigger: GAAGCCTGAAGACTCGCCCCACCCACCACTGCCCAG...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCAGTTGCTGGGGTCTCTaGAGAACCCACGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGSCWGL*RTHGTC
Trigger: GCAGGTGCCGTGGGTTCTCCAGAGACCCCAGCAACT...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCGGAGCGAGGGCGCGGTaGGAAGTCATGGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGGARAR*EVMEWC
Trigger: ACACCATTCCATGACTTCCCACCGCGCCCTCGCTCC...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGGAGACGGCGGGTGCTaGGGCCTCGGCTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQGDGGC*GLGWFG
Trigger: CCCAAACCAGCCGAGGCCCCAGCACCCGCCGTCTCC...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTGGAGGAGGGGGCTTCTaGGGAGACGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESGGGGF*GDGGCW
Trigger: CCAGCACCCGCCGTCTCCCCAGAAGCCCCCTCCTCC...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCGGTGGGGTCCACCATaGCCCAGATGCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQRWGPP*PRCRWP
Trigger: TGGCCATCGGCATCTGGGTCATGGTGGACCCCACCG...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGGATGTAGGCGCCCGTaGGGAGCAGAGGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNGCRRP*GAEDWQ
Trigger: CTGCCAATCCTCTGCTCCTCACGGGCGCCTACATCC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTGAGTCCTGGATGCAGTaGCAGCAGCCTGGAGACAAC +
Preference number: 4 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASESWMQ*QQPGDN
Trigger: GTTGTCTCCAGGCTGCTGTCACTGCATCCAGGACTC...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACCTGGGCAGTGGTGGGTaGGGCGAGTCTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNLGSGG*GESSGF
Trigger: GAAGCCTGAAGACTCGCCCCACCCACCACTGCCCAG...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNEQPAS*ASCWGL
Trigger: GAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTCGGTGGGGTCCACCATaGCCCAGATGCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESRWGPP*PRCRWP
Trigger: TGGCCATCGGCATCTGGGTCATGGTGGACCCCACCG...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGTGTGGGCAGCAGAGCTaGCAGAGTCCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQECGQQS*QSPGCS
Trigger: ACTGCATCCAGGACTCTGTCAGCTCTGCTGCCCACA...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCAGGGGAACCGGGATGCTaGGGCCAGGGGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADAGEPGC*GQGCMW
Trigger: CCACATGCACCCCTGGCCTCAGCATCCCGGTTCCCC...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCAGTGGGCAAGTGGGATaGCATGGACAGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGSGQVG*HGQSHR
Trigger: TCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACT...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCCACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGHRASG*ISEGGR
Trigger: TCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTG...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTCTCACCTCTTTCCACTaGTGTCTTTCCCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLALTSFH*CLSLWA
Trigger: GGCCCAAAGGGAAAGACACCAGTGGAAAGAGGTGAG...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGGAGCGAGGGCGCGGTaGGAAGTCATGGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQGARAR*EVMEWC
Trigger: ACACCATTCCATGACTTCCCACCGCGCCCTCGCTCC...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCCAGGCACAGAGCTTCTaGCTGCATCTCAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPVFPFQPKRVASGWLASQAQSF*LHLRRG
Trigger: CCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTG...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACCTGAGCTCAGAGACCTaGTGGGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNLSSET*WEGKDW
Trigger: CCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAG...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCATGCTGGGGCCTCGGCTaGTTTGGGAAATCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPCWGLG*FGKSCP
Trigger: CGGACAGGATTTCCCAAACCAGCCGAGGCCCCAGCA...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGGGAGGAGGGGGCTTCTaGGGAGACGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RCLRDSLAWREEGSGESMGGGGF*GDGGCW
Trigger: CCAGCACCCGCCGTCTCCCCAGAAGCCCCCTCCTCC...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGGATGTAGGCGCCCGTaGGGAGCAGAGGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTGCRRP*GAEDWQ
Trigger: CTGCCAATCCTCTGCTCCTCACGGGCGCCTACATCC...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp TCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACCCACGGCACCTGCCCTaGGTCCAGGCGAGGATACAT +
Preference number: 4 (lower is better)
Translates to: SLQQAQSFWLHLRRGQTHPRHLP*VQARIH
Trigger: ATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGG...GTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTGGGGAGGCTGGAAGCTaGTACAGGATGCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESGEAGS*YRMPVA
Trigger: AGCCACCGGCATCCTGTATCAGCTTCCAGCCTCCCC...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGGGGAGGCTGGAAGCTaGTACAGGATGCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRGEAGS*YRMPVA
Trigger: AGCCACCGGCATCCTGTATCAGCTTCCAGCCTCCCC...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCAGGGAGGCTCAAGCCTaGTTTGGGCTGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGREAQA*FGLSFL
Trigger: AAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCT...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGTTGTGGGTGTGCATCTaGGAGTCTCCCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQLWVCI*ESPCPS
Trigger: GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAA...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGTGGGGAGACGGCGGGTaGTGGGGCCTCGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWWGDGG*WGLGWF
Trigger: AAACCAGCCGAGGCCCCAGCACCCGCCGTCTCCCCA...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACATGGCCAGTACCCCGATaGCAAGGGCTCCGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTWPVPR*QGLRPS
Trigger: ACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCA...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGGGCCATACCCTCTACTaGATGCCCCGGAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQGHTLY*MPRKRH
Trigger: GTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGCC...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGACCAAAGAGGGCGCTaGGCCTGGTGTTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQDQRGR*AWCSFG
Trigger: ACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTC...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTGTGCTGTGTGTCTGTaGATGGTCACTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLACAVCL*MVTVLS
Trigger: AGAGAGGACAGTGACCATCCACAGACACACAGCACA...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGTTCCACTCTTGGAGCTaGGGAGTTGGGGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: TLSSETWWEGKDWRAQQEFHSWS*GVGEGQ
Trigger: CTGTCCTTCCCCAACTCCCCAGCTCCAAGAGTGGAA...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCCTCCAGGAAGGAGAGTaGGCAAGTGGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: RYQWQVPLGLRSLASTDLLQEGE*ASGMPW
Trigger: CCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAG...GAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGAGCCTGAGGGGAGGCTaGAAGCTGATACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLSLRGG*KLIQDA
Trigger: GGCATCCTGTATCAGCTTCCAGCCTCCCCTCAGGCT...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTAGCTCAGAGACCTGGTaGGAGGGCAAGGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESSSETW*EGKDWR
Trigger: CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCT...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCCTTGCCTCCAAGGAATaGCCTCAGGCAGTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGLASKE*PQAVLQ
Trigger: TTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAG...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAGACAAGGGAGGCTGTaGACAGGCCTGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQRQGRL*TGLSTK
Trigger: CTTGGTGCTCAGGCCTGTCCACAGCCTCCCTTGTCT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYRSRRC*GSPCNS
Trigger: GCTGTTACACGGTGATCCTCAACACCTTCGAGACCT...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGTCCAGCAGCCACCCCTaGTCTATCAGGGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQSSSHP*SIRVGA
Trigger: TGCTCCTACCCTGATAGATCAGGGGTGGCTGCTGGA...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGTCCGAGTGTCCCTGGTaGCTGGAAAGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRSECPW*LESLRG
Trigger: TCCCCTCAGGCTTTCCAGTCACCAGGGACACTCGGA...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGGGTGGTCCAGGAGATaGTCACCTCTTTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQGWSRR*SPLSTG
Trigger: ACCAGTGGAAAGAGGTGAGCATCTCCTGGACCACCC...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCACACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPHRASG*ISEGGR
Trigger: TCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTG...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCATGGCGAAAAGCTCGATaGCCAGTACCCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSWRKAR*PVPRWQ
Trigger: TTGCCATCGGGGTACTGGCCATCGAGCTTTTCGCCA...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGGAGCAGCCTGCATCCTaGGCCAGTTGCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPGSQELSFYGPQVSFMGEQPAS*ASCWGL
Trigger: GAGACCCCAGCAACTGGCCCAGGATGCAGGCTGCTC...CCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGTTGCCCTCTCTTGTCTaGGGGAACCGGGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQLPSLV*GNRDAE
Trigger: CTCAGCATCCCGGTTCCCCCAGACAAGAGAGGGCAA...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCCGGGGCTCTAGGCTGTaGCTCCGAGTGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSRGSRL*LRVSLV
Trigger: CACCAGGGACACTCGGAGCCACAGCCTAGAGCCCCG...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGCGGGGCTCTAGGCTGTaGCTCCGAGTGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RCLRDSLAWREEGSGESMRGSRL*LRVSLV
Trigger: CACCAGGGACACTCGGAGCCACAGCCTAGAGCCCCG...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGCTGAGCTCAGAGACCTaGTGGGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRLSSET*WEGKDW
Trigger: CCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAG...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCGGGCCGCGGTACCAGTaGCAGGTCCCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSGPRYQ*QVPLGL
Trigger: GAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCC...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGAAGCTCAGCTCACCTaGAGCTTGAGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWREAQLT*SLRVVQ
Trigger: CTGGACCACCCTCAAGCTTCAGGTGAGCTGAGCTTC...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGAGTCTTCAGGCCCGTTaGCCCCGCAGCAACCAAATG +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRSLQAR*PRSNQM
Trigger: CATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACT...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTGTGGGCAGCAGAGCTaGCAGAGTCCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESCGQQS*QSPGCS
Trigger: ACTGCATCCAGGACTCTGTCAGCTCTGCTGCCCACA...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCAAGGGAGGCTCAAGCCTaGTTTGGGCTGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSREAQA*FGLSFL
Trigger: AAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCT...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGCTTTGGGCCCAGAGGTaGCAAGGTTCTCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQLWAQR*QGSLTV
Trigger: CACTGTAAGAGAACCTTGGCACCTCTGGGCCCAAAG...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTAGAACCCACGGCACCTaGCCTGAGTCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGRTHGT*PESRRG
Trigger: TCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCT...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTGTCTCTAGAGCAGCCTaGATCCTGGGCCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESVSRAA*ILGQLL
Trigger: CAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGAC...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGTGGGCCATTCTTGGATaGCGTGTTAGCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQWAILG*RVSSSL
Trigger: GAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCA...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGAAGCTGATACAGGATaGCGGTGGCTTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNEADTG*RWLVRQ
Trigger: CTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGCTCACCTCTTTCCACTaGTGTCTTTCCCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQLTSFH*CLSLWA
Trigger: GGCCCAAAGGGAAAGACACCAGTGGAAAGAGGTGAG...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGTGGCCAGTACCCCGATaGCAAGGGCTCCGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWWPVPR*QGLRPS
Trigger: ACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCA...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACCCCGGAAGAGGCACATaGCAAAGATCATGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYPGRGT*QRSWRK
Trigger: TTTTCGCCATGATCTTTGCCATGTGCCTCTTCCGGG...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACTGTGCTGTGTGTCTGTaGATGGTCACTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYCAVCL*MVTVLS
Trigger: AGAGAGGACAGTGACCATCCACAGACACACAGCACA...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGGAGGAGGCAGTTCCTaGCTGACTTGCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQGGGSS*LTCPLL
Trigger: CAAGAGAGGGCAAGTCAGCCAGGAACTGCCTCCTCC...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCAACCTCTGTGTGTTCCTaGGGACTCAGAGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSTSVCS*GLRERC
Trigger: ACACCTCTCTCTGAGTCCCCAGGAACACACAGAGGT...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGACCTCTGTGTGTTCCTaGGGACTCAGAGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQTSVCS*GLRERC
Trigger: ACACCTCTCTCTGAGTCCCCAGGAACACACAGAGGT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTCCAAGCCTCAGTTCTaGGTGTGGAGAGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESSKPQF*VWRGRP
Trigger: GGGTCTCCCTCTCCACACCCAGAACTGAGGCTTGGA...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCGCAAGTGGGATGCCATaGACAGAGCCACAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPVFPFQPKRVASGWLASASGMP*TEPQKN
Trigger: GTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGC...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCCGGGGCTCTAGGCTGTaGCTCCGAGTGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFRGSRL*LRVSLV
Trigger: CACCAGGGACACTCGGAGCCACAGCCTAGAGCCCCG...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCCTCAGGTGTCATTTATaGGGTTGCCAGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LPVFPFQPKRVASGWLASLRCHL*GCQSKL
Trigger: CAGCTTGCTCTGGCAACCCCATAAATGACACCTGAG...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGGCCGCGGTACCAGTaGCAGGTCCCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKGPRYQ*QVPLGL
Trigger: GAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCC...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGCCTGGGATGCCCCTaGATTAGAGCCATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RYQWQVPLGLRSLASTDLSLGCP*IRAIKL
Trigger: CAGCTTTATGGCTCTAATCCAGGGGCATCCCAGGCT...GAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAGCCTGGGATGCCCCTaGATTAGAGCCATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQSLGCP*IRAIKL
Trigger: CAGCTTTATGGCTCTAATCCAGGGGCATCCCAGGCT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTGGCCAGTGGCTGGCTaGCGAGCTGAATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSWPVAG*RAESGL
Trigger: CAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCA...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCACACCAGAACCTGCTGTaGGTTGTATCTGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSHQNLL*VVSGPS
Trigger: GCTTGGTCCAGATACAACCCACAGCAGGTTCTGGTG...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCAGAAGCTCAGCTCACCTaGAGCTTGAGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADAEAQLT*SLRVVQ
Trigger: CTGGACCACCCTCAAGCTTCAGGTGAGCTGAGCTTC...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGCCAGGATGGCTGCTaGGAGCTCTGCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMGQDGC*ELCQED
Trigger: ATCTTCCTGGCAGAGCTCTCAGCAGCCATCCTGGCC...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTCCGAGTGTCCCTGGTaGCTGGAAAGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGSECPW*LESLRG
Trigger: TCCCCTCAGGCTTTCCAGTCACCAGGGACACTCGGA...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCATTTGTAGAAAGCTGCTaGGGGGCAGTCTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSFVESC*GAVLCL
Trigger: CAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAA...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGAAGCCTGATTTGGGCTaGGCTTTCTTTGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQKPDLG*AFFALP
Trigger: AGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTT...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGCAGTGGACCAGGGATTaGGCTGTGGGTTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMQWTRD*AVGSES
Trigger: GGACTCGGAACCCACAGCGCAATCCCTGGTCCACTG...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTAGTTCCTGGCTGACTTaGCCTCTCTTGTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESSSWLT*PLLSGG
Trigger: TCCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACT...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACACACAGAGCTTCTGGCTaGATCTCAGAAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTHRASG*ISEGGR
Trigger: TCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTG...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp GGGTGGCCAGTGGCTGGCTGGCGAGCTGAATCAGGGCTGATTGAGGGTTCCTTGCTCAGACCAGCCATTTaGCTCTTCCAAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWPVAGWRAESGLIEGSLLRPAI*LFQKAG
Trigger: CCCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAG...CAAGGAACCCTCAATCAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAGCTTTCTTTGCCTTaGCTCCAAGGAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPELSLP*LQGMAS
Trigger: TGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTC...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAGTCTTCTTGTTCCTTaGCCTGTTAGTGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQSLLVP*PVSGVR
Trigger: TCGGACCCCACTAACAGGGCAAGGAACAAGAAGACT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGACAGTCGCCTTCCATaGTGCTCCACCTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ASGSLANSYQPERMPTGADSRLP*CSTWRA
Trigger: GGCTCTCCAGGTGGAGCACCATGGAAGGCGACTGTC...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTAGGAGCGAGGGCGCGGTGGGAAGTCATGGAATGGTGTTTTCTTAGCTGTAGACCTCATCTTCTCCCCTaGGGCCAAGAGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: VGARARWEVMEWCFLSCRPHLLP*GQEDSG
Trigger: CCCGCTGTCCTCTTGGCCCCAGGGGAGAAGATGAGG...TCTACAGCTAAGAAAACACCATTCCATGACTTCCCACCGCGCCCTCGCTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCCAGGGATTGCGCTGTaGGTTCCGAGTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQPGIAL*VPSPQR
Trigger: TCTTTGAGGACTCGGAACCCACAGCGCAATCCCTGG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGATTTCTTCCACTCTTaGAGCTGGGGAGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNDFFHS*SWGVGE
Trigger: TTCCCCAACTCCCCAGCTCCAAGAGTGGAAGAAATC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGATTTCTTCCACTCTTaGAGCTGGGGAGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQDFFHS*SWGVGE
Trigger: TTCCCCAACTCCCCAGCTCCAAGAGTGGAAGAAATC...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGATACAGGATGCCGGTaGCTTGTGAGACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQDTGCR*LVRQNE
Trigger: CTCATTCTGTCTCACAAGCCACCGGCATCCTGTATC...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGATACAGGATGCCGGTaGCTTGTGAGACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: SRHRASGCISEGGRRTGQDTGCR*LVRQNE
Trigger: CTCATTCTGTCTCACAAGCCACCGGCATCCTGTATC...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCAAGCCTGAGGGGAGGCTaGAAGCTGATACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADASLRGG*KLIQDA
Trigger: GGCATCCTGTATCAGCTTCCAGCCTCCCCTCAGGCT...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCAGCTCAGAGACCTGGTaGGAGGGCAAGGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFSSETW*EGKDWR
Trigger: CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCT...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGTGGGCCCCAGAAGCCTaGGATGCCCCTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: RCLRDSLAWREEGSGESMWAPEA*DAPGLE
Trigger: CTCTAATCCAGGGGCATCCCAGGCTTCTGGGGCCCA...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTGGGCCTCGGCTGGTTTaGGAAATCCTGTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSGPRLV*EILSGP
Trigger: GGGCCCGGACAGGATTTCCCAAACCAGCCGAGGCCC...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTGGATGTAGGCGCCCGTaGGGAGCAGAGGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPWHICRKLLRGSLVSALGCRRP*GAEDWQ
Trigger: CTGCCAATCCTCTGCTCCTCACGGGCGCCTACATCC...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRRSRRC*GSPCNS
Trigger: GCTGTTACACGGTGATCCTCAACACCTTCGAGACCT...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGACCACGGCACCTGCCCTaGGTCCAGGCGAGGATACAT +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRPRHLP*VQARIH
Trigger: ATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGG...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQQAQSFWLHLRRGQTHDAGGL*DRMSSF
Trigger: GAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATC...GTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESDAGGL*DRMSSF
Trigger: GAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATC...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCGTCTCTAGAGCAGCCTaGATCCTGGGCCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSVSRAA*ILGQLL
Trigger: CAGCAACTGGCCCAGGATGCAGGCTGCTCTAGAGAC...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAATCTGCGAGTCTCCCTaGCCAAGCCTGGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQICESP*PSLEGI
Trigger: TATTCCCTCCAGGCTTGGGCAGGGAGACTCGCAGAT...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGGTCCACCTGAATCTTTaGAGCAGGCACAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQVHLNL*SRHRAS
Trigger: AGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGAC...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp CGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGAGCCATAAAGCTGTaGAATTTGCCTCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RYQWQVPLGLRSLASTDLRAIKL*NLPQSC
Trigger: GCAGGACTGAGGCAAATTGCACAGCTTTATGGCTCT...GAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGGGCTGAGCTTTCTTTaGCTTGCCTCCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTGLSFL*LASKEW
Trigger: CCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCC...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TGTGTGACCTCAACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATGGACACCATGGTGCTCCACCTaGAGAGCCAGCGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: CVTSTLQEGEWASGMPWTPWCST*RASVEM
Trigger: CATCTCAACGCTGGCTCTCCAGGTGGAGCACCATGG...TGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGCCATGGTGCTCCACCTaGAGAGCCAGCGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMPWCST*RASVEM
Trigger: CATCTCAACGCTGGCTCTCCAGGTGGAGCACCATGG...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCATGGCGAAAAGCTCGATaGCCAGTACCCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADAWRKAR*PVPRWQ
Trigger: TTGCCATCGGGGTACTGGCCATCGAGCTTTTCGCCA...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CTGTTAAAGGGCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAACCTCATCTTCTCCCCTaGGGCCAAGAGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLKGEFGNTELRDLVGGQPHLLP*GQEDSG
Trigger: CCCGCTGTCCTCTTGGCCCCAGGGGAGAAGATGAGG...TTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGCCCTTTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGATAGCTCTATTCCCCTaGCCCTTCTCCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQIALFP*PFSWPS
Trigger: AGATGGCCAGGAGAAGGGCCAGGGGAATAGAGCTAT...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAATCTCCGTGCAGCCCCTaGGCTTTGATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQSPCSP*ALMTSL
Trigger: CAGAGAAGTCATCAAAGCCCAGGGGCTGCACGGAGA...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGTTGCCCTCTCTTGTCTaGGGGAACCGGGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWLPSLV*GNRDAE
Trigger: CTCAGCATCCCGGTTCCCCCAGACAAGAGAGGGCAA...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTCCAAGCCTCAGTTCTaGGTGTGGAGAGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSSKPQF*VWRGRP
Trigger: GGGTCTCCCTCTCCACACCCAGAACTGAGGCTTGGA...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGCGGGATTCTTTAGCCTaGAGAGAAGAGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPGSQELSFYGPQVSFMGRDSLA*REEGSG
Trigger: CCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCG...CCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGAGCCTGAGGGGAGGCTaGAAGCTGATACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWSLRGG*KLIQDA
Trigger: GGCATCCTGTATCAGCTTCCAGCCTCCCCTCAGGCT...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAACTGAGCTCAGAGACCTaGTGGGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RVHLNLCSRHRASGCISELSSET*WEGKDW
Trigger: CCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAG...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTTGGCCAGTGGCTGGCTaGCGAGCTGAATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSWPVAG*RAESGL
Trigger: CAGCCCTGATTCAGCTCGCCAGCCAGCCACTGGCCA...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTTCCAGCCTAAGAGGGTaGCCAGTGGCTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSSSLRG*PVAGWR
Trigger: TCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGA...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGATCCAGCCTAAGAGGGTaGCCAGTGGCTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRSSLRG*PVAGWR
Trigger: TCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGA...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGTCTTGTGTCTGCCCTTaGACCCACCTTAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQSCVCP*THLSQI
Trigger: AATCTGGCTAAGGTGGGTTCAAGGGCAGACACAAGA...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACATTTGTAGAAAGCTGCTaGGGGGCAGTCTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTFVESC*GAVLCL
Trigger: CAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAA...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGAGTCGCCTTCCATGGTaGTCCACCTGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVSRLPW*STWRAS
Trigger: GCTGGCTCTCCAGGTGGAGCACCATGGAAGGCGACT...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGATACCCTCTACTGGATaGCCCGGAAGAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWIPSTG*PGRGTW
Trigger: CCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTAT...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp ACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAACAGTGGACCAGGGATTaGGCTGTGGGTTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TDLRCHLWGCQSKLLKGEQWTRD*AVGSES
Trigger: GGACTCGGAACCCACAGCGCAATCCCTGGTCCACTG...TTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACACAAGGGAATGTGATGTaGACCTCTGTGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTQGNVM*TSVCSW
Trigger: CCAGGAACACACAGAGGTGCACATCACATTCCCTTG...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTAAGTGGGCAAGTGGGATaGCATGGACAGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLSGQVG*HGQSHR
Trigger: TCTGTGGCTCTGTCCATGGCATCCCACTTGCCCACT...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCATCTGCGAGTCTCCCTaGCCAAGCCTGGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSICESP*PSLEGI
Trigger: TATTCCCTCCAGGCTTGGGCAGGGAGACTCGCAGAT...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGTCCACCTGAATCTTTaGAGCAGGCACAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQVHLNL*SRHRAS
Trigger: AGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGAC...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCTCAGACCAGCCATTTaGCTCTTCCAAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQLRPAI*LFQKAG
Trigger: CCCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGCCCAGAAGCCTGGGATaGCCCTGGATTAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: RCLRDSLAWREEGSGESMPRSLG*PWIRAI
Trigger: TATGGCTCTAATCCAGGGGCATCCCAGGCTTCTGGG...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CTGCCTGTCTTCCCTTTCCAGCCTAAGAGGGTGGCCAGTGGCTGGCTGGCGAGCATTCACAAAAACCAGTaGAAAACCATCAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPVFPFQPKRVASGWLASIHKNQ*KTISVG
Trigger: GCCCACACTGATGGTTTTGCACTGGTTTTTGTGAAT...GCTCGCCAGCCAGCCACTGGCCACCCTCTTAGGCTGGAAAGGGAAGACAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAACCCCGTCCCGACTTTaGGGTTCCCTCCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKTPSRL*GSLRQQ
Trigger: CTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGT...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAGGCCATACCCTCTACTaGATGCCCCGGAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRGHTLY*MPRKRH
Trigger: GTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGCC...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTACTGGGTGCTGGGCAGTaGTGGGTGGGGCGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLLGAGQ*WVGRVF
Trigger: GAAGACTCGCCCCACCCACCACTGCCCAGCACCCAG...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTCTGGGTGCTGGGCAGTaGTGGGTGGGGCGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLLGAGQ*WVGRVF
Trigger: GAAGACTCGCCCCACCCACCACTGCCCAGCACCCAG...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTCTCCGTGCAGCCCCTaGGCTTTGATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSSPCSP*ALMTSL
Trigger: CAGAGAAGTCATCAAAGCCCAGGGGCTGCACGGAGA...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACGCAGTGACAGCAGCCTaGAGACAACTCAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLQQAQSFWLHLRRGQTHAVTAA*RQLSFF
Trigger: AAAGAAGCTGAGTTGTCTCCAGGCTGCTGTCACTGC...GTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCAGTGACAGCAGCCTaGAGACAACTCAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ANLVTLSSETWWEGKDWRAVTAA*RQLSFF
Trigger: AAAGAAGCTGAGTTGTCTCCAGGCTGCTGTCACTGC...CCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGAGGTATGCAAGAGGGTaGAGAAGTCTTGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQRYARG*RSLGKD
Trigger: ATCCTTGCCAAGACTTCTCCACCCTCTTGCATACCT...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGTCAACATATGACCCATaGGGGAAGGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWSTYDP*GKEEGA
Trigger: AGCCCCCTCCTCCTTCCCCCATGGGTCATATGTTGA...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCATCAACATATGACCCATaGGGGAAGGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASGSLANSYQPERMPTGASTYDP*GKEEGA
Trigger: AGCCCCCTCCTCCTTCCCCCATGGGTCATATGTTGA...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 72 bp GCTAAAGTCAGAGCAGTCCAAAGGCAGGAGGCTGCCTaGGGAGGTAGTAAGCTCTCTGTCCCTGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: AKVRAVQRQEAA*GGSKLSVPGGM
Trigger: CATACCTCCAGGGACAGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCCTTTGGACTGCTCTGACTTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 72 bp GAGGGAGGCTCAAGCCTGATTTGGGCTGAGCTTTCTTaGCCTTGCCTCCAAGGAATGGCCTCAGGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: EGGSSLIWAELS*PCLQGMASGSL
Trigger: AAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTTGAGCCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCCAGGATGGCTGCTaGGAGCTCTGCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKGQDGC*ELCQED
Trigger: ATCTTCCTGGCAGAGCTCTCAGCAGCCATCCTGGCC...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCTCCAGCAGCCACCCCTaGTCTATCAGGGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSSSSHP*SIRVGA
Trigger: TGCTCCTACCCTGATAGATCAGGGGTGGCTGCTGGA...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TGTGTGACCTCAACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATGGACAGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CVTSTLQEGEWASGMPWTDAGGL*DRMSSF
Trigger: GAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATC...TGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGTGTGACCTCAACACTCCAGGAAGGAGAGTGGGCAAGTGGGATGCCATGGACACTTTGGGCCCAGAGGTaGCAAGGTTCTCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: CVTSTLQEGEWASGMPWTLWAQR*QGSLTV
Trigger: CACTGTAAGAGAACCTTGGCACCTCTGGGCCCAAAG...TGTCCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAGTGTTGAGGTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGAAGTCGCCTTCCATGGTaGTCCACCTGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERSRLPW*STWRAS
Trigger: GCTGGCTCTCCAGGTGGAGCACCATGGAAGGCGACT...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAATACCCTCTACTGGATaGCCCGGAAGAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: RVHLNLCSRHRASGCISEIPSTG*PGRGTW
Trigger: CCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTAT...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACATCTTGCAATCCAGTTaGCAACACTCGTCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNILQSS*QHSSRV
Trigger: AACTCTAGACGAGTGTTGGCAACTGGATTGCAAGAT...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GGGGTCTCTGGAGAACCCACGGCACCTGCCCTGAGTCCAGGCGAGGATACATCAATCTTGCAATCCAGTTaGCAACACTCGTCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GVSGEPTAPALSPGEDTSILQSS*QHSSRV
Trigger: AACTCTAGACGAGTGTTGGCAACTGGATTGCAAGAT...TGATGTATCCTCGCCTGGACTCAGGGCAGGTGCCGTGGGTTCTCCAGAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTAGAGCCATAAAGCTGTaGAATTTGCCTCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESRAIKL*NLPQSC
Trigger: GCAGGACTGAGGCAAATTGCACAGCTTTATGGCTCT...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACACCCCGTCCCGACTTTaGGGTTCCCTCCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNTPSRL*GSLRQQ
Trigger: CTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGT...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTTGGCCAGTACCCCGATaGCAAGGGCTCCGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLWPVPR*QGLRPS
Trigger: ACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCA...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCATAGCTCTATTCCCCTaGCCCTTCTCCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSIALFP*PFSWPS
Trigger: AGATGGCCAGGAGAAGGGCCAGGGGAATAGAGCTAT...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ATTAAGCTGATGCTAAAGTCAGAGCAGTCCAAAGGCAGGAGGCTGCCTTGGGAGGACCAAAGAGGGCGCTaGGCCTGGTGTTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: IKLMLKSEQSKGRRLPWEDQRGR*AWCSFG
Trigger: ACCAAAGGAACACCAGGCCCAGCGCCCTCTTTGGTC...CTCCCAAGGCAGCCTCCTGCCTTTGGACTGCTCTGACTTTAGCATCAGCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAGGAGGAGGCAGTTCCTaGCTGACTTGCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRGGGSS*LTCPLL
Trigger: CAAGAGAGGGCAAGTCAGCCAGGAACTGCCTCCTCC...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGGGCAGGAGGCTGCCTTaGGAGGTAGTAAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVGRRLP*EVVSSL
Trigger: CAGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCC...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCCTCCAGGAAGGAGAGTaGGCAAGTGGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSLQEGE*ASGMPW
Trigger: CCATGGCATCCCACTTGCCCACTCTCCTTCCTGGAG...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGCAGGCACAGAGCTTCTaGCTGCATCTCAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVQAQSF*LHLRRG
Trigger: CCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTG...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGCTGGGGCTAAGCATGTaGGTGGTTCAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVLGLSM*VVQEGQ
Trigger: CTGCCCCTCTTGAACCACCCACATGCTTAGCCCCAG...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGTGCTGGGGCCTCGGCTaGTTTGGGAAATCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKCWGLG*FGKSCP
Trigger: CGGACAGGATTTCCCAAACCAGCCGAGGCCCCAGCA...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 72 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTaGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPES*QQAQSFWLHLR
Trigger: TCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR CAA 72 bp CTTTGCCTTGCCTCCAAGGAATGGCCTCAGGCAGTCTaGCAAATAGCTACCAGCCTGAGCGAATGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LCLASKEWPQAV*QIATSLSECQQ
Trigger: CTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGAAGTCTTCAGGCCCGTTaGCCCCGCAGCAACCAAATG +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERSLQAR*PRSNQM
Trigger: CATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACT...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGAGTCTTCAGGCCCGTTaGCCCCGCAGCAACCAAATG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKSLQAR*PRSNQM
Trigger: CATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACT...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: RVHLNLCSRHRASGCISERSRRC*GSPCNS
Trigger: GCTGTTACACGGTGATCCTCAACACCTTCGAGACCT...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR TCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGAGAGTCCTGGATGCAGTaGCAGCAGCCTGGAGACAAC +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERESWMQ*QQPGDN
Trigger: GTTGTCTCCAGGCTGCTGTCACTGCATCCAGGACTC...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CTGTTAAAGGGCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGGTGGTCCAGGAGATaGTCACCTCTTTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: LLKGEFGNTELRDLVGGQGWSRR*SPLSTG
Trigger: ACCAGTGGAAAGAGGTGAGCATCTCCTGGACCACCC...TTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGCCCTTTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGTCTGCAAAAGGATTATaGTCGCGTCTCCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQSAKGL*SRLQKS
Trigger: TGATTTCTGGAGACGCGAGCATAATCCTTTTGCAGA...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGATTGTGGGTGTGCATCTaGGAGTCTCCCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERLWVCI*ESPCPS
Trigger: GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAA...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCGAAGCTGATACAGGATaGCGGTGGCTTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFEADTG*RWLVRQ
Trigger: CTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTC...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp ACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAAGCCACCACCAGAACCTaGTGTGGGTTGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: TDLRCHLWGCQSKLLKGEATTRT*CGLYLD
Trigger: GTCCAGATACAACCCACAGCAGGTTCTGGTGGTGGC...TTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGAACAAAGAGGTATCCCTaGCCACCCCTCCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERTKRYP*PPLPHN
Trigger: GTTGTGGGGGAGGGGTGGGCAGGGATACCTCTTTGT...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGACAAAGAGGTATCCCTaGCCACCCCTCCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKTKRYP*PPLPHN
Trigger: GTTGTGGGGGAGGGGTGGGCAGGGATACCTCTTTGT...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGAGTCTTCTTGTTCCTTaGCCTGTTAGTGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWSLLVP*PVSGVR
Trigger: TCGGACCCCACTAACAGGGCAAGGAACAAGAAGACT...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGCCCGGAAGAGGCACATaGCAAAGATCATGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWPGRGT*QRSWRK
Trigger: TTTTCGCCATGATCTTTGCCATGTGCCTCTTCCGGG...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGCTTGGCATCAGGTCCTaGTGCAGTGAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKLGIRS*CSEERG
Trigger: CCCTCTCTCCTCACTGCACCAGGACCTGATGCCAAG...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAAAATCCTCACTTTCTTaGCATCAGGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQKSSLS*HQVLVQ
Trigger: CTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTT...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCAAAATCCTCACTTTCTTaGCATCAGGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADAKSSLS*HQVLVQ
Trigger: CTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTT...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCGAGTCCTCAAAGACATaGCAGCTGAATCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSESSKT*QLNLRA
Trigger: TGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTC...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTAGAGTCCTCAAAGACATaGCAGCTGAATCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLESSKT*QLNLRA
Trigger: TGCACGGAGATTCAGCTGCCATGTCTTTGAGGACTC...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCCCAGGGATTGCGCTGTaGGTTCCGAGTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSPGIAL*VPSPQR
Trigger: TCTTTGAGGACTCGGAACCCACAGCGCAATCCCTGG...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAATTTGGTCCAACAGATaGGGAAAGCAAGGATCCTAC +
Preference number: 4 (lower is better)
Translates to: FGNTELRDLVGGQGLAGTIWSNR*GKQGSY
Trigger: GTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAAT...TGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTTTCCACTCTTGGAGCTaGGGAGTTGGGGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: VPWHICRKLLRGSLVSALFHSWS*GVGEGQ
Trigger: CTGTCCTTCCCCAACTCCCCAGCTCCAAGAGTGGAA...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGCGGGATTCTTTAGCCTaGAGAGAAGAGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVRDSLA*REEGSG
Trigger: CCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCG...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGCAAACTTACGGTGCCTaGCAGACATCACTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMQTYGA*QTSLIR
Trigger: CCTGATGAGTGATGTCTGCCAGGCACCGTAAGTTTG...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCCTCAGGTGTCATTTATaGGGTTGCCAGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSLRCHL*GCQSKL
Trigger: CAGCTTGCTCTGGCAACCCCATAAATGACACCTGAG...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGACTGGGGCTAAGCATGTaGGTGGTTCAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERLGLSM*VVQEGQ
Trigger: CTGCCCCTCTTGAACCACCCACATGCTTAGCCCCAG...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGCTGGGGCTAAGCATGTaGGTGGTTCAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKLGLSM*VVQEGQ
Trigger: CTGCCCCTCTTGAACCACCCACATGCTTAGCCCCAG...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCGCTGTGGGTTGTATCTaGACCAAGCCAGCTAAACCC +
Preference number: 4 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFAVGCI*TKPAKP
Trigger: GGGTTTAGCTGGCTTGGTCCAGATACAACCCACAGC...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGAGGAAGTCTCTGTTATaGGCTGTTGTATTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQRKSLL*AVVFRG
Trigger: ACCCCGAAATACAACAGCCCATAACAGAGACTTCCT...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTTCAGAGCAGGAAAGTaGCTTTCGATACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGFRAGK*LSIQAG
Trigger: CCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTGAA...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGAGACAAGGGAGGCTGTaGACAGGCCTGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKRQGRL*TGLSTK
Trigger: CTTGGTGCTCAGGCCTGTCCACAGCCTCCCTTGTCT...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 72 bp ATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTaGTTCCTTGCCCTGTTAGTGGGGTCCGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: IQAGFVMSGVVF*FLALLVGSEEV
Trigger: GACTTCCTCGGACCCCACTAACAGGGCAAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTGAAATGTGCGGACAGTaGAGAGACAGGAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGEMCGQ*RDRKPC
Trigger: ACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTC...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTAGAAATGTGCGGACAGTaGAGAGACAGGAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLEMCGQ*RDRKPC
Trigger: ACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTC...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCTAGAGTTTGAGAACTaGATACTTGTGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: FAAGTELLAASQKGADAQLEFEN*ILVGVH
Trigger: ATGCACACCCACAAGTATTCAGTTCTCAAACTCTAG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTCCAGATTTCCCTTCATaGCCAGCCCTTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VPWHICRKLLRGSLVSALPDFPS*PALSLG
Trigger: CCCAAGAGAAAGGGCTGGTCATGAAGGGAAATCTGG...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp CAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAACTGCCTGTCTTCCCAGATTTCCCTTCATaGCCAGCCCTTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QIATSLSECQQEQKLPVFPDFPS*PALSLG
Trigger: CCCAAGAGAAAGGGCTGGTCATGAAGGGAAATCTGG...GAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAATCTTGTGTCTGCCCTTaGACCCACCTTAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: RVHLNLCSRHRASGCISESCVCP*THLSQI
Trigger: AATCTGGCTAAGGTGGGTTCAAGGGCAGACACAAGA...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTGCTTGTGAGACAGAATaGGCTCTTTCTTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGACETE*ALSSSM
Trigger: CATCGAGGAAGAAAGAGCTCATTCTGTCTCACAAGC...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518429.2
CDS-3UTR GCA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCAACATCAGATACTTCATaGAGCTCAGACAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: IFAAGTELLAASQKGADATSDTS*SSDSRL
Trigger: AAGGCGACTGTCTGAGCTGCATGAAGTATCTGATGT...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCTGGGCCATTCTTGGATaGCGTGTTAGCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSWAILG*RVSSSL
Trigger: GAGTGAGCTGCTAACACGGCATCCAAGAATGGCCCA...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGACAGGAAACCTTGTTaGAGCAGAAATGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMDRKPC*SRNGLD
Trigger: ATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTC...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCGGGCTGAGCTTTCTTTaGCTTGCCTCCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSGLSFL*LASKEW
Trigger: CCATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCC...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAAAAGGATCCTACCAGCTaGGCCATTCTTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: TDLRCHLWGCQSKLLKGEKDPTS*AILGCR
Trigger: ACGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTT...TTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCAGGTATGCAAGAGGGTaGAGAAGTCTTGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSRYARG*RSLGKD
Trigger: ATCCTTGCCAAGACTTCTCCACCCTCTTGCATACCT...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAACAGGCACAGAGCTTCTaGCTGCATCTCAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKQAQSF*LHLRRG
Trigger: CCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTG...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCCTTGCCTCCAAGGAATaGCCTCAGGCAGTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SLRTEYLWVCICESPCPSLASKE*PQAVLQ
Trigger: TTGCAAGACTGCCTGAGGCCATTCCTTGGAGGCAAG...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAACTGCCTGTCTTCCACCAGAACCTGCTGTaGGTTGTATCTGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: QIATSLSECQQEQKLPVFHQNLL*VVSGPS
Trigger: GCTTGGTCCAGATACAACCCACAGCAGGTTCTGGTG...GAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAAGGAAGTCTCTGTTATaGGCTGTTGTATTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQRKSLL*AVVFRG
Trigger: ACCCCGAAATACAACAGCCCATAACAGAGACTTCCT...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGACCTGACAGTAGCTTCTaGATACACTCTTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRPDSSF*IHSSSG
Trigger: GCCGCTGGAAGAGTGTATCCAGAAGCTACTGTCAGG...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520358.7
CDS-3UTR TCA 90 bp CCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTCTTGGCAAGGATGTTaGAGAAGATATCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLGLRSLASTDLRCHLWGSWQGC*RRYPSL
Trigger: GAGGCTTGGATATCTTCTTCAACATCCTTGCCAAGA...ACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CTGTTAAAGGGCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAACAAGGGAATGTGATGTaGACCTCTGTGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLKGEFGNTELRDLVGGQQGNVM*TSVCSW
Trigger: CCAGGAACACACAGAGGTGCACATCACATTCCCTTG...TTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGCCCTTTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTCCCAGAAGCCTGGGATaGCCCTGGATTAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLPRSLG*PWIRAI
Trigger: TATGGCTCTAATCCAGGGGCATCCCAGGCTTCTGGG...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAGAGCTTTCTTTGCCTTaGCTCCAAGGAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRELSLP*LQGMAS
Trigger: TGAGGCCATTCCTTGGAGGCAAGGCAAAGAAAGCTC...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTGCCACCACCAGAACCTaGTGTGGGTTGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLATTRT*CGLYLD
Trigger: GTCCAGATACAACCCACAGCAGGTTCTGGTGGTGGC...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACCTTGGCATCAGGTCCTaGTGCAGTGAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNLGIRS*CSEERG
Trigger: CCCTCTCTCCTCACTGCACCAGGACCTGATGCCAAG...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACGGCAGGAGGCTGCCTTaGGAGGTAGTAAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNGRRLP*EVVSSL
Trigger: CAGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCC...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAGCAAGTGGGATGCCATaGACAGAGCCACAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRASGMP*TEPQKN
Trigger: GTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGC...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGAGAACTGAATACTTGTaGGTGTGCATCTGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWRTEYL*VCICES
Trigger: AGACTCGCAGATGCACACCCACAAGTATTCAGTTCT...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp ACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAAGATACAGGATGCCGGTaGCTTGTGAGACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: TDLRCHLWGCQSKLLKGEDTGCR*LVRQNE
Trigger: CTCATTCTGTCTCACAAGCCACCGGCATCCTGTATC...TTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGTTCAGAGCAGGAAAGTaGCTTTCGATACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVFRAGK*LSIQAG
Trigger: CCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTGAA...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACAGTTCCTGGCTGACTTaGCCTCTCTTGTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNSSWLT*PLLSGG
Trigger: TCCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACT...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp CTGTTAAAGGGCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGACAGGAAACCTTGTTaGAGCAGAAATGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LLKGEFGNTELRDLVGGQDRKPC*SRNGLD
Trigger: ATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTC...TTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGCCCTTTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAGAAGCTGATACAGGATaGCGGTGGCTTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLEADTG*RWLVRQ
Trigger: CTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTC...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGATCCTACCAGCTaGGCCATTCTTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLKDPTS*AILGCR
Trigger: ACGGCATCCAAGAATGGCCCAGCTGGTAGGATCCTT...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGCAAACTTACGGTGCCTaGCAGACATCACTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKQTYGA*QTSLIR
Trigger: CCTGATGAGTGATGTCTGCCAGGCACCGTAAGTTTG...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGCTCAGGTGTCATTTATaGGGTTGCCAGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKLRCHL*GCQSKL
Trigger: CAGCTTGCTCTGGCAACCCCATAAATGACACCTGAG...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
3UTR CAA 72 bp GGTATGCAAGAGGGTGGAGAAGTCTTGGCAAGGATGTaGAAGAAGATATCCAAGCCTCAGTTCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GMQEGGEVLARM*KKISKPQFWVW
Trigger: CCACACCCAGAACTGAGGCTTGGATATCTTCTTCAACATCCTTGCCAAGACTTCTCCACCCTCTTGCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
3UTR CAA 72 bp AGAAATGTGCGGACAGTGAAGAGACAGGAAACCTTGTaGCAGCAGAAATGGCCTCGATGCCTTCGGGATTCT +
Preference number: 4 (lower is better)
Translates to: RNVRTVKRQETL*QQKWPRCLRDS
Trigger: AGAATCCCGAAGGCATCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTCTCTTCACTGTCCGCACATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGCCTGATTTGGGCTaGGCTTTCTTTGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLKPDLG*AFFALP
Trigger: AGGCAAGGCAAAGAAAGCTCAGCCCAAATCAGGCTT...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGTCCACCTGAATCTTTaGAGCAGGCACAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKVHLNL*SRHRAS
Trigger: AGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGAC...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAATTCACAAAAACCAGTaGAAAACCATCAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVHLNLCSRHRASGCISEIHKNQ*KTISVG
Trigger: GCCCACACTGATGGTTTTGCACTGGTTTTTGTGAAT...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp CTGTTAAAGGGCGAATTTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAAGAACTGAATACTTGTaGGTGTGCATCTGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLKGEFGNTELRDLVGGQRTEYL*VCICES
Trigger: AGACTCGCAGATGCACACCCACAAGTATTCAGTTCT...TTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAAATTCGCCCTTTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACGCTGTGGGTTGTATCTaGACCAAGCCAGCTAAACCC +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNAVGCI*TKPAKP
Trigger: GGGTTTAGCTGGCTTGGTCCAGATACAACCCACAGC...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACCTCTTTCTTCCTCGATaGCCAGTACCCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNLFLPR*PVPRWQ
Trigger: TTGCCATCGGGGTACTGGCCATCGAGGAAGAAAGAG...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518429.2
CDS-3UTR TCA 90 bp TGTTGCCTAAATCCTCACTTTCTTGGCATCAGGTCCTGGTGCAGTGAGGAGAGATCTTGGCAAGGATGTTaGAGAAGATATCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CCLNPHFLGIRSWCSEERSWQGC*RRYPSL
Trigger: GAGGCTTGGATATCTTCTTCAACATCCTTGCCAAGA...TCTCTCCTCACTGCACCAGGACCTGATGCCAAGAAAGTGAGGATTTAGGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR TCA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGACTAGAGTTTGAGAACTaGATACTTGTGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRLEFEN*ILVGVH
Trigger: ATGCACACCCACAAGTATTCAGTTCTCAAACTCTAG...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp GCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGACATCAGATACTTCATaGAGCTCAGACAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ASTDLRCHLWGCQSKLLKTSDTS*SSDSRL
Trigger: AAGGCGACTGTCTGAGCTGCATGAAGTATCTGATGT...CTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR GCA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACCTCAGACCAGCCATTTaGCTCTTCCAAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNLRPAI*LFQKAG
Trigger: CCCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAG...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTGCCTTTGAGATTATTTaGTCCAACAGATGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSAFEII*SNRWGK
Trigger: CTTTCCCCATCTGTTGGACCAAATAATCTCAAAGGC...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCGCAAAACCATCAGTGTaGGCGTCCTGTTTTATATTA +
Preference number: 4 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFAKPSV*ASCFIL
Trigger: TAATATAAAACAGGACGCCCACACTGATGGTTTTGC...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR GCA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAACATCAGATACTTCATaGAGCTCAGACAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLTSDTS*SSDSRL
Trigger: AAGGCGACTGTCTGAGCTGCATGAAGTATCTGATGT...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CCA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAATTTGGTCCAACAGATaGGGAAAGCAAGGATCCTAC +
Preference number: 4 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKIWSNR*GKQGSY
Trigger: GTAGGATCCTTGCTTTCCCCATCTGTTGGACCAAAT...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CCA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTGCAAAACCATCAGTGTaGGCGTCCTGTTTTATATTA +
Preference number: 4 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLAKPSV*ASCFIL
Trigger: TAATATAAAACAGGACGCCCACACTGATGGTTTTGC...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS CCA 90 bp CCCAGGAGGCACTCCTCCCGGCTCAGCAGGACCCCGTCCCGACTTTaGGGTTCCCTCCGGCAGCAGGCCTCCGGCACCTCTTCACTATCC +
Preference number: 5 (lower is better)
Translates to: PRRHSSRLSRTPSRL*GSLRQQASGTSSLS
Trigger: GGATAGTGAAGAGGTGCCGGAGGCCTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTCCTGCTGAGCCGGGAGGAGTGCCTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000518429.2
ENST00000519051.5
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
ENST00000533080.5
CDS-3UTR CAA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGACCCCGTCCCGACTTaGGGGTTCCCTCCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYDPVPT*GFPPAA
Trigger: TGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTC...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp GCAAGGACTGGCGGGCACAGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTGGGCGCGCTCGCAACTaGCCCGGCGCCGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ARTGGHSRRRLEEGPPESGRARN*PGAGCL
Trigger: AAGGCAGCCGGCGCCGGGCAAGTTGCGAGCGCGCCC...AGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCTGTGCCCGCCAGTCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520358.7
CDS TCA 90 bp GAGGATTGGCAGCCACGATCTCCCGGAAGCCGGTGGGGTCCACCATaGCCCAGATGCCGATGGCCAGCAGGCAGGCCCCGCCCAGAAATA +
Preference number: 5 (lower is better)
Translates to: EDWQPRSPGSRWGPP*PRCRWPAGRPRPEI
Trigger: TATTTCTGGGCGGGGCCTGCCTGCTGGCCATCGGCATCTGGGTCATGGTGGACCCCACCGGCTTCCGGGAGATCGTGGCTGCCAATCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
ENST00000520837.5
ENST00000520999.6
ENST00000533202.5
ENST00000533786.5
CDS-3UTR CAA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGACCCCGTCCCGACTTaGGGGTTCCCTCCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SRHRASGCISEGGRRTGQDPVPT*GFPPAA
Trigger: TGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTC...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGACCCCGTCCCGACTTaGGGGTTCCCTCCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQDPVPT*GFPPAA
Trigger: TGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTC...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTCAGTTCCTGGCTGACTaGCCCTCTCTTGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLAQFLAD*PSLVWG
Trigger: CCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACTG...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGGGCCTCGGCTGGTTaGGGAAATCCTGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SRHRASGCISEGGRRTGQGASAG*GNPVRA
Trigger: GGCCCGGACAGGATTTCCCAAACCAGCCGAGGCCCC...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS CCA 90 bp TGGAGCAGCCCCAGGAGCATAGCAGGAGCCTGTTGCATGCTGTGGTaGCGGACGGGGGACGATGCTCACCACCTCTACCCAGTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WSSPRSIAGACCMLW*RTGDDAHHLYPVLG
Trigger: GCCCAAGACTGGGTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCTCCTGCTATGCTCCTGGGGCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS-3UTR CAA 90 bp ACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGGAGCCAGTGGACCAGGGATaGCGCTGTGGGTTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: TLSSETWWEGKDWRAQQEPVDQG*RCGFRV
Trigger: GACTCGGAACCCACAGCGCAATCCCTGGTCCACTGG...CTCCTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS CCA 90 bp GACTGGAGCAGCCCCAGGAGCATAGCAGGAGCCTGTTGCATGCTGTaGTGGCGGACGGGGGACGATGCTCACCACCTCTACCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: DWSSPRSIAGACCML*WRTGDDAHHLYPVL
Trigger: CAAGACTGGGTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCTCCTGCTATGCTCCTGGGGCTGCTCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS-3UTR CAA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACCTGGTGTCTTTCCCTTaGGGCCCAGAGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYLVSFP*GPEVPR
Trigger: CCTTGGCACCTCTGGGCCCAAAGGGAAAGACACCAG...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCGACCAGCCCTTTCTCTaGGGTCCTCCCTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGDQPFL*GPPSDF
Trigger: GAAGTCAGAGGGAGGACCCAAGAGAAAGGGCTGGTC...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS GCA 90 bp AGGGGGTGCAGGGCAGGAGACCCAGAAACAGCGACTTGGCAGCATTaGACCAAAGACCCTCTTTGCCACCCGGCCCCTAAGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: RGCRAGDPETATWQH*TKDPLCHPAPKVGQ
Trigger: CTGTCCCACCTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGTTTCTGGGTCTCCTGCCCTGCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS-3UTR CAA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACCTGGTGTCTTTCCCTTaGGGCCCAGAGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNLVSFP*GPEVPR
Trigger: CCTTGGCACCTCTGGGCCCAAAGGGAAAGACACCAG...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCACTGACTTGCCCTCTCTaGTCTGGGGGAACCGGGATG +
Preference number: 5 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPLTCPL*SGGTGM
Trigger: CATCCCGGTTCCCCCAGACAAGAGAGGGCAAGTCAG...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTGGATTTCTTCCACTCTaGGAGCTGGGGAGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASGFLPL*ELGSWG
Trigger: TCCCCAACTCCCCAGCTCCAAGAGTGGAAGAAATCC...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACAGGCAGGAGGCTGCCTaGGGAGGTAGTAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYRQEAA*GGSKLS
Trigger: AGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCCT...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTGGTCCACCTGAATCTTaGCAGCAGGCACAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASGPPES*QQAQSF
Trigger: GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACC...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAATAGCAGCAGACACTaGTTCTCACGGACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRHRASGCISEGGRRTGQNSSRH*FSRTAP
Trigger: CGGGGCCGTCCGTGAGAACAAGTGTCTGCTGCTATT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTTGCTTGGTGAGCTCCTaGGTGAAGAATTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASCLVSS*VKNSRV
Trigger: CACCCGAGAATTCTTCACCAAGGAGCTCACCAAGCA...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCCAGTGGACCAGGGATaGCGCTGTGGGTTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: FAAGTELLAASQKGADAQPVDQG*RCGFRV
Trigger: GACTCGGAACCCACAGCGCAATCCCTGGTCCACTGG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCCCTCAGACCAGCCATTaGCCTCTTCCAAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGPQTSH*PLPKSW
Trigger: CCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAGG...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS GCA 90 bp CATAGCAGGAGCCTGTTGCATGCTGTGGTGGCGGACGGGGGACGATaGTCACCACCTCTACCCAGTCTTGGGCCTCAGCAGACAAATGCT +
Preference number: 5 (lower is better)
Translates to: HSRSLLHAVVADGGR*SPPLPSLGPQQTNA
Trigger: AGCATTTGTCTGCTGAGGCCCAAGACTGGGTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCTCCTGCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS CCA 90 bp AGAGGTGCCAAGGTTCTCTTACAGTGTCCTCCTGACAGTAGCTTCTaGATACACTCTCCGCCCCTCCCGGCTCCAGACGCCGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RGAKVLLQCPPDSSF*IHSPPLPAPDAVAA
Trigger: GGCAGCAACGGCGTCTGGAGCCGGGAGGGGCGGAGAGTGTATCCAGAAGCTACTGTCAGGAGGACACTGTAAGAGAACCTTGGCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533202.5
CDS-3UTR CAA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAGTGAGGAGCAGAGGATaGGCAGCCACGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQVRSRG*AATISR
Trigger: CCGGGAGATCGTGGCTGCCAATCCTCTGCTCCTCAC...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACACGGGGCAGACAGGAAACCTTGTaGCAGCAGAAATGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: ASGCISEGGRRTGQGTRGRQETL*QQKWPR
Trigger: TCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTCT...GCCCCGTGTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGGTCCACCTGAATCTTaGCAGCAGGCACAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNGPPES*QQAQSF
Trigger: GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp GTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGCAGTGGCCTCAGGCAGTCTaGCAAATAGCTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: VTLSSETWWEGKDWRAQQWPQAV*QIATSL
Trigger: CAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGCCA...CTGCTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS GCA 90 bp GACCCAGAAACAGCGACTTGGCAGCATTGCACCAAAGACCCTCTTTaGCACCCGGCCCCTAAGGTGGGACAGAGAACTGACAGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: DPETATWQHCTKDPL*HPAPKVGQRTDSVQ
Trigger: CTGCACGCTGTCAGTTCTCTGTCCCACCTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGTTTCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS GCA 90 bp TGTGAGCCCAGAGGGCAGGCAGGGGATGGGGCGGCCACTGGCCAATaGATCCGTCCATCTGTCACACCAGTGACGCAGTATACTCATTTT +
Preference number: 5 (lower is better)
Translates to: CEPRGQAGDGAATGQ*IRPSVTPVTQYTHF
Trigger: AAAATGAGTATACTGCGTCACTGGTGTGACAGATGGACGGATGCATTGGCCAGTGGCCGCCCCATCCCCTGCCTGCCCTCTGGGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS-3UTR CAA 90 bp CCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTGCATCCTGGGCCAGTaGCTGGGGTCTCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PPGSQELSFYGPQVSFMGCILGQ*LGSLEN
Trigger: GTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCA...CCCCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACTGCAGCCCCTGGGCTTaGATGACTTCTCTGAGATTT +
Preference number: 5 (lower is better)
Translates to: WAAVPVAGPPGSQELSFYCSPWA*MTSLRF
Trigger: AAATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCA...GTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTGTCCTCTCTGGGCCTTaGAGATTATTTGGTCCAACA +
Preference number: 5 (lower is better)
Translates to: AGPRYQWQVPLGLRSLASVLSGP*RLFGPT
Trigger: TGTTGGACCAAATAATCTCAAAGGCCCAGAGAGGAC...AGAAGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGGCTGGGCCGCGGTACCAGTGGCAGGTCCCCCTGGGTCTCAGGAGCTTAGCTGTGTCATTTATGGGGTaGCCAGAGCAAGCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: QAGPRYQWQVPLGLRSLAVSFMG*PEQAVK
Trigger: TTTAACAGCTTGCTCTGGCAACCCCATAAATGACAC...AGCTAAGCTCCTGAGACCCAGGGGGACCTGCCACTGGTACCGCGGCCCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGTGGGCTGAGCTTTCTTaGCCTTGCCTCCAAGGAATG +
Preference number: 5 (lower is better)
Translates to: SRHRASGCISEGGRRTGQWAELS*PCLQGM
Trigger: CATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCA...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS GCA 90 bp TGGGTGGGGCGAGTCTTCAGGCTTCAGGCCATACCCTCTACTGGATaGCCCGGAAGAGGCACATGGCAAAGATCATGGCGAAAAGCTCGA +
Preference number: 5 (lower is better)
Translates to: WVGRVFRLQAIPSTG*PGRGTWQRSWRKAR
Trigger: TCGAGCTTTTCGCCATGATCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGCCTGAAGCCTGAAGACTCGCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000520245.5
ENST00000520278.1
ENST00000520358.7
ENST00000521990.1
CDS CCA 90 bp CAGAGAAGGACATACAGCCTCTGCAAAGGAGTGGCATCAGAAGACTaGGTGTGGGCGGGCTCCACCTGTCACCACTGTGTGACCATGGGA +
Preference number: 5 (lower is better)
Translates to: QRRTYSLCKGVASED*VWAGSTCHHCVTMG
Trigger: TCCCATGGTCACACAGTGGTGACAGGTGGAGCCCGCCCACACCCAGTCTTCTGATGCCACTCCTTTGCAGAGGCTGTATGTCCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517621.5
CDS TCA 90 bp AGCCTGAGGGGAGGCTGGAAGCTGATACAGGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTCTTCCTCGATGGCCAGTACCCCGAT +
Preference number: 5 (lower is better)
Translates to: SLRGGWKLIQDAGGL*DRMSSFFLDGQYPD
Trigger: ATCGGGGTACTGGCCATCGAGGAAGAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTCCAGCCTCCCCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518429.2
CDS CCA 90 bp GGCAGCATTGCACCAAAGACCCTCTTTGCCACCCGGCCCCTAAGGTaGGACAGAGAACTGACAGCGTGCAGGCCATGTCTAATGTTGCAA +
Preference number: 5 (lower is better)
Translates to: GSIAPKTLFATRPLR*DRELTACRPCLMLQ
Trigger: TTGCAACATTAGACATGGCCTGCACGCTGTCAGTTCTCTGTCCCACCTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CCA 90 bp GCCCCTCGTACAGTGTGCAACCTGAACAACCCTACTCAGCCACCCTaGAAGGAGATCGCTGATGAAACCCGTTTGAGCCCACTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: APRTVCNLNNPTQPP*KEIADETRLSPLWV
Trigger: TACCCAGAGTGGGCTCAAACGGGTTTCATCAGCGATCTCCTTCCAGGGTGGCTGAGTAGGGTTGTTCAGGTTGCACACTGTACGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS-3UTR CAA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCAATAGCAGCAGACACTaGTTCTCACGGACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSNSSRH*FSRTAP
Trigger: CGGGGCCGTCCGTGAGAACAAGTGTCTGCTGCTATT...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp AACAGTCCATCCTCCAGTGGACCAGGGATTGCGCTGTGGGTTCCGAGTCCTCAAAAGTCTTCAGGCCCGTaGACCCCGCAGCAACCAAAT +
Preference number: 5 (lower is better)
Translates to: NSPSSSGPGIALWVPSPQKSSGP*TPQQPN
Trigger: ATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACTT...TTGAGGACTCGGAACCCACAGCGCAATCCCTGGTCCACTGGAGGATGGACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGCCAGCTGGGCCATTCTaGGATGCCGTGTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWPAGPF*DAVLAA
Trigger: AGCTGCTAACACGGCATCCAAGAATGGCCCAGCTGG...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCCTGACTTGCCCTCTCTaGTCTGGGGGAACCGGGATG +
Preference number: 5 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFLTCPL*SGGTGM
Trigger: CATCCCGGTTCCCCCAGACAAGAGAGGGCAAGTCAG...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGAGGCAGGAGGCTGCCTaGGGAGGTAGTAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RCLRDSLAWREEGSGESMRQEAA*GGSKLS
Trigger: AGAGAGCTTACTACCTCCCAAGGCAGCCTCCTGCCT...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGAAGAGACAGGAAACCTaGTTGCAGCAGAAATGGCCT +
Preference number: 5 (lower is better)
Translates to: SRHRASGCISEGGRRTGQKRQET*LQQKWP
Trigger: AGGCCATTTCTGCTGCAACAAGGTTTCCTGTCTCTT...CTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCATTGAGAACTGAATACTaGTGGGTGTGCATCTGCGAG +
Preference number: 5 (lower is better)
Translates to: QQAQSFWLHLRRGQTHRPLRTEY*WVCICE
Trigger: CTCGCAGATGCACACCCACAAGTATTCAGTTCTCAA...TGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCAGGGTAGGAGCATCTaGCAATCCAGTTGCCAACAC +
Preference number: 5 (lower is better)
Translates to: FAAGTELLAASQKGADAQQGRSI*QSSCQH
Trigger: GTGTTGGCAACTGGATTGCAAGATGCTCCTACCCTG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGCCTCAGACCAGCCATTaGCCTCTTCCAAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FAAGTELLAASQKGADAQPQTSH*PLPKSW
Trigger: CCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAGG...CTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTAGACCAGCCCTTTCTCTaGGGTCCTCCCTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: QVPLGLRSLASTDLRCHLDQPFL*GPPSDF
Trigger: GAAGTCAGAGGGAGGACCCAAGAGAAAGGGCTGGTC...TAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGGCCTCGGCTGGTTaGGGAAATCCTGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKGASAG*GNPVRA
Trigger: GGCCCGGACAGGATTTCCCAAACCAGCCGAGGCCCC...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS TCA 90 bp CGATGGCAAGGGCTCCGGCCAAGTAGACGTAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGCCCTGCTTGTTTAGGAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: RWQGLRPSRRRSRRC*GSPCNSPACLGIGS
Trigger: GGAGCCTATTCCTAAACAAGCAGGGCTGTTACACGGTGATCCTCAACACCTTCGAGACCTACGTCTACTTGGCCGGAGCCCTTGCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
CDS-3UTR CAA 90 bp CAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAGAAACTGCCTGTCTTCTGCATCCTGGGCCAGTaGCTGGGGTCTCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: QIATSLSECQQEQKLPVFCILGQ*LGSLEN
Trigger: GTTCTCCAGAGACCCCAGCAACTGGCCCAGGATGCA...GAAGACAGGCAGTTTCTGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCAGTTCCTGGCTGACTaGCCCTCTCTTGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSQFLAD*PSLVWG
Trigger: CCCCCAGACAAGAGAGGGCAAGTCAGCCAGGAACTG...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TTGGTAACACTGAGCTCAGAGACCTGGTGGGAGGGCAAGGACTGGCGGGCACAGAAGAGACAGGAAACCTaGTTGCAGCAGAAATGGCCT +
Preference number: 5 (lower is better)
Translates to: LVTLSSETWWEGKDWRAQKRQET*LQQKWP
Trigger: AGGCCATTTCTGCTGCAACAAGGTTTCCTGTCTCTT...CTGTGCCCGCCAGTCCTTGCCCTCCCACCAGGTCTCTGAGCTCAGTGTTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACAGGCCAGGGAACGTGTCATTTATGGGGTaGCCAGAGCAAGCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: AQSFWLHLRRGQTHRPGNVSFMG*PEQAVK
Trigger: TTTAACAGCTTGCTCTGGCAACCCCATAAATGACAC...GTTCCCTGGCCTGTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCAAGAACCTGCTGTGGGTaGTATCTGGACCAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: ASGSLANSYQPERMPTGARTCCG*YLDQAS
Trigger: GCTGGCTTGGTCCAGATACAACCCACAGCAGGTTCT...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS CCA 90 bp CCACCCTGGAAGGAGATCGCTGATGAAACCCGTTTGAGCCCACTCTaGGTAAATTTCCTTCTGGGTAGGTTGTACGGGCTGCGAGAATCC +
Preference number: 5 (lower is better)
Translates to: PPWKEIADETRLSPL*VNFLLGRLYGLRES
Trigger: GGATTCTCGCAGCCCGTACAACCTACCCAGAAGGAAATTTACCCAGAGTGGGCTCAAACGGGTTTCATCAGCGATCTCCTTCCAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS-3UTR CAA 90 bp AGCAGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCCCTGGAGAGCCAGCGTaGAGATGTCTGCAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: SRRRLEEGPPESLQQAQSPGEPA*RCLQKD
Trigger: ATCCTTTTGCAGACATCTCAACGCTGGCTCTCCAGG...GCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GCCTCAGGCAGTCTTGCAAATAGCTACCAGCCTGAGCGAATGCCAACAGGAGCATGCTTGGTGAGCTCCTaGGTGAAGAATTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: ASGSLANSYQPERMPTGACLVSS*VKNSRV
Trigger: CACCCGAGAATTCTTCACCAAGGAGCTCACCAAGCA...TGCTCCTGTTGGCATTCGCTCAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp ATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCATGCAGCCCCTGGGCTTaGATGACTTCTCTGAGATTT +
Preference number: 5 (lower is better)
Translates to: IFAAGTELLAASQKGADACSPWA*MTSLRF
Trigger: AAATCTCAGAGAAGTCATCAAAGCCCAGGGGCTGCA...TGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGACCAGCTGGGCCATTCTaGGATGCCGTGTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: YGPQVSFMGLPEQAVKGRPAGPF*DAVLAA
Trigger: AGCTGCTAACACGGCATCCAAGAATGGCCCAGCTGG...TCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS TCA 90 bp GGGGTTCCAGTTGCTTTGATGGTAGTGTTAGAAGCTCAGCTCACCTaGAGCTTGAGGGTGGTCCAGGAGATGCTCACCCTCTTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GVPVALMVVLEAQLT*SLRVVQEMLTLFCS
Trigger: GCTACAGAAGAGGGTGAGCATCTCCTGGACCACCCTCAAGCTTCAGGTGAGCTGAGCTTCTAACACTACCATCAAAGCAACTGGAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS-3UTR CAA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGCTTGGTGAGCTCCTaGGTGAAGAATTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFCLVSS*VKNSRV
Trigger: CACCCGAGAATTCTTCACCAAGGAGCTCACCAAGCA...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTAAGTCTTCAGGCCCGTaGACCCCGCAGCAACCAAAT +
Preference number: 5 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSKSSGP*TPQQPN
Trigger: ATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACTT...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGTTTGAGAACTGAATACTTGTGGGTGTGCATCTGCGAGTCTCCCTGCCCAAGCTGGCCTCAGGCAGTCTaGCAAATAGCTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SLRTEYLWVCICESPCPSWPQAV*QIATSL
Trigger: CAGGCTGGTAGCTATTTGCAAGACTGCCTGAGGCCA...GCTTGGGCAGGGAGACTCGCAGATGCACACCCACAAGTATTCAGTTCTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGAGAACCTGCTGTGGGTaGTATCTGGACCAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVRTCCG*YLDQAS
Trigger: GCTGGCTTGGTCCAGATACAACCCACAGCAGGTTCT...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACCTCTGTTATGGGCTGTaGTATTTCGGGGTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: SLQQAQSFWLHLRRGQTHLCYGL*YFGVKR
Trigger: TCTTTTCACCCCGAAATACAACAGCCCATAACAGAG...GTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GGTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGAGCGGTGTAGTCTTCTaGTTCCTTGCCCTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: GPPGSQELSFYGPQVSFMSGVVF*FLALLV
Trigger: CACTAACAGGGCAAGGAACAAGAAGACTACACCGCT...CATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTCCTGGAGAGCCAGCGTaGAGATGTCTGCAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: VPWHICRKLLRGSLVSALPGEPA*RCLQKD
Trigger: ATCCTTTTGCAGACATCTCAACGCTGGCTCTCCAGG...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAAGGGGGCAGACGCACTTTGCTTTTGCCTCCTaGTTGCCTAAATCCTCACTT +
Preference number: 5 (lower is better)
Translates to: SLQQAQSFWLHLRRGQTHFAFAS*LPKSSL
Trigger: AAGTGAGGATTTAGGCAACAAGGAGGCAAAAGCAAA...GTGCGTCTGCCCCCTTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GGGCAAGTGGGATGCCATGGACAGAGCCACAGAAAAACAGAAACCTCTTCTGTGCAGGGTAGGAGCATCTaGCAATCCAGTTGCCAACAC +
Preference number: 5 (lower is better)
Translates to: GQVGCHGQSHRKTETSSVQGRSI*QSSCQH
Trigger: GTGTTGGCAACTGGATTGCAAGATGCTCCTACCCTG...CACAGAAGAGGTTTCTGTTTTTCTGTGGCTCTGTCCATGGCATCCCACTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp CAGAGCAGGAAAGTGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCCTCAGACCAGCCATTaGCCTCTTCCAAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: QSRKVAFDTGRVCDERCSPQTSH*PLPKSW
Trigger: CCAGCTTTTTGGAAGAGGCAAATGGCTGGTCTGAGG...ACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCACTTTCCTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGGAGGAGATTAGAGGAGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCAGCGGTGTAGTCTTCTaGTTCCTTGCCCTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: RRRLEEGPPESLQQAQSFSGVVF*FLALLV
Trigger: CACTAACAGGGCAAGGAACAAGAAGACTACACCGCT...GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCTCCTCTAATCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS GCA 90 bp CGGCCCAGCTGGAGAGCCAGCGTTGAGATGTCTGCAAAAGGATTATaGTCGCGTCTCCAGAAATCAAATTCAAGGGGTTCCAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RPSWRASVEMSAKGL*SRLQKSNSRGSSCF
Trigger: AAAGCAACTGGAACCCCTTGAATTTGATTTCTGGAGACGCGAGCATAATCCTTTTGCAGACATCTCAACGCTGGCTCTCCAGCTGGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520837.5
ENST00000520999.6
CDS-3UTR CAA 90 bp CGATGCCTTCGGGATTCTTTAGCCTGGAGAGAAGAGGGCTCAGGGGAGTCAATGGCTTTTGCCTCCTTGTaGCCTAAATCCTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: RCLRDSLAWREEGSGESMAFASL*PKSSLS
Trigger: AGAAAGTGAGGATTTAGGCAACAAGGAGGCAAAAGC...CATTGACTCCCCTGAGCCCTCTTCTCTCCAGGCTAAAGAATCCCGAAGGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GTCCCCCTGGGTCTCAGGAGCTTAGCTTCTACGGACCTCAGGTGTCATTTATGGGCTTTTGCCTCCTTGTaGCCTAAATCCTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: VPLGLRSLASTDLRCHLWAFASL*PKSSLS
Trigger: AGAAAGTGAGGATTTAGGCAACAAGGAGGCAAAAGC...CCATAAATGACACCTGAGGTCCGTAGAAGCTAAGCTCCTGAGACCCAGGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GTAGGAGCGAGGGCGCGGTGGGAAGTCATGGAATGGTGTTTTCTTAGCTGTAGAGTCCTCTCTGGGCCTTaGAGATTATTTGGTCCAACA +
Preference number: 5 (lower is better)
Translates to: VGARARWEVMEWCFLSCRVLSGP*RLFGPT
Trigger: TGTTGGACCAAATAATCTCAAAGGCCCAGAGAGGAC...TCTACAGCTAAGAAAACACCATTCCATGACTTCCCACCGCGCCCTCGCTCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGATTTCTTCCACTCTaGGAGCTGGGGAGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SFYGPQVSFMGLPEQAVKGFLPL*ELGSWG
Trigger: TCCCCAACTCCCCAGCTCCAAGAGTGGAAGAAATCC...TTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp GTTCCTTGGCACATTTGTAGAAAGCTGCTGAGGGGCAGTCTTGTGTCTGCCCTTAGACAGGAAACCTTGTaGCAGCAGAAATGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: VPWHICRKLLRGSLVSALRQETL*QQKWPR
Trigger: TCGAGGCCATTTCTGCTGCAACAAGGTTTCCTGTCT...AAGGGCAGACACAAGACTGCCCCTCAGCAGCTTTCTACAAATGTGCCAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TTAGCTTCTACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAGGTCCACCTGAATCTTaGCAGCAGGCACAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LASTDLRCHLWGCQSKLLGPPES*QQAQSF
Trigger: GAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACC...TAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGTAGAAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACAAGTCTTCAGGCCCGTaGACCCCGCAGCAACCAAAT +
Preference number: 5 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNKSSGP*TPQQPN
Trigger: ATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACTT...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS-3UTR CAA 90 bp ACGGACCTCAGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTGAGAACTGAATACTaGTGGGTGTGCATCTGCGAG +
Preference number: 5 (lower is better)
Translates to: TDLRCHLWGCQSKLLKGELRTEY*WVCICE
Trigger: CTCGCAGATGCACACCCACAAGTATTCAGTTCTCAA...TTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCTGAGGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp TGGCTTTCGATACAGGCAGGGTTTGTGATGAGCGGTGTAGTCTTCTTGTTCCTTTGGGCTGAGCTTTCTTaGCCTTGCCTCCAAGGAATG +
Preference number: 5 (lower is better)
Translates to: WLSIQAGFVMSGVVFLFLWAELS*PCLQGM
Trigger: CATTCCTTGGAGGCAAGGCAAAGAAAGCTCAGCCCA...AAGGAACAAGAAGACTACACCGCTCATCACAAACCCTGCCTGTATCGAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS-3UTR CAA 90 bp AGGGTCCACCTGAATCTTTGCAGCAGGCACAGAGCTTCTGGCTGCATCTCAGAACTCTGTTATGGGCTGTaGTATTTCGGGGTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: RVHLNLCSRHRASGCISELCYGL*YFGVKR
Trigger: TCTTTTCACCCCGAAATACAACAGCCCATAACAGAG...TTCTGAGATGCAGCCAGAAGCTCTGTGCCTGCTGCAAAGATTCAGGTGGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340160.7
ENST00000520358.7
CDS GCA 90 bp TGCTCCACCTGGAGAGCCAGCGTTGAGATGTCTGCAAAAGGATTATaGTCGCGTCTCCAGAAATCAAATTCAAGGGGTTCCAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: CSTWRASVEMSAKGL*SRLQKSNSRGSSCF
Trigger: AAAGCAACTGGAACCCCTTGAATTTGATTTCTGGAGACGCGAGCATAATCCTTTTGCAGACATCTCAACGCTGGCTCTCCAGGTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340160.7
ENST00000520358.7
ENST00000533080.5
ENST00000533202.5
ENST00000533786.5
CDS GCA 90 bp GGATTATGCTCGCGTCTCCAGAAATCAAATTCAAGGGGTTCCAGTTaGTTTGATGGTAGTGTTAGAAGCTCAGCTCACCTGAAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: GLCSRLQKSNSRGSS*FDGSVRSSAHLKLE
Trigger: CTCAAGCTTCAGGTGAGCTGAGCTTCTAACACTACCATCAAAGCAACTGGAACCCCTTGAATTTGATTTCTGGAGACGCGAGCATAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340160.7
ENST00000520358.7
ENST00000520837.5
ENST00000520999.6
ENST00000533080.5
ENST00000533202.5
ENST00000533786.5
CDS-3UTR CAA 90 bp AGGTGTCATTTATGGGGTTGCCAGAGCAAGCTGTTAAAGGGCGAATTTGGTAACGTGTCATTTATGGGGTaGCCAGAGCAAGCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: RCHLWGCQSKLLKGEFGNVSFMG*PEQAVK
Trigger: TTTAACAGCTTGCTCTGGCAACCCCATAAATGACAC...GTTACCAAATTCGCCCTTTAACAGCTTGCTCTGGCAACCCCATAAATGACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520358.7
CDS GCA 72 bp GGAAACTTTCCTGGTCGGAGGGGCGCGCTCGCAACTTaGCCGGCGCCGGCTGCCTTCCCGGCGGTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: GNFPGRRGALAT*PAPAAFPAVAA
Trigger: CGCCGCCACCGCCGGGAAGGCAGCCGGCGCCGGGCAAGTTGCGAGCGCGCCCCTCCGACCAGGAAAGTTTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520358.7
ENST00000533080.5
CDS GCA 72 bp ACACTCTCCGCCCCTCCCGGCTCCAGACGCCGTTGCTaGCGAGAAGCGCGTCTCCTCTGCGGGCTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: TLSAPPGSRRRC*REARLLCGLPL
Trigger: GAGGGGCAGCCCGCAGAGGAGACGCGCTTCTCGGCAGCAACGGCGTCTGGAGCCGGGAGGGGCGGAGAGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533202.5
CDS CAA 72 bp GCACTCCTCCCGGCTCAGCAGGACCCCGTCCCGACTTaGGGGTTCCCTCCGGCAGCAGGCCTCCGGCACCTC +
Preference number: 6 (lower is better)
Translates to: ALLPAQQDPVPT*GFPPAAGLRHL
Trigger: GAGGTGCCGGAGGCCTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTCCTGCTGAGCCGGGAGGAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000518429.2
ENST00000519051.5
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
ENST00000533080.5
CDS TCA 72 bp CAGCCACGATCTCCCGGAAGCCGGTGGGGTCCACCATaGCCCAGATGCCGATGGCCAGCAGGCAGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: QPRSPGSRWGPP*PRCRWPAGRPR
Trigger: GCGGGGCCTGCCTGCTGGCCATCGGCATCTGGGTCATGGTGGACCCCACCGGCTTCCGGGAGATCGTGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000519051.5
ENST00000520358.7
ENST00000520837.5
ENST00000520999.6
ENST00000533202.5
ENST00000533786.5
CDS GCA 72 bp GACAGTAGCTTCTGGATACACTCTTCCAGCGGCGGCTaGCGGACCCCGCGCCAAATCCCGCCGGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: DSSFWIHSSSGG*RTPRQIPPAAG
Trigger: CCCGGCCGCCGGCGGGATTTGGCGCGGGGTCCGGCAGCCGCCGCTGGAAGAGTGTATCCAGAAGCTACTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520358.7
ENST00000520999.6
ENST00000533080.5
CDS GCA 72 bp GATACACTCTCCGCCCCTCCCGGCTCCAGACGCCGTTaGTGCCGAGAAGCGCGTCTCCTCTGCGGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: DTLSAPPGSRRR*CREARLLCGLP
Trigger: GGGCAGCCCGCAGAGGAGACGCGCTTCTCGGCAGCAACGGCGTCTGGAGCCGGGAGGGGCGGAGAGTGTATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533202.5
CDS CCA 72 bp CACTCCTCCCGGCTCAGCAGGACCCCGTCCCGACTTTaGGGTTCCCTCCGGCAGCAGGCCTCCGGCACCTCT +
Preference number: 6 (lower is better)
Translates to: HSSRLSRTPSRL*GSLRQQASGTS
Trigger: AGAGGTGCCGGAGGCCTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTCCTGCTGAGCCGGGAGGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000518429.2
ENST00000519051.5
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
ENST00000533080.5
CDS CAA 72 bp GGATACACTCTCCGCCCCTCCCGGCTCCAGACGCCGTaGCTGCCGAGAAGCGCGTCTCCTCTGCGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GYTLRPSRLQTP*LPRSASPLRAA
Trigger: GGCAGCCCGCAGAGGAGACGCGCTTCTCGGCAGCAACGGCGTCTGGAGCCGGGAGGGGCGGAGAGTGTATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533202.5
CDS CAA 90 bp TCCCAGGAGGCACTCCTCCCGGCTCAGCAGGACCCCGTCCCGACTTaGGGGTTCCCTCCGGCAGCAGGCCTCCGGCACCTCTTCACTATC +
Preference number: 6 (lower is better)
Translates to: SQEALLPAQQDPVPT*GFPPAAGLRHLFTI
Trigger: GATAGTGAAGAGGTGCCGGAGGCCTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTCCTGCTGAGCCGGGAGGAGTGCCTCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000518429.2
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
ENST00000533080.5
CDS GCA 72 bp AGCCTGTTGCATGCTGTGGTGGCGGACGGGGGACGATaGTCACCACCTCTACCCAGTCTTGGGCCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SLLHAVVADGGR*SPPLPSLGPQQ
Trigger: CTGCTGAGGCCCAAGACTGGGTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS CCA 72 bp CCCAGGAGCATAGCAGGAGCCTGTTGCATGCTGTGGTaGCGGACGGGGGACGATGCTCACCACCTCTACCCA +
Preference number: 6 (lower is better)
Translates to: PRSIAGACCMLW*RTGDDAHHLYP
Trigger: TGGGTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCTCCTGCTATGCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS CCA 72 bp AGCCCCAGGAGCATAGCAGGAGCCTGTTGCATGCTGTaGTGGCGGACGGGGGACGATGCTCACCACCTCTAC +
Preference number: 6 (lower is better)
Translates to: SPRSIAGACCML*WRTGDDAHHLY
Trigger: GTAGAGGTGGTGAGCATCGTCCCCCGTCCGCCACCACAGCATGCAACAGGCTCCTGCTATGCTCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS TCA 72 bp GGGCTCCGGCCAAGTAGACGTAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGCCCTGGGAGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GLRPSRRRSRRC*GSPCNSPGREG
Trigger: TCCCTCCCTCCCAGGGCTGTTACACGGTGATCCTCAACACCTTCGAGACCTACGTCTACTTGGCCGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CCA 72 bp AGGGGGTGCAGGGCAGGAGACCCAGAAACAGCGACTTaGCAGCATTGCACCAAAGACCCTCTTTGCCACCCG +
Preference number: 6 (lower is better)
Translates to: RGCRAGDPETAT*QHCTKDPLCHP
Trigger: CGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGTTTCTGGGTCTCCTGCCCTGCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CAA 72 bp GAGGGGGTGCAGGGCAGGAGACCCAGAAACAGCGACTaGGCAGCATTGCACCAAAGACCCTCTTTGCCACCC +
Preference number: 6 (lower is better)
Translates to: EGVQGRRPRNSD*AALHQRPSLPP
Trigger: GGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGTTTCTGGGTCTCCTGCCCTGCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS GCA 72 bp AGGGCAGGAGACCCAGAAACAGCGACTTGGCAGCATTaGACCAAAGACCCTCTTTGCCACCCGGCCCCTAAG +
Preference number: 6 (lower is better)
Translates to: RAGDPETATWQH*TKDPLCHPAPK
Trigger: CTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGTTTCTGGGTCTCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CCA 72 bp AGCCTCTGCAAAGGAGTGGCATCAGAAGACTGGGTGTaGGCGGGCTCCACCTGTCACCACTGTGTGACCATG +
Preference number: 6 (lower is better)
Translates to: SLCKGVASEDWV*AGSTCHHCVTM
Trigger: CATGGTCACACAGTGGTGACAGGTGGAGCCCGCCCACACCCAGTCTTCTGATGCCACTCCTTTGCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517621.5
CDS CCA 72 bp GCACCAAAGACCCTCTTTGCCACCCGGCCCCTAAGGTaGGACAGAGAACTGACAGCGTGCAGGCCATGTCTA +
Preference number: 6 (lower is better)
Translates to: APKTLFATRPLR*DRELTACRPCL
Trigger: TAGACATGGCCTGCACGCTGTCAGTTCTCTGTCCCACCTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS GCA 72 bp ACAGCGACTTGGCAGCATTGCACCAAAGACCCTCTTTaGCACCCGGCCCCTAAGGTGGGACAGAGAACTGAC +
Preference number: 6 (lower is better)
Translates to: TATWQHCTKDPL*HPAPKVGQRTD
Trigger: GTCAGTTCTCTGTCCCACCTTAGGGGCCGGGTGGCAAAGAGGGTCTTTGGTGCAATGCTGCCAAGTCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CCA 72 bp AGATCATGGCGAAAAGCTCGATGGCCAGTACCCCGATaGCAAGGGCTCCGGCCAAGTAGACGTAGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: RSWRKARWPVPR*QGLRPSRRRSR
Trigger: TCGAGACCTACGTCTACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCATCGAGCTTTTCGCCATGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000520245.5
ENST00000520278.1
ENST00000520358.7
ENST00000521990.1
CDS CCA 72 bp GGGGCGAGTCTTCAGGCTTCAGGCCATACCCTCTACTaGATGCCCCGGAAGAGGCACATGGCAAAGATCATG +
Preference number: 6 (lower is better)
Translates to: GASLQASGHTLY*MPRKRHMAKIM
Trigger: CATGATCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGCCTGAAGCCTGAAGACTCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000520245.5
ENST00000520278.1
ENST00000520358.7
ENST00000521990.1
CDS CCA 72 bp ACATACAGCCTCTGCAAAGGAGTGGCATCAGAAGACTaGGTGTGGGCGGGCTCCACCTGTCACCACTGTGTG +
Preference number: 6 (lower is better)
Translates to: TYSLCKGVASED*VWAGSTCHHCV
Trigger: CACACAGTGGTGACAGGTGGAGCCCGCCCACACCCAGTCTTCTGATGCCACTCCTTTGCAGAGGCTGTATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517621.5
ENST00000521990.1
CDS CCA 72 bp CCAGGGTTGAGAGTCCTGGAGTCAGAGTCCAGCATGTaGACTAGGGTTCATGGCAGGTGTCCCCAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: PGLRVLESESSM*TRVHGRCPQSS
Trigger: AGAGCTCTGGGGACACCTGCCATGAACCCTAGTCCACATGCTGGACTCTGACTCCAGGACTCTCAACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520278.1
CDS CCA 72 bp AAGGTTCTCTTACAGTGTCCTCCTGACAGTAGCTTCTaGATACACTCTCCGCCCCTCCCGGCTCCAGACGCC +
Preference number: 6 (lower is better)
Translates to: KVLLQCPPDSSF*IHSPPLPAPDA
Trigger: GGCGTCTGGAGCCGGGAGGGGCGGAGAGTGTATCCAGAAGCTACTGTCAGGAGGACACTGTAAGAGAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533202.5
CDS TCA 72 bp GTACCCTTAGAGAGGCCCCTCGTACAGTGTGCAACCTaGACAACCCTACTCAGCCACCCTGGAAGGAGATCG +
Preference number: 6 (lower is better)
Translates to: VPLERPLVQCAT*TTLLSHPGRRS
Trigger: CGATCTCCTTCCAGGGTGGCTGAGTAGGGTTGTTCAGGTTGCACACTGTACGAGGGGCCTCTCTAAGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS GCA 72 bp CGAGTCTTCAGGCTTCAGGCCATACCCTCTACTGGATaGCCCGGAAGAGGCACATGGCAAAGATCATGGCGA +
Preference number: 6 (lower is better)
Translates to: RVFRLQAIPSTG*PGRGTWQRSWR
Trigger: TCGCCATGATCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGCCTGAAGCCTGAAGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000520245.5
ENST00000520278.1
ENST00000520358.7
ENST00000521990.1
CDS CCA 72 bp AATGAGCTCTTTCTTCCTCGATGGCCAGTACCCCGATaGCAAGGGCTCCGGCCAAGTAGACGTAGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: NELFLPRWPVPR*QGLRPSRRRSR
Trigger: TCGAGACCTACGTCTACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCATCGAGGAAGAAAGAGCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518429.2
CDS CAA 90 bp GGTGGTCCAGGAGATGCTCACCTCTTTCCACTGGTGTCTTTCCCTTaGGGCCCAGAGGTGCCAAGGTTCTCTTACAGTGTCCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: GGPGDAHLFPLVSFP*GPEVPRFSYSVLLT
Trigger: TGTCAGGAGGACACTGTAAGAGAACCTTGGCACCTCTGGGCCCAAAGGGAAAGACACCAGTGGAAAGAGGTGAGCATCTCCTGGACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000520358.7
ENST00000520999.6
ENST00000533080.5
ENST00000533202.5
ENST00000533786.5
CDS TCA 72 bp GGGCTCCGGCCAAGTAGACGTAGGTCTCGAAGGTGTTaGGGATCACCGTGTAACAGCCCTGCTTGTTTAGGA +
Preference number: 6 (lower is better)
Translates to: GLRPSRRRSRRC*GSPCNSPACLG
Trigger: TCCTAAACAAGCAGGGCTGTTACACGGTGATCCTCAACACCTTCGAGACCTACGTCTACTTGGCCGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340160.7
ENST00000518429.2
ENST00000520245.5
ENST00000520358.7
ENST00000521990.1
CDS TCA 72 bp GGAGGCTGGAAGCTGATACAGGATGCCGGTGGCTTGTaGGACAGAATGAGCTCTTTCTTCCTCGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: GGWKLIQDAGGL*DRMSSFFLDGQ
Trigger: CTGGCCATCGAGGAAGAAAGAGCTCATTCTGTCTCACAAGCCACCGGCATCCTGTATCAGCTTCCAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518429.2
CDS CCA 72 bp GCCATACCCTCTACTGGATGCCCCGGAAGAGGCACATaGCAAAGATCATGGCGAAAAGCTCGATGGCCAGTA +
Preference number: 6 (lower is better)
Translates to: AIPSTGCPGRGT*QRSWRKARWPV
Trigger: TACTGGCCATCGAGCTTTTCGCCATGATCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGAGGGTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000517621.5
ENST00000520245.5
ENST00000520278.1
ENST00000520358.7
ENST00000521990.1
CDS CAA 72 bp GGGCATCAGCAGGACAGACTCTCCCGTCAGCGAGGCTaGTGTATATTTCTTTTATCGGCCCAGCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GHQQDRLSRQRG*CIFLLSAQLES
Trigger: GCTCTCCAGCTGGGCCGATAAAAGAAATATACACAAGCCTCGCTGACGGGAGAGTCTGTCCTGCTGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520837.5
ENST00000520999.6
CDS CCA 72 bp ACAGTGTGCAACCTGAACAACCCTACTCAGCCACCCTaGAAGGAGATCGCTGATGAAACCCGTTTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: TVCNLNNPTQPP*KEIADETRLSP
Trigger: TGGGCTCAAACGGGTTTCATCAGCGATCTCCTTCCAGGGTGGCTGAGTAGGGTTGTTCAGGTTGCACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS CAA 72 bp GGAGATGCTCACCTCTTTCCACTGGTGTCTTTCCCTTaGGGCCCAGAGGTGCCAAGGTTCTCTTACAGTGTC +
Preference number: 6 (lower is better)
Translates to: GDAHLFPLVSFP*GPEVPRFSYSV
Trigger: GACACTGTAAGAGAACCTTGGCACCTCTGGGCCCAAAGGGAAAGACACCAGTGGAAAGAGGTGAGCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340160.7
ENST00000520358.7
ENST00000520999.6
ENST00000533080.5
ENST00000533202.5
ENST00000533786.5
CDS CAA 90 bp AACCCTACTCAGCCACCCTGGAAGGAGATCGCTGATGAAACCCGTTaGAGCCCACTCTGGGTAAATTTCCTTCTGGGTAGGTTGTACGGG +
Preference number: 6 (lower is better)
Translates to: NPTQPPWKEIADETR*SPLWVNFLLGRLYG
Trigger: CCCGTACAACCTACCCAGAAGGAAATTTACCCAGAGTGGGCTCAAACGGGTTTCATCAGCGATCTCCTTCCAGGGTGGCTGAGTAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS TCA 72 bp GTTGCTTTGATGGTAGTGTTAGAAGCTCAGCTCACCTaGAGCTTGAGGGTGGTCCAGGAGATGCTCACCCTC +
Preference number: 6 (lower is better)
Translates to: VALMVVLEAQLT*SLRVVQEMLTL
Trigger: GAGGGTGAGCATCTCCTGGACCACCCTCAAGCTTCAGGTGAGCTGAGCTTCTAACACTACCATCAAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520837.5
CDS CCA 72 bp AAGGAGATCGCTGATGAAACCCGTTTGAGCCCACTCTaGGTAAATTTCCTTCTGGGTAGGTTGTACGGGCTG +
Preference number: 6 (lower is better)
Translates to: KEIADETRLSPL*VNFLLGRLYGL
Trigger: CAGCCCGTACAACCTACCCAGAAGGAAATTTACCCAGAGTGGGCTCAAACGGGTTTCATCAGCGATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520245.5
CDS GCA 72 bp TGGAGAGCCAGCGTTGAGATGTCTGCAAAAGGATTATaGTCGCGTCTCCAGAAATCAAATTCAAGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: WRASVEMSAKGL*SRLQKSNSRGS
Trigger: GGAACCCCTTGAATTTGATTTCTGGAGACGCGAGCATAATCCTTTTGCAGACATCTCAACGCTGGCTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340160.7
ENST00000520358.7
ENST00000520837.5
ENST00000520999.6
ENST00000533080.5
ENST00000533202.5
ENST00000533786.5
CDS CAA 72 bp TATATTTCTTTTATCGGCCCAGCTGGAGAGCCAGCGTaGAGATGTCTGCAAAAGGATTATGCTCGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: YISFIGPAGEPA*RCLQKDYARVS
Trigger: GGAGACGCGAGCATAATCCTTTTGCAGACATCTCAACGCTGGCTCTCCAGCTGGGCCGATAAAAGAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520837.5
ENST00000520999.6