RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN17 (Homo sapiens)

Ensembl gene IDs: ENSG00000048140

Ensembl transcript IDs: ENST00000298564.14, ENST00000310032.12, ENST00000503030.1, ENST00000503045.5, ENST00000504168.5, ENST00000507471.1, ENST00000508164.6, ENST00000514705.5, ENST00000515708.5

Found 412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATaGCCCATACCCTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCA +
Preference number: 1 (lower is better)
Translates to: QDTGQRGQGATLLGT*PIPWPPGSSAQHPS
Trigger: TGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR GCA 90 bp CACATTGCTGGGCACATGCCCCATACCCTGGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGACAGAGCAGCCAGGACCCCAGCGGTG +
Preference number: 1 (lower is better)
Translates to: HIAGHMPHTLATRQQ*PASLNDRAARTPAV
Trigger: CACCGCTGGGGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CCA 90 bp CAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCATACCCTaGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAG +
Preference number: 1 (lower is better)
Translates to: QRGQGATLLGTCPIP*PPGSSAQHPSMTEQ
Trigger: CTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CCA 90 bp TGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTCCGTGGGTaGACAGCACAGCGGTTCAGGCGAACCCCTCAAGGCTCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: WDKRPRRRHSNFLRG*TAQRFRRTPQGSVP
Trigger: TGGGACTGAGCCTTGAGGGGTTCGCCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR TCA 90 bp TCCGAACCCCAGAGCGCTAGTAGGCAGGCACAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCA +
Preference number: 1 (lower is better)
Translates to: SEPQSASRQAQALLE*GCGRKPDPGSVGLA
Trigger: TGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR TCA 90 bp TCTCCCGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATaGCGCCTCCAACTACCACAAACAGCCACACGGGGTCAAGGCCTC +
Preference number: 1 (lower is better)
Translates to: SPGGPQCSQQSPAPT*RLQLPQTATRGQGL
Trigger: GAGGCCTTGACCCCGTGTGGCTGTTTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR CCA 90 bp CATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTCCGTaGGTGGACAGCACAGCGGTTCAGGCGAACCCCTCAAGGCTCAGT +
Preference number: 1 (lower is better)
Translates to: HMGQEAQAEAQQLPP*VDSTAVQANPSRLS
Trigger: ACTGAGCCTTGAGGGGTTCGCCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR CCA 90 bp GGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTCCATTTGCTCCAGTTGGCTTTCACT +
Preference number: 1 (lower is better)
Translates to: GPAVDRTSEMVGVSQ*FSKSSFHLLQLAFT
Trigger: AGTGAAAGCCAACTGGAGCAAATGGAATGATGACTTTGAAAACCACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR TCA 90 bp AGGCTCAAAGTTACAGCTCATAGAAAAGAGTGCTCTGAAGCTGTGTaGGGCAGTGGCTCAGGCAACGCGCCCCATACAGCTACGCACAGA +
Preference number: 1 (lower is better)
Translates to: RLKVTAHRKECSEAV*GSGSGNAPHTATHR
Trigger: TCTGTGCGTAGCTGTATGGGGCGCGTTGCCTGAGCCACTGCCTCACACAGCTTCAGAGCACTCTTTTCTATGAGCTGTAACTTTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR CCA 90 bp GGACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTaGCCTGCAGATTTGATTTCTGAATTAATTTCTGCCAACAACTTA +
Preference number: 1 (lower is better)
Translates to: GPTGAWGQSWVLHLV*PADLISELISANNL
Trigger: TAAGTTGTTGGCAGAAATTAATTCAGAAATCAAATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR GCA 90 bp GCACTCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTaGGAACTTTCTCTCATCACGATGTCTTTGTCTCCAGCAACAGTG +
Preference number: 1 (lower is better)
Translates to: ALSWSQGKWLLPTRL*ELSLITMSLSPATV
Trigger: CACTGTTGCTGGAGACAAAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCCGTAGGCCAGGCATGTaGCCATGGCCTCTGGCGGCC +
Preference number: 2 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLRRPGM*PWPLAA
Trigger: GGCCGCCAGAGGCCATGGCCACATGCCTGGCCTACG...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR CAA 90 bp GGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GSSLSILQVPVFHSR*ARSGLEVQGITLQR
Trigger: CCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAGGCTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCCCCTTCCTAGTCCCCTaGAGAGTCCACCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLPFLVP*RVHHPK
Trigger: TTTGGGGTGGTGGACTCTCCAGGGGACTAGGAAGGG...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: LATRQQCPASLNDRAARTAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR GCA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTCTGCACCCTCTGAGCTaGGCCCTTCCTAGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATLHPLS*ALPSPL
Trigger: CAGGGGACTAGGAAGGGCGCAGCTCAGAGGGTGCAG...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp GACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGAACTTCCTCCGTGGGTaGACAGCACAGCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: DLQGHGAKAGSCTLFGLQNFLRG*TAQRFR
Trigger: CCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTT...CTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR TCA 90 bp CTGGAGGAGGGCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGAGCCCAGCACCGACATaGCGCCTCCAACTACCACAA +
Preference number: 2 (lower is better)
Translates to: LEEGDAHEDSRHHNQVVLSPAPT*RLQLPQ
Trigger: TTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCT...CAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR-3UTR CCA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTCAGCAACTTCCTCCGTaGGTGGACAGCACAGCGGTT +
Preference number: 2 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATQQLPP*VDSTAV
Trigger: AACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTG...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCAGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 2 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR TCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCTTGGCCTGCACCCTCTaGGCTGCGCCCTTCCTAGTC +
Preference number: 2 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGLACTL*AAPFLV
Trigger: GACTAGGAAGGGCGCAGCTCAGAGGGTGCAGGCCAA...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR TCA 90 bp CAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGCAGGCGGCACTTAGGTaGGTAGAACGGGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QGPVSSIYTTYVAPGASEQAALR*VERASW
Trigger: CCAGCTGGCCCGTTCTACTCACCTAAGTGCCGCCTG...CTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR GCA 90 bp AGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTCCCGGAGGGCCCCAATaGAGCCAGCAAAGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RLSWSRIQSLKTKARIPVPGGPQ*SQQSPA
Trigger: TGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGG...AACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR-3UTR CCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR TCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCTGCTCTGAAGCTGTGTaGGGCAGTGGCTCAGGCAAC +
Preference number: 2 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGCSEAV*GSGSGN
Trigger: GTTGCCTGAGCCACTGCCTCACACAGCTTCAGAGCA...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR TCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000515708.5
3UTR-3UTR GCA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGACCGCCCTTCCCAGGCTaGACCCTCTTCAAAGCGGGG +
Preference number: 2 (lower is better)
Translates to: LKESGCYRLDCANFLSSRPPFPG*TLFKAG
Trigger: CCCCGCTTTGAAGAGGGTGCAGCCTGGGAAGGGCGG...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp CTCTCATCACGATGTCTTTGTCTCCAGCAACAGTGGGAAAGTCAAAGTGAAGCAGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 2 (lower is better)
Translates to: LSSRCLCLQQQWESQSEAAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...TGCTTCACTTTGACTTTCCCACTGTTGCTGGAGACAAAGACATCGTGATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000515708.5
3UTR-3UTR CCA 90 bp TCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 2 (lower is better)
Translates to: SLGLKESGCYRLDCANFLAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...GAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000515708.5
3UTR-3UTR CCA 90 bp TGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: CIYCSMYKPLTASACQGPAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...GGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp TTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCAATTAGCTACGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FSRFLSLGLHSHTRAISYGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...GTAGCTAATTGCTCTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp TTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCAATTAGCTACAGCTGTGTGAGGCAGTaGCTCAGGCAACGCGCCCCA +
Preference number: 2 (lower is better)
Translates to: FSRFLSLGLHSHTRAISYSCVRQ*LRQRAP
Trigger: TGGGGCGCGTTGCCTGAGCCACTGCCTCACACAGCT...GTAGCTAATTGCTCTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCACACTGAGGCTGAGGTaGGTTCCTGGCAGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVTLRLR*VPGRLK
Trigger: TTTGAGCCTGCCAGGAACCCACCTCAGCCTCAGTGT...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTTTCACTCCAGATTaGCCCGCAGCGGCCTCGAGG +
Preference number: 2 (lower is better)
Translates to: LKESGCYRLDCANFLSSRCFTPD*PAAASR
Trigger: CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACA...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR TCA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGAAGGGGCATCGGAGTTTaGGATCTCTGGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LKESGCYRLDCANFLSSRRGIGV*DLWTSP
Trigger: TGGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCT...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CCA 90 bp CTCTCATCACGATGTCTTTGTCTCCAGCAACAGTGGGAAAGTCAAAGTGAAGCAGTGTACACACGCATATaGGACAAGAGGCCCAGGCGG +
Preference number: 2 (lower is better)
Translates to: LSSRCLCLQQQWESQSEAVYTRI*DKRPRR
Trigger: CCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACAC...TGCTTCACTTTGACTTTCCCACTGTTGCTGGAGACAAAGACATCGTGATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR GCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTAGCAGGAACATCTCCTaGAGCCTTGCCCGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLSRNIS*SLARQE
Trigger: CTCCTGACGGGCAAGGCTGCAGGAGATGTTCCTGCT...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CCA 90 bp TTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCAATTAGCTACGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: FSRFLSLGLHSHTRAISYAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...GTAGCTAATTGCTCTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CAA 90 bp ACCGCACTCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATaGTGCGAACTTTCTCTCATCACGATGTCTTTGTCTCCAGCAACA +
Preference number: 2 (lower is better)
Translates to: TALSWSQGKWLLPTR*CELSLITMSLSPAT
Trigger: TGTTGCTGGAGACAAAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGAGTGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR GCA 72 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTaGTGGGCACATGCCCCATACCCTGGCCACCCGGCA +
Preference number: 3 (lower is better)
Translates to: PRTLASGAKEPH*WAHAPYPGHPA
Trigger: TGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR GCA 72 bp GGGCACATGCCCCATACCCTGGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGACAGAGCAGCCAGGACC +
Preference number: 3 (lower is better)
Translates to: GHMPHTLATRQQ*PASLNDRAART
Trigger: GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CCA 72 bp AGGCCCAGGCGGAGGCACAGCAACTTCCTCCGTGGGTaGACAGCACAGCGGTTCAGGCGAACCCCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: RPRRRHSNFLRG*TAQRFRRTPQG
Trigger: GCCTTGAGGGGTTCGCCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTGTGCCTCCGCCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CAA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGTGTCCCAGGTAGTGTaGCCACCGAAGAGCCGGCGT +
Preference number: 3 (lower is better)
Translates to: LATRQQCPASLNDRAARTVSQVV*PPKSRR
Trigger: ACGCCGGCTCTTCGGTGGCAACACTACCTGGGACAC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CCA 72 bp CAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTCCGTaGGTGGACAGCACAGCGGTTCAGGCGAACCCCTCA +
Preference number: 3 (lower is better)
Translates to: QEAQAEAQQLPP*VDSTAVQANPS
Trigger: TGAGGGGTTCGCCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR CCA 72 bp CCAGCGGTGACTGTCCCAGAGGGACCTACAGGGGCATaGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: PAVTVPEGPTGA*GQSWVLHLVWP
Trigger: AGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCCCTCTGGGACAGTCACCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR TCA 72 bp GGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATaGCGCCTCCAACTACCACAAACAGCCACACGGGGT +
Preference number: 3 (lower is better)
Translates to: GPQCSQQSPAPT*RLQLPQTATRG
Trigger: ACCCCGTGTGGCTGTTTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR TCA 72 bp CAGAGCGCTAGTAGGCAGGCACAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCAGACCCAGGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: QSASRQAQALLE*GCGRKPDPGSV
Trigger: CACACTCCCTGGGTCTGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTGTGCCTGCCTACTAGCGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR GCA 72 bp AACCCCTCAAGGCTCAGTCCCAGCAGGAACATCTCCTaGAGCCTTGCCCGTCAGGAGTATAGTAGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: NPSRLSPSRNIS*SLARQEYSRRV
Trigger: GACCCTCCTACTATACTCCTGACGGGCAAGGCTGCAGGAGATGTTCCTGCTGGGACTGAGCCTTGAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CAA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAG +
Preference number: 3 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVVFHSR*ARSGLE
Trigger: CTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACAC...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CAA 90 bp GCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGCAGCCACTTCTCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 3 (lower is better)
Translates to: AMPMKTPATTIRLSCSHFSRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...GAAGTGGCTGCAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR-3UTR CAA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAACATCTCCTGCAGCCTaGCCCGTCAGGAGTATAGTA +
Preference number: 3 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRTSPAA*PVRSIV
Trigger: TACTATACTCCTGACGGGCAAGGCTGCAGGAGATGT...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR TCA 72 bp CATCATTCCATTTGCTCCAGTTGGCTTTCACTGCCTTaGTGTCACTCACGAGGTTCTGGGCCAGGCAGATGC +
Preference number: 3 (lower is better)
Translates to: HHSICSSWLSLP*CHSRGSGPGRC
Trigger: GCATCTGCCTGGCCCAGAACCTCGTGAGTGACATCAAGGCAGTGAAAGCCAACTGGAGCAAATGGAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR CCA 72 bp CCCATCCCCACCGCACTCTCTTGGTCTCAAGGAAAGTaGCTGTTACCGACTAGATTGTGCGAACTTTCTCTC +
Preference number: 3 (lower is better)
Translates to: PIPTALSWSQGK*LLPTRLCELSL
Trigger: GAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR-3UTR CAA 90 bp GAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTAACACGGAGAAAAACTaGAGCAGGAAGGTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: EVELVSNPVLEDKGQDPCNTEKN*SRKVFS
Trigger: GGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTT...ACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR CCA 72 bp GTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTCCATTTGCTCCAGTTG +
Preference number: 3 (lower is better)
Translates to: VDRTSEMVGVSQ*FSKSSFHLLQL
Trigger: CAACTGGAGCAAATGGAATGATGACTTTGAAAACCACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
3UTR-3UTR CAA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAAGTCATCATTCCATTaGCTCCTGAGAGGCAAGCAA +
Preference number: 3 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVKSSFH*LLRGKQ
Trigger: TTGCTTGCCTCTCAGGAGCAAATGGAATGATGACTT...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
3UTR-3UTR CAA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCTTCCAGCTACTTCTTTaGCAAAATTGTCCTGACCCC +
Preference number: 3 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIFQLLL*QNCPDP
Trigger: GGGGTCAGGACAATTTTGCAAAAGAAGTAGCTGGAA...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCCCTCCGCAGGGTCCCTaGCGCAGCAGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARSGLEVQGITLQRWEASPPQGP*RSRRRA
Trigger: TGCCCTTCTCCTGCTGCGTCAGGGACCCTGCGGAGG...GCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCCTGCACCCTCTGAGCTaGGCCCTTCCTAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ARSGLEVQGITLQRWEASLHPLS*ALPSPL
Trigger: CAGGGGACTAGGAAGGGCGCAGCTCAGAGGGTGCAG...GCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp TGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: CGRKPDPGSVGLACPLVPAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...GGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAAGGGGCCCAGGACACTaGCCAGCGGGGCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLRGPGH*PAGPRS
Trigger: GCTCCTTGGCCCCGCTGGCCAGTGTCCTGGGCCCCT...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCAGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPGGRCP*RLPPPQ
Trigger: TTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCC...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGGCGGCTGCGGCTTCATaGCCTCGGCCACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: QAAPSSKRGPASPSFRSPAAAAS*PRPHRA
Trigger: CGCTCTGTGTGGCCGAGGCCATGAAGCCGCAGCCGC...CGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000310032.12
CDS-3UTR CCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LATRQQCPASLNDRAARTGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGCTGAGGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTGGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRPRRGQDLGNGGRKPVGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...CACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCAGGACCTACAGGGGCATaGGGCCAAAGCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPGPTGA*GQSWVL
Trigger: CAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCC...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCACATGCCCCATACCCTaGCCACCCGGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LATRQQCPASLNDRAARTTCPIP*PPGSSA
Trigger: GGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGT...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RRAPMQPAKPSTDMTPPTVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...AGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp CGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTCCCGGAGGGCCCCAATaGAGCCAGCAAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RRAPMQPAKPSTDMTPPTPGGPQ*SQQSPA
Trigger: TGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGG...AGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLATRQQ*PASLND
Trigger: GTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGC...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGGCGGCTGCGGCTTCATaGCCTCGGCCACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: DLQGHGAKAGSCTLFGLQAAAAS*PRPHRA
Trigger: CGCTCTGTGTGGCCGAGGCCATGAAGCCGCAGCCGC...CTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298564.14
ENST00000310032.12
CDS-3UTR CCA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCCGCAGCGCTCCCGGCTaGGGTTCAAGTCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCRSAPG*GSSQCS
Trigger: ACTGCACTGACTTGAACCCCAGCCGGGAGCGCTGCG...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTGGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GCTLFKAGSSLSILQVPVAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...CACGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TTGCTGGGCACATGCCCCATACCCTGGCCACCCGGCAGCAGTGCCCAGCATCCCTGTTTCACTCCAGATTaGCCCGCAGCGGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LLGTCPIPWPPGSSAQHPCFTPD*PAAASR
Trigger: CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACA...GGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGCCAGGCATGTGGCCATaGCCTCTGGCGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: QAAPSSKRGPASPSFRSPPGMWP*PLAASP
Trigger: TGGTGAGGCCGCCAGAGGCCATGGCCACATGCCTGG...CGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCCCGCCCTTCCCAGGCTaGACCCTCTTCAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LSILQVPVFHSRLARSGLPPFPG*TLFKAG
Trigger: CCCCGCTTTGAAGAGGGTGCAGCCTGGGAAGGGCGG...GAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGGGACCTACAGGGGCATaGGGCCAAAGCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSFRSPCFTPDWPAAASRGPTGA*GQSWVL
Trigger: CAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCC...CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTCGTAGGCCAGGCATGTaGCCATGGCCTCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVIRRPGM*PWPLAA
Trigger: GGCCGCCAGAGGCCATGGCCACATGCCTGGCCTACG...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp TTGCTGGGCACATGCCCCATACCCTGGCCACCCGGCAGCAGTGCCCAGCATCCCCAGATCTGTCAGCGCTaGGATGTTCGAGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: LLGTCPIPWPPGSSAQHPQICQR*DVRENA
Trigger: GGCGTTCTCTCGAACATCTCAGCGCTGACAGATCTG...GGGATGCTGGGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp TTGACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCCCTCCGCAGGGTCCCTaGCGCAGCAGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTPRSQPSRSPKQAPASPPPQGP*RSRRRA
Trigger: TGCCCTTCTCCTGCTGCGTCAGGGACCCTGCGGAGG...GGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCCAGGCGGCACTTAGGTaGGTAGAACGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSILQVPVFHSRLARSGLQAALR*VERASW
Trigger: CCAGCTGGCCCGTTCTACTCACCTAAGTGCCGCCTG...GAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCAGGGGCATCGGAGTTTaGGATCTCTGGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGSVGLACPLVPIRQLCSRGIGV*DLWTSP
Trigger: TGGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCT...GCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCTTGGCCTGCACCCTCTaGGCTGCGCCCTTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITLACTL*AAPFLV
Trigger: GACTAGGAAGGGCGCAGCTCAGAGGGTGCAGGCCAA...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR GCA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTCCTTGCCCGGAGCCCTaGTGTCCCCGCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFPCPEP*CPRLWT
Trigger: GGTCCAGAGGCGGGGACAGCAGGGCTCCGGGCAAGG...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310032.12
CDS-3UTR GCA 90 bp CCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: PQRPRGAGNNPAEVGGQLSGSWK*WCLPGM
Trigger: CATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGA...GAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGCGCAGCGCTCCCGGCTaGGGTTCAAGTCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DLQGHGAKAGSCTLFGLQRSAPG*GSSQCS
Trigger: ACTGCACTGACTTGAACCCCAGCCGGGAGCGCTGCG...CTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCACAGATGCCAAAGATCTaGAGGAGGGCGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPQMPKI*RRAMPM
Trigger: CATGGGCATCGCCCTCCTCCAGATCTTTGGCATCTG...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCCAGATGCCAAAGATCTaGAGGAGGGCGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: CGRKPDPGSVGLACPLVPQMPKI*RRAMPM
Trigger: CATGGGCATCGCCCTCCTCCAGATCTTTGGCATCTG...GGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGCATGGGGCCAAAGCTaGGTCCTGCACCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LATRQQCPASLNDRAARTAWGQS*VLHLVW
Trigger: CCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCAACTTCCTCCGTGGGTaGACAGCACAGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLNFLRG*TAQRFR
Trigger: CCTGAACCGCTGTGCTGTCCACCCACGGAGGAAGTT...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGAGCCCAGCACCGACATaGCGCCTCCAACTACCACAA +
Preference number: 4 (lower is better)
Translates to: PSFRSPCFTPDWPAAASRSPAPT*RLQLPQ
Trigger: TTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCT...CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GCCCAGCACCGACATGACGCCTCCAACTACCACAAACAGCCACACGGGGTCAAGGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: AQHRHDASNYHKQPHGVKGGRCP*RLPPPQ
Trigger: TTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCC...CTTGACCCCGTGTGGCTGTTTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR TCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTCCCAGCATCCCTCAATaGCAGAGCAGCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAPSIPQ*QSSQDP
Trigger: GGGGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGG...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp TCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTAGCATCCAGACCTCCTTaGCCGGAGCCCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: STIQIPQTGSRQSHGFQLASRPP*PEPCCP
Trigger: GGGACAGCAGGGCTCCGGGCAAGGAGGTCTGGATGC...TAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310032.12
CDS-3UTR GCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCAGTGTGGGGCTGGCATaGCCTCTAGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITSVGLA*PLVPIR
Trigger: CCTGATGGGCACTAGAGGGCATGCCAGCCCCACACT...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAATRQQ*PASLND
Trigger: GTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGC...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASATRQQ*PASLND
Trigger: GTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGC...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCCACCCGGCAGCAGTaGCCAGCATCCCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPATRQQ*PASLND
Trigger: GTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGC...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCCGCAGCGCTCCCGGCTaGGGTTCAAGTCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASRSAPG*GSSQCS
Trigger: ACTGCACTGACTTGAACCCCAGCCGGGAGCGCTGCG...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGSVGLACPLVPIRQLCSAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...GCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTGGGGCCCTTGGTGACTaGGGAGGCAGTGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GAGNNPAEVGGQLLVYKGGALGD*GGSVPG
Trigger: ACCTGGGACACTGCCTCCCCAGTCACCAAGGGCCCC...ACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGGACCTACAGGGGCATaGGGCCAAAGCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPGPTGA*GQSWVL
Trigger: CAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCC...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TTGACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCAAGGGGAGGGGCACGTaGGGCCACAAGGGTACCTGG +
Preference number: 4 (lower is better)
Translates to: LTPRSQPSRSPKQAPASPKGRGT*GHKGTW
Trigger: CCAGGTACCCTTGTGGCCCCACGTGCCCCTCCCCTT...GGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp CAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGCCCTTCCTAGTCCCCTaGAGAGTCCACCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: QAAPSSKRGPASPSFRSPPFLVP*RVHHPK
Trigger: TTTGGGGTGGTGGACTCTCCAGGGGACTAGGAAGGG...CGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTCAGATCTGTCAGCGCTaGGATGTTCGAGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: RRAPMQPAKPSTDMTPPTQICQR*DVRENA
Trigger: GGCGTTCTCTCGAACATCTCAGCGCTGACAGATCTG...AGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR TCA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCAGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAAGGRCP*RLPPPQ
Trigger: TTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCC...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCAGGGGCATCGGAGTTTaGGATCTCTGGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITRGIGV*DLWTSP
Trigger: TGGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCT...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTCCGCCCTTCCCAGGCTaGACCCTCTTCAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFPPFPG*TLFKAG
Trigger: CCCCGCTTTGAAGAGGGTGCAGCCTGGGAAGGGCGG...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GAGGCAGTGGCTCAGGCAACGCGCCCCATACAGCTACGCACAGAAAGGTGCGTCCCCATCAGGCAGCTCTaGAGCCACGGTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EAVAQATRPIQLRTERCVPIRQL*SHGEDA
Trigger: AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGG...GACGCACCTTTCTGTGCGTAGCTGTATGGGGCGCGTTGCCTGAGCCACTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR GCA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTAGTGTGGGGCTGGCATaGCCTCTAGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVISVGLA*PLVPIR
Trigger: CCTGATGGGCACTAGAGGGCATGCCAGCCCCACACT...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCGCCAAGGAGCCACATTaGTGGGCACATGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITAKEPH*WAHAPY
Trigger: GTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGC...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITPTSGS*KCWCLP
Trigger: CGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGG...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCATGAAGAGGTTGAGCTaGTCTCGAATCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARSGLEVQGITLQRWEASMKRLS*SRIQSL
Trigger: CAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT...GCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCCTCCCGCCAGTCCCATaGCTTCCAGCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLLPPVP*LPATSF
Trigger: AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAG...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTGGACCTACAGGGGCATaGGGCCAAAGCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIGPTGA*GQSWVL
Trigger: CAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTCC...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CAA 72 bp CTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACC +
Preference number: 4 (lower is better)
Translates to: LSILQVPVFHSR*ARSGLEVQGIT
Trigger: GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCAGATCTGTCAGCGCTaGGATGTTCGAGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITQICQR*DVRENA
Trigger: GGCGTTCTCTCGAACATCTCAGCGCTGACAGATCTG...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCACACGGAGAAAAACTTaGGCAGGAAGGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LATRQQCPASLNDRAARTTRRKT*AGRCSP
Trigger: GGGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGT...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCACCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPPEQSQ*GSGGQC
Trigger: ACATTGACCTCCAGAACCTCATTGACTTTGCTCAGG...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCTGGCTTTCACTGCCTTaGTGTCACTCACGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCWLSLP*CHSRGS
Trigger: AGAACCTCGTGAGTGACATCAAGGCAGTGAAAGCCA...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
CDS-3UTR TCA 90 bp GGCAGCTCTGCAGCCACGGTGAAGATGCTGAACTTGACTCCTAGGAGTCAACCAGTCAGAGAGTTCTGCTaGGGCCCCGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GSSAATVKMLNLTPRSQPVREFC*GPAVDR
Trigger: CCTGTCCACGGCGGGGCCTCAGCAGAACTCTCTGAC...TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTCAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAQALLE*GCGRKP
Trigger: TGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTG...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCGTGGGAAAGTCAAAGTaGAGCAGGCTCCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCVGKSK*SRLPTQ
Trigger: TTGAGTTGGGAGCCTGCTTCACTTTGACTTTCCCAC...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCATCCTGGAAATGCTGGTaGTTGCCGGGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPSWKCW*LPGMVS
Trigger: GCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGA...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTGGAGGAGGGCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGTCCTGGAAATGCTGGTaGTTGCCGGGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LEEGDAHEDSRHHNQVVLSWKCW*LPGMVS
Trigger: GCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGA...CAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGACCCGGAGGGCCCCAATaGAGCCAGCAAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRPGGPQ*SQQSPA
Trigger: TGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGG...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCAAGTGTGGGGCTGGCATaGCCTCTAGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAASVGLA*PLVPIR
Trigger: CCTGATGGGCACTAGAGGGCATGCCAGCCCCACACT...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCGCCAAGGAGCCACATTaGTGGGCACATGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASAKEPH*WAHAPY
Trigger: GTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGC...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp TCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTAGACGGTGGCTCCCTGTaGACACGTGTGCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: STIQIPQTGSRQSHGFQLDGGSL*TRVPAC
Trigger: ACATGCAGGCACACGTGTGCACAGGGAGCCACCGTC...TAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGGTTCCTGGAAATGCTaGTGCTTGCCGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPGSWKC*CLPGMV
Trigger: CACCATGCCCGGCAAGCACCAGCATTTCCAGGAACC...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVIPTSGS*KCWCLP
Trigger: CGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGG...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAGCACCGACATGACGCCTCCAACTACCACAAACAGCCACACGGGGTCAAGGCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PSTDMTPPTTTNSHTGSRPTSGS*KCWCLP
Trigger: CGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGG...CCTTGACCCCGTGTGGCTGTTTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCACCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPPTSGS*KCWCLP
Trigger: CGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGG...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATGAAGAGGTTGAGCTaGTCTCGAATCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CGRKPDPGSVGLACPLVPMKRLS*SRIQSL
Trigger: CAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT...GGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTATGTTTCACTCCAGATTaGCCCGCAGCGGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: STIQIPQTGSRQSHGFQLCFTPD*PAAASR
Trigger: CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACA...TAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGAGGGGCCCAGGACACTaGCCAGCGGGGCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PAAFIVACTNHSQPAPVRRGPGH*PAGPRS
Trigger: GCTCCTTGGCCCCGCTGGCCAGTGTCCTGGGCCCCT...CCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCAGGACACTaGCCAGCGGGGCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVRGPGH*PAGPRS
Trigger: GCTCCTTGGCCCCGCTGGCCAGTGTCCTGGGCCCCT...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTGGCCACAAGGGTACCTaGAGGAGGGCGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: CVHTHMGQEAQAEAQQLPGHKGT*RRAMPM
Trigger: CATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCC...AGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTTGTGGCCATGGCCTCTaGCGGCCTCACCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFCGHGL*RPHQLA
Trigger: AGCCAACTGGTGAGGCCGCCAGAGGCCATGGCCACA...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCCAGATCTGTCAGCGCTaGGATGTTCGAGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASQICQR*DVRENA
Trigger: GGCGTTCTCTCGAACATCTCAGCGCTGACAGATCTG...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGACACGGAGAAAAACTTaGGCAGGAAGGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSFRSPCFTPDWPAAASRTRRKT*AGRCSP
Trigger: GGGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGT...CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGCTGAGGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTGCCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LLRPRRGQDLGNGGRKPVPEQSQ*GSGGQC
Trigger: ACATTGACCTCCAGAACCTCATTGACTTTGCTCAGG...CACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000503030.1
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCACCTCCGCAGGGTCCCTaGCGCAGCAGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PTQGPVSSIYTTYVAPGAPPQGP*RSRRRA
Trigger: TGCCCTTCTCCTGCTGCGTCAGGGACCCTGCGGAGG...TGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp TCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGCTAGTAGGCAGGCACAGGCCCAGCATCCCTCAATaGCAGAGCAGCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SEKFPNSPNPRALVGRHRPSIPQ*QSSQDP
Trigger: GGGGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGG...CCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCCCGCCCTTCCCAGGCTaGACCCTCTTCAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGPPFPG*TLFKAG
Trigger: CCCCGCTTTGAAGAGGGTGCAGCCTGGGAAGGGCGG...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTCCCATCAGGCAGCTCTaGAGCCACGGTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIPIRQL*SHGEDA
Trigger: AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGG...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TTGACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCGGTTCCTGGAAATGCTaGTGCTTGCCGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LTPRSQPSRSPKQAPASPGSWKC*CLPGMV
Trigger: CACCATGCCCGGCAAGCACCAGCATTTCCAGGAACC...GGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMPTSGS*KCWCLP
Trigger: CGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGG...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTAAGTCAATGAGGTTCTaGAGGTCAATGTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RRAPMQPAKPSTDMTPPTKSMRF*RSMSSR
Trigger: CCGGGACGACATTGACCTCCAGAACCTCATTGACTT...AGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp CAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: QGPVSSIYTTYVAPGASEAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...CTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCTGGTCTCAAGGAAAGTaGCTGTTACCGACTAGATTG +
Preference number: 4 (lower is better)
Translates to: CGRKPDPGSVGLACPLVPWSQGK*LLPTRL
Trigger: CAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCA...GGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCACATGCCCCATACCCTaGCCACCCGGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGTCPIP*PPGSSA
Trigger: GGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGT...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGCAGCTCTGCAGCCACGGTGAAGATGCTGAACTTGACTCCTAGGAGTCAACCAAGCTGTGTGAGGCAGTaGCTCAGGCAACGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSSAATVKMLNLTPRSQPSCVRQ*LRQRAP
Trigger: TGGGGCGCGTTGCCTGAGCCACTGCCTCACACAGCT...TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTCTCGAATCCAGTCCTTaGAGACAAAGGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDALESSP*RQRPGS
Trigger: GGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAG...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTCTCGAATCCAGTCCTTaGAGACAAAGGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVILESSP*RQRPGS
Trigger: GGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAG...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCCTCGAATCCAGTCCTTaGAGACAAAGGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASLESSP*RQRPGS
Trigger: GGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAG...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTACCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLPEQSQ*GSGGQC
Trigger: ACATTGACCTCCAGAACCTCATTGACTTTGCTCAGG...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGGGRCP*RLPPPQ
Trigger: TTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCC...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTAGGGGCATCGGAGTTTaGGATCTCTGGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFRGIGV*DLWTSP
Trigger: TGGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCT...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTACCACAAGCCACACTGGGTGTTaGGGACATCCTCGTATTCCT +
Preference number: 4 (lower is better)
Translates to: APMQPAKPSTDMTPPTTTSHTGC*GHPRIP
Trigger: AGGAATACGAGGATGTCCTCAACACCCAGTGTGGCT...TGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMSGSWK*WCLPGM
Trigger: CATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGA...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGCCCGGAGGGCCCCAATaGAGCCAGCAAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAAFIVACTNHSQPAPVRPGGPQ*SQQSPA
Trigger: TGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGG...CCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp TGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTGCCAAGGAGCCACATTaGTGGGCACATGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: CVHTHMGQEAQAEAQQLPAKEPH*WAHAPY
Trigger: GTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGC...AGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCAAGTCAATGAGGTTCTaGAGGTCAATGTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITKSMRF*RSMSSR
Trigger: CCGGGACGACATTGACCTCCAGAACCTCATTGACTT...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 4 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTGCTGAGGCCCCGCCGTaGACAGGACCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RLSWSRIQSLKTKARIPVAEAPP*TGPRKW
Trigger: CCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGC...AACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTCCCACCGCACTCTCTTaGTCTCAAGGAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIPTALS*SQGKWL
Trigger: CAGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGG...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGTCCTGCACCTTGTTTaGCCTGCAGATTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LATRQQCPASLNDRAARTVLHLV*PADLIS
Trigger: AGAAATCAAATCTGCAGGCCAAACAAGGTGCAGGAC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCACATGCCCCATACCCTaGCCACCCGGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVTCPIP*PPGSSA
Trigger: GGCACTGCTGCCGGGTGGCCAGGGTATGGGGCATGT...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTCAGCAACTTCCTCCGTaGGTGGACAGCACAGCGGTT +
Preference number: 4 (lower is better)
Translates to: CVHTHMGQEAQAEAQQLPQQLPP*VDSTAV
Trigger: AACCGCTGTGCTGTCCACCCACGGAGGAAGTTGCTG...AGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CTGGAGGAGGGCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGACACGGAGAAAAACTTaGGCAGGAAGGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LEEGDAHEDSRHHNQVVLTRRKT*AGRCSP
Trigger: GGGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGT...CAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR TCA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTTGGCTTTCACTGCCTTaGTGTCACTCACGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAWLSLP*CHSRGS
Trigger: AGAACCTCGTGAGTGACATCAAGGCAGTGAAAGCCA...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
CDS-3UTR TCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAAGGGGCATCGGAGTTTaGGATCTCTGGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRRGIGV*DLWTSP
Trigger: TGGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCT...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GGCAGCTCTGCAGCCACGGTGAAGATGCTGAACTTGACTCCTAGGAGTCAACCAAGCAGGAACATCTCCTaGAGCCTTGCCCGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSSAATVKMLNLTPRSQPSRNIS*SLARQE
Trigger: CTCCTGACGGGCAAGGCTGCAGGAGATGTTCCTGCT...TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp CTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCATGAAGAGGTTGAGCTaGTCTCGAATCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSILQVPVFHSRLARSGLMKRLS*SRIQSL
Trigger: CAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT...GAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGCTCCCGCCAGTCCCATaGCTTCCAGCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMLPPVP*LPATSF
Trigger: AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAG...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCACTCCCGCCAGTCCCATaGCTTCCAGCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAALPPVP*LPATSF
Trigger: AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAG...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TTCCCAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCTTTATACAACATACGTaGCCCCAGGGGCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: FPGCTLFKAGSSLSILQVFIQHT*PQGHRS
Trigger: ACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAA...GACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTATGGTCTCAAGGAAAGTaGCTGTTACCGACTAGATTG +
Preference number: 4 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLWSQGK*LLPTRL
Trigger: CAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCA...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAGCATGGGGCCAAAGCTaGGTCCTGCACCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRAWGQS*VLHLVW
Trigger: CCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGC...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTACACTGAGGCTGAGGTaGGTTCCTGGCAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFTLRLR*VPGRLK
Trigger: TTTGAGCCTGCCAGGAACCCACCTCAGCCTCAGTGT...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCAAGACCAGTATTCCTaGGCAAAGTCAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITQDQYS*AKSMRF
Trigger: GAACCTCATTGACTTTGCTCAGGAATACTGGTCTTG...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCCCCCTCTCACCAGTTTaGGCCGGACGTCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIPLSPV*AGRRSH
Trigger: GTGGCTACGACGTCCGGCTCAAACTGGTGAGAGGGG...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310032.12
CDS-3UTR GCA 90 bp TCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGCTAGTAGGCAGGCACAGGTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: SEKFPNSPNPRALVGRHRSGSWK*WCLPGM
Trigger: CATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGA...CCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGCCCGGAGGGCCCCAATaGAGCCAGCAAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQPGGPQ*SQQSPA
Trigger: TGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGG...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTTACCGACTAGATTGTaGGAACTTTCTCTCATCACG +
Preference number: 4 (lower is better)
Translates to: PSFRSPCFTPDWPAAASRLPTRL*ELSLIT
Trigger: CGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAA...CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCGCCAAGGAGCCACATTaGTGGGCACATGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGAKEPH*WAHAPY
Trigger: GTATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGC...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAGCACCGACATGACGCCTCCAACTACCACAAACAGCCACACGGGGTCAAGGATGAAGAGGTTGAGCTaGTCTCGAATCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSTDMTPPTTTNSHTGSRMKRLS*SRIQSL
Trigger: CAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT...CCTTGACCCCGTGTGGCTGTTTGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGACAGATGCCAAAGATCTaGAGGAGGGCGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRQMPKI*RRAMPM
Trigger: CATGGGCATCGCCCTCCTCCAGATCTTTGGCATCTG...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 4 (lower is better)
Translates to: PVFHSRLARSGLEVQGITVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTTTTATACAACATACGTaGCCCCAGGGGCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: GAGNNPAEVGGQLLVYKGFIQHT*PQGHRS
Trigger: ACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAA...ACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCGTGTACACACGCATATaGGACAAGAGGCCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGVYTRI*DKRPRR
Trigger: CCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACAC...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTCCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATPEQSQ*GSGGQC
Trigger: ACATTGACCTCCAGAACCTCATTGACTTTGCTCAGG...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCCAAGACCAGTATTCCTaGGCAAAGTCAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RSQPSRSPKQAPASPMASQDQYS*AKSMRF
Trigger: GAACCTCATTGACTTTGCTCAGGAATACTGGTCTTG...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCACAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTQGPVSSIYTTYVAPGAQALLE*GCGRKP
Trigger: TGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTG...TGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCCAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVQALLE*GCGRKP
Trigger: TGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTG...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGTTTGAGATCCCCAGCATCCCTCAATaGCAGAGCAGCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: VSSIYTTYVAPGASEFEIPSIPQ*QSSQDP
Trigger: GGGGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGG...GATCTCAAACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGCCCAGCATCCCTCAATaGCAGAGCAGCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQPSIPQ*QSSQDP
Trigger: GGGGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGG...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTCTCCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCTTACCGACTAGATTGTaGGAACTTTCTCTCATCACG +
Preference number: 4 (lower is better)
Translates to: LSILQVPVFHSRLARSGLLPTRL*ELSLIT
Trigger: CGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAA...GAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTGGTTCCTGGAAATGCTaGTGCTTGCCGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RLSWSRIQSLKTKARIPVGSWKC*CLPGMV
Trigger: CACCATGCCCGGCAAGCACCAGCATTTCCAGGAACC...AACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp GCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTACCACAGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 4 (lower is better)
Translates to: APMQPAKPSTDMTPPTTTVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...TGTGGTAGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp TTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCAGGACCCACCGCACTCTCTTaGTCTCAAGGAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FIVACTNHSQPAPVRGPGPTALS*SQGKWL
Trigger: CAGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGG...TCCTGGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGTCCTGCACCTTGTTTaGCCTGCAGATTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPVLHLV*PADLIS
Trigger: AGAAATCAAATCTGCAGGCCAAACAAGGTGCAGGAC...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CAA 72 bp TCAGGCAGCTCTGCAGCCACGGTGAAGATGCTGAACTaGACTCCTAGGAGTCAACCATCCAGATCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGSSAATVKMLN*TPRSQPSRSPK
Trigger: TTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCCACACTGGGTGTTaGGGACATCCTCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQSHTGC*GHPPQG
Trigger: ACCCTGCGGAGGATGTCCTCAACACCCAGTGTGGCT...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp TCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCCAGGCGGCACTTAGGTaGGTAGAACGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGLKESGCYRLDCANFLQAALR*VERASW
Trigger: CCAGCTGGCCCGTTCTACTCACCTAAGTGCCGCCTG...GAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAGTGGGAAAGTCAAAGTaGAGCAGGCTCCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRVGKSK*SRLPTQ
Trigger: TTGAGTTGGGAGCCTGCTTCACTTTGACTTTCCCAC...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGACATCCTCGTATTCCTaGGCAAAGTCAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMTSSYS*AKSMRF
Trigger: GAACCTCATTGACTTTGCTCAGGAATACGAGGATGT...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp GCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGCAGCCACTTCACATCCTCGTATTCCTaGGCAAAGTCAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AMPMKTPATTIRLSCSHFTSSYS*AKSMRF
Trigger: GAACCTCATTGACTTTGCTCAGGAATACGAGGATGT...GAAGTGGCTGCAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCTCCTGGAAATGCTGGTaGTTGCCGGGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: NSRACFIHLYNIRGPRGISWKCW*LPGMVS
Trigger: GCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGA...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCCCCATCAGGCAGCTCTaGAGCCACGGTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIPIRQL*SHGEDA
Trigger: AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGG...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGTGTGGGGCTGGCATaGCCTCTAGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQSVGLA*PLVPIR
Trigger: CCTGATGGGCACTAGAGGGCATGCCAGCCCCACACT...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTTTACCGACTAGATTGTaGGAACTTTCTCTCATCACG +
Preference number: 4 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVILPTRL*ELSLIT
Trigger: CGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAA...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCAGCCGGCGTAGCCAGGTaGTCATTCTTCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTQGPVSSIYTTYVAPGAAGVAR*SFFKRS
Trigger: GCTTCTCTTGAAGAATGACCACCTGGCTACGCCGGC...TGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTTGGTCTCAAGGAAAGTaGCTGTTACCGACTAGATTG +
Preference number: 4 (lower is better)
Translates to: GAGNNPAEVGGQLLVYKGWSQGK*LLPTRL
Trigger: CAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCA...ACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCACACGGAGAAAAACTTaGGCAGGAAGGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGTRRKT*AGRCSP
Trigger: GGGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGT...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCACTCGAATCCAGTCCTTaGAGACAAAGGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: PTQGPVSSIYTTYVAPGALESSP*RQRPGS
Trigger: GGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAG...TGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGACCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRPEQSQ*GSGGQC
Trigger: ACATTGACCTCCAGAACCTCATTGACTTTGCTCAGG...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTCAGGCGGCACTTAGGTaGGTAGAACGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLQAALR*VERASW
Trigger: CCAGCTGGCCCGTTCTACTCACCTAAGTGCCGCCTG...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGTTTGAGATCCAGGCTCTACTAGAGTaGGGTTGCGGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VSSIYTTYVAPGASEFEIQALLE*GCGRKP
Trigger: TGGCTTCCTCCCGCAACCTCACTCTAGTAGAGCCTG...GATCTCAAACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCGTGGGAAAGTCAAAGTaGAGCAGGCTCCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGVGKSK*SRLPTQ
Trigger: TTGAGTTGGGAGCCTGCTTCACTTTGACTTTCCCAC...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp ATGAAGAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: MKRLSWSRIQSLKTKARISGSWK*WCLPGM
Trigger: CATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGA...GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR GCA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCAAGTCATCATTCCATTTaGTCCAGTTGGCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAASHHSI*SSWLSL
Trigger: CAGTGAAAGCCAACTGGAGCAAATGGAATGATGACT...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310032.12
ENST00000508164.6
CDS-3UTR CCA 90 bp TTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCAGGAAAGTCAATGAGGTTCTaGAGGTCAATGTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: FIVACTNHSQPAPVRGPGKSMRF*RSMSSR
Trigger: CCGGGACGACATTGACCTCCAGAACCTCATTGACTT...TCCTGGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCAATTAGCTACTGTTTCACTCCAGATTaGCCCGCAGCGGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: FSRFLSLGLHSHTRAISYCFTPD*PAAASR
Trigger: CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACA...GTAGCTAATTGCTCTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGACAAATCTGTATTTCTaGCTTCTCCAGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: DLQGHGAKAGSCTLFGLQTNLYF*LLQISV
Trigger: GACAGAAATCTGGAGAAGCCAGAAATACAGATTTGT...CTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp ATGAAGAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCTCGAATCCAGTCCTTaGAGACAAAGGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: MKRLSWSRIQSLKTKARILESSP*RQRPGS
Trigger: GGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAG...GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR TCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTAGCCACACTGGGTGTTaGGGACATCCTCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLSHTGC*GHPPQG
Trigger: ACCCTGCGGAGGATGTCCTCAACACCCAGTGTGGCT...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp CCGGTAGGCCTTGACGTTGTTGTTGATGAAGAGGTTGAGCTGGTCTCGAATCCATGGCTTTCACTGCCTTaGTGTCACTCACGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PVGLDVVVDEEVELVSNPWLSLP*CHSRGS
Trigger: AGAACCTCGTGAGTGACATCAAGGCAGTGAAAGCCA...TGGATTCGAGACCAGCTCAACCTCTTCATCAACAACAACGTCAAGGCCTACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR TCA 90 bp TTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAGCAATTAGCTACTGCTCTGAAGCTGTGTaGGGCAGTGGCTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: FSRFLSLGLHSHTRAISYCSEAV*GSGSGN
Trigger: GTTGCCTGAGCCACTGCCTCACACAGCTTCAGAGCA...GTAGCTAATTGCTCTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR GCA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGACCCATCAGGCAGCTCTaGAGCCACGGTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LKESGCYRLDCANFLSSRPIRQL*SHGEDA
Trigger: AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGG...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCCTCCCGCCAGTCCCATaGCTTCCAGCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NSRACFIHLYNIRGPRGILPPVP*LPATSF
Trigger: AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAG...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGTTTATACAACATACGTaGCCCCAGGGGCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: PAAFIVACTNHSQPAPVRFIQHT*PQGHRS
Trigger: ACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAA...CCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCTTTATACAACATACGTaGCCCCAGGGGCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: LPAAFIVACTNHSQPAPVFIQHT*PQGHRS
Trigger: ACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAA...GACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CCAGCCTTCCCAAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAGTCCTGCACCTTGTTTaGCCTGCAGATTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: PAFPSLSQLALRNSQTLRVLHLV*PADLIS
Trigger: AGAAATCAAATCTGCAGGCCAAACAAGGTGCAGGAC...TCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGGGAAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCAGCATGGGGCCAAAGCTaGGTCCTGCACCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GLKESGCYRLDCANFLSSAWGQS*VLHLVW
Trigger: CCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGC...TGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTAGGGGCCCAGGACACTaGCCAGCGGGGCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCRGPGH*PAGPRS
Trigger: GCTCCTTGGCCCCGCTGGCCAGTGTCCTGGGCCCCT...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGTTACCGACTAGATTGTaGGAACTTTCTCTCATCACG +
Preference number: 4 (lower is better)
Translates to: KPEPVGSEKFPNSPNPRALPTRL*ELSLIT
Trigger: CGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAA...CGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GTTGAGGACATCCTCGTATTCCTGAGCAAAGTCAATGAGGTTCTGGAGGTCAATCAGATGCCAAAGATCTaGAGGAGGGCGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: VEDILVFLSKVNEVLEVNQMPKI*RRAMPM
Trigger: CATGGGCATCGCCCTCCTCCAGATCTTTGGCATCTG...ATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACGAGGATGTCCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp CAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTC +
Preference number: 4 (lower is better)
Translates to: QGPVSSIYTTYVAPGASEVGVSQ*FSKSSF
Trigger: GAATGATGACTTTGAAAACCACTGGCTTACGCCCAC...CTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCCCCACCGCACTCTCTTaGTCTCAAGGAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGLKESGCYRLDCANFLPTALS*SQGKWL
Trigger: CAGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGG...GAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTGCATGGGGCCAAAGCTaGGTCCTGCACCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLAWGQS*VLHLVW
Trigger: CCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGC...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTCCGCCCTTCCCAGGCTaGACCCTCTTCAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCPPFPG*TLFKAG
Trigger: CCCCGCTTTGAAGAGGGTGCAGCCTGGGAAGGGCGG...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGAAGTCAATGAGGTTCTaGAGGTCAATGTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQKSMRF*RSMSSR
Trigger: CCGGGACGACATTGACCTCCAGAACCTCATTGACTT...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp TCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTGGCTTTCACTGCCTTaGTGTCACTCACGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLGLKESGCYRLDCANFLWLSLP*CHSRGS
Trigger: AGAACCTCGTGAGTGACATCAAGGCAGTGAAAGCCA...GAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
CDS-3UTR TCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTCAGGCGGCACTTAGGTaGGTAGAACGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCQAALR*VERASW
Trigger: CCAGCTGGCCCGTTCTACTCACCTAAGTGCCGCCTG...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp CCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCAAGTCATCATTCCATTTaGTCCAGTTGGCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: PTQGPVSSIYTTYVAPGASHHSI*SSWLSL
Trigger: CAGTGAAAGCCAACTGGAGCAAATGGAATGATGACT...TGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310032.12
ENST00000508164.6
CDS-3UTR CCA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGATGAAGAGGTTGAGCTaGTCTCGAATCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQMKRLS*SRIQSL
Trigger: CAAGGACTGGATTCGAGACCAGCTCAACCTCTTCAT...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGTCCTGCACCTTGTTTaGCCTGCAGATTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIVLHLV*PADLIS
Trigger: AGAAATCAAATCTGCAGGCCAAACAAGGTGCAGGAC...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTACCCATTTCAGAGTCTaGGACACTGAGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLTHFRV*DTEAEV
Trigger: CACCTCAGCCTCAGTGTCCCAGACTCTGAAATGGGT...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTAGCCACACTGGGTGTTaGGGACATCCTCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCSHTGC*GHPPQG
Trigger: ACCCTGCGGAGGATGTCCTCAACACCCAGTGTGGCT...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp TGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCACAAATCTGTATTTCTaGCTTCTCCAGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CIYCSMYKPLTASACQGPTNLYF*LLQISV
Trigger: GACAGAAATCTGGAGAAGCCAGAAATACAGATTTGT...GGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACAAGACCAGTATTCCTaGGCAAAGTCAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLKESGCYRLDCANFLSSQDQYS*AKSMRF
Trigger: GAACCTCATTGACTTTGCTCAGGAATACTGGTCTTG...TGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTCATTCCATTTGCTCCTaGGAGGCAAGCAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLHSICS*EASKRK
Trigger: CTTTCTCTTGCTTGCCTCTCAGGAGCAAATGGAATG...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CCA 90 bp CTCTCATCACGATGTCTTTGTCTCCAGCAACAGTGGGAAAGTCAAAGTGAAGCATGGTCTCAAGGAAAGTaGCTGTTACCGACTAGATTG +
Preference number: 4 (lower is better)
Translates to: LSSRCLCLQQQWESQSEAWSQGK*LLPTRL
Trigger: CAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCA...TGCTTCACTTTGACTTTCCCACTGTTGCTGGAGACAAAGACATCGTGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATG +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCSGSWK*WCLPGM
Trigger: CATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGA...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR GCA 90 bp GTTGAGGACATCCTCGTATTCCTGAGCAAAGTCAATGAGGTTCTGGAGGTCAATAGTCATCATTCCATTTaGTCCAGTTGGCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: VEDILVFLSKVNEVLEVNSHHSI*SSWLSL
Trigger: CAGTGAAAGCCAACTGGAGCAAATGGAATGATGACT...ATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACGAGGATGTCCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTCCCACCGCACTCTCTTaGTCTCAAGGAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCPTALS*SQGKWL
Trigger: CAGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGG...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
3UTR CAA 72 bp TCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATaGTGCGAACTTTCTCTCATCACGATGTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SWSQGKWLLPTR*CELSLITMSLS
Trigger: AGACAAAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR TCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTAGCCACACTGGGTGTTaGGGACATCCTCGTATTCCT +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCSHTGC*GHPRIP
Trigger: AGGAATACGAGGATGTCCTCAACACCCAGTGTGGCT...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR TCA 90 bp AAATCAGGACATCTCACATACAAATCTGTATTTCTGGCTTCTCCAGATTTCTGTGTGGGAAAGTCAAAGTaGAGCAGGCTCCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: KSGHLTYKSVFLASPDFCVGKSK*SRLPTQ
Trigger: TTGAGTTGGGAGCCTGCTTCACTTTGACTTTCCCAC...ACAGAAATCTGGAGAAGCCAGAAATACAGATTTGTATGTGAGATGTCCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CCA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGAACAAATCTGTATTTCTaGCTTCTCCAGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LKESGCYRLDCANFLSSRTNLYF*LLQISV
Trigger: GACAGAAATCTGGAGAAGCCAGAAATACAGATTTGT...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS TCA 90 bp AGCCGACCTCAGGTTCCTGGAAATGCTGGTGCTTGCCGGGCATGGTaGGCGGCCACCCGCCGGCCCGGAAACCGGAGCCGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SRPQVPGNAGACRAW*AATRRPGNRSREPG
Trigger: GCCTGGCTCCCGGCTCCGGTTTCCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS-3UTR CAA 90 bp GCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: ARSGLEVQGITLQRWEASWKCWC*PGMVSG
Trigger: GCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCA...GCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCATTGAGGTTCCAGTCATaGGGGCCTCGGGCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPLRFQS*GPRAPQ
Trigger: CTGCGGAGCCCGAGGCCCCAATGACTGGAACCTCAA...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCAGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPVFHSR*ARSGLE
Trigger: CTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACAC...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS GCA 90 bp AAGTATTTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATGCTGGTaGTTGCCGGGCATGGTGAGCGGCCACCCGCCGGCCCGGAAACCG +
Preference number: 5 (lower is better)
Translates to: KYFPQQPTSGSWKCW*LPGMVSGHPPARKP
Trigger: CGGTTTCCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS GCA 90 bp AACAGGAAGTATTTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATGGTGAGCGGCCACCCGCCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NRKYFPQQPTSGSWK*WCLPGMVSGHPPAR
Trigger: CCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATACTTCCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS GCA 90 bp GCTGGGCCAAGCCCTGTGGCAGCAGAGACCGCTGGGCCCCATGTCTaGAGCAGGCCTCCCACACTTGCCCCAGAGGTTCTACAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: AGPSPVAAETAGPHV*SRPPTLAPEVLQSP
Trigger: AGGGCTTTGTAGAACCTCTGGGGCAAGTGTGGGAGGCCTGCTGCAGACATGGGGCCCAGCGGTCTCTGCTGCCACAGGGCTTGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 90 bp AGGGGCTGGCTCTCCTCGGACGAGGACACTCCTGGGTCTCTCTCCTaGGGCCCGCTAGCCCAGGTGGGTAAGGAGATGGTCCCATCACAG +
Preference number: 5 (lower is better)
Translates to: RGWLSSDEDTPGSLS*GPLAQVGKEMVPSQ
Trigger: CTGTGATGGGACCATCTCCTTACCCACCTGGGCTAGCGGGCCCCAGGAGAGAGACCCAGGAGTGTCCTCGTCCGAGGAGAGCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp CCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: PGSVGLACPLVPIRQLCSVFHSR*ARSGLE
Trigger: CTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACAC...GCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCAGGGGCATCGGAGTTaGAGATCTCTGGACGAGCCC +
Preference number: 5 (lower is better)
Translates to: PQRPRGAGNNPAEVGGQLQGHRS*RSLDEP
Trigger: GGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCTG...GAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS CCA 90 bp AGGAAGTATTTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATGCTaGTGCTTGCCGGGCATGGTGAGCGGCCACCCGCCGGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: RKYFPQQPTSGSWKC*CLPGMVSGHPPARK
Trigger: TTTCCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATACTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS-3UTR CAA 90 bp GGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTGTGGCCCACGCAGCCTTaGGTGTGGATGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GCTLFKAGSSLSILQVPVWPTQP*VWMKPC
Trigger: GCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCA...CACGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCCAGGGGCATCGGAGTTaGAGATCTCTGGACGAGCCC +
Preference number: 5 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCQGHRS*RSLDEP
Trigger: GGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCTG...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCGGCCAAGGAGCCACATaGCTGGGCACATGCCCCATA +
Preference number: 5 (lower is better)
Translates to: PGSVGLACPLVPIRQLCSGQGAT*LGTCPI
Trigger: TATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCC...GCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS TCA 90 bp GGGGCACGTGGGGCCACAAGGGTACCTGGAGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAATCAGGTTGTCCTGCAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: GARGATRVPGGGRCP*RLPPPQSGCPAATS
Trigger: AGAAGTGGCTGCAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCCACGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS GCA 90 bp GAGTTTGGGATCTGCCATGAACCATGGTCTTGTGGGGCACACGGGTaGACACAGCCCTCACTGAGCAGCAGCGCAGGGGCTGGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: EFGICHEPWSCGAHG*TQPSLSSSAGAGEQ
Trigger: CTGCTCTCCAGCCCCTGCGCTGCTGCTCAGTGAGGGCTGTGTGCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGATCCCAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 90 bp AGGCCCATCCCAGGAGCCTCACCCTGTTTGGGAACAAGCCCAGGCTaGAGGAATACAGGGCTGTCTGGGACAGGGCTGGGACAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: RPIPGASPCLGTSPG*RNTGLSGTGLGQPS
Trigger: ACTTGGCTGTCCCAGCCCTGTCCCAGACAGCCCTGTATTCCTGCAGCCTGGGCTTGTTCCCAAACAGGGTGAGGCTCCTGGGATGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 90 bp AAGCCAAACAGGAAGTATTTCCCGCAGCAGCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCGGGCATGGTGAGCGGCCACCCGCCG +
Preference number: 5 (lower is better)
Translates to: KPNRKYFPQQPTSGS*KCWCLPGMVSGHPP
Trigger: CGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS-3UTR CAA 90 bp TTCCCAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCTGGCCCACGCAGCCTTaGGTGTGGATGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FPGCTLFKAGSSLSILQVWPTQP*VWMKPC
Trigger: GCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCA...GACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGGCCACCCGGCAGCAGTGCCCAGCATCCCTCAATGACAGAGCAGCCAGGACCGCCACCACAATCAGGTaGTCCTGCAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: LATRQQCPASLNDRAARTATTIR*SCSHFS
Trigger: TGAGAAGTGGCTGCAGGACAACCTGATTGTGGTGGC...GGTCCTGGCTGCTCTGTCATTGAGGGATGCTGGGCACTGCTGCCGGGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS GCA 90 bp CCGCTAGCCCAGGTGGGTAAGGAGATGGTCCCATCACAGGGAACTTaGTCCCTCATTCGTCTGCCAGGAAGGCGCCTCCTACAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PLAQVGKEMVPSQGT*SLIRLPGRRLLQVS
Trigger: GGACACCTGTAGGAGGCGCCTTCCTGGCAGACGAATGAGGGAGCAAGTTCCCTGTGATGGGACCATCTCCTTACCCACCTGGGCTAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 90 bp ATGCCCTCTGTTTCCCAAGGCCGTGGCCCTATGGCACTAGGCAAATaGGGACCCATAAGGATCAGCAGGGGCTGGCTCTCCTCGGACGAG +
Preference number: 5 (lower is better)
Translates to: MPSVSQGRGPMALGK*GPIRISRGWLSSDE
Trigger: CTCGTCCGAGGAGAGCCAGCCCCTGCTGATCCTTATGGGTCCCCATTTGCCTAGTGCCATAGGGCCACGGCCTTGGGAAACAGAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp TGCGGGAGGAAGCCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCGCCTTGACGTTGTTGTaGATGAAGAGGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CGRKPDPGSVGLACPLVPALTLL*MKRLSW
Trigger: CCAGCTCAACCTCTTCATCAACAACAACGTCAAGGC...GGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGGCTTCCTCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GCGATGCCCATGAAGACTCCCGCCACCACAATCAGGTTGTCCTGCAGCCACTTCTGGCCCACGCAGCCTTaGGTGTGGATGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AMPMKTPATTIRLSCSHFWPTQP*VWMKPC
Trigger: GCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCA...GAAGTGGCTGCAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp TCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTAGTGTCCCAGGTAGTGTaGCCACCGAAGAGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: STIQIPQTGSRQSHGFQLVSQVV*PPKSRR
Trigger: ACGCCGGCTCTTCGGTGGCAACACTACCTGGGACAC...TAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCCCAAGCCTGAGCCAGTaGGCTCTGAGAAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: DPGSVGLACPLVPIRQLCPSLSQ*ALRNSQ
Trigger: TTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGG...GCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCACAGGGGCATCGGAGTTaGAGATCTCTGGACGAGCCC +
Preference number: 5 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPQGHRS*RSLDEP
Trigger: GGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCTG...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCACTCATCACGATGTCTTaGTCTCCAGCAACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPLITMS*SPATVG
Trigger: TCCCACTGTTGCTGGAGACAAAGACATCGTGATGAG...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TTCCCAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCGGCCAAGGAGCCACATaGCTGGGCACATGCCCCATA +
Preference number: 5 (lower is better)
Translates to: FPGCTLFKAGSSLSILQVGQGAT*LGTCPI
Trigger: TATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCC...GACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS GCA 90 bp ACCCTAAGCTGTCCCCTAGGCAGGAGCAATGGCGAGTTTGGGATCTaGCATGAACCATGGTCTTGTGGGGCACACGGGTGCACACAGCCC +
Preference number: 5 (lower is better)
Translates to: TLSCPLGRSNGEFGI*HEPWSCGAHGCTQP
Trigger: GGGCTGTGTGCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGATCCCAAACTCGCCATTGCTCCTGCCTAGGGGACAGCTTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp TGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTCCTTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: CVHTHMGQEAQAEAQQLPWKCWC*PGMVSG
Trigger: GCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCA...AGGAAGTTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS-3UTR CAA 90 bp CTGCTGAGGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTGTCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LLRPRRGQDLGNGGRKPVSRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...CACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000503030.1
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCAGGACACTGGCCAGCGGGGCCAAGGAGCCACATTGCTGGGCACATGCCCCATTGTTGATGAAGAGGTaGAGCTGGTCTCGAATCCAG +
Preference number: 5 (lower is better)
Translates to: PRTLASGAKEPHCWAHAPLLMKR*SWSRIQ
Trigger: CTGGATTCGAGACCAGCTCAACCTCTTCATCAACAA...TGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCCCCGCTGGCCAGTGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTTTTGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: PDPPNRLPPVPWLPATSFVFHSR*ARSGLE
Trigger: CTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACAC...AAAAGAAGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTACCAAGCCTGAGCCAGTaGGCTCTGAGAAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLPSLSQ*ALRNSQ
Trigger: TTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGG...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTCAGGGGCATCGGAGTTaGAGATCTCTGGACGAGCCC +
Preference number: 5 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIQGHRS*RSLDEP
Trigger: GGGCTCGTCCAGAGATCTCAAACTCCGATGCCCCTG...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS TCA 90 bp TGCTTGAAGCAGGCACCAGCTCTGCTTCACCTCTGGATCCAGAGCTaGCTCTTGGTGGTGAATGGTGCCAAGGGCCTGTCGCCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CLKQAPALLHLWIQS*LLVVNGAKGLSPCV
Trigger: CACACACGGCGACAGGCCCTTGGCACCATTCACCACCAAGAGTCAGCTCTGGATCCAGAGGTGAAGCAGAGCTGGTGCCTGCTTCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 90 bp AAGCTGTCCCCTAGGCAGGAGCAATGGCGAGTTTGGGATCTGCCATaGACCATGGTCTTGTGGGGCACACGGGTGCACACAGCCCTCACT +
Preference number: 5 (lower is better)
Translates to: KLSPRQEQWRVWDLP*TMVLWGTRVHTALT
Trigger: AGTGAGGGCTGTGTGCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGATCCCAAACTCGCCATTGCTCCTGCCTAGGGGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 90 bp GTAAGGAGATGGTCCCATCACAGGGAACTTGCTCCCTCATTCGTCTaGCAGGAAGGCGCCTCCTACAGGTGTCCCAGGCTGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: VRRWSHHRELAPSFV*QEGASYRCPRLDTG
Trigger: TCCAGTGTCCAGCCTGGGACACCTGTAGGAGGCGCCTTCCTGGCAGACGAATGAGGGAGCAAGTTCCCTGTGATGGGACCATCTCCTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTATCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLSRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGCCTTGACGTTGTTGTaGATGAAGAGGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLALTLL*MKRLSW
Trigger: CCAGCTCAACCTCTTCATCAACAACAACGTCAAGGC...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AAGCCTGAGCCAGTTGGCTCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGTGGCCCACGCAGCCTTaGGTGTGGATGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: KPEPVGSEKFPNSPNPRAWPTQP*VWMKPC
Trigger: GCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCA...CGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTCCCCACCGCACTCTCTaGGTCTCAAGGAAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATPHRTL*VSRKVA
Trigger: AGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGGG...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTCCCCACCGCACTCTCTaGGTCTCAAGGAAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIPHRTL*VSRKVA
Trigger: AGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGGG...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTGGGTCCTGCACCTTGTTaGGCCTGCAGATTTGATTTC +
Preference number: 5 (lower is better)
Translates to: GCTLFKAGSSLSILQVPVGPAPC*ACRFDF
Trigger: GAAATCAAATCTGCAGGCCAAACAAGGTGCAGGACC...CACGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TTGACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCTGGCGGCCTCACCAGTaGGCTTTCACTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LTPRSQPSRSPKQAPASPWRPHQ*AFTALM
Trigger: CATCAAGGCAGTGAAAGCCAACTGGTGAGGCCGCCA...GGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS CCA 90 bp CGTCTGCCAGGAAGGCGCCTCCTACAGGTGTCCCAGGCTGGACACTaGACTCACGTATTCCTGAGCAAAGTCAATGAGGTTCTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: RLPGRRLLQVSQAGH*THVFLSKVNEVLEV
Trigger: GACCTCCAGAACCTCATTGACTTTGCTCAGGAATACGTGAGTCCAGTGTCCAGCCTGGGACACCTGTAGGAGGCGCCTTCCTGGCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 90 bp GGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTCCATTTGCTCGAGGTTCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GPAVDRTSEMVGVSQ*FSKSSFHLLEVLGQ
Trigger: CTGGCCCAGAACCTCGAGCAAATGGAATGATGACTTTGAAAACCACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515708.5
CDS-3UTR CAA 90 bp GAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: EVELVSNPVLEDKGQDPCWKCWC*PGMVSG
Trigger: GCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCA...ACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp CGGAGGGCCCCAATGCAGCCAGCAAAGCCCAGCACCGACATGACGCCTCCAACTAACACGGAGAAAAACTaGAGCAGGAAGGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRAPMQPAKPSTDMTPPTNTEKN*SRKVFS
Trigger: GGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTT...AGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp CCATCCTTCAGGTCCCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGAACACGGAGAAAAACTaGAGCAGGAAGGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSFRSPCFTPDWPAAASRNTEKN*SRKVFS
Trigger: GGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTT...CCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGGGACCTGAAGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTGTTGTTGATGAAGAGGTaGAGCTGGTCTCGAATCCAG +
Preference number: 5 (lower is better)
Translates to: GCTLFKAGSSLSILQVPVLLMKR*SWSRIQ
Trigger: CTGGATTCGAGACCAGCTCAACCTCTTCATCAACAA...CACGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTGCCACCACAATCAGGTaGTCCTGCAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQIATTIR*SCSHFS
Trigger: TGAGAAGTGGCTGCAGGACAACCTGATTGTGGTGGC...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCAAGTCATCATTCCATTaGCTCCAGTTGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: PQRPRGAGNNPAEVGGQLKSSFH*LQLAFT
Trigger: AGTGAAAGCCAACTGGAGCAAATGGAATGATGACTT...GAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310032.12
ENST00000508164.6
CDS-3UTR CAA 90 bp TGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCGTGTCCCAGGTAGTGTaGCCACCGAAGAGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: CIYCSMYKPLTASACQGPVSQVV*PPKSRR
Trigger: ACGCCGGCTCTTCGGTGGCAACACTACCTGGGACAC...GGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCAGACCCAGGGAGTGTGGGGCTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTTCCAGCTACTTCTTTaGCAAAATTGTCCTGACCCC +
Preference number: 5 (lower is better)
Translates to: PDPGSVGLACPLVPIRQLFQLLL*QNCPDP
Trigger: GGGGTCAGGACAATTTTGCAAAAGAAGTAGCTGGAA...GAGCTGCCTGATGGGCACTAGAGGGCATGCCAGCCCCACACTCCCTGGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TTCCCAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCAAGCCTGAGCCAGTaGGCTCTGAGAAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: FPGCTLFKAGSSLSILQVPSLSQ*ALRNSQ
Trigger: TTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGG...GACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GACCTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGGGTCCTGCACCTTGTTaGGCCTGCAGATTTGATTTC +
Preference number: 5 (lower is better)
Translates to: DLQGHGAKAGSCTLFGLQGPAPC*ACRFDF
Trigger: GAAATCAAATCTGCAGGCCAAACAAGGTGCAGGACC...CTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTACATCTCCTGCAGCCTaGCCCGTCAGGAGTATAGTA +
Preference number: 5 (lower is better)
Translates to: LACPLVPIRQLCSHGEDATSPAA*PVRSIV
Trigger: TACTATACTCCTGACGGGCAAGGCTGCAGGAGATGT...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS TCA 90 bp GAATGGTGCCAAGGGCCTGTCGCCGTGTGTGGGTGTGATCGGGTGTaGCTCATGTGTGACTGTGGGACCATGTGTAGGTGTAGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: EWCQGPVAVCGCDRV*LMCDCGTMCRCRCD
Trigger: ATCACACCTACACCTACACATGGTCCCACAGTCACACATGAGTCACACCCGATCACACCCACACACGGCGACAGGCCCTTGGCACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTTCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LACPLVPIRQLCSHGEDASRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCTTGTTGATGAAGAGGTaGAGCTGGTCTCGAATCCAG +
Preference number: 5 (lower is better)
Translates to: PVFHSRLARSGLEVQGITLLMKR*SWSRIQ
Trigger: CTGGATTCGAGACCAGCTCAACCTCTTCATCAACAA...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTGCCTTGACGTTGTTGTaGATGAAGAGGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LACPLVPIRQLCSHGEDAALTLL*MKRLSW
Trigger: CCAGCTCAACCTCTTCATCAACAACAACGTCAAGGC...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGCTGAGGCCCCGCCGTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTGAAGTCATCATTCCATTaGCTCCAGTTGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: LLRPRRGQDLGNGGRKPVKSSFH*LQLAFT
Trigger: AGTGAAAGCCAACTGGAGCAAATGGAATGATGACTT...CACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCACGGCGGGGCCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp CAGGCTGCACCCTCTTCAAAGCGGGGTCCAGCCTCTCCATCCTTCAGGTCCCCGTTCCAGCTACTTCTTTaGCAAAATTGTCCTGACCCC +
Preference number: 5 (lower is better)
Translates to: QAAPSSKRGPASPSFRSPFQLLL*QNCPDP
Trigger: GGGGTCAGGACAATTTTGCAAAAGAAGTAGCTGGAA...CGGGGACCTGAAGGATGGAGAGGCTGGACCCCGCTTTGAAGAGGGTGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CAGCGGCCTCGAGGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTACTGTTACCGACTAGATaGTGCGAACTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: QRPRGAGNNPAEVGGQLLLLPTR*CELSLI
Trigger: GATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAG...TAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACCTCGAGGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGCTAGTAGGCAGGCACAGGCCCCACCGCACTCTCTaGGTCTCAAGGAAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SEKFPNSPNPRALVGRHRPHRTL*VSRKVA
Trigger: AGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGGG...CCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS TCA 90 bp GAACTGCATCATAACTGCCTGGCTATGTCTGCCTCTGCCCTGGGTTaGGAGCTGCTTGAAGCAGGCACCAGCTCTGCTTCACCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: ELHHNCLAMSASALG*ELLEAGTSSASPLD
Trigger: ATCCAGAGGTGAAGCAGAGCTGGTGCCTGCTTCAAGCAGCTCTCAACCCAGGGCAGAGGCAGACATAGCCAGGCAGTTATGATGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIWKCWC*PGMVSG
Trigger: GCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCA...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GGTGCAGGGAATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTTCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: GAGNNPAEVGGQLLVYKGSRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...ACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATTCCCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTTCTCGAATCCAGTCCTaGAAGACAAAGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATSRIQS*KTKARI
Trigger: GATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCTTCCATTTGCTCCAGTaGGCTTTCACTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: RSQPSRSPKQAPASPMASFHLLQ*AFTALM
Trigger: CATCAAGGCAGTGAAAGCCAACTGGAGCAAATGGAA...GGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310032.12
ENST00000508164.6
CDS-3UTR CAA 90 bp GGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCATTCCATTTGCTCCAGTaGGCTTTCACTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GVNHPDPPNRLPPVPWLPFHLLQ*AFTALM
Trigger: CATCAAGGCAGTGAAAGCCAACTGGAGCAAATGGAA...TGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310032.12
ENST00000508164.6
CDS-3UTR CAA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGTGTCCCAGGTAGTGTaGCCACCGAAGAGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIVSQVV*PPKSRR
Trigger: ACGCCGGCTCTTCGGTGGCAACACTACCTGGGACAC...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GCAGTGTCCCAGGTAGTGTTGCCACCGAAGAGCCGGCGTAGCCAGGTGGTCATTGTGAAGATGCTGAACTaGACTCCTAGGAGTCAACCA +
Preference number: 5 (lower is better)
Translates to: AVSQVVLPPKSRRSQVVIVKMLN*TPRSQP
Trigger: TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCAC...AATGACCACCTGGCTACGCCGGCTCTTCGGTGGCAACACTACCTGGGACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCACTCATCACGATGTCTTaGTCTCCAGCAACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAALITMS*SPATVG
Trigger: TCCCACTGTTGCTGGAGACAAAGACATCGTGATGAG...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTACAGGGGCATGGGGCCAAAGCTGGGTCCTGCACCTTGTTTGGCCTGCAGATTCTCATCACGATGTCTTaGTCTCCAGCAACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LQGHGAKAGSCTLFGLQILITMS*SPATVG
Trigger: TCCCACTGTTGCTGGAGACAAAGACATCGTGATGAG...AATCTGCAGGCCAAACAAGGTGCAGGACCCAGCTTTGGCCCCATGCCCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCGTGTTTCACTCCAGATTGGCCCGCAGCGGCCTCGAGGTGCAGGGAATAACCCTGTTACCGACTAGATaGTGCGAACTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: PVFHSRLARSGLEVQGITLLPTR*CELSLI
Trigger: GATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAG...GGTTATTCCCTGCACCTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp ACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGGTCCTGCACCTTGTTaGGCCTGCAGATTTGATTTC +
Preference number: 5 (lower is better)
Translates to: TPRSQPSRSPKQAPASPMGPAPC*ACRFDF
Trigger: GAAATCAAATCTGCAGGCCAAACAAGGTGCAGGACC...CATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCAAGGAGCCACATaGCTGGGCACATGCCCCATA +
Preference number: 5 (lower is better)
Translates to: PAAFIVACTNHSQPAPVRGQGAT*LGTCPI
Trigger: TATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCC...CCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TTGACTCCTAGGAGTCAACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCAAGTCATCATTCCATTaGCTCGAGGTTCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LTPRSQPSRSPKQAPASPKSSFH*LEVLGQ
Trigger: CTGGCCCAGAACCTCGAGCAAATGGAATGATGACTT...GGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTTGACTCCTAGGAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515708.5
CDS-3UTR CAA 90 bp GGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCAAGCATCCAGACCTCCTaGCCCGGAGCCCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GLKESGCYRLDCANFLSSSIQTS*PGALLS
Trigger: GGACAGCAGGGCTCCGGGCAAGGAGGTCTGGATGCT...TGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310032.12
CDS-3UTR CAA 90 bp AACCATCCAGATCCCCCAAACAGGCTCCCGCCAGTCCCATGGCTTCCAGCTACTAACACGGAGAAAAACTaGAGCAGGAAGGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NHPDPPNRLPPVPWLPATNTEKN*SRKVFS
Trigger: GGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTT...AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATCTGGATGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AATAACCCTGCAGAGGTGGGAGGCCAGCTCCTAGTGTACAAGGGTCAGGCGGCATTGTTGATGAAGAGGTaGAGCTGGTCTCGAATCCAG +
Preference number: 5 (lower is better)
Translates to: NNPAEVGGQLLVYKGQAALLMKR*SWSRIQ
Trigger: CTGGATTCGAGACCAGCTCAACCTCTTCATCAACAA...TGCCGCCTGACCCTTGTACACTAGGAGCTGGCCTCCCACCTCTGCAGGGTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGTATTTCTGGCTTCTCCAGATTTCTGTCATTAGGCCTGCATTCCCACACCAGTTGAGGTTCCAGTCATaGGGGCCTCGGGCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LYFWLLQISVIRPAFPHQLRFQS*GPRAPQ
Trigger: CTGCGGAGCCCGAGGCCCCAATGACTGGAACCTCAA...CTGGTGTGGGAATGCAGGCCTAATGACAGAAATCTGGAGAAGCCAGAAATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCGCCACCACAATCAGGTaGTCCTGCAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: CIYCSMYKPLTASACQGPATTIR*SCSHFS
Trigger: TGAGAAGTGGCTGCAGGACAACCTGATTGTGGTGGC...GGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGTTTGAGATCGTGTTTCACTCCAGATaGGCCCGCAGCGGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: VSSIYTTYVAPGASEFEIVFHSR*ARSGLE
Trigger: CTCGAGGCCGCTGCGGGCCAATCTGGAGTGAAACAC...GATCTCAAACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTGGCATGCCCTCTAGTGCCCATCAGGCAGCTCTGCAGCCACGGTGAAGATGCTCTGTTACCGACTAGATaGTGCGAACTTTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: LACPLVPIRQLCSHGEDALLPTR*CELSLI
Trigger: GATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAG...AGCATCTTCACCGTGGCTGCAGAGCTGCCTGATGGGCACTAGAGGGCATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TCTCTTGGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTGGCCCACGCAGCCTTaGGTGTGGATGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SLGLKESGCYRLDCANFLWPTQP*VWMKPC
Trigger: GCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCA...GAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp AGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTGCCACCACAATCAGGTaGTCCTGCAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: RLSWSRIQSLKTKARIPVATTIR*SCSHFS
Trigger: TGAGAAGTGGCTGCAGGACAACCTGATTGTGGTGGC...AACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp AACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCCCCCACCGCACTCTCTaGGTCTCAAGGAAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NSRACFIHLYNIRGPRGIPHRTL*VSRKVA
Trigger: AGCCACTTTCCTTGAGACCAAGAGAGTGCGGTGGGG...GATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTGCCTTGACGTTGTTGTaGATGAAGAGGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EVELVSNPVLEDKGQDPCALTLL*MKRLSW
Trigger: CCAGCTCAACCTCTTCATCAACAACAACGTCAAGGC...ACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTTTGAGGTTCCAGTCATaGGGGCCTCGGGCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLLRFQS*GPRAPQ
Trigger: CTGCGGAGCCCGAGGCCCCAATGACTGGAACCTCAA...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGAGGCCAAGGAGCCACATaGCTGGGCACATGCCCCATA +
Preference number: 5 (lower is better)
Translates to: LKESGCYRLDCANFLSSRGQGAT*LGTCPI
Trigger: TATGGGGCATGTGCCCAGCAATGTGGCTCCTTGGCC...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGACAAAGGCCAGGATCCCTGTTTCCATTTGCTCCAGTaGGCTTTCACTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: EVELVSNPVLEDKGQDPCFHLLQ*AFTALM
Trigger: CATCAAGGCAGTGAAAGCCAACTGGAGCAAATGGAA...ACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp TCTGAGAAATTCCCAAACTCTCCGAACCCCAGAGCGCTAGTAGGCAGGCACAGGTTCCAGCTACTTCTTTaGCAAAATTGTCCTGACCCC +
Preference number: 5 (lower is better)
Translates to: SEKFPNSPNPRALVGRHRFQLLL*QNCPDP
Trigger: GGGGTCAGGACAATTTTGCAAAAGAAGTAGCTGGAA...CCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTTTGGGAATTTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCCAACTCAAGGGCCTGTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCGTGAAGATGCTGAACTaGACTCCTAGGAGTCAACCA +
Preference number: 5 (lower is better)
Translates to: PNSRACFIHLYNIRGPRGVKMLN*TPRSQP
Trigger: TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCAC...GCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAACAGGCCCTTGAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CCGGTAGGCCTTGACGTTGTTGTTGATGAAGAGGTTGAGCTGGTCTCGAATCCATTGTTGATGAAGAGGTaGAGCTGGTCTCGAATCCAG +
Preference number: 5 (lower is better)
Translates to: PVGLDVVVDEEVELVSNPLLMKR*SWSRIQ
Trigger: CTGGATTCGAGACCAGCTCAACCTCTTCATCAACAA...TGGATTCGAGACCAGCTCAACCTCTTCATCAACAACAACGTCAAGGCCTACCGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503030.1
CDS-3UTR CAA 90 bp CCAGCTGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGTGAAGATGCTGAACTaGACTCCTAGGAGTCAACCA +
Preference number: 5 (lower is better)
Translates to: PAAFIVACTNHSQPAPVRVKMLN*TPRSQP
Trigger: TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCAC...CCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298564.14
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGTTTGAGATCGCCTTGACGTTGTTGTaGATGAAGAGGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSSIYTTYVAPGASEFEIALTLL*MKRLSW
Trigger: CCAGCTCAACCTCTTCATCAACAACAACGTCAAGGC...GATCTCAAACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp TGCATTTATTGTAGCATGTACAAACCACTCACAGCCAGCGCCTGTCAGGGGCCCAAGTCATCATTCCATTaGCTCCAGTTGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: CIYCSMYKPLTASACQGPKSSFH*LQLAFT
Trigger: AGTGAAAGCCAACTGGAGCAAATGGAATGATGACTT...GGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAATAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508164.6
CDS-3UTR CAA 90 bp GGTCTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACCAAGCCTGAGCCAGTaGGCTCTGAGAAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: GLKESGCYRLDCANFLSSPSLSQ*ALRNSQ
Trigger: TTGGGAATTTCTCAGAGCCAACTGGCTCAGGCTTGG...TGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GTTTCATCCATTTATACAACATACGTGGCCCCAGGGGCATCGGAGTTTGAGATCCTCATCACGATGTCTTaGTCTCCAGCAACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: VSSIYTTYVAPGASEFEILITMS*SPATVG
Trigger: TCCCACTGTTGCTGGAGACAAAGACATCGTGATGAG...GATCTCAAACTCCGATGCCCCTGGGGCCACGTATGTTGTATAAATGGATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTCAAGGAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGAGGTCCTGCACCTTGTTaGGCCTGCAGATTTGATTTC +
Preference number: 5 (lower is better)
Translates to: LKESGCYRLDCANFLSSRGPAPC*ACRFDF
Trigger: GAAATCAAATCTGCAGGCCAAACAAGGTGCAGGACC...TCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTCCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp CTCTCATCACGATGTCTTTGTCTCCAGCAACAGTGGGAAAGTCAAAGTGAAGCAGTGAAGATGCTGAACTaGACTCCTAGGAGTCAACCA +
Preference number: 5 (lower is better)
Translates to: LSSRCLCLQQQWESQSEAVKMLN*TPRSQP
Trigger: TGGTTGACTCCTAGGAGTCAAGTTCAGCATCTTCAC...TGCTTCACTTTGACTTTCCCACTGTTGCTGGAGACAAAGACATCGTGATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS-3UTR CAA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTAACACGGAGAAAAACTaGAGCAGGAAGGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLNTEKN*SRKVFS
Trigger: GGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTT...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310032.12
ENST00000508164.6
ENST00000515708.5
CDS TCA 90 bp TCAAGCTCTCCACGCAGAGGCCTTCCCATTCTCCACCCTTCATTTTaGCTCTTACCACAATGTACAATTTTGCATACACACGTATGTACA +
Preference number: 5 (lower is better)
Translates to: SSSPRRGLPILHPSF*LLPQCTILHTHVCT
Trigger: TGTACATACGTGTGTATGCAAAATTGTACATTGTGGTAAGAGTCAAAATGAAGGGTGGAGAATGGGAAGGCCTCTGCGTGGAGAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS-3UTR CAA 90 bp GAAAGTGGCTGTTACCGACTAGATTGTGCGAACTTTCTCTCATCACGATGTCTTAAGTCATCATTCCATTaGCTCCTGAGAGGCAAGCAA +
Preference number: 5 (lower is better)
Translates to: ESGCYRLDCANFLSSRCLKSSFH*LLRGKQ
Trigger: TTGCTTGCCTCTCAGGAGCAAATGGAATGATGACTT...AAGACATCGTGATGAGAGAAAGTTCGCACAATCTAGTCGGTAACAGCCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS TCA 72 bp CAGGTTCCTGGAAATGCTGGTGCTTGCCGGGCATGGTaGGCGGCCACCCGCCGGCCCGGAAACCGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: QVPGNAGACRAW*AATRRPGNRSR
Trigger: CCGGCTCCGGTTTCCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS CAA 72 bp CAGCAGCCGACCTCAGGTTCCTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGCCACCCGCCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: QQPTSGSWKCWC*PGMVSGHPPAR
Trigger: CCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS CCA 72 bp TTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATGCTaGTGCTTGCCGGGCATGGTGAGCGGCCACCCGCCG +
Preference number: 6 (lower is better)
Translates to: FPQQPTSGSWKC*CLPGMVSGHPP
Trigger: CGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS CAA 90 bp TATTTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATGCTGGTGCTaGCCGGGCATGGTGAGCGGCCACCCGCCGGCCCGGAAACCGGAG +
Preference number: 6 (lower is better)
Translates to: YFPQQPTSGSWKCWC*PGMVSGHPPARKPE
Trigger: CTCCGGTTTCCGGGCCGGCGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS GCA 72 bp CCAGAGAGCTGGAGGAGTCAGGCCTGCCACATGCCCTaGATGTGCTGGTCCCAGGGCAGGGCTCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: PESWRSQACHMP*MCWSQGRAQPP
Trigger: TGGAGGCTGAGCCCTGCCCTGGGACCAGCACATGCAGGGCATGTGGCAGGCCTGACTCCTCCAGCTCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp CTCTCCTCGGACGAGGACACTCCTGGGTCTCTCTCCTaGGGCCCGCTAGCCCAGGTGGGTAAGGAGATGGTC +
Preference number: 6 (lower is better)
Translates to: LSSDEDTPGSLS*GPLAQVGKEMV
Trigger: GACCATCTCCTTACCCACCTGGGCTAGCGGGCCCCAGGAGAGAGACCCAGGAGTGTCCTCGTCCGAGGAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 72 bp TATTTCCCGCAGCAGCCGACCTCAGGTTCCTGGAAATaGTGGTGCTTGCCGGGCATGGTGAGCGGCCACCCG +
Preference number: 6 (lower is better)
Translates to: YFPQQPTSGSWK*WCLPGMVSGHP
Trigger: CGGGTGGCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS TCA 72 bp CCACACGGGGTCAAGGCCTCCCAGATCTGTCAGCGCTaGGATGTTCGAGAGAACGCCCTTCTCACCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PHGVKASQICQR*DVRENALLTPG
Trigger: GCCTGGGGTGAGAAGGGCGTTCTCTCGAACATCTCAGCGCTGACAGATCTGGGAGGCCTTGACCCCGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS TCA 72 bp GGGGCCACAAGGGTACCTGGAGGAGGGCGATGCCCATaGAGACTCCCGCCACCACAATCAGGTTGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: GATRVPGGGRCP*RLPPPQSGCPA
Trigger: TGCAGGACAACCTGATTGTGGTGGCGGGAGTCTTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298564.14
CDS GCA 72 bp ATCTGCCATGAACCATGGTCTTGTGGGGCACACGGGTaGACACAGCCCTCACTGAGCAGCAGCGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: ICHEPWSCGAHG*TQPSLSSSAGA
Trigger: AGCCCCTGCGCTGCTGCTCAGTGAGGGCTGTGTGCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 72 bp TGGTCCCATCACAGGGAACTTGCTCCCTCATTCGTCTaGCAGGAAGGCGCCTCCTACAGGTGTCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: WSHHRELAPSFV*QEGASYRCPRL
Trigger: CAGCCTGGGACACCTGTAGGAGGCGCCTTCCTGGCAGACGAATGAGGGAGCAAGTTCCCTGTGATGGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 72 bp CCTCTGGATCCAGAGCTGACTCTTGGTGGTGAATGGTaGCAAGGGCCTGTCGCCGTGTGTGGGTGTGATCGG +
Preference number: 6 (lower is better)
Translates to: PLDPELTLGGEW*QGPVAVCGCDR
Trigger: CCGATCACACCCACACACGGCGACAGGCCCTTGGCACCATTCACCACCAAGAGTCAGCTCTGGATCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp AGGAAGTATTTCCCGCAGCAGCCGACCTCAGGTTCCTaGAAATGCTGGTGCTTGCCGGGCATGGTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: RKYFPQQPTSGS*KCWCLPGMVSG
Trigger: GCCGCTCACCATGCCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTGCTGCGGGAAATACTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298564.14
ENST00000310032.12
ENST00000503030.1
ENST00000503045.5
ENST00000504168.5
ENST00000508164.6
ENST00000514705.5
ENST00000515708.5
CDS CCA 72 bp CTAGGCAAATGGGGACCCATAAGGATCAGCAGGGGCTaGCTCTCCTCGGACGAGGACACTCCTGGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: LGKWGPIRISRG*LSSDEDTPGSL
Trigger: GAGAGACCCAGGAGTGTCCTCGTCCGAGGAGAGCCAGCCCCTGCTGATCCTTATGGGTCCCCATTTGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp GTTTCCCAAGGCCGTGGCCCTATGGCACTAGGCAAATaGGGACCCATAAGGATCAGCAGGGGCTGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: VSQGRGPMALGK*GPIRISRGWLS
Trigger: GGAGAGCCAGCCCCTGCTGATCCTTATGGGTCCCCATTTGCCTAGTGCCATAGGGCCACGGCCTTGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CAGGCACCAGCTCTGCTTCACCTCTGGATCCAGAGCTaGCTCTTGGTGGTGAATGGTGCCAAGGGCCTGTCG +
Preference number: 6 (lower is better)
Translates to: QAPALLHLWIQS*LLVVNGAKGLS
Trigger: CGACAGGCCCTTGGCACCATTCACCACCAAGAGTCAGCTCTGGATCCAGAGGTGAAGCAGAGCTGGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp GGCTATGTCTGCCTCTGCCCTGGGTTGAGAGCTGCTTaGAGCAGGCACCAGCTCTGCTTCACCTCTGGATCC +
Preference number: 6 (lower is better)
Translates to: GYVCLCPGLRAA*SRHQLCFTSGS
Trigger: GGATCCAGAGGTGAAGCAGAGCTGGTGCCTGCTTCAAGCAGCTCTCAACCCAGGGCAGAGGCAGACATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 72 bp TGTCCCCTAGGCAGGAGCAATGGCGAGTTTGGGATCTaGCATGAACCATGGTCTTGTGGGGCACACGGGTGC +
Preference number: 6 (lower is better)
Translates to: CPLGRSNGEFGI*HEPWSCGAHGC
Trigger: GCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGATCCCAAACTCGCCATTGCTCCTGCCTAGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CAAGGGCCTGTCGCCGTGTGTGGGTGTGATCGGGTGTaGCTCATGTGTGACTGTGGGACCATGTGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: QGPVAVCGCDRV*LMCDCGTMCRC
Trigger: ACACCTACACATGGTCCCACAGTCACACATGAGTCACACCCGATCACACCCACACACGGCGACAGGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CTTGTTCACCATCTGTCTCTTCCCGACTGCCAGCCCTaGGAGGACAGGTCCCAGCTTTCTTCCCCGCCGAAT +
Preference number: 6 (lower is better)
Translates to: LVHHLSLPDCQP*EDRSQLSSPPN
Trigger: ATTCGGCGGGGAAGAAAGCTGGGACCTGTCCTCTCAGGGCTGGCAGTCGGGAAGAGACAGATGGTGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CCTAGGCAGGAGCAATGGCGAGTTTGGGATCTGCCATaGACCATGGTCTTGTGGGGCACACGGGTGCACACA +
Preference number: 6 (lower is better)
Translates to: PRQEQWRVWDLP*TMVLWGTRVHT
Trigger: TGTGTGCACCCGTGTGCCCCACAAGACCATGGTTCATGGCAGATCCCAAACTCGCCATTGCTCCTGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS GCA 72 bp CAGGTGGGTAAGGAGATGGTCCCATCACAGGGAACTTaGTCCCTCATTCGTCTGCCAGGAAGGCGCCTCCTA +
Preference number: 6 (lower is better)
Translates to: QVGKEMVPSQGT*SLIRLPGRRLL
Trigger: TAGGAGGCGCCTTCCTGGCAGACGAATGAGGGAGCAAGTTCCCTGTGATGGGACCATCTCCTTACCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp TCACCTCTGGATCCAGAGCTGACTCTTGGTGGTGAATaGTGCCAAGGGCCTGTCGCCGTGTGTGGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: SPLDPELTLGGE*CQGPVAVCGCD
Trigger: ATCACACCCACACACGGCGACAGGCCCTTGGCACCATTCACCACCAAGAGTCAGCTCTGGATCCAGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CATAACTGCCTGGCTATGTCTGCCTCTGCCCTGGGTTaGGAGCTGCTTGAAGCAGGCACCAGCTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: HNCLAMSASALG*ELLEAGTSSAS
Trigger: TGAAGCAGAGCTGGTGCCTGCTTCAAGCAGCTCTCAACCCAGGGCAGAGGCAGACATAGCCAGGCAGTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp TGCATCATAACTGCCTGGCTATGTCTGCCTCTGCCCTaGGTTGAGAGCTGCTTGAAGCAGGCACCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: CIITAWLCLPLP*VESCLKQAPAL
Trigger: CAGAGCTGGTGCCTGCTTCAAGCAGCTCTCAACCCAGGGCAGAGGCAGACATAGCCAGGCAGTTATGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp GGAAGGCGCCTCCTACAGGTGTCCCAGGCTGGACACTaGACTCACGTATTCCTGAGCAAAGTCAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: GRRLLQVSQAGH*THVFLSKVNEV
Trigger: AACCTCATTGACTTTGCTCAGGAATACGTGAGTCCAGTGTCCAGCCTGGGACACCTGTAGGAGGCGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp TTTGTGGTTAGGGGTGAGTGGGCGAGATGGTGCAGGTaGGAGGCAGATAGGGTTTCAGGAACTCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: FVVRGEWARWCR*EADRVSGTLLW
Trigger: CCAGAGAAGAGTTCCTGAAACCCTATCTGCCTCCCACCTGCACCATCTCGCCCACTCACCCCTAACCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp CTCCGCAGCAAGACCAGTATTCCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGTCGTCCCGGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: LRSKTSIPEQSQ*GSGGQCRPGRP
Trigger: AGGCCTACCGGGACGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACTGGTCTTGCTGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310032.12
ENST00000503045.5
ENST00000504168.5
ENST00000507471.1
ENST00000508164.6
ENST00000515708.5
CDS TCA 72 bp TGGACACTGGACTCACGTATTCCTGAGCAAAGTCAATaGGGTTCTGGAGGTCAATGTCGTCCCGGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: WTLDSRIPEQSQ*GSGGQCRPGRP
Trigger: AGGCCTACCGGGACGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACGTGAGTCCAGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp AGGTGTCCCAGGCTGGACACTGGACTCACGTATTCCTaGGCAAAGTCAATGAGGTTCTGGAGGTCAATGTCG +
Preference number: 6 (lower is better)
Translates to: RCPRLDTGLTYS*AKSMRFWRSMS
Trigger: CGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACGTGAGTCCAGTGTCCAGCCTGGGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS TCA 72 bp AAAAAGGGAGGGAGTGGGACAAGGATACTGGTTCAATaGCTGTGGCTTCCTCCAGACTACCTGAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KKGGSGTRILVQ*LWLPPDYLRGR
Trigger: CCTGCCTCTCAGGTAGTCTGGAGGAAGCCACAGTCATTGAACCAGTATCCTTGTCCCACTCCCTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CCA 72 bp GTGGACAGGACCTCGGAAATGGTGGGCGTAAGCCAGTaGTTTTCAAAGTCATCATTCCATTTGCTCGAGGTT +
Preference number: 6 (lower is better)
Translates to: VDRTSEMVGVSQ*FSKSSFHLLEV
Trigger: AACCTCGAGCAAATGGAATGATGACTTTGAAAACCACTGGCTTACGCCCACCATTTCCGAGGTCCTGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515708.5
CDS CAA 90 bp TTCAAGCTCTCCACGCAGAGGCCTTCCCATTCTCCACCCTTCATTTaGACTCTTACCACAATGTACAATTTTGCATACACACGTATGTAC +
Preference number: 6 (lower is better)
Translates to: FKLSTQRPSHSPPFI*TLTTMYNFAYTRMY
Trigger: GTACATACGTGTGTATGCAAAATTGTACATTGTGGTAAGAGTCAAAATGAAGGGTGGAGAATGGGAAGGCCTCTGCGTGGAGAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5
CDS CAA 72 bp TCCACGCAGAGGCCTTCCCATTCTCCACCCTTCATTTaGACTCTTACCACAATGTACAATTTTGCATACACA +
Preference number: 6 (lower is better)
Translates to: STQRPSHSPPFI*TLTTMYNFAYT
Trigger: TGTGTATGCAAAATTGTACATTGTGGTAAGAGTCAAAATGAAGGGTGGAGAATGGGAAGGCCTCTGCGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514705.5