RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN14 (Homo sapiens)

Ensembl gene IDs: ENSG00000108219

Ensembl transcript IDs: ENST00000265450.5, ENST00000341863.10, ENST00000372156.5, ENST00000372157.6, ENST00000372158.6, ENST00000372164.7, ENST00000429989.7, ENST00000469149.1, ENST00000481124.5, ENST00000616406.1

Found 1641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCCCTGTCCACGCCTGTGGGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: GATSASRYGQAPMLL*LMERDALSTPVGPS
Trigger: AGAGGGACCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp ACACCCTCCCTCATAGGAGGTGCGGAGGAGCACCCAGTCCCGGTCTaGGGCCTCAGGCAAGTCCCAGCACACCCCAGGGCCTCTGTTCTC +
Preference number: 1 (lower is better)
Translates to: TPSLIGGAEEHPVPV*GLRQVPAHPRASVL
Trigger: GAGAACAGAGGCCCTGGGGTGTGCTGGGACTTGCCTGAGGCCTCAGACCGGGACTGGGTGCTCCTCCGCACCTCCTATGAGGGAGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCAC +
Preference number: 1 (lower is better)
Translates to: PLRAGPHAALLDGER*PVHACGSLYPRPTH
Trigger: GTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp ATGGCAGGCCAGCCAGCCCTGGGTACATGGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: MAGQPALGTWPQEEP*PTVSGWPSWAGAPW
Trigger: CCAGGGAGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp TGCCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: CQWRGDQGVLQTCLS*RGSESSPPGSHRSP
Trigger: AGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp TCCTGCAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGG +
Preference number: 1 (lower is better)
Translates to: SCKQPLICACPSRLR*HSEAQRGHVRLPLR
Trigger: CCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp CTGGGTACATGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCTCCCTGGGCTTGCAGTGGGGAGGGT +
Preference number: 1 (lower is better)
Translates to: LGTWPQEEPWPTVSG*PSWAGAPWACSGEG
Trigger: ACCCTCCCCACTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCATGTACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp CTGGATGCCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGA +
Preference number: 1 (lower is better)
Translates to: LDASGEGTRVSCRHA*AAGGLSQALLAATG
Trigger: TCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCATCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp CCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTaGCTGACTCACTGCAGACGAGTCCATCCACACCACAGGCCCTGC +
Preference number: 1 (lower is better)
Translates to: PWYPLETTQPASSAC*LTHCRRVHPHHRPC
Trigger: GCAGGGCCTGTGGTGTGGATGGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp GTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTaGTGCCTGACTCACTGCAGACGAGTCCATCCACACCACAGGCCC +
Preference number: 1 (lower is better)
Translates to: VPWYPLETTQPASSA*CLTHCRRVHPHHRP
Trigger: GGGCCTGTGGTGTGGATGGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp AAGGCCCTCCCAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTaGCAGCTCTGCCTGCTGCCTGACTCACTGCAGACGAGTCCATCC +
Preference number: 1 (lower is better)
Translates to: KALPGPLVPTRDHTA*QLCLLPDSLQTSPS
Trigger: GGATGGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTGGGAGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CGGGGCTGCCGGCACTCGTGTTCCCCTGCAGAGGAAAGGTCTGCGTaGCCTAAGAGAGAGCTGCTGGCGTGCAGAGAGAAGCAGAGATGC +
Preference number: 1 (lower is better)
Translates to: RGCRHSCSPAEERSA*PKRELLACREKQRC
Trigger: GCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTCCTCTGCAGGGGAACACGAGTGCCGGCAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp AGCAGAGCCCAGGCTTGCAGCCAACCGGACCTGTGTCACCCAACTTaGCAGCCCAGAGACCTCCCAGGGAAGTCCTTCTCCCTCCCACGA +
Preference number: 1 (lower is better)
Translates to: SRAQACSQPDLCHPT*QPRDLPGKSFSLPR
Trigger: TCGTGGGAGGGAGAAGGACTTCCCTGGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp GAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCT +
Preference number: 1 (lower is better)
Translates to: ERLSPGRGKWQASQP*VHGHKRSPGQQFQA
Trigger: AGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp AGGGGACCAGGGTGTCCTGCAGACATGCTTGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: RGPGCPADMLELQGV*VKPSWQPQEPSLSF
Trigger: GAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp ATGTCTGGATGCCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCAC +
Preference number: 1 (lower is better)
Translates to: MSGCQWRGDQGVLQT*LSCRGSESSPPGSH
Trigger: GTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp GCGTGCCCTAAGAGAGAGCTGCTGGCGTGCAGAGAGAAGCAGAGATaGCGACGACGGGGAGGAAACACACTGGCGGTGGTGAGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: ACPKRELLACREKQR*RRRGGNTLAVVRLL
Trigger: AAGGAGCCTCACCACCGCCAGTGTGTTTCCTCCCCGTCGTCGGCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp TGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTaGATGACCCAAAGCAGATGTCTGGATGCCAGTGGAGAGGGGACC +
Preference number: 1 (lower is better)
Translates to: CPRLWVPLPTAHPQM*MTQSRCLDASGEGT
Trigger: GGTCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp AGGAGCCCACCATCTCCAGGCCGCCCTGTGGAGCAGAAAGAAGGCTaGCCAGAGGCTGTGAACCAGGCAAATCCACCCACCACAGACTGG +
Preference number: 1 (lower is better)
Translates to: RSPPSPGRPVEQKEG*PEAVNQANPPTTDW
Trigger: CCAGTCTGTGGTGGGTGGATTTGCCTGGTTCACAGCCTCTGGTCAGCCTTCTTTCTGCTCCACAGGGCGGCCTGGAGATGGTGGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CAGAAAGGCCGGCACACCCAGGACACACAGCTCATGCAGCAGCAGTaGCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAGTGTCCCC +
Preference number: 1 (lower is better)
Translates to: QKGRHTQDTQLMQQQ*PGFNPMSPLRLSVP
Trigger: GGGGACACTGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGTCCTGGGTGTGCCGGCCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp TGCTGCCTGACTCACTGCAGACGAGTCCATCCACACCACAGGCCCTaGCCACTGGGCTTGAGACTACTCGGACCCAGAGCAAGGAGAAGC +
Preference number: 1 (lower is better)
Translates to: CCLTHCRRVHPHHRP*PLGLRLLGPRARRS
Trigger: GCTTCTCCTTGCTCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGGGCCTGTGGTGTGGATGGACTCGTCTGCAGTGAGTCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CGTGTTCCCCTGCAGAGGAAAGGTCTGCGTGCCCTAAGAGAGAGCTaGTGGCGTGCAGAGAGAAGCAGAGATGCCGACGACGGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: RVPLQRKGLRALRES*WRAERSRDADDGEE
Trigger: TTCCTCCCCGTCGTCGGCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTCCTCTGCAGGGGAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CACGGCCCACCCACAGATGTGGATGACCCAAAGCAGATGTCTGGATaGCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATGCTTGAGC +
Preference number: 1 (lower is better)
Translates to: HGPPTDVDDPKQMSG*QWRGDQGVLQTCLS
Trigger: GCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGGTCATCCACATCTGTGGGTGGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp CACCAAGACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATGGAGGGAGGCTGCAGTATGTGGAGG +
Preference number: 1 (lower is better)
Translates to: HQDQKTVRPRWGVGE*LYVGCMEGGCSMWR
Trigger: CCTCCACATACTGCAGCCTCCCTCCATGCATCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp AACCCCCTTCACAGAAAGGCCGGCACACCCAGGACACACAGCTCATaGAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGAC +
Preference number: 1 (lower is better)
Translates to: NPLHRKAGTPRTHSS*SSSAQASIPCPHFD
Trigger: GTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGTCCTGGGTGTGCCGGCCTTTCTGTGAAGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp TGCTCTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATaGATGCCTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCA +
Preference number: 1 (lower is better)
Translates to: CSAGSLPTLQPPTVT*MPATSPVASAWNLP
Trigger: TGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp GATGAGACTGACACCCTCTCTGCTCTGCTGGGAGCCTTCCAACACTaGAGCCACCTACAGTCACATGCATGCCTGCCACCTCCCCAGTGG +
Preference number: 1 (lower is better)
Translates to: DETDTLSALLGAFQH*SHLQSHACLPPPQW
Trigger: CCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGTCAGTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp GCTGAGGAAATGGTACCCAGTTCCTGGCCGTCATGGGCACTGAGCTaGCTTCCTGCTGTGCCTCGTCAGTGCCTGCCTACATCGTTGCTC +
Preference number: 1 (lower is better)
Translates to: AEEMVPSSWPSWALS*LPAVPRQCLPTSLL
Trigger: GAGCAACGATGTAGGCAGGCACTGACGAGGCACAGCAGGAAGGCAGCTCAGTGCCCATGACGGCCAGGAACTGGGTACCATTTCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp ACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAGTGGGGAGGGTCAGGATTCAAATTC +
Preference number: 1 (lower is better)
Translates to: TRGALANSFRLAILG*GSLGLQWGGSGFKF
Trigger: GAATTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp GTTCCCCTGCAGAGGAAAGGTCTGCGTGCCCTAAGAGAGAGCTGCTaGCGTGCAGAGAGAAGCAGAGATGCCGACGACGGGGAGGAAACA +
Preference number: 1 (lower is better)
Translates to: VPLQRKGLRALRESC*RAERSRDADDGEET
Trigger: TGTTTCCTCCCCGTCGTCGGCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTCCTCTGCAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp GCCTCAGGCAAGTCCCAGCACACCCCAGGGCCTCTGTTCTCCTTATaGGTGGGACCAGATGGGGTCCACCAACCGTCCAAACGTGATATG +
Preference number: 1 (lower is better)
Translates to: ASGKSQHTPGPLFSL*VGPDGVHQPSKRDM
Trigger: CATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACTCATAAGGAGAACAGAGGCCCTGGGGTGTGCTGGGACTTGCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CAGGCAAGTCCCAGCACACCCCAGGGCCTCTGTTCTCCTTATGAGTaGGACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGC +
Preference number: 1 (lower is better)
Translates to: QASPSTPQGLCSPYE*DQMGSTNRPNVICC
Trigger: GCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACTCATAAGGAGAACAGAGGCCCTGGGGTGTGCTGGGACTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp CTGTGCCTCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCTTTCTTTCCATTCCTCATCCAACTA +
Preference number: 1 (lower is better)
Translates to: LCLCADSRCWAETAT*PALILAFFPFLIQL
Trigger: TAGTTGGATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGAGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp TGCAGCTGCTGCTGGTCTGGGGTGATGTTGTGGCTGCTGGCCTTGTaGACCACTGCCCAAGTGCGTAGCTGCAGTGTGGGAGTTACTATC +
Preference number: 1 (lower is better)
Translates to: CSCCWSGVMLWLLAL*TTAQVRSCSVGVTI
Trigger: GATAGTAACTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCCACAACATCACCCCAGACCAGCAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp TTGCCTAGGATCTGCGGAGATGGACAGGACAGGAGACTAAGGAGGTaGGAACCCTGGCCCACACCATCACTAAGGGCCCTTCCTGAGGTC +
Preference number: 1 (lower is better)
Translates to: LPRICGDGQDRRLRR*EPWPTPSLRALPEV
Trigger: GACCTCAGGAAGGGCCCTTAGTGATGGTGTGGGCCAGGGTTCTCACCTCCTTAGTCTCCTGTCCTGTCCATCTCCGCAGATCCTAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCTaGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCC +
Preference number: 1 (lower is better)
Translates to: HQVGSLMRLTPSLLC*EPSNTAATYSHMHA
Trigger: GGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp CATTTGGGCGGAGACCTTCCCATGACAGCAGGATGCCTCAGGTGCTaGGACCACTGCTGCCTCCCTCCTTTCTCAGCAGTCGTCTATGTT +
Preference number: 1 (lower is better)
Translates to: HLGGDLPMTAGCLRC*DHCCLPPFSAVVYV
Trigger: AACATAGACGACTGCTGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGCCCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp GCCACTCTGCTGCTTCTGGGGGCTCCCGGGCAACTTTGGTTGTGTTaGTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAGCAACACCCTA +
Preference number: 1 (lower is better)
Translates to: ATLLLLGAPGQLWLC*FLVASALQARSNTL
Trigger: TAGGGTGTTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp ACTCTTTTTAACTCAAAGGGCGGGAGGGAACTCCAGGACCCCAGATaGCAAACTGGCTCACACCGTGGACAACCTCCCACAAGGCCCTCC +
Preference number: 1 (lower is better)
Translates to: TLFNSKGGRELQDPR*QTGSHRGQPPTRPS
Trigger: GGAGGGCCTTGTGGGAGGTTGTCCACGGTGTGAGCCAGTTTGCCATCTGGGGTCCTGGAGTTCCCTCCCGCCCTTTGAGTTAAAAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CCCACCAACAGTCATGGAGTGAGGTTGGAAGGGATCCTCCAGCCCTaGCCAACAGTTTCACTGCAGCCTCATGAGAGACCCAGAGCCACA +
Preference number: 1 (lower is better)
Translates to: PTNSHGVRLEGILQP*PTVSLQPHERPRAT
Trigger: TGTGGCTCTGGGTCTCTCATGAGGCTGCAGTGAAACTGTTGGCCAGGGCTGGAGGATCCCTTCCAACCTCACTCCATGACTGTTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp AGGATGCTGCATTTCACAGCCGCATGGTTTCAGTGGGATAAAGCATaGGGAGGGGTGTGTCCGGGGATCCCTTCCCTTGCTGGCTTCACC +
Preference number: 1 (lower is better)
Translates to: RMLHFTAAWFQWDKA*GGVCPGIPSLAGFT
Trigger: GGTGAAGCCAGCAAGGGAAGGGATCCCCGGACACACCCCTCCTCATGCTTTATCCCACTGAAACCATGCGGCTGTGAAATGCAGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp AGCTACAGGAGGCTGGACCCACAACAGGAAAGGAACCTGGGTCCATaGAAGACTGTGTGGAGCAGAGAATCCCCCACCCTAGTTCCCAGC +
Preference number: 1 (lower is better)
Translates to: SYRRLDPQQERNLGP*KTVWSRESPTLVPS
Trigger: GCTGGGAACTAGGGTGGGGGATTCTCTGCTCCACACAGTCTTTCATGGACCCAGGTTCCTTTCCTGTTGTGGGTCCAGCCTCCTGTAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp GGAAGGGATCCTCCAGCCCTGGCCAACAGTTTCACTGCAGCCTCATaGGAGACCCAGAGCCACAGTCACCCAGCTAAGCTGCTTCTAGAT +
Preference number: 1 (lower is better)
Translates to: GRDPPALANSFTAAS*ETQSHSHPAKLLLD
Trigger: ATCTAGAAGCAGCTTAGCTGGGTGACTGTGGCTCTGGGTCTCTCATGAGGCTGCAGTGAAACTGTTGGCCAGGGCTGGAGGATCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp GCCACCTACAGTCACATGCATGCCTGCCACCTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTG +
Preference number: 1 (lower is better)
Translates to: ATYSHMHACHLPSGL*MESPREIPRSRKVV
Trigger: CACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp TGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTaGCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATT +
Preference number: 1 (lower is better)
Translates to: WEPSNTAATYSHMHA*HLPSGLCMESPREI
Trigger: AATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp AGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTaGTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCAT +
Preference number: 1 (lower is better)
Translates to: SHQVGSLMRLTPSLL*WEPSNTAATYSHMH
Trigger: ATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp GACAGGAAGGGTGTAGCCTGGGCTTGCATACCTCCAAGGACAGGGTaGTCAGTCCCTCCTAGAGGCCACTTCACTTCTTCCCATATTGGC +
Preference number: 1 (lower is better)
Translates to: DRKGVAWACIPPRTG*SVPPRGHFTSSHIG
Trigger: GCCAATATGGGAAGAAGTGAAGTGGCCTCTAGGAGGGACTGAGCACCCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACCCTTCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp AGAATAGCTGGTGGACACAGGGGGACAGTGGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACAT +
Preference number: 1 (lower is better)
Translates to: RIAGGHRGTVDKALP*HQSTHWLRLTSLEH
Trigger: ATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGTCCACCAGCTATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp AGGGAGGCTGCAGTATGTGGAGGAGAAAGAGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCC +
Preference number: 1 (lower is better)
Translates to: REAAVCGGEREAVVG*FLRHSRGLKGSAPA
Trigger: GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp CACTGCAGCCACCTACAGTCACATGCATGCCTGCCACCTCCCCAGTaGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: HCSHLQSHACLPPPQ*PLHGISQRNSTFQE
Trigger: TTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp GGCTTACTTCACTTGAACATGGCTGAGGATCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: GLLHLNMAEDPANNP*YVHVPADCAGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp ACCACTGCTGCCTCCCTCCTTTCTCAGCAGTCGTCTATGTTCCTCTaGGACTGCTGGCTGAGAAGCCATCAGGTGGGTTCCCTGATGAGA +
Preference number: 1 (lower is better)
Translates to: TTAASLLSQQSSMFL*DCWLRSHQVGSLMR
Trigger: TCTCATCAGGGAACCCACCTGATGGCTTCTCAGCCAGCAGTCTCAGAGGAACATAGACGACTGCTGAGAAAGGAGGGAGGCAGCAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp GCCCAAGTGCGTAGCTGCAGTGTGGGAGTTACTATCCCATTTTGCTaGGGAAATGGTACCCAGTTCCTGGCCGTCATGGGCACTGAGCTG +
Preference number: 1 (lower is better)
Translates to: AQVRSCSVGVTIPFC*GNGTQFLAVMGTEL
Trigger: CAGCTCAGTGCCCATGACGGCCAGGAACTGGGTACCATTTCCTCAGCAAAATGGGATAGTAACTCCCACACTGCAGCTACGCACTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACAAGGGCAACTGAAAGTGCTGCCATA +
Preference number: 1 (lower is better)
Translates to: LQLSLIAGDKPQANL*GCGRHTRATESAAI
Trigger: TATGGCAGCACTTTCAGTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp ATAGCTGACAGCATCCCCGGCCTTCATCCCCCTCCTGGAGGATGCTaGATTTCACAGCCGCATGGTTTCAGTGGGATAAAGCATGAGGAG +
Preference number: 1 (lower is better)
Translates to: IADSIPGLHPPPGGC*ISQPHGFSGIKHEE
Trigger: CTCCTCATGCTTTATCCCACTGAAACCATGCGGCTGTGAAATGCAGCATCCTCCAGGAGGGGGATGAAGGCCGGGGATGCTGTCAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp GCAATAGCTGACAGCATCCCCGGCCTTCATCCCCCTCCTGGAGGATaGTGCATTTCACAGCCGCATGGTTTCAGTGGGATAAAGCATGAG +
Preference number: 1 (lower is better)
Translates to: AIADSIPGLHPPPGG*CISQPHGFSGIKHE
Trigger: CTCATGCTTTATCCCACTGAAACCATGCGGCTGTGAAATGCAGCATCCTCCAGGAGGGGGATGAAGGCCGGGGATGCTGTCAGCTATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp TGGGGCTCCCTGGGCTTGCAGTGGGGAGGGTCAGGATTCAAATTCTaGGTGACAATTTCAGTAGCACCAAGACCAGAAGACAGTGAGGCC +
Preference number: 1 (lower is better)
Translates to: WGSLGLQWGGSGFKF*VTISVAPRPEDSEA
Trigger: GGCCTCACTGTCTTCTGGTCTTGGTGCTACTGAAATTGTCACCCAGAATTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp CCTACAGTCACATGCATGCCTGCCACCTCCCCAGTGGCCTCTGCATaGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATC +
Preference number: 1 (lower is better)
Translates to: PTVTCMPATSPVASA*NLPEKFHVPGRLCI
Trigger: GATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp CTCAGAGCCCAGGTGATACACACATTCCTGGATGTGGCCACAGGGTaGATGATAGTACCCTCAGCTGAGATGGGAATAGGGGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: LRAQVIHTFLDVATG*MIVPSAEMGIGGRA
Trigger: TGCTCTGCCCCCTATTCCCATCTCAGCTGAGGGTACTATCATCCACCCTGTGGCCACATCCAGGAATGTGTGTATCACCTGGGCTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp TGGGAGTTACTATCCCATTTTGCTGAGGAAATGGTACCCAGTTCCTaGCCGTCATGGGCACTGAGCTGCCTTCCTGCTGTGCCTCGTCAG +
Preference number: 1 (lower is better)
Translates to: WELLSHFAEEMVPSS*PSWALSCLPAVPRQ
Trigger: CTGACGAGGCACAGCAGGAAGGCAGCTCAGTGCCCATGACGGCCAGGAACTGGGTACCATTTCCTCAGCAAAATGGGATAGTAACTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp ACTCCCGTGGCACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTGCAAACAACCCCTGATATGTGCATG +
Preference number: 1 (lower is better)
Translates to: TPVAPVHALAQAYFT*TWLRILQTTPDMCM
Trigger: CATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTGCCACGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 90 bp ATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGC +
Preference number: 1 (lower is better)
Translates to: ILCLWVDSRGMQSQV*AGNKGDPWSSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR CCA 90 bp AAGAAGGCCAGAGTTGACAATTGGGATAAGCAGCTTTCAGCTACGTaGGGCATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAG +
Preference number: 1 (lower is better)
Translates to: KKARVDNWDKQLSAT*GMVGGAKEGVQTAQ
Trigger: CTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp CAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCTACGTGGGGCATGGTGGGTGGTGCA +
Preference number: 1 (lower is better)
Translates to: QCLVLQRLKKARVDN*DKQLSATWGMVGGA
Trigger: TGCACCACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp GGCTGCTGGCCTTGTGAACCACTGCCCAAGTGCGTAGCTGCAGTGTaGGAGTTACTATCCCATTTTGCTGAGGAAATGGTACCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: GCWPCEPLPKCVAAV*ELLSHFAEEMVPSS
Trigger: GGAACTGGGTACCATTTCCTCAGCAAAATGGGATAGTAACTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CCAGGAAATCCAGTGCCAAGGTTCACTTCCCTAAACCATGGGGCCTaGGGCACAGACCACTGCTGTCTTCCAATATCTGGCCTCTCTTCT +
Preference number: 1 (lower is better)
Translates to: PGNPVPRFTSLNHGA*GTDHCCLPISGLSS
Trigger: AGAAGAGAGGCCAGATATTGGAAGACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTGAACCTTGGCACTGGATTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp ACCCAAGAGCTACTGCTCAGCCTACCCCTCCCCAGTGACCAAATCTaGAGGGCACTGAAGGAATTCATGTGCCGTCTGTCCCTTAATCTG +
Preference number: 1 (lower is better)
Translates to: TQELLLSLPLPSDQI*RALKEFMCRLSLNL
Trigger: CAGATTAAGGGACAGACGGCACATGAATTCCTTCAGTGCCCTCCAGATTTGGTCACTGGGGAGGGGTAGGCTGAGCAGTAGCTCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp AGGCAAACCAGACCTTCCTATGCCAGGAAGGCTAGGAAGTGGCAATaGAGAAACCATCCATGTTCCCTGGGGTTCCTAAGCTGGAAGCGG +
Preference number: 1 (lower is better)
Translates to: RQTRPSYARKARKWQ*RNHPCSLGFLSWKR
Trigger: CCGCTTCCAGCTTAGGAACCCCAGGGAACATGGATGGTTTCTCCATTGCCACTTCCTAGCCTTCCTGGCATAGGAAGGTCTGGTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp ACCTGCAGGCAAACCAGACCTTCCTATGCCAGGAAGGCTAGGAAGTaGCAATGGAGAAACCATCCATGTTCCCTGGGGTTCCTAAGCTGG +
Preference number: 1 (lower is better)
Translates to: TCRQTRPSYARKARK*QWRNHPCSLGFLSW
Trigger: CCAGCTTAGGAACCCCAGGGAACATGGATGGTTTCTCCATTGCCACTTCCTAGCCTTCCTGGCATAGGAAGGTCTGGTTTGCCTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp CACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTaGGGATCCTGCAAACAACCCCTGATATGTGCATGTCCCAGCAGA +
Preference number: 1 (lower is better)
Translates to: HQSTHWLRLTSLEHG*GSCKQPLICACPSR
Trigger: TCTGCTGGGACATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp CAAATTCTGGGTGACAATTTCAGTAGCACCAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGATGCA +
Preference number: 1 (lower is better)
Translates to: QILGDNFSSTKTRRQ*GHAGEWGSACMWDA
Trigger: TGCATCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTTGGTGCTACTGAAATTGTCACCCAGAATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp CAGGAAAGACCCCAAGGCTTTAAAGTTAGCATGTGCATGGTGAGGTaGGAAGAGGGTGCAAATGCCACAGCTGGCCTCCAACCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: QERPQGFKVSMCMVR*EEGANATAGLQPGK
Trigger: CTTCCCTGGTTGGAGGCCAGCTGTGGCATTTGCACCCTCTTCTCACCTCACCATGCACATGCTAACTTTAAAGCCTTGGGGTCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp GGGTACAGGAAAGACCCCAAGGCTTTAAAGTTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAAATGCCACAGCTGGCCTCCAACCAG +
Preference number: 1 (lower is better)
Translates to: GYRKDPKALKLACAW*GEKRVQMPQLASNQ
Trigger: CTGGTTGGAGGCCAGCTGTGGCATTTGCACCCTCTTCTCACCTCACCATGCACATGCTAACTTTAAAGCCTTGGGGTCTTTCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp CAAGCATTTGAGGACACTCAGGCTCTCTGGGTAGCAGACATGGCCTaGGTGATTTCATTTACTACTGAGAGGACAGTGAGTGCCCCGGGC +
Preference number: 1 (lower is better)
Translates to: QAFEDTQALWVADMA*VISFTTERTVSAPG
Trigger: GCCCGGGGCACTCACTGTCCTCTCAGTAGTAAATGAAATCACTCAGGCCATGTCTGCTACCCAGAGAGCCTGAGTGTCCTCAAATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp CACCCCCATCAGCCTGGCAGCTTTGTGCCCACAGTAGATTTTCTATaGGGACCTCTCACTGATGCACTTGAGTGGCAGAGACTTGGGACT +
Preference number: 1 (lower is better)
Translates to: HPHQPGSFVPTVDFL*GPLTDALEWQRLGT
Trigger: AGTCCCAAGTCTCTGCCACTCAAGTGCATCAGTGAGAGGTCCTCATAGAAAATCTACTGTGGGCACAAAGCTGCCAGGCTGATGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp TTACACACTTTAAGAAAAGGAGAGCCGGCTCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGA +
Preference number: 1 (lower is better)
Translates to: LHTLRKGEPALSEEP*PPRHRRHQGLMLSR
Trigger: TCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCTCCTTTTCTTAAAGTGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 90 bp CCAAGGTTCACTTCCCTAAACCATGGGGCCTGGGGCACAGACCACTaGTGTCTTCCAATATCTGGCCTCTCTTCTTTCTCCTACACACAC +
Preference number: 1 (lower is better)
Translates to: PRFTSLNHGAWGTDH*CLPISGLSSFSYTH
Trigger: GTGTGTGTAGGAGAAAGAAGAGAGGCCAGATATTGGAAGACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTGAACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp TGTACACACACACACATTTATGATTACAACAGCAGAGCCCAGGCTTaGAGCCAACCGGACCTGTGTCACCCAACTTGCCAGCCCAGAGAC +
Preference number: 1 (lower is better)
Translates to: CTHTHIYDYNSRAQA*SQPDLCHPTCQPRD
Trigger: GTCTCTGGGCTGGCAAGTTGGGTGACACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCTGTTGTAATCATAAATGTGTGTGTGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp AAGTGGCAATGGAGAAACCATCCATGTTCCCTGGGGTTCCTAAGCTaGAAGCGGGCTTTGAGGCATCTCTTAGAAGCAGCTCTGGCACTG +
Preference number: 1 (lower is better)
Translates to: KWQWRNHPCSLGFLS*KRALRHLLEAALAL
Trigger: CAGTGCCAGAGCTGCTTCTAAGAGATGCCTCAAAGCCCGCTTCCAGCTTAGGAACCCCAGGGAACATGGATGGTTTCTCCATTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTTaGTTTCTTTCCATTCCTCATCCAACTATTCAGAGTCACATGATA +
Preference number: 1 (lower is better)
Translates to: QPMLGGDCHVTGSHP*FLSIPHPTIQSHMI
Trigger: TATCATGTGACTCTGAATAGTTGGATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 90 bp GAGTGGGACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTaGTGTCTTCAGGGCACATTATCCCCAGCGTTGATGTTCACAATA +
Preference number: 1 (lower is better)
Translates to: EWDQMGSTNRPNVIC*CLQGTLSPALMFTI
Trigger: TATTGTGAACATCAACGCTGGGGATAATGTGCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp TATGAGTGGGACCAGATGGGGTCCACCAACCGTCCAAACGTGATATaGTGCTGTCTTCAGGGCACATTATCCCCAGCGTTGATGTTCACA +
Preference number: 1 (lower is better)
Translates to: YEWDQMGSTNRPNVI*CCLQGTLSPALMFT
Trigger: TGTGAACATCAACGCTGGGGATAATGTGCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp TGCCTCGTCAGTGCCTGCCTACATCGTTGCTCATTGATCATGGCCTaGGAGTTAGTGTCATCAGAGGAAGGGAGAAGAGTTCCTAGAGTG +
Preference number: 1 (lower is better)
Translates to: CLVSACLHRCSLIMA*ELVSSEEGRRVPRV
Trigger: CACTCTAGGAACTCTTCTCCCTTCCTCTGATGACACTAACTCGCAGGCCATGATCAATGAGCAACGATGTAGGCAGGCACTGACGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CACACCTTTGCCAGTTATGAGAATTGTGTTGCAAAGAGGAAGGAGTaGAGAGTTTACCAGCCAAGGGCTGGAGGACCCCAACACTCCAGT +
Preference number: 1 (lower is better)
Translates to: HTFASYENCVAKRKE*RVYQPRAGGPQHSS
Trigger: ACTGGAGTGTTGGGGTCCTCCAGCCCTTGGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGCAAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp AATAAACTATTTACACACTTTAAGAAAAGGAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAAT +
Preference number: 1 (lower is better)
Translates to: NKLFTHFKKRRAGSQ*RTMPTAPPAPSGLN
Trigger: ATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCTCCTTTTCTTAAAGTGTGTAAATAGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 90 bp GGACCGTTTCGTTTCAGTGATTCAAAGCTTGAGCTATCTGACATGTaGCCCAGGCAGCTCTCTCGTAGGGACTGGCAGCCACAGATAAAA +
Preference number: 1 (lower is better)
Translates to: GPFRFSDSKLELSDM*PRQLSRRDWQPQIK
Trigger: TTTTATCTGTGGCTGCCAGTCCCTACGAGAGAGCTGCCTGGGTCACATGTCAGATAGCTCAAGCTTTGAATCACTGAAACGAAACGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp CAAGATCCTGTTGACGTCACTGAGCCACTTGGATCAACCCAAACCTaGAACTCACCCCACCTTGGGACTTTCCAGTTTCAAGAGCCAAAA +
Preference number: 1 (lower is better)
Translates to: QDPVDVTEPLGSTQT*NSPHLGTFQFQEPK
Trigger: TTTTGGCTCTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCCAAGTGGCTCAGTGACGTCAACAGGATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp GCCTGTGACTCAGGACTCGGAATGATAAACAAGAGAGAAATACACTaGGTTTCTATGATAGTCACTAACTCGGGGCTGCCGGCACTCGTG +
Preference number: 1 (lower is better)
Translates to: ACDSGLGMINKREIH*VSMIVTNSGLPALV
Trigger: CACGAGTGCCGGCAGCCCCGAGTTAGTGACTATCATAGAAACTCAGTGTATTTCTCTCTTGTTTATCATTCCGAGTCCTGAGTCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp GCCTTTACCATCCATCCTTCTGTAAGGTCTACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATA +
Preference number: 1 (lower is better)
Translates to: AFTIHPSVRSTYPIP*FLWQPRLPLRCLAI
Trigger: TATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTAGACCTTACAGAAGGATGGATGGTAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 90 bp TTGTGTTGCAAAGAGGAAGGAGTGGAGAGTTTACCAGCCAAGGGCTaGAGGACCCCAACACTCCAGTTTCTTAGAACATTCATTGCAGGT +
Preference number: 1 (lower is better)
Translates to: LCCKEEGVESLPAKG*RTPTLQFLRTFIAG
Trigger: ACCTGCAATGAATGTTCTAAGAAACTGGAGTGTTGGGGTCCTCCAGCCCTTGGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CTGGCACAGCCACCATGTAAGGATCAGCAACAGCAGGTGAGAGTCTaGAGTAGTTTCTGCCTTGTCTCCACTGAAAAATTATGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: LAQPPCKDQQQQVRV*SSFCLVSTEKLWVS
Trigger: TGACACCCATAATTTTTCAGTGGAGACAAGGCAGAAACTACTCCAGACTCTCACCTGCTGTTGCTGATCCTTACATGGTGGCTGTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp TGGTACAAAGGCAAGGCCCATCTGTTCTTGGCACACTCCTACAACTaGTGGCGTGACCGTGAAAACGCACTGTGGATCAGTATATTAAGT +
Preference number: 1 (lower is better)
Translates to: WYKGKAHLFLAHSYN*WRDRENALWISILS
Trigger: ACTTAATATACTGATCCACAGTGCGTTTTCACGGTCACGCCATCAGTTGTAGGAGTGTGCCAAGAACAGATGGGCCTTGCCTTTGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp TATCTAAAACTAGAAGAAAACACTATGGTCCTTCCTGCTGACAGCTaGGTGCTTGGGCCTAAATCAGCATCTACACACGCGGCCTGCAAC +
Preference number: 1 (lower is better)
Translates to: YLKLEENTMVLPADS*VLGPKSASTHAACN
Trigger: GTTGCAGGCCGCGTGTGTAGATGCTGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAGGACCATAGTGTTTTCTTCTAGTTTTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CTTCTTTCTCCTACACACACAGCTAGACCTTTGCATCATTTCAGGTaGCTTGTGAGTTCTGGCCAGCAGAATGTGAGAACAAGCAGAGTA +
Preference number: 1 (lower is better)
Translates to: LLSPTHTARPLHHFR*LVSSGQQNVRTSRV
Trigger: TACTCTGCTTGTTCTCACATTCTGCTGGCCAGAACTCACAAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGTGTGTAGGAGAAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp ATCTCCTTGTCAGATGAGACTTTTAGAACAGACCCGACATTCTGTTaGCTTAGAAGAGCTGATGTCATCCTCAGAGCCCAGGTGATACAC +
Preference number: 1 (lower is better)
Translates to: ISLSDETFRTDPTFC*LRRADVILRAQVIH
Trigger: GTGTATCACCTGGGCTCTGAGGATGACATCAGCTCTTCTAAGTCAACAGAATGTCGGGTCTGTTCTAAAAGTCTCATCTGACAAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp TCTGAATTGGGTTTTCTATTACCTGCAACTGTAAATGGACTCCTCTaGTACAAAGGCAAGGCCCATCTGTTCTTGGCACACTCCTACAAC +
Preference number: 1 (lower is better)
Translates to: SELGFLLPATVNGLL*YKGKAHLFLAHSYN
Trigger: GTTGTAGGAGTGTGCCAAGAACAGATGGGCCTTGCCTTTGTACCAGAGGAGTCCATTTACAGTTGCAGGTAATAGAAAACCCAATTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 90 bp CTTACCTGTGATCCTGCCAGCACAGCCTTCAGTAGTCATGTCCTCTaGGGGTTCTGTGCATATATAAGAATAATTACTGCAACATCCATC +
Preference number: 1 (lower is better)
Translates to: LTCDPASTAFSSHVL*GFCAYIRIITATSI
Trigger: GATGGATGTTGCAGTAATTATTCTTATATATGCACAGAACCCCCAGAGGACATGACTACTGAAGGCTGTGCTGGCAGGATCACAGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp CAGAGTCACATGATATGGCTGAGAACAGCCAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTGCAAAAATCGCACCGAGACTTCATC +
Preference number: 1 (lower is better)
Translates to: QSHMIWLRTARRVYS*KINPTLQKSHRDFI
Trigger: GATGAAGTCTCGGTGCGATTTTTGCAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCTGGCTGTTCTCAGCCATATCATGTGACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 90 bp CTCAGACTACAGTCACAAATTTTACATGCACACCTTTGCCAGTTATaGGAATTGTGTTGCAAAGAGGAAGGAGTGGAGAGTTTACCAGCC +
Preference number: 1 (lower is better)
Translates to: LRLQSQILHAHLCQL*ELCCKEEGVESLPA
Trigger: GGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGCAAAGGTGTGCATGTAAAATTTGTGACTGTAGTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 90 bp CCATGTAAGGATCAGCAACAGCAGGTGAGAGTCTGGAGTAGTTTCTaGCTTGTCTCCACTGAAAAATTATGGGTGTCAAAATCAATAGCA +
Preference number: 1 (lower is better)
Translates to: PCKDQQQQVRVWSSF*LVSTEKLWVSKSIA
Trigger: TGCTATTGATTTTGACACCCATAATTTTTCAGTGGAGACAAGGCAGAAACTACTCCAGACTCTCACCTGCTGTTGCTGATCCTTACATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 90 bp GGGCACCTGGTGGATGCTCTAACCCTCAGGATTCACTTTTCACCATaGGATATTGACTCCTTTAAATTTCTGCCTGTGTCCTATTTTAAA +
Preference number: 1 (lower is better)
Translates to: GHLVDALTLRIHFSP*DIDSFKFLPVSYFK
Trigger: TTTAAAATAGGACACAGGCAGAAATTTAAAGGAGTCAATATCTCATGGTGAAAAGTGAATCCTGAGGGTTAGAGCATCCACCAGGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 90 bp CGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGCCCTGTCCACGCCTGTGGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: RGHVRLPLRAGPHAA*LDGERCPVHACGSL
Trigger: GAGGGACCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: AEERLSPGRGKWQASQPWMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: AEERLSPGRGKWQASQPWLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 90 bp GCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTGTCCACGCCTGTGGGTCCCTCTACC +
Preference number: 2 (lower is better)
Translates to: ATSASRYGQAPMLLC*MERDALSTPVGPST
Trigger: GGTAGAGGGACCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 2 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLAETAT*PALILA
Trigger: AGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGC...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTCATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: TQGDSGQGTPVAPVHALAHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCAGCCCTGGGTACATaGCCACAAGAGGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLPALGT*PQEEPW
Trigger: CCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGG...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp TCTGGATGCCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATGCTaGAGCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: SGCQWRGDQGVLQTC*SCRGSESSPPGSHR
Trigger: CCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCATCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLTHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGAATGCCTGGAGCTTCTaGGCAGCTGCAGCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLNAWSF*AAAAWG
Trigger: ACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCATT...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGTGATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCVISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCAC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCCACACCACAGGCCCTaGCCACTGGGCTTGAGACTA +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCPHHRP*PLGLRL
Trigger: TAGTCTCAAGCCCAGTGGGCAGGGCCTGTGGTGTGG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: AEERLSPGRGKWQASQPWPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 2 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 2 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCACCAGTCCACGCACTaGCTCAGGCTTACTTCACTT +
Preference number: 2 (lower is better)
Translates to: AEERLSPGRGKWQASQPWHQSTH*LRLTSL
Trigger: AAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACACAGCCCTGCCCTGTaGGTAGTGGGATTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPHSPAL*VVGFPG
Trigger: TCCGGGGAATCCCACTACCCACAGGGCAGGGCTGTG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGACCTGCCTCGGTCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: PLETTQPASSACCLTHCRPASVS*VAGITG
Trigger: GCCTGTAATCCCAGCTACCCAGGAGACCGAGGCAGG...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTGGTGCTACAGAGGCTaGAGAAGGCCAGAGTTGACA +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCWCYRG*RRPELT
Trigger: TGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGLDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 2 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPLSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGTGCTAGGTGGGGAGTaGACAGGAGGCCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTVLGGE*TGGLPC
Trigger: ACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCAC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: QTTPDMCMSQQTALALRGGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCCAACTTGTGCGGCTGTaGCCGGCACACAAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSQLVRL*PAHKGN
Trigger: GTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTG...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACAGCCTCCGGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 2 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNSLRSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp CAAGACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAGGGAGGCTGCAGTATGTGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: QDQKTVRPRWGVGEC*YVGCMEGGCSMWRR
Trigger: TCTCCTCCACATACTGCAGCCTCCCTCCATGCATCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 90 bp GGCCACTCTGCTGCTTCTGGGGGCTCCCGGGCAACTTTGGTTGTGTaGGTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAGCAACACCCT +
Preference number: 2 (lower is better)
Translates to: GHSAASGGSRATLVV*VSGSICAPGKKQHP
Trigger: AGGGTGTTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCG +
Preference number: 2 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAARAGSQ*RTMPTA
Trigger: CGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCACTCCAAATGCCTGCTaGGGCTTGCCACAGACCTCG +
Preference number: 2 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTTPNAC*GLPQTS
Trigger: CGAGGTCTGTGGCAAGCCTCAGCAGGCATTTGGAGT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACA +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFPQANL*GCGRHT
Trigger: TGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAACCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACA +
Preference number: 2 (lower is better)
Translates to: VLWTDTRKTLELERPTCEPQANL*GCGRHT
Trigger: TGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGG...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGPTVSG*PSWAGA
Trigger: AGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCAACTTGTGCGGCTGTaGCCGGCACACAAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGQLVRL*PAHKGN
Trigger: GTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAATGAGTGGGACCAGATaGGGTCCACCAACCGTCCAA +
Preference number: 2 (lower is better)
Translates to: PLETTQPASSACCLTHCRMSGTR*GPPTVQ
Trigger: TTGGACGGTTGGTGGACCCCATCTGGTCCCACTCAT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATTCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDSCRHA*AAGGLS
Trigger: ACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGA...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGTTGCAGTCCATCCCTaGACGATGAGAAGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: PLETTQPASSACCLTHCRVAVHP*TMRSGL
Trigger: CAGACCACTTCTCATCGTTCAGGGATGGACTGCAAC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGATCCTCAGAGCCCAGGTaGTACACACATTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: PLETTQPASSACCLTHCRSSEPR*YTHSWM
Trigger: CATCCAGGAATGTGTGTATCACCTGGGCTCTGAGGA...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFLDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 2 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGTTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGTCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPLPSGL*MESPRE
Trigger: TTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGAACCACTGCCCAAGTaGGTAGCTGCAGTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNEPLPK*VAAVWE
Trigger: CTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 2 (lower is better)
Translates to: GGLSQALLAATGALSVFQHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: QTTPDMCMSQQTALALRGMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCCTTCCAGGAGCTCTaGCAGGGAGGGTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCAFQEL*QGGSVA
Trigger: GGCCACAGACCCTCCCTGCCAGAGCTCCTGGAAGGC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGTGCCAGGCTTCTTGTaGACCATGCAGATGGTTTTT +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCVPGFL*TMQMVF
Trigger: AAAAACCATCTGCATGGTCCACAAGAAGCCTGGCAC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGATGTTCTCCTTATGAGTaGGACCAGATGGGGTCCACC +
Preference number: 2 (lower is better)
Translates to: PLETTQPASSACCLTHCRCSPYE*DQMGST
Trigger: GGTGGACCCCATCTGGTCCCACTCATAAGGAGAACA...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp TTGATGGCCACTCTGCTGCTTCTGGGGGCTCCCGGGCAACTTTGGTaGTGTTGGTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: LMATLLLLGAPGQLW*CWFLVASALQARSN
Trigger: GTTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGTGGCCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp ACAGAAGGCACGGGAAGGACCACTACCTCTCAGAGATGGAAAGGCTaGCCATGGTCCACGCAGCACAAAGCCCACCCCCAGCCATATCAT +
Preference number: 2 (lower is better)
Translates to: TEGTGRTTTSQRWKG*PWSTQHKAHPQPYH
Trigger: ATGATATGGCTGGGGGTGGGCTTTGTGCTGCGTGGACCATGGCAAGCCTTTCCATCTCTGAGAGGTAGTGGTCCTTCCCGTGCCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 2 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGATGTGCATGGTGAGGTaGGAAGAGGGTGCAAATGCC +
Preference number: 2 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGMCMVR*EEGANA
Trigger: GGCATTTGCACCCTCTTCTCACCTCACCATGCACAT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCTTCCTGCTGACAGCTaGGTGCTTGGGCCTAAATCA +
Preference number: 2 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTLPADS*VLGPKS
Trigger: TGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 2 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCC +
Preference number: 2 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGAPMLL*LMERDA
Trigger: GGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGC...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCTGCTTGTATGTGGGATaGATGGAGGGAGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSCLYVG*MEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCA...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATG +
Preference number: 2 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCWGVGE*LYVGCM
Trigger: CATGCATCCCACATACAAGCACTCCCCCACTCCCCA...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGTGCTAGGTGGGGAGTaGACAGGAGGCCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCVLGGE*TGGLPC
Trigger: ACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCAC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: VLWTDTRKTLELERPTCEGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGT +
Preference number: 2 (lower is better)
Translates to: VLWTDTRKTLELERPTCETYPIP*FLWQPR
Trigger: ACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGT...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGAGAACTGGCGAGCCTaGGCCTCTGAAGCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGENWRA*ASEAEK
Trigger: CTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp TTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCACACAAGGGCAACTGAAAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: FLQLSLIAGDKPQAN*CGCGRHTRATESAA
Trigger: GGCAGCACTTTCAGTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp GTGTGCCCTAACCACCCCAGTGGCTTGAGTGTTTCTCCGCTTCTTTaGCCTAGGATCTGCGGAGATGGACAGGACAGGAGACTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: VCPNHPSGLSVSPLL*PRICGDGQDRRLRR
Trigger: CCTCCTTAGTCTCCTGTCCTGTCCATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGTTAGGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp AGAAACCATCCATGTTCCCTGGGGTTCCTAAGCTGGAAGCGGGCTTaGAGGCATCTCTTAGAAGCAGCTCTGGCACTGGTGTGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RNHPCSLGFLSWKRA*RHLLEAALALVWRG
Trigger: CCCTCTCCACACCAGTGCCAGAGCTGCTTCTAAGAGATGCCTCAAAGCCCGCTTCCAGCTTAGGAACCCCAGGGAACATGGATGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 2 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 2 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: EQPQKSPDRKGGPVITDITHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCCATGCTGCTTTGCTTaGTGGAGAGAGATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWPCCFA*WREMPC
Trigger: ACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAACCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VLWTDTRKTLELERPTCEPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGTAGCAGACATGGCCTaGGTGATTTCATTTACTACT +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCVADMA*VISFTT
Trigger: AGTAGTAAATGAAATCACTCAGGCCATGTCTGCTAC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGACAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGATGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATG +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGWGVGE*LYVGCM
Trigger: CATGCATCCCACATACAAGCACTCCCCCACTCCCCA...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGCTGGTGAGGACAGCTaGAGCAGAGTCCTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGAGEDS*SRVLSR
Trigger: TCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCTGTGGACCATGCAGATaGTTTTTCAGCCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTCGPCR*FFSPAH
Trigger: GTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACA...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTGGAAGGCAGAGAAATaGAAACAAGATCCTGTTGAC +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCWKAEK*KQDPVD
Trigger: GTCAACAGGATCTTGTTTCCATTTCTCTGCCTTCCA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp GCCTTCCTGCTGTGCCTCGTCAGTGCCTGCCTACATCGTTGCTCATaGATCATGGCCTGCGAGTTAGTGTCATCAGAGGAAGGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: AFLLCLVSACLHRCS*IMACELVSSEEGRR
Trigger: TCTTCTCCCTTCCTCTGATGACACTAACTCGCAGGCCATGATCAATGAGCAACGATGTAGGCAGGCACTGACGAGGCACAGCAGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 2 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR-3UTR TCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAATHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCTCACTTGAACATGGCTaGGGATCCTGCAAACAACCC +
Preference number: 2 (lower is better)
Translates to: EQPQKSPDRKGGPVITDISLEHG*GSCKQP
Trigger: GGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGA...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTG +
Preference number: 2 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIQAYFT*TWLRIL
Trigger: CAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTATGTGCATGGTGAGGTaGGAAGAGGGTGCAAATGCC +
Preference number: 2 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPMCMVR*EEGANA
Trigger: GGCATTTGCACCCTCTTCTCACCTCACCATGCACAT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCAACTCATTTAATCCTTaGAACAACCTCACAGGGGTA +
Preference number: 2 (lower is better)
Translates to: QVPWYPLETTQPASSACCNSFNP*NNLTGV
Trigger: TACCCCTGTGAGGTTGTTTCAAGGATTAAATGAGTT...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 2 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAATTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGAGCTTCTGAGCAGCTaGAGCCTGGGGTTGTGGCTA +
Preference number: 2 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCELLSS*SLGLWL
Trigger: TAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: QTTPDMCMSQQTALALRGMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 2 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGATGTGGACCATGCAGATaGTTTTTCAGCCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGCGPCR*FFSPAH
Trigger: GTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACA...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAA +
Preference number: 2 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSLACAW*GEKRVQ
Trigger: TTGCACCCTCTTCTCACCTCACCATGCACATGCTAA...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCATGGGTGTGATGACCTaGGTAGATGCATGGACATTT +
Preference number: 2 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTMGVMT*VDAWTF
Trigger: AAATGTCCATGCATCTACTCAGGTCATCACACCCAT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGACACCAGTCCACGCACTaGCTCAGGCTTACTTCACTT +
Preference number: 2 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGHQSTH*LRLTSL
Trigger: AAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGG +
Preference number: 2 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIDKALP*HQSTHW
Trigger: CCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTC...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCATCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 2 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPSLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCCAGAGTCACATGATATaGCTGAGAACAGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCQSHMI*LRTARR
Trigger: CCTTCTGGCTGTTCTCAGCCATATCATGTGACTCTG...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSARVDN*DKQLSA
Trigger: AGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGC...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTARVDN*DKQLSA
Trigger: AGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 90 bp ACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTaGCTTTCTTTCCATTCCTCATCCAACTATTCAGAGTCACATGAT +
Preference number: 2 (lower is better)
Translates to: TADAGRRLPRDRLSS*LSFHSSSNYSESHD
Trigger: ATCATGTGACTCTGAATAGTTGGATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp GTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAGCAACACCCTACCTaGTCTCCCCACCTCTATGGCACAGAAAGAGAACAGACCTTGAAC +
Preference number: 2 (lower is better)
Translates to: VSGSICAPGKKQHPT*SPHLYGTEREQTLN
Trigger: GTTCAAGGTCTGTTCTCTTTCTGTGCCATAGAGGTGGGGAGACAAGGTAGGGTGTTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 2 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGTGCTGATGATGGACTaGCTTTACCATCCATCCTTC +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGVLMMD*LYHPSF
Trigger: GAAGGATGGATGGTAAAGGCAGTCCATCATCAGCAC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCACCGGCTCTCATCCTTaGTTTCTTTCCATTCCTCAT +
Preference number: 2 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTTGSHP*FLSIPH
Trigger: ATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGT...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCATGCTGGGCGGAGACTaGCACGTGACCGGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSMLGGD*HVTGSH
Trigger: ATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCAT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTTTCATTGTTATTCATaGGGAAACCCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFFHCYS*GNPVPG
Trigger: GCCTGGCACTGGGTTTCCCCATGAATAACAATGAAA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGCACACAAGGGCAACTaGAAGTGCTGCCATACAGAA +
Preference number: 2 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPAHKGN*KCCHTE
Trigger: TTCTGTATGGCAGCACTTTCAGTTGCCCTTGTGTGC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTGCCCTGTGCCTCTGTaGGGACAGCCGATGCTGGGC +
Preference number: 2 (lower is better)
Translates to: SPREIPRSRKVVHPLIFICPVPL*GQPMLG
Trigger: GCCCAGCATCGGCTGTCCGCACAGAGGCACAGGGCA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCAGGTGCTGGGACCACTaGTGCCTCCCTCCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSRCWDH*CLPPFS
Trigger: TGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCAGCTACGTGGGGCATaGTGGGTGGTGCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSQLRGA*WVVQRK
Trigger: CTTCCTTTGCACCACCCACCATGCCCCACGTAGCTG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp AGGCAGAGAAATGGAAACAAGATCCTGTTGACGTCACTGAGCCACTaGGATCAACCCAAACCTGAAACTCACCCCACCTTGGGACTTTCC +
Preference number: 2 (lower is better)
Translates to: RQRNGNKILLTSLSH*DQPKPETHPTLGLS
Trigger: GGAAAGTCCCAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCCAAGTGGCTCAGTGACGTCAACAGGATCTTGTTTCCATTTCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACACTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 2 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTLSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTCCCAGCCCACAGCCCTaGCCTGTGGGTAGTGGGATT +
Preference number: 2 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIPSPQP*PVGSGI
Trigger: AATCCCACTACCCACAGGGCAGGGCTGTGGGCTGGG...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACATCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: LVPLAAAFTTEMLSNISINKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAGGCSM*RRKRGC
Trigger: ACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCTCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSSLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp CAGGGTGCTCAGTCCCTCCTAGAGGCCACTTCACTTCTTCCCATATaGGCTCACAGCTGTGACTTTAAAACACAGAACGAGTGCATATCT +
Preference number: 2 (lower is better)
Translates to: QGAQSLLEATSLLPI*AHSCDFKTQNECIS
Trigger: AGATATGCACTCGTTCTGTGTTTTAAAGTCACAGCTGTGAGCCAATATGGGAAGAAGTGAAGTGGCCTCTAGGAGGGACTGAGCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR GCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 2 (lower is better)
Translates to: LVPLAAAFTTEMLSNISITTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGCCCAGATAAGAAGCTaGCTGGGAAAGAAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSAQIRS*LGKKGR
Trigger: CCTCCCTTTCTTTCCCAGGCAGCTTCTTATCTGGGC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGTCACAAATTTTACATaGACACCTTTGCCAGTTATG +
Preference number: 2 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNVTNFT*TPLPVM
Trigger: CATAACTGGCAAAGGTGTGCATGTAAAATTTGTGAC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCACTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp CAATATCTGGCCTCTCTTCTTTCTCCTACACACACAGCTAGACCTTaGCATCATTTCAGGTGGCTTGTGAGTTCTGGCCAGCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: QYLASLLSPTHTARP*HHFRWLVSSGQQNV
Trigger: CACATTCTGCTGGCCAGAACTCACAAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGTGTGTAGGAGAAAGAAGAGAGGCCAGATATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAACAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGATTCCATAAAAGAGTTTaGCAGTCAAAGAGAAGCATC +
Preference number: 2 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGFHKRV*QSKRSI
Trigger: GATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCTACCAAGATCCATCATaGGGGACAGGTTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSYQDPS*GTGSHS
Trigger: GCTATGGGAACCTGTCCCCCATGATGGATCTTGGTA...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCTAGACCTATGGAGTTaGAGTTTCTCCAGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSLDLWS*SFSSSH
Trigger: GTGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR TCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 2 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp TTTCACCGTATTAGCCAGGATGGTGAACATGCCTTTAATGCAGCCTaGAACAGGAATTGGCCAAGCCTTGCCAACTTGATAAGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: FHRISQDGEHAFNAA*NRNWPSLANLIRSK
Trigger: TTTGCTCCTTATCAAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGGCATGTTCACCATCCTGGCTAATACGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 90 bp GTCACAAATTTTACATGCACACCTTTGCCAGTTATGAGAATTGTGTaGCAAAGAGGAAGGAGTGGAGAGTTTACCAGCCAAGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VTNFTCTPLPVMRIV*QRGRSGEFTSQGLE
Trigger: CTCCAGCCCTTGGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGCAAAGGTGTGCATGTAAAATTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTATCACTTGAACATGGCTaGGGATCCTGCAAACAACCC +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLSLEHG*GSCKQP
Trigger: GGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGA...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR GCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTATCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 90 bp GACCCTCCCACATCCTTCCCATCTATGAGAGCCTGTAAACTCCTTTaGCTTAACCTTGTTTTAGTTAAGGTTTTAAACAGTTGCCACCAG +
Preference number: 2 (lower is better)
Translates to: DPPTSFPSMRACKLL*LNLVLVKVLNSCHQ
Trigger: CTGGTGGCAACTGTTTAAAACCTTAACTAAAACAAGGTTAAGCAAAAGGAGTTTACAGGCTCTCATAGATGGGAAGGATGTGGGAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 2 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: STATSIHHTRMYTPASKLLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 90 bp GTTCATATAGGAACACACCACACTGACACTCAGAAAGATGCCATATaGTCAGATGTGCCATTTATCTGTGTATTAGCCAGTCTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: VHIGTHHTDTQKDAI*SDVPFICVLASLQD
Trigger: ATCTTGGAGACTGGCTAATACACAGATAAATGGCACATCTGACAATATGGCATCTTTCTGAGTGTCAGTGTGGTGTGTTCCTATATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAGAGAGGAAGAGGAAGTaGAATGGTGTGAGAACATTC +
Preference number: 2 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTERKRK*NGVRTF
Trigger: GAATGTTCTCACACCATTTCACTTCCTCTTCCTCTC...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp CTCATAGGAGGTGCGGAGGAGCACCCAGTCCCGGTCTaGGGCCTCAGGCAAGTCCCAGCACACCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: LIGGAEEHPVPV*GLRQVPAHPRA
Trigger: GGCCCTGGGGTGTGCTGGGACTTGCCTGAGGCCTCAGACCGGGACTGGGTGCTCCTCCGCACCTCCTATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp AGATGGGTCAGGCCTGCAGGAGCCTTCCAGGAGCTCTaGCAGGGAGGGTCTGTGGCCACCCACTCCCCCAGG +
Preference number: 3 (lower is better)
Translates to: RWVRPAGAFQEL*QGGSVATHSPR
Trigger: CCTGGGGGAGTGGGTGGCCACAGACCCTCCCTGCCAGAGCTCCTGGAAGGCTCCTGCAGGCCTGACCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp AGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCCTGTaGCTCTGTGCGGACAGCCGATGCTGGGCGGAGACT +
Preference number: 3 (lower is better)
Translates to: SARWGVHRRPAL*LCADSRCWAET
Trigger: AGTCTCCGCCCAGCATCGGCTGTCCGCACAGAGGCACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp CAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTC +
Preference number: 3 (lower is better)
Translates to: QPLICACPSRLR*HSEAQRGHVRL
Trigger: GAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp GTCCTCACAGACACGGACACCCTCCCTCATAGGAGGTaGGGAGGAGCACCCAGTCCCGGTCTGAGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: VLTDTDTLPHRR*GGAPSPGLRPQ
Trigger: CTGAGGCCTCAGACCGGGACTGGGTGCTCCTCCGCACCTCCTATGAGGGAGGGTGTCCGTGTCTGTGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp AGGGAAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTaGGGAGTGCACAGGAGGCCTGCCCTGTGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: REGGDSGQASAR*GVHRRPALCLC
Trigger: ACAGAGGCACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp GGGTGTCCTGCAGACATGCTTGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: GCPADMLELQGV*VKPSWQPQEPS
Trigger: AGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp AGAGGGGACCAGGGTGTCCTGCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: RGDQGVLQTCLS*RGSESSPPGSH
Trigger: GTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp TCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCCCTGTCCACGCCTGTG +
Preference number: 3 (lower is better)
Translates to: SASRYGQAPMLL*LMERDALSTPV
Trigger: CACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCTCCCTGGGCTTGCAGT +
Preference number: 3 (lower is better)
Translates to: WPQEEPWPTVSG*PSWAGAPWACS
Trigger: ACTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp CAGCCAGCCCTGGGTACATGGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: QPALGTWPQEEP*PTVSGWPSWAG
Trigger: CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CAA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 3 (lower is better)
Translates to: AEERLSPGRGKWQASQPWGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CAA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGCCTACCCTGGCCCCTaGGCAGTTGATGGCCACTCT +
Preference number: 3 (lower is better)
Translates to: PLETTQPASSACCLTHCRAYPGP*AVDGHS
Trigger: AGAGTGGCCATCAACTGCCAAGGGGCCAGGGTAGGC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp TGCCAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCTGAGTCAAGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: CQWRGDQGVLQT*LSCRGSESSPP
Trigger: AGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp GTGCCTCTGTGCGGACAGCCGATGCTGGGCGGAGACTaGCACGTGACCGGCTCTCATCCTTGCTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: VPLCGQPMLGGD*HVTGSHPCFLS
Trigger: GGAAAGAAAGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp GGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATaGATGCCTGCCACCTCCCCAGTGGCCTCTGCATGG +
Preference number: 3 (lower is better)
Translates to: GSLPTLQPPTVT*MPATSPVASAW
Trigger: CCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp GGCGGAGACCTTCCCATGACAGCAGGATGCCTCAGGTaGTGGGACCACTGCTGCCTCCCTCCTTTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: GGDLPMTAGCLR*WDHCCLPPFSA
Trigger: TGCTGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp CCCAGGCCGGAGCGCAGTGGCTCGATCTTGGCTCGTTaGAACCTCTGTCTCCCGGGTTCAAGCGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRPERSGSILAR*NLCLPGSSDSP
Trigger: AGGAGAATCGCTTGAACCCGGGAGACAGAGGTTGCAACGAGCCAAGATCGAGCCACTGCGCTCCGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp CAGGCTTGCAGCCAACCGGACCTGTGTCACCCAACTTaGCAGCCCAGAGACCTCCCAGGGAAGTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: QACSQPDLCHPT*QPRDLPGKSFS
Trigger: GGAGAAGGACTTCCCTGGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAGGTCCGGTTGGCTGCAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp TGCCTGGAGCTTCTGAGCAGCTGCAGCCTGGGGTTGTaGCTAGGCACGGGGTGTGGTTGCAGAAGAACGGCT +
Preference number: 3 (lower is better)
Translates to: CLELLSSCSLGL*LGTGCGCRRTA
Trigger: AGCCGTTCTTCTGCAACCACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp GCCAGCCTTGCCAGTGGGAGCCAAGCAGGGCAGAAATaGGGGTCCCGGAGAGTCCTATCAGGCACTCTGCTT +
Preference number: 3 (lower is better)
Translates to: ASLASGSQAGQK*GSRRVLSGTLL
Trigger: AAGCAGAGTGCCTGATAGGACTCTCCGGGACCCCCATTTCTGCCCTGCTTGGCTCCCACTGGCAAGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp GGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGGATGCCAGTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: GSLYPRPTHRCG*PKADVWMPVER
Trigger: CCTCTCCACTGGCATCCAGACATCTGCTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp GCCCTGTGGAGCAGAAAGAAGGCTGACCAGAGGCTGTaGACCAGGCAAATCCACCCACCACAGACTGGGCCC +
Preference number: 3 (lower is better)
Translates to: ALWSRKKADQRL*TRQIHPPQTGP
Trigger: GGGCCCAGTCTGTGGTGGGTGGATTTGCCTGGTTCACAGCCTCTGGTCAGCCTTCTTTCTGCTCCACAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp CAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATGGAGGGAGGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: QKTVRPRWGVGE*LYVGCMEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp ATGGTACCCAGTTCCTGGCCGTCATGGGCACTGAGCTaGCTTCCTGCTGTGCCTCGTCAGTGCCTGCCTACA +
Preference number: 3 (lower is better)
Translates to: MVPSSWPSWALS*LPAVPRQCLPT
Trigger: TGTAGGCAGGCACTGACGAGGCACAGCAGGAAGGCAGCTCAGTGCCCATGACGGCCAGGAACTGGGTACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp ACTCACTGCAGACGAGTCCATCCACACCACAGGCCCTaGCCACTGGGCTTGAGACTACTCGGACCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: THCRRVHPHHRP*PLGLRLLGPRA
Trigger: TGCTCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGGGCCTGTGGTGTGGATGGACTCGTCTGCAGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTaGCTGACTCACTGCAGACGAGTCCATCCACACCAC +
Preference number: 3 (lower is better)
Translates to: PLETTQPASSAC*LTHCRRVHPHH
Trigger: GTGGTGTGGATGGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp GAAAGGTCTGCGTGCCCTAAGAGAGAGCTGCTGGCGTaGAGAGAGAAGCAGAGATGCCGACGACGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: ERSACPKRELLA*REKQRCRRRGG
Trigger: TCCTCCCCGTCGTCGGCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp CGGCACTCGTGTTCCCCTGCAGAGGAAAGGTCTGCGTaGCCTAAGAGAGAGCTGCTGGCGTGCAGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: RHSCSPAEERSA*PKRELLACREK
Trigger: CTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTCCTCTGCAGGGGAACACGAGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CCCAGCACACCCCAGGGCCTCTGTTCTCCTTATGAGTaGGACCAGATGGGGTCCACCAACCGTCCAAACGTG +
Preference number: 3 (lower is better)
Translates to: PSTPQGLCSPYE*DQMGSTNRPNV
Trigger: CACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACTCATAAGGAGAACAGAGGCCCTGGGGTGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CAGAGGAAAGGTCTGCGTGCCCTAAGAGAGAGCTGCTaGCGTGCAGAGAGAAGCAGAGATGCCGACGACGGG +
Preference number: 3 (lower is better)
Translates to: QRKGLRALRESC*RAERSRDADDG
Trigger: CCCGTCGTCGGCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGCACGCAGACCTTTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp TGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCTTTCTTTCCATTCCTC +
Preference number: 3 (lower is better)
Translates to: CADSRCWAETAT*PALILAFFPFL
Trigger: GAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp TGCTGGTCTGGGGTGATGTTGTGGCTGCTGGCCTTGTaGACCACTGCCCAAGTGCGTAGCTGCAGTGTGGGA +
Preference number: 3 (lower is better)
Translates to: CWSGVMLWLLAL*TTAQVRSCSVG
Trigger: TCCCACACTGCAGCTACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCCACAACATCACCCCAGACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp TCCAACACTGCAGCCACCTACAGTCACATGCATGCCTaGCACCTCCCCAGTGGCCTCTGCATGGAATCTCCC +
Preference number: 3 (lower is better)
Translates to: SNTAATYSHMHA*HLPSGLCMESP
Trigger: GGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp AACTCAAAGGGCGGGAGGGAACTCCAGGACCCCAGATaGCAAACTGGCTCACACCGTGGACAACCTCCCACA +
Preference number: 3 (lower is better)
Translates to: NSKGGRELQDPR*QTGSHRGQPPT
Trigger: TGTGGGAGGTTGTCCACGGTGTGAGCCAGTTTGCCATCTGGGGTCCTGGAGTTCCCTCCCGCCCTTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CAGGGCTCAACAGAGGTCCCTAAAGGACACAGGAGTTaGGGACACATGGGCTGCCAGGAGCATGAGTCCCCA +
Preference number: 3 (lower is better)
Translates to: QGSTEVPKGHRS*GHMGCQEHESP
Trigger: TGGGGACTCATGCTCCTGGCAGCCCATGTGTCCCCAACTCCTGTGTCCTTTAGGGACCTCTGTTGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAG +
Preference number: 3 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSGVGEC*YVGCME
Trigger: CTCCATGCATCCCACATACAAGCACTCCCCCACTCC...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CAA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCAC +
Preference number: 3 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNKPQAN*CGCGRH
Trigger: GTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGACCGGCTCTCATCCTaGCTTTCTTTCCATTCCTCA +
Preference number: 3 (lower is better)
Translates to: QVPWYPLETTQPASSACCDRLSS*LSFHSS
Trigger: TGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCGGGGAGGCTCGGGGTTaGTCTGTGGTAGACTCCTTC +
Preference number: 3 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGGEARG*SVVDSF
Trigger: GAAGGAGTCTACCACAGACAAACCCCGAGCCTCCCC...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGGGGAGGCTCGGGGTTaGTCTGTGGTAGACTCCTTC +
Preference number: 3 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNGEARG*SVVDSF
Trigger: GAAGGAGTCTACCACAGACAAACCCCGAGCCTCCCC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTAGCTGCAGCCTGGGGTaGTGGCTAGGCACGGGGTGT +
Preference number: 3 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCSCSLG*WLGTGC
Trigger: ACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCT...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CAA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTACATACCCTATCCCTaGGTTCCTCTGGCAGCCGCG +
Preference number: 3 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFYIPYP*VPLAAA
Trigger: CGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp GCTGATGCATCTGACATTTGGGCGGAGACCTTCCCATaGCAGCAGGATGCCTCAGGTGCTGGGACCACTGCT +
Preference number: 3 (lower is better)
Translates to: ADASDIWAETFP*QQDASGAGTTA
Trigger: AGCAGTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGCCCAAATGTCAGATGCATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp AAGTCCCAGCACACCCCAGGGCCTCTGTTCTCCTTATaGGTGGGACCAGATGGGGTCCACCAACCGTCCAAA +
Preference number: 3 (lower is better)
Translates to: KSQHTPGPLFSL*VGPDGVHQPSK
Trigger: TTTGGACGGTTGGTGGACCCCATCTGGTCCCACTCATAAGGAGAACAGAGGCCCTGGGGTGTGCTGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp TTAAGAAAAGGAGAGCCGGCTCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGCCATCAGGGCTTAATG +
Preference number: 3 (lower is better)
Translates to: LRKGEPALSEEP*PPRHRRHQGLM
Trigger: CATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCTCCTTTTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp GTGCTTGGGCCTAAATCAGCATCTACACACGCGGCCTaGAACCCTGGGTTCCATGCAAAGGCAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VLGPKSASTHAA*NPGFHAKAVWL
Trigger: CAGCCACACTGCCTTTGCATGGAACCCAGGGTTGCAGGCCGCGTGTGTAGATGCTGATTTAGGCCCAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp GGTGTAGCCTGGGCTTGCATACCTCCAAGGACAGGGTaGTCAGTCCCTCCTAGAGGCCACTTCACTTCTTCC +
Preference number: 3 (lower is better)
Translates to: GVAWACIPPRTG*SVPPRGHFTSS
Trigger: GGAAGAAGTGAAGTGGCCTCTAGGAGGGACTGAGCACCCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp ACAGTTTCAGGCTGGCCATCTTGGGCTGGGGCTCCCTaGGCTTGCAGTGGGGAGGGTCAGGATTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: TVSGWPSWAGAP*ACSGEGQDSNS
Trigger: AGAATTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAGCCTGAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp GGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCTaGGAGCCTTCCAACACTGCAGCCACCTACAGTCAC +
Preference number: 3 (lower is better)
Translates to: GSLMRLTPSLLC*EPSNTAATYSH
Trigger: GTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp CTGCTTCTGGGGGCTCCCGGGCAACTTTGGTTGTGTTaGTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAGC +
Preference number: 3 (lower is better)
Translates to: LLLGAPGQLWLC*FLVASALQARS
Trigger: GCTTCTTGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CAGAGGTCCCTAAAGGACACAGGAGTTGGGGACACATaGGCTGCCAGGAGCATGAGTCCCCAGAAACTGGCA +
Preference number: 3 (lower is better)
Translates to: QRSLKDTGVGDT*AARSMSPQKLA
Trigger: TGCCAGTTTCTGGGGACTCATGCTCCTGGCAGCCCATGTGTCCCCAACTCCTGTGTCCTTTAGGGACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp GCCTCCCTCCTTTCTCAGCAGTCGTCTATGTTCCTCTaGGACTGCTGGCTGAGAAGCCATCAGGTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: ASLLSQQSSMFL*DCWLRSHQVGS
Trigger: GGAACCCACCTGATGGCTTCTCAGCCAGCAGTCTCAGAGGAACATAGACGACTGCTGAGAAAGGAGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp ATCTGCGGAGATGGACAGGACAGGAGACTAAGGAGGTaGGAACCCTGGCCCACACCATCACTAAGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: ICGDGQDRRLRR*EPWPTPSLRAL
Trigger: AAGGGCCCTTAGTGATGGTGTGGGCCAGGGTTCTCACCTCCTTAGTCTCCTGTCCTGTCCATCTCCGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp ACATGGCTGAGGATCCTGCAAACAACCCCTGATATGTaGATGTCCCAGCAGACTGCGCTGGCACTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: TWLRILQTTPDM*MSQQTALALRG
Trigger: GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR GCA 72 bp AGTCACATGCATGCCTGCCACCTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAAATTCCACGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SHMHACHLPSGL*MESPREIPRSR
Trigger: CCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp AGCATCCCCGGCCTTCATCCCCCTCCTGGAGGATGCTaGATTTCACAGCCGCATGGTTTCAGTGGGATAAAG +
Preference number: 3 (lower is better)
Translates to: SIPGLHPPPGGC*ISQPHGFSGIK
Trigger: CTTTATCCCACTGAAACCATGCGGCTGTGAAATGCAGCATCCTCCAGGAGGGGGATGAAGGCCGGGGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp CATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTaGATACCTCCAAGGACAGGGTGCTCAGTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: HIIPDRKGVAWA*IPPRTGCSVPP
Trigger: AGGAGGGACTGAGCACCCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp GCAGACATATGGGAGAGGTCAGAGAACTGGCGAGCCTaGGCCTCTGAAGCAGAGAAGCAGAGGACATTCAGG +
Preference number: 3 (lower is better)
Translates to: ADIWERSENWRA*ASEAEKQRTFR
Trigger: CCTGAATGTCCTCTGCTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTCCCATATGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp CACCTACAGTCACATGCATGCCTGCCACCTCCCCAGTaGCCTCTGCATGGAATCTCCCAGAGAAATTCCACG +
Preference number: 3 (lower is better)
Translates to: HLQSHACLPPPQ*PLHGISQRNST
Trigger: CGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp AGGACCACTACCTCTCAGAGATGGAAAGGCTTGCCATaGTCCACGCAGCACAAAGCCCACCCCCAGCCATAT +
Preference number: 3 (lower is better)
Translates to: RTTTSQRWKGLP*STQHKAHPQPY
Trigger: ATATGGCTGGGGGTGGGCTTTGTGCTGCGTGGACCATGGCAAGCCTTTCCATCTCTGAGAGGTAGTGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CAGAGGAAGGGAGAAGAGTTCCTAGAGTGGAAACCCTaGGCTGTAAGCCCGGTTCTACCACCTCCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: QRKGEEFLEWKP*AVSPVLPPPSC
Trigger: ACAGCTGGGAGGTGGTAGAACCGGGCTTACAGCCCAGGGTTTCCACTCTAGGAACTCTTCTCCCTTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CCAGTGCCAAGGTTCACTTCCCTAAACCATGGGGCCTaGGGCACAGACCACTGCTGTCTTCCAATATCTGGC +
Preference number: 3 (lower is better)
Translates to: PVPRFTSLNHGA*GTDHCCLPISG
Trigger: GCCAGATATTGGAAGACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTGAACCTTGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp AGTCATGGAGTGAGGTTGGAAGGGATCCTCCAGCCCTaGCCAACAGTTTCACTGCAGCCTCATGAGAGACCC +
Preference number: 3 (lower is better)
Translates to: SHGVRLEGILQP*PTVSLQPHERP
Trigger: GGGTCTCTCATGAGGCTGCAGTGAAACTGTTGGCCAGGGCTGGAGGATCCCTTCCAACCTCACTCCATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGAAACTCACCCCACCTaGGGACTTTCCAGTTTCAAG +
Preference number: 3 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTETHPT*GLSSFK
Trigger: CTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTTC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp TTTACACACTTTAAGAAAAGGAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCGCCACCGGCGCCATCA +
Preference number: 3 (lower is better)
Translates to: FTHFKKRRAGSQ*RTMPTAPPAPS
Trigger: TGATGGCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCTCCTTTTCTTAAAGTGTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp CATTTCACAGCCGCATGGTTTCAGTGGGATAAAGCATaGGGAGGGGTGTGTCCGGGGATCCCTTCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: HFTAAWFQWDKA*GGVCPGIPSLA
Trigger: AGCAAGGGAAGGGATCCCCGGACACACCCCTCCTCATGCTTTATCCCACTGAAACCATGCGGCTGTGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp AGTGGGACCAGATGGGGTCCACCAACCGTCCAAACGTaGTATGCTGCTGTCTTCAGGGCACATTATCCCCAG +
Preference number: 3 (lower is better)
Translates to: SGTRWGPPTVQT*YAAVFRAHYPQ
Trigger: CTGGGGATAATGTGCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp GTCTGCAGGAGTGGATGGAGAGGCAGAACAAGCATTTaGGGACACTCAGGCTCTCTGGGTAGCAGACATGGC +
Preference number: 3 (lower is better)
Translates to: VCRSGWRGRTSI*GHSGSLGSRHG
Trigger: GCCATGTCTGCTACCCAGAGAGCCTGAGTGTCCTCAAATGCTTGTTCTGCCTCTCCATCCACTCCTGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp AGGCTGGACCCACAACAGGAAAGGAACCTGGGTCCATaGAAGACTGTGTGGAGCAGAGAATCCCCCACCCTA +
Preference number: 3 (lower is better)
Translates to: RLDPQQERNLGP*KTVWSRESPTL
Trigger: TAGGGTGGGGGATTCTCTGCTCCACACAGTCTTTCATGGACCCAGGTTCCTTTCCTGTTGTGGGTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATaGTGCTGTCTTCAGGGCACATTATCCCCAGCGTTG +
Preference number: 3 (lower is better)
Translates to: DQMGSTNRPNVI*CCLQGTLSPAL
Trigger: CAACGCTGGGGATAATGTGCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: LWVDSRGMQSQV*AGNKGDPWSSA
Trigger: TGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
3UTR CCA 72 bp ATTGGGATAAGCAGCTTTCAGCTACGTGGGGCATGGTaGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: IGISSFQLRGAW*VVQRKGYRQPR
Trigger: TCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp ACAATTGGGATAAGCAGCTTTCAGCTACGTGGGGCATaGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCC +
Preference number: 3 (lower is better)
Translates to: TIGISSFQLRGA*WVVQRKGYRQP
Trigger: GGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp GATGACAGAGGGAAGTGTCTCTACCAAGATCCATCATaGGGGACAGGTTCCCATAGCCCCGGACACACAACC +
Preference number: 3 (lower is better)
Translates to: DDRGKCLYQDPS*GTGSHSPGHTT
Trigger: GGTTGTGTGTCCGGGGCTATGGGAACCTGTCCCCCATGATGGATCTTGGTAGAGACACTTCCCTCTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGACCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTG +
Preference number: 3 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGPMLLC*MERDAL
Trigger: CAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGG...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR-3UTR CAA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 3 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp CACTTGAACATGGCTGAGGATCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCAGACTGCGCTGGCACT +
Preference number: 3 (lower is better)
Translates to: HLNMAEDPANNP*YVHVPADCAGT
Trigger: AGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp GCACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTGCAAACAACCCCTGAT +
Preference number: 3 (lower is better)
Translates to: APVHALAQAYFT*TWLRILQTTPD
Trigger: ATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp AGAGAAGCAAAGTTCAGCGGTTTGGGATGCAGCCACTaGGGTGTCTGCAGGAGTGGATGGAGAGGCAGAACA +
Preference number: 3 (lower is better)
Translates to: REAKFSGLGCSH*GVCRSGWRGRT
Trigger: TGTTCTGCCTCTCCATCCACTCCTGCAGACACCTCAGTGGCTGCATCCCAAACCGCTGAACTTTGCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp CGTAGCTGCAGTGTGGGAGTTACTATCCCATTTTGCTaGGGAAATGGTACCCAGTTCCTGGCCGTCATGGGC +
Preference number: 3 (lower is better)
Translates to: RSCSVGVTIPFC*GNGTQFLAVMG
Trigger: GCCCATGACGGCCAGGAACTGGGTACCATTTCCTCAGCAAAATGGGATAGTAACTCCCACACTGCAGCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp TCACTTATAGCGGGGGATAAACCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACAAGGGCAACTGAAAGT +
Preference number: 3 (lower is better)
Translates to: SLIAGDKPQANL*GCGRHTRATES
Trigger: ACTTTCAGTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTTATCCCCCGCTATAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp CAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTaGTGTCTTCAGGGCACATTATCCCCAGCGTTGATG +
Preference number: 3 (lower is better)
Translates to: QMGSTNRPNVIC*CLQGTLSPALM
Trigger: CATCAACGCTGGGGATAATGTGCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp CAGAGTGGCTGGCCCTTACCTAGGGCACCTGGTGGATaGTCTAACCCTCAGGATTCACTTTTCACCATGAGA +
Preference number: 3 (lower is better)
Translates to: QSGWPLPRAPGG*SNPQDSLFTMR
Trigger: TCTCATGGTGAAAAGTGAATCCTGAGGGTTAGAGCATCCACCAGGTGCCCTAGGTAAGGGCCAGCCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp ACTTCCCTAAACCATGGGGCCTGGGGCACAGACCACTaGTGTCTTCCAATATCTGGCCTCTCTTCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TSLNHGAWGTDH*CLPISGLSSFS
Trigger: GGAGAAAGAAGAGAGGCCAGATATTGGAAGACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp AGGAAATCCAGTGCCAAGGTTCACTTCCCTAAACCATaGGGCCTGGGGCACAGACCACTGCTGTCTTCCAAT +
Preference number: 3 (lower is better)
Translates to: RKSSAKVHFPKP*GLGHRPLLSSN
Trigger: ATTGGAAGACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTGAACCTTGGCACTGGATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACTCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 3 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNSGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAATCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 3 (lower is better)
Translates to: VLWTDTRKTLELERPTCESGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR GCA 72 bp TTCCTGCTGTGCCTCGTCAGTGCCTGCCTACATCGTTaGTCATTGATCATGGCCTGCGAGTTAGTGTCATCA +
Preference number: 3 (lower is better)
Translates to: FLLCLVSACLHR*SLIMACELVSS
Trigger: TGATGACACTAACTCGCAGGCCATGATCAATGAGCAACGATGTAGGCAGGCACTGACGAGGCACAGCAGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp TGTTGTGGCTGCTGGCCTTGTGAACCACTGCCCAAGTaGGTAGCTGCAGTGTGGGAGTTACTATCCCATTTT +
Preference number: 3 (lower is better)
Translates to: CCGCWPCEPLPK*VAAVWELLSHF
Trigger: AAAATGGGATAGTAACTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp GCAGTATGTGGAGGAGAAAGAGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCG +
Preference number: 3 (lower is better)
Translates to: AVCGGEREAVVG*FLRHSRGLKGS
Trigger: CGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTCTCTTTCTCCTCCACATACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp TTGTATGTGGGATGCATGGAGGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGTTGTGGGCTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LYVGCMEGGCSM*RRKRGCCGLVL
Trigger: AAGAACCAGCCCACAACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCCCTCCATGCATCCCACATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CCA 72 bp AGAGTTGACAATTGGGATAAGCAGCTTTCAGCTACGTaGGGCATGGTGGGTGGTGCAAAGGAAGGGGTACAG +
Preference number: 3 (lower is better)
Translates to: RVDNWDKQLSAT*GMVGGAKEGVQ
Trigger: CTGTACCCCTTCCTTTGCACCACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp GTGCTACAGAGGCTGAAGAAGGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCTACGTGGGGCATGGTG +
Preference number: 3 (lower is better)
Translates to: VLQRLKKARVDN*DKQLSATWGMV
Trigger: CACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp TGTTATTCATGGGGAAACCCAGTGCCAGGCTTCTTGTaGACCATGCAGATGGTTTTTCAGCCCAGCCCACAG +
Preference number: 3 (lower is better)
Translates to: CYSWGNPVPGFL*TMQMVFQPSPQ
Trigger: CTGTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACAAGAAGCCTGGCACTGGGTTTCCCCATGAATAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp GACTCCTCTGGTACAAAGGCAAGGCCCATCTGTTCTTaGCACACTCCTACAACTGATGGCGTGACCGTGAAA +
Preference number: 3 (lower is better)
Translates to: DSSGTKARPICS*HTPTTDGVTVK
Trigger: TTTCACGGTCACGCCATCAGTTGTAGGAGTGTGCCAAGAACAGATGGGCCTTGCCTTTGTACCAGAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CAAACCAGACCTTCCTATGCCAGGAAGGCTAGGAAGTaGCAATGGAGAAACCATCCATGTTCCCTGGGGTTC +
Preference number: 3 (lower is better)
Translates to: QTRPSYARKARK*QWRNHPCSLGF
Trigger: GAACCCCAGGGAACATGGATGGTTTCTCCATTGCCACTTCCTAGCCTTCCTGGCATAGGAAGGTCTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR-3UTR CAA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGCAAGTAAATTAAGGTaGCAGTCCATCCCTGAACGA +
Preference number: 3 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFASKLR*QSIPER
Trigger: TCGTTCAGGGATGGACTGCAACCTTAATTTACTTGC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR-3UTR CAA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCTCTAGACCTATGGAGTaGAAGTTTCTCCAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: THSSCSSSAQASIPCPHFSRPME*KFLQLS
Trigger: TGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAGA...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp AAAGACCCCAAGGCTTTAAAGTTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAAATGCCACAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: KDPKALKLACAW*GEKRVQMPQLA
Trigger: GGCCAGCTGTGGCATTTGCACCCTCTTCTCACCTCACCATGCACATGCTAACTTTAAAGCCTTGGGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp ACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTaGAGAAGGCCAGAGTTGACAATTGGGATAAGCAGC +
Preference number: 3 (lower is better)
Translates to: TFRRCSVWCYRG*RRPELTIGISS
Trigger: GCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp CAGCCTGGCAGCTTTGTGCCCACAGTAGATTTTCTATaGGGACCTCTCACTGATGCACTTGAGTGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: QPGSFVPTVDFL*GPLTDALEWQR
Trigger: TCTCTGCCACTCAAGTGCATCAGTGAGAGGTCCTCATAGAAAATCTACTGTGGGCACAAAGCTGCCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp AAAGTAATACTGGCTGAGGGAGTGGGCTGTGGTGGCTaGTTCTGTCTGCCTAGTGAGCATCTCCATACTCCA +
Preference number: 3 (lower is better)
Translates to: KVILAEGVGCGG*FCLPSEHLHTP
Trigger: TGGAGTATGGAGATGCTCACTAGGCAGACAGAATCAGCCACCACAGCCCACTCCCTCAGCCAGTATTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp AAGAAAACACTATGGTCCTTCCTGCTGACAGCTGAGTaGTTGGGCCTAAATCAGCATCTACACACGCGGCCT +
Preference number: 3 (lower is better)
Translates to: KKTLWSFLLTAE*LGLNQHLHTRP
Trigger: AGGCCGCGTGTGTAGATGCTGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAGGACCATAGTGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp GGAGGTGGCCATACAACCCAAGGTTGTGGCCCACCTTaGCCCAAATCTCATCAAAACTCATGCTGTGAGATT +
Preference number: 3 (lower is better)
Translates to: GGGHTTQGCGPP*PKSHQNSCCEI
Trigger: AATCTCACAGCATGAGTTTTGATGAGATTTGGGGCAAGGTGGGCCACAACCTTGGGTTGTATGGCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp ATCCATCCTTCTGTAAGGTCTACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGC +
Preference number: 3 (lower is better)
Translates to: IHPSVRSTYPIP*FLWQPRLPLRC
Trigger: GCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTAGACCTTACAGAAGGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp GCCAGTTATGAGAATTGTGTTGCAAAGAGGAAGGAGTaGAGAGTTTACCAGCCAAGGGCTGGAGGACCCCAA +
Preference number: 3 (lower is better)
Translates to: ASYENCVAKRKE*RVYQPRAGGPQ
Trigger: TTGGGGTCCTCCAGCCCTTGGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp ACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTaGGGATCCTGCAAACAACCCCTGATATGTGCATGT +
Preference number: 3 (lower is better)
Translates to: THWLRLTSLEHG*GSCKQPLICAC
Trigger: ACATGCACATATCAGGGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR TCA 72 bp GTTGACGTCACTGAGCCACTTGGATCAACCCAAACCTaGAACTCACCCCACCTTGGGACTTTCCAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: VDVTEPLGSTQT*NSPHLGTFQFQ
Trigger: TTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCCAAGTGGCTCAGTGACGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp CTAGAAGAAAACACTATGGTCCTTCCTGCTGACAGCTaGGTGCTTGGGCCTAAATCAGCATCTACACACGCG +
Preference number: 3 (lower is better)
Translates to: LEENTMVLPADS*VLGPKSASTHA
Trigger: CGCGTGTGTAGATGCTGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAGGACCATAGTGTTTTCTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp GAGGACACTCAGGCTCTCTGGGTAGCAGACATGGCCTaGGTGATTTCATTTACTACTGAGAGGACAGTGAGT +
Preference number: 3 (lower is better)
Translates to: EDTQALWVADMA*VISFTTERTVS
Trigger: ACTCACTGTCCTCTCAGTAGTAAATGAAATCACTCAGGCCATGTCTGCTACCCAGAGAGCCTGAGTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp AGTGCCTGCCTACATCGTTGCTCATTGATCATGGCCTaGGAGTTAGTGTCATCAGAGGAAGGGAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: SACLHRCSLIMA*ELVSSEEGRRV
Trigger: AACTCTTCTCCCTTCCTCTGATGACACTAACTCGCAGGCCATGATCAATGAGCAACGATGTAGGCAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CCAGTCTCCAAGATGGTTCCAATGATGCTTTCCTCCTaGAACTCACACCCTTGCATAGTCACTCTCGCATCT +
Preference number: 3 (lower is better)
Translates to: PVSKMVPMMLSS*NSHPCIVTLAS
Trigger: AGATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCAGGAGGAAAGCATCATTGGAACCATCTTGGAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp AGTGACCAAATCTGGAGGGCACTGAAGGAATTCATGTaGCGTCTGTCCCTTAATCTGAACACAGAGCACACA +
Preference number: 3 (lower is better)
Translates to: SDQIWRALKEFM*RLSLNLNTEHT
Trigger: TGTGTGCTCTGTGTTCAGATTAAGGGACAGACGGCACATGAATTCCTTCAGTGCCCTCCAGATTTGGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR GCA 72 bp GTTCCAATGATGCTTTCCTCCTGGAACTCACACCCTTaGATAGTCACTCTCGCATCTATTAGGGTTGGTCTG +
Preference number: 3 (lower is better)
Translates to: VPMMLSSWNSHP*IVTLASIRVGL
Trigger: CAGACCAACCCTAATAGATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCAGGAGGAAAGCATCATTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp TCTGTAAGGTCTACATACCCTATCCCTTGGTTCCTCTaGCAGCCGCGTTTACCACTGAGATGCTTAGCAATA +
Preference number: 3 (lower is better)
Translates to: SVRSTYPIPWFL*QPRLPLRCLAI
Trigger: TATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTAGACCTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CCA 72 bp CCTACACACACAGCTAGACCTTTGCATCATTTCAGGTaGCTTGTGAGTTCTGGCCAGCAGAATGTGAGAACA +
Preference number: 3 (lower is better)
Translates to: PTHTARPLHHFR*LVSSGQQNVRT
Trigger: TGTTCTCACATTCTGCTGGCCAGAACTCACAAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGTGTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp GGTTTTCTATTACCTGCAACTGTAAATGGACTCCTCTaGTACAAAGGCAAGGCCCATCTGTTCTTGGCACAC +
Preference number: 3 (lower is better)
Translates to: GFLLPATVNGLL*YKGKAHLFLAH
Trigger: GTGTGCCAAGAACAGATGGGCCTTGCCTTTGTACCAGAGGAGTCCATTTACAGTTGCAGGTAATAGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp CACTTCCACTGCCTCAGAACAAAACCCTGGATTTCCTaGCCTTCCAGCAGTCCATGTGTATTTTCAAATACC +
Preference number: 3 (lower is better)
Translates to: HFHCLRTKPWIS*PSSSPCVFSNT
Trigger: GGTATTTGAAAATACACATGGACTGCTGGAAGGTCAGGAAATCCAGGGTTTTGTTCTGAGGCAGTGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp TCAGATGAGACTTTTAGAACAGACCCGACATTCTGTTaGCTTAGAAGAGCTGATGTCATCCTCAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: SDETFRTDPTFC*LRRADVILRAQ
Trigger: CTGGGCTCTGAGGATGACATCAGCTCTTCTAAGTCAACAGAATGTCGGGTCTGTTCTAAAAGTCTCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CCACCATGTAAGGATCAGCAACAGCAGGTGAGAGTCTaGAGTAGTTTCTGCCTTGTCTCCACTGAAAAATTA +
Preference number: 3 (lower is better)
Translates to: PPCKDQQQQVRV*SSFCLVSTEKL
Trigger: TAATTTTTCAGTGGAGACAAGGCAGAAACTACTCCAGACTCTCACCTGCTGTTGCTGATCCTTACATGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp CTGCCTGTGTCCTATTTTAAAAGTGGCTCTGCTGGATaGACAAGTGGTGGAAGGAAATTTGGAATAAGCAAC +
Preference number: 3 (lower is better)
Translates to: LPVSYFKSGSAG*TSGGRKFGISN
Trigger: GTTGCTTATTCCAAATTTCCTTCCACCACTTGTCCATCCAGCAGAGCCACTTTTAAAATAGGACACAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp ATGATATGGCTGAGAACAGCCAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTGCAAAAATCGCACCGA +
Preference number: 3 (lower is better)
Translates to: MIWLRTARRVYS*KINPTLQKSHR
Trigger: TCGGTGCGATTTTTGCAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCTGGCTGTTCTCAGCCATATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR TCA 72 bp GTGGATGCTCTAACCCTCAGGATTCACTTTTCACCATaGGATATTGACTCCTTTAAATTTCTGCCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: VDALTLRIHFSP*DIDSFKFLPVS
Trigger: GGACACAGGCAGAAATTTAAAGGAGTCAATATCTCATGGTGAAAAGTGAATCCTGAGGGTTAGAGCATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp CTTCTACATAAAATCCTTTCAAATCTGAAGTCCATATaGCCAATGATGGCCAGACAGCCCTGTCATCTCAGC +
Preference number: 3 (lower is better)
Translates to: LLHKILSNLKSI*PMMARQPCHLS
Trigger: GCTGAGATGACAGGGCTGTCTGGCCATCATTGGTCATATGGACTTCAGATTTGAAAGGATTTTATGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp CAGTCACAAATTTTACATGCACACCTTTGCCAGTTATaGGAATTGTGTTGCAAAGAGGAAGGAGTGGAGAGT +
Preference number: 3 (lower is better)
Translates to: QSQILHAHLCQL*ELCCKEEGVES
Trigger: ACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGCAAAGGTGTGCATGTAAAATTTGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR TCA 72 bp TTAATAGCATTAAGTTCATATAGGAACACACCACACTaGCACTCAGAAAGATGCCATATTGTCAGATGTGCC +
Preference number: 3 (lower is better)
Translates to: LIALSSYRNTPH*HSERCHIVRCA
Trigger: GGCACATCTGACAATATGGCATCTTTCTGAGTGTCAGTGTGGTGTGTTCCTATATGAACTTAATGCTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CCA 72 bp ACAGATTTATGGTTCATTGTGATTTCTCTTTTGAACTaGCTGTTAATCTTAGCAGCACTCTCAATTACTGAG +
Preference number: 3 (lower is better)
Translates to: TDLWFIVISLLN*LLILAALSITE
Trigger: CTCAGTAATTGAGAGTGCTGCTAAGATTAACAGCCAGTTCAAAAGAGAAATCACAATGAACCATAAATCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGGCTCTGCCTGCTGCCTaGCTCACTGCAGACGAGTCC +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRALPAA*LTADES
Trigger: GGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGC...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCAGGCCAGTGCTAGGTaGGGAGTGCACAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRQASAR*GVHRRP
Trigger: AGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGGCGGAGACCTTCCCATaGCAGCAGGATGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRAETFP*QQDASG
Trigger: ACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGC...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCATGACAGCAGGATaGCTCAGGTGCTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRPMTAG*LRCWDH
Trigger: GTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGAGCCTCCGGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMSLRSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCTCCCAGGTCCCCTaGTACCCACTAGAGACCACA +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRPSQVP*YPLETT
Trigger: TGTGGTCTCTAGTGGGTACCAGGGGACCTGGGAGGG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGTCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRSCRHA*AAGGLS
Trigger: ACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGA...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCGGCGAACCCCAGGGTaGACATCACCACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPRRTPG*TSPRPP
Trigger: TGGTGGGCGTGGTGATGTTCACCCTGGGGTTCGCCG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCCCTACCAGTACAGCTaGAAGCTCTGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMPYQYS*KLWTSG
Trigger: CCCGCTGGTCCAGAGCTTTCAGCTGTACTGGTAGGG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCCCATGACAGCAGGATaGCTCAGGTGCTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMPMTAG*LRCWDH
Trigger: GTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGGTGAGTGCCCCGGGCTaGCTCCCAGAGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWVSAPG*LPEWLA
Trigger: GGCCAGCCACTCTGGGAGGCAGCCCGGGGCACTCAC...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCCAAAATCGGGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMPKSGH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCCCGATTTTGG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGAGAAGAGGGTGCAAATaGCACAGCTGGCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRRRGCK*HSWPPT
Trigger: GGTTGGAGGCCAGCTGTGGCATTTGCACCCTCTTCT...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGCAGGATGCCTCAGGTaGTGGGACCACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLAGCLR*WDHCCL
Trigger: GAGGCAGCAGTGGTCCCAGCACCTGAGGCATCCTGC...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTCCCCCTCCTGGAGGATaGTGCATTTCACAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFPPPGG*CISQPH
Trigger: ATGCGGCTGTGAAATGCAGCATCCTCCAGGAGGGGG...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGAGACCCAAGAGCTACTaGTCAGCCTACCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMRPKSY*SAYPSP
Trigger: TGGGGAGGGGTAGGCTGAGCAGTAGCTCTTGGGTCT...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGATCCTGAGAGGGGGTaGACCAGGGTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLDPERG*TRVEEG
Trigger: CCCCTCCTCAACCCTGGTCCACCCCCTCTCAGGATC...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGAGTTCCTGGCCGTCATaGGCACTGAGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMSSWPS*ALSCLP
Trigger: AGGAAGGCAGCTCAGTGCCCATGACGGCCAGGAACT...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTAGTTCCTGGCCGTCATaGGCACTGAGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFSSWPS*ALSCLP
Trigger: AGGAAGGCAGCTCAGTGCCCATGACGGCCAGGAACT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCAGCAGCCACAGCCCTaGTTCCTCTCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMQQPQP*FLSVCD
Trigger: GTCACAGACTGAGAGGAACCAGGGCTGTGGCTGCTG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGTGTGCGGACAGCCGATaGTGGGCGGAGACTGCCACG +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWCADSR*WAETAT
Trigger: CGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACA...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGGCCCTTCCTGAGGTCTaGTTCCCACATGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMALPEV*FPHEVL
Trigger: GAGGACTTCATGTGGGAAGCAGACCTCAGGAAGGGC...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALAPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRGGCSM*RRKRGC
Trigger: ACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCC...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFTYPIP*FLWQPR
Trigger: ACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCGGCGAACCCCAGGGTaGACATCACCACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDRRTPG*TSPRPP
Trigger: TGGTGGGCGTGGTGATGTTCACCCTGGGGTTCGCCG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTTGGTGCTACAGAGGCTaGAGAAGGCCAGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFWCYRG*RRPELT
Trigger: TGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCA...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTACCACCCCAGTGGCTTaGGTGTTTCTCCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFTTPVA*VFLRFF
Trigger: AAAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCACACACTGGCGGTGGTaGGGCTCCTTCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVTHWRW*GSFQQP
Trigger: TGGCTGCTGGAAGGAGCCTCACCACCGCCAGTGTGT...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTTGTGCGGACAGCCGATaGTGGGCGGAGACTGCCACG +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALACADSR*WAETAT
Trigger: CGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACA...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGAGGAGGCCTGCCCTGTaGCTCTGTGCGGACAGCCGA +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLRRPAL*LCADSR
Trigger: TCGGCTGTCCGCACAGAGGCACAGGGCAGGCCTCCT...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCCCAGCCCACAGCCCTaGCCTGTGGGTAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVPSPQP*PVGSGI
Trigger: AATCCCACTACCCACAGGGCAGGGCTGTGGGCTGGG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTAGAGATGGAAAGGCTTaGCATGGTCCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFRDGKA*HGPRST
Trigger: TGTGCTGCGTGGACCATGGCAAGCCTTTCCATCTCT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACTTCTGGCCCCAGATaGCCCAGTGCCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMTSGPR*PSASLT
Trigger: GGTGAGGCTGGCACTGGGGCATCTGGGGCCAGAAGT...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGGACACAGGGGGACAGTaGACAAGGCACTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWDTGGQ*TRHSRG
Trigger: GCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGTC...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALALRGPAGPRPPPVTGREAVVG*FLRHSR
Trigger: CCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTC...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGGGATGCCTCAGGTGCTaGGACCACTGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWGCLRC*DHCCLP
Trigger: AGGGAGGCAGCAGTGGTCCCAGCACCTGAGGCATCC...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGATGGTACCCAGTTCCTaGCCGTCATGGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPMVPSS*PSWALS
Trigger: GCTCAGTGCCCATGACGGCCAGGAACTGGGTACCAT...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGCTCTGGCACTGGTGTaGAGAGGGCACTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVALALV*RGHWES
Trigger: GCTCTCCCAGTGCCCTCTCCACACCAGTGCCAGAGC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGAATGCCTGGAGCTTCTaGGCAGCTGCAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWNAWSF*AAAAWG
Trigger: ACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCATT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGTCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCT +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVSGSLW*GRTAHP
Trigger: AGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGA...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGAGCTATCTGACATGTaGCCCAGGCAGCTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLELSDM*PRQLSR
Trigger: ACGAGAGAGCTGCCTGGGTCACATGTCAGATAGCTC...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCGGCGGGTGGATCACCTaGGGTCAGGAGTATGAGACC +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSGGWIT*GQEYET
Trigger: GGTCTCATACTCCTGACCTCAGGTGATCCACCCGCC...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGGTCTGCTTCCCACATaGAGTCCTCCCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDGLLPT*SPPRAL
Trigger: CAGGGCCCTGGGAGGACTTCATGTGGGAAGCAGACC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGAGCACTTTGGGAGGCTaGGGCCGGCGGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRSTLGG*GRREVR
Trigger: CCTGACCTCCCGCCGGCCTCAGCCTCCCAAAGTGCT...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLVFRAI*ATALVS
Trigger: GCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGATGCTGGGCGGAGACTaGCACGTGACCGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWMLGGD*HVTGSH
Trigger: ATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCAT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTCTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLLPSGL*MESPRE
Trigger: TTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAG...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCGAGCCCAGGCTGGAGTaGAGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVEPRLE*SGVISA
Trigger: AGCCGAGATCACACCACTGCACTCCAGCCTGGGCTC...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTAGAGAGCTGCTGGCGTaGAGAGAGAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLRELLA*REKQRC
Trigger: GCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCT...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGCCCCAGAGAGGGACCTaGAGGCAAACCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMPQRGT*RQTRPS
Trigger: GGAAGGTCTGGTTTGCCTGCAGGTCCCTCTCTGGGG...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACACAGTGAGGCCACGCTaGGGAGTGGGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDTVRPR*GVGECL
Trigger: CAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGT...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCTACGTGGGGCATGGTaGGTGGTGCAAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWLRGAW*VVQRKG
Trigger: CCCCTTCCTTTGCACCACCCACCATGCCCCACGTAG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCTGCCACCTCCCCAGTaGCCTCTGCATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVLPPPQ*PLHGIS
Trigger: GGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGAGTGGCTCTGCTGGATaGACAAGTGGTGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMSGSAG*TSGGRK
Trigger: TTTCCTTCCACCACTTGTCCATCCAGCAGAGCCACT...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGCCTCCCAGAGTGGCTaGCCCTTACCTAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDASQSG*PLPRAP
Trigger: AGGTGCCCTAGGTAAGGGCCAGCCACTCTGGGAGGC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CAGTGGAGAGGGGACCAGGGTGTCCTGCAGACATGCTaGAGCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QWRGDQGVLQTC*SCRGSESSPPG
Trigger: GCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACCCTGGTCCCCTCTCCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 72 bp GTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGCCCTGTCCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: VRLPLRAGPHAA*LDGERCPVHAC
Trigger: ACAGGCGTGGACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCGGCGAACCCCAGGGTaGACATCACCACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRRRTPG*TSPRPP
Trigger: TGGTGGGCGTGGTGATGTTCACCCTGGGGTTCGCCG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACGGCGAACCCCAGGGTaGACATCACCACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRRRTPG*TSPRPP
Trigger: TGGTGGGCGTGGTGATGTTCACCCTGGGGTTCGCCG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTCGTCCCGGTAGGACTTaGTGTTGCTCTCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLRPGRT*CCSRRT
Trigger: AGTTCTTCGAGAGCAACATCAAGTCCTACCGGGACG...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCCCTACCAGTACAGCTaGAAGCTCTGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCPYQYS*KLWTSG
Trigger: CCCGCTGGTCCAGAGCTTTCAGCTGTACTGGTAGGG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCGCTGACCAGAGGCTGTaGACCAGGCAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSADQRL*TRQIHP
Trigger: TGGGTGGATTTGCCTGGTTCACAGCCTCTGGTCAGC...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGAGGAACACACCACACTaGCACTCAGAAAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMRNTPH*HSERCH
Trigger: ATGGCATCTTTCTGAGTGTCAGTGTGGTGTGTTCCT...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWRLPQL*SSEVMA
Trigger: GGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCCGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSRLPQL*SSEVMA
Trigger: GGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCG...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVLDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAGGGGCTCCCTGGGCTTaGAGTGGGGAGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRGAPWA*SGEGQD
Trigger: ATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCC...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACA +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDPQANL*GCGRHT
Trigger: TGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGAGTGCACAGGAGGCCTaGCCTGTGCCTCTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGSAQEA*PVPLCG
Trigger: TCCGCACAGAGGCACAGGGCAGGCCTCCTGTGCACT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCTACAGTCACATGCATaGCTGCCACCTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVLQSHA*LPPPQW
Trigger: CCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGTGCTGGGACCACTGCTaGCTCCCTCCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWCWDHC*LPPFSA
Trigger: TGCTGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCA...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCAGGTGCTGGGACCACTaGTGCCTCCCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVRCWDH*CLPPFS
Trigger: TGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCT...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCGTGAGTGCCCCGGGCTaGCTCCCAGAGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCVSAPG*LPEWLA
Trigger: GGCCAGCCACTCTGGGAGGCAGCCCGGGGCACTCAC...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGATCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGACAGTGAGGCCACGCTaGGGAGTGGGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGTVRPR*GVGECL
Trigger: CAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGCCAGCCCTGGGTACATaGCCACAAGAGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGPALGT*PQEEPW
Trigger: CCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGG...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTAGGCATCTAGTGAGGTaGGCACTGCCACCAACCCCC +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALARHLVR*ALPPTP
Trigger: GGGGGTTGGTGGCAGTGCCCACCTCACTAGATGCCT...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCAGCTACGTGGGGCATaGTGGGTGGTGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVQLRGA*WVVQRK
Trigger: CTTCCTTTGCACCACCCACCATGCCCCACGTAGCTG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGGCCCCAGGCCTCTGTaGCCTACCCTGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFGPRPL*PTLAPW
Trigger: CCAAGGGGCCAGGGTAGGCCACAGAGGCCTGGGGCC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTAGGTGTCTGCAGGAGTaGATGGAGAGGCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLRCLQE*MERQNK
Trigger: CTTGTTCTGCCTCTCCATCCACTCCTGCAGACACCT...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCCAGCTGCTGCTGGTCTaGGGTGATGTTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSQLLLV*GDVVAA
Trigger: AGCAGCCACAACATCACCCCAGACCAGCAGCAGCTG...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCCTGCCTCGGTCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCPASVS*VAGITG
Trigger: GCCTGTAATCCCAGCTACCCAGGAGACCGAGGCAGG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCAAGCAGGGCAGAAATaGGGGTCCCGGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWQAGQK*GSRRVL
Trigger: TAGGACTCTCCGGGACCCCCATTTCTGCCCTGCTTG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGCAAGCAGGGCAGAAATaGGGGTCCCGGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMQAGQK*GSRRVL
Trigger: TAGGACTCTCCGGGACCCCCATTTCTGCCCTGCTTG...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWTARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMEVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLQAYFT*TWLRIL
Trigger: CAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTG...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCCCTACCAGTACAGCTaGAAGCTCTGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKPYQYS*KLWTSG
Trigger: CCCGCTGGTCCAGAGCTTTCAGCTGTACTGGTAGGG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACACTCCAAATGCCTGCTaGGGCTTGCCACAGACCTCG +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDTPNAC*GLPQTS
Trigger: CGAGGTCTGTGGCAAGCCTCAGCAGGCATTTGGAGT...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCGCCTCCAAGGCAGCTaGGACCTCTCCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRRLQGS*DLSWYR
Trigger: CCTGTACCAGGAGAGGTCTCAGCTGCCTTGGAGGCG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGTGGCTGCTGGCCTTGTaGACCACTGCCCAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: GGLSQALLAATGALSVFQWLLAL*TTAQVR
Trigger: ACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCCA...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGCTCTGCCTGCTGCCTaGCTCACTGCAGACGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRALPAA*LTADES
Trigger: GGACTCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCCAACAGTCATGGAGTaGGGTTGGAAGGGATCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVPTVME*GWKGSS
Trigger: GGAGGATCCCTTCCAACCTCACTCCATGACTGTTGG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGATGCTGGGCGGAGACTaGCACGTGACCGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGMLGGD*HVTGSH
Trigger: ATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCAT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCAGAAGAGGGTGCAAATaGCACAGCTGGCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSRRGCK*HSWPPT
Trigger: GGTTGGAGGCCAGCTGTGGCATTTGCACCCTCTTCT...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVLPSGL*MESPRE
Trigger: TTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCAGGTGCTGGGACCACTaGTGCCTCCCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCRCWDH*CLPPFS
Trigger: TGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCT...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCCCATGACAGCAGGATaGCTCAGGTGCTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKPMTAG*LRCWDH
Trigger: GTGGTCCCAGCACCTGAGGCATCCTGCTGTCATGGG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGGAGCCCAGGCTGGAGTaGAGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGEPRLE*SGVISA
Trigger: AGCCGAGATCACACCACTGCACTCCAGCCTGGGCTC...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGAACCACTGCCCAAGTaGGTAGCTGCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCEPLPK*VAAVWE
Trigger: CTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGTGGGGACACATGGGCTaGCAGGAGCATGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKWGHMG*QEHESP
Trigger: TGGGGACTCATGCTCCTGGCAGCCCATGTGTCCCCA...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVSLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCAGCTACGTGGGGCATaGTGGGTGGTGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCQLRGA*WVVQRK
Trigger: CTTCCTTTGCACCACCCACCATGCCCCACGTAGCTG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACACAGCCCTGCCCTGTaGGTAGTGGGATTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRHSPAL*VVGFPG
Trigger: TCCGGGGAATCCCACTACCCACAGGGCAGGGCTGTG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCACAGCCCTGCCCTGTaGGTAGTGGGATTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRHSPAL*VVGFPG
Trigger: TCCGGGGAATCCCACTACCCACAGGGCAGGGCTGTG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCCTCTCTGCTCTGCTaGGAGCCTTCCAACACTGCA +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLPSLLC*EPSNTA
Trigger: TGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGG...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTGCTGCAGCTGCTGCTaGTCTGGGGTGATGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCCCSCC*SGVMLW
Trigger: CCACAACATCACCCCAGACCAGCAGCAGCTGCAGCA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp ACCCAGGCCGGAGCGCAGTGGCTCGATCTTGGCTCGTaGCAACCTCTGTCTCCCGGGTTCAAGCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: TQAGAQWLDLGS*QPLSPGFKRFS
Trigger: GGAGAATCGCTTGAACCCGGGAGACAGAGGTTGCAACGAGCCAAGATCGAGCCACTGCGCTCCGGCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALATARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVTHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMTHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGTTGCAGTCCATCCCTaGACGATGAGAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMVAVHP*TMRSGL
Trigger: CAGACCACTTCTCATCGTTCAGGGATGGACTGCAAC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGTCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCT +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRSGSLW*GRTAHP
Trigger: AGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGA...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCTAGACCTATGGAGTTaGAGTTTCTCCAGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: CMSQQTALALRGPAGPRPLDLWS*SFSSSH
Trigger: GTGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTTCCTCCTGGGCACGATaGCAGAGGGAAGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALASSWAR*QREVSL
Trigger: TAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGA...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGCACACTCCTACAACTaGTGGCGTGACCGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVAHSYN*WRDREN
Trigger: GTTTTCACGGTCACGCCATCAGTTGTAGGAGTGTGC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCACCCAGTCCCGGTCTaGGGCCTCAGGCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDHPVPV*GLRQVP
Trigger: TGGGACTTGCCTGAGGCCTCAGACCGGGACTGGGTG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCAGACATGGCCTGAGTaGTTTCATTTACTACTGAGA +
Preference number: 4 (lower is better)
Translates to: TQRPSGATSASRYGQAPMQTWPE*FHLLLR
Trigger: TCTCAGTAGTAAATGAAATCACTCAGGCCATGTCTG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCTCCCGGGTTCAAGTaGTTCTCCTGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPPGFK*FSCLGL
Trigger: GAGACCGAGGCAGGAGAATCACTTGAACCCGGGAGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGACCTCCCGGGTTCAAGTaGTTCTCCTGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRPPGFK*FSCLGL
Trigger: GAGACCGAGGCAGGAGAATCACTTGAACCCGGGAGG...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGGCTGACCAGAGGCTGTaGACCAGGCAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGADQRL*TRQIHP
Trigger: TGGGTGGATTTGCCTGGTTCACAGCCTCTGGTCAGC...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCCCTGCCCACTGGGCTTaGGACTACTCGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSPAHWA*DYSDPE
Trigger: CTCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGG...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGGTTCCTCTCAGTCTGTaGCCCTCCCACATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKVPLSL*PSHILP
Trigger: GGGAAGGATGTGGGAGGGTCACAGACTGAGAGGAAC...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGCACTTTGGGAGGCTaGGGCCGGCGGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASSTLGG*GRREVR
Trigger: CCTGACCTCCCGCCGGCCTCAGCCTCCCAAAGTGCT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTACCCTCAGAAGGGTATaGGATATATATGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFTLRRV*DIYVLL
Trigger: AAGCAGCACATATATATCTCATACCCTTCTGAGGGT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDAPMLL*LMERDA
Trigger: GGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSTTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTLSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGGGGCTCCCTGGGCTTaGAGTGGGGAGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGGAPWA*SGEGQD
Trigger: ATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGGCACGGGGTGTGGTTaGAGAAGAACGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGGTGCG*RRTAVS
Trigger: GGAGACAGCCGTTCTTCTGCAACCACACCCCGTGCC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAATGCCCTGTGCCTCTGTaGGGACAGCCGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCECPVPL*GQPMLG
Trigger: GCCCAGCATCGGCTGTCCGCACAGAGGCACAGGGCA...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTGCCCTGTGCCTCTGTaGGGACAGCCGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFCPVPL*GQPMLG
Trigger: GCCCAGCATCGGCTGTCCGCACAGAGGCACAGGGCA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAAGGAGGCCTGCCCTGTaGCTCTGTGCGGACAGCCGA +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESRRPAL*LCADSR
Trigger: TCGGCTGTCCGCACAGAGGCACAGGGCAGGCCTCCT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCGCCCAGATAAGAAGCTaGCTGGGAAAGAAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSAQIRS*LGKKGR
Trigger: CCTCCCTTTCTTTCCCAGGCAGCTTCTTATCTGGGC...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTCCCCAGTGGCCTCTaGATGGAATCTCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCLPSGL*MESPRE
Trigger: TTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCATGTCCCCCAGCACTaGCCCCAGGTTCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWHVPQH*PQVPSP
Trigger: AGGGCTGGGAACCTGGGGGCAGTGCTGGGGGACATG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCAAAATCGGGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPKSGH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCCCGATTTTGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDISGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGG +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSDKALP*HQSTHW
Trigger: CCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTC...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPDKALP*HQSTHW
Trigger: CCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCGACACAGGGGGACAGTaGACAAGGCACTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSDTGGQ*TRHSRG
Trigger: GCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGTC...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGGCCACGCTGGGGAGTaGGGGAGTGCTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPGHAGE*GSACMW
Trigger: CCACATACAAGCACTCCCCCACTCCCCAGCGTGGCC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGCCTTCCAGGAGCTCTaGCAGGGAGGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTAFQEL*QGGSVA
Trigger: GGCCACAGACCCTCCCTGCCAGAGCTCCTGGAAGGC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGGATGCCTCAGGTGCTaGGACCACTGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTGCLRC*DHCCLP
Trigger: AGGGAGGCAGCAGTGGTCCCAGCACCTGAGGCATCC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAGCAAGCTCCGCCTCCTaGGTTCACACCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRASSAS*VHTIPL
Trigger: CAGGGGAATGGTGTGAACCCAGGAGGCGGAGCTTGC...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCCTTCATCCCCCTCCTaGAGGATGCTGCATTTCACA +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVPSSPS*RMLHFT
Trigger: TGTGAAATGCAGCATCCTCCAGGAGGGGGATGAAGG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGGCCCCAGGCCTCTGTaGCCTACCCTGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWGPRPL*PTLAPW
Trigger: CCAAGGGGCCAGGGTAGGCCACAGAGGCCTGGGGCC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCACAGACCATCCCTCCTaGGCCCCAGGCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGTDHPS*APGLCG
Trigger: GCCACAGAGGCCTGGGGCCCAGGAGGGATGGTCTGT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCCAAAGTTCAGCGGTTTaGGATGCAGCCACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVQSSAV*DAATEV
Trigger: CACCTCAGTGGCTGCATCCCAAACCGCTGAACTTTG...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCAGCTGCTGCTGGTCTaGGGTGATGTTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKQLLLV*GDVVAA
Trigger: AGCAGCCACAACATCACCCCAGACCAGCAGCAGCTG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCTGCCTCGGTCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPASVS*VAGITG
Trigger: GCCTGTAATCCCAGCTACCCAGGAGACCGAGGCAGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGCAAGCCCCGCCTCCTaGGTTCAAGAAATTCTACTG +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMASPAS*VQEILL
Trigger: CAGTAGAATTTCTTGAACCCAGGAGGCGGGGCTTGC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGTACAACCCAAGGTTGTaGCCCACCTTGCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWYNPRL*PTLPQI
Trigger: GATTTGGGGCAAGGTGGGCCACAACCTTGGGTTGTA...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGATCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGSCRHA*AAGGLS
Trigger: ACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGA...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWQAYFT*TWLRIL
Trigger: CAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFAETAT*PALILA
Trigger: AGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCCTCTGGACCAGCGGGTaGCAGGCTGATGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSLWTSG*QADASD
Trigger: GTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGAG...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGCACTTCATGTTTTCCTaGGGCACCCTGGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: GGLSQALLAATGALSVFQHFMFS*GTLETP
Trigger: TGGCGTCTCCAGGGTGCCTCAGGAAAACATGAAGTG...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGCACACTCCTACAACTaGTGGCGTGACCGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCAHSYN*WRDREN
Trigger: GTTTTCACGGTCACGCCATCAGTTGTAGGAGTGTGC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCACCCAGTCCCGGTCTaGGGCCTCAGGCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHHPVPV*GLRQVP
Trigger: TGGGACTTGCCTGAGGCCTCAGACCGGGACTGGGTG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGGGCGGGTGGATCACCTaGGGTCAGGAGTATGAGACC +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGGGWIT*GQEYET
Trigger: GGTCTCATACTCCTGACCTCAGGTGATCCACCCGCC...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTTCCTCAGAGCCCAGGTaGTACACACATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALASSEPR*YTHSWM
Trigger: CATCCAGGAATGTGTGTATCACCTGGGCTCTGAGGA...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCTGGTCTCGAACTCCTaGCCTCAGGTGACCCACCCG +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDILVSNS*PQVTHP
Trigger: CGGGTGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCCTGCCCACTGGGCTTaGGACTACTCGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFPAHWA*DYSDPE
Trigger: CTCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCGGTCTGCTTCCCACATaGAGTCCTCCCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGGLLPT*SPPRAL
Trigger: CAGGGCCCTGGGAGGACTTCATGTGGGAAGCAGACC...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCACATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAALSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCGGGGCTCCCTGGGCTTaGAGTGGGGAGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASGAPWA*SGEGQD
Trigger: ATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCC...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGGGCACGGGGTGTGGTTaGAGAAGAACGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGGTGCG*RRTAVS
Trigger: GGAGACAGCCGTTCTTCTGCAACCACACCCCGTGCC...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCGTGTTCACAACTTTTTaGGCAGGATCTGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVVFTTF*AGSGTQ
Trigger: CTGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACAC...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGTGTTCACAACTTTTTaGGCAGGATCTGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVVFTTF*AGSGTQ
Trigger: CTGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACAC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGTGCTAGGTGGGGAGTaGACAGGAGGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEVLGGE*TGGLPC
Trigger: ACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCAC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGGCTGGTGAGGACAGCTaGAGCAGAGTCCTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGAGEDS*SRVLSR
Trigger: TCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGC...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCCCAGCCCACAGCCCTaGCCTGTGGGTAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFPSPQP*PVGSGI
Trigger: AATCCCACTACCCACAGGGCAGGGCTGTGGGCTGGG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCCCCAGCCCACAGCCCTaGCCTGTGGGTAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFPSPQP*PVGSGI
Trigger: AATCCCACTACCCACAGGGCAGGGCTGTGGGCTGGG...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGACACCCTCTCTGCTCTaGTGGGAGCCTTCCAACACT +
Preference number: 4 (lower is better)
Translates to: GGLSQALLAATGALSVFQTPSLL*WEPSNT
Trigger: AGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGT...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGACCTTGAACTCCAAATaGCTGCTGAGGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWTLNSK*LLRLAT
Trigger: TGTGGCAAGCCTCAGCAGGCATTTGGAGTTCAAGGT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCACTTCTGGCCCCAGATaGCCCAGTGCCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTTSGPR*PSASLT
Trigger: GGTGAGGCTGGCACTGGGGCATCTGGGGCCAGAAGT...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCATCACTAACTCGGGGCTaGCGGCACTCGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPSLTRG*RHSCSP
Trigger: AGGGGAACACGAGTGCCGGCAGCCCCGAGTTAGTGA...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGTAACCAGCAGGGTGTaGCACAGGGCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGVTSRV*HRALVH
Trigger: GTGGACCAAAGCCCTGTGGCACACCCTGCTGGTTAC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCTGGGGACACATGGGCTaGCAGGAGCATGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTWGHMG*QEHESP
Trigger: TGGGGACTCATGCTCCTGGCAGCCCATGTGTCCCCA...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGTTGGGGTTTCTGAGCTaGAGAGACAACAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWLGFLS*RDNRGR
Trigger: TCTTCCCCTGTTGTCTCTGCAGCTCAGAAACCCCAA...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGCAGCTTTCCAGCGCCTaGATGCAGCCTTTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GGLSQALLAATGALSVFQQLSSA*MQPFVK
Trigger: CTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTG...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWDKALP*HQSTHW
Trigger: CCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGTGTATGTGGGATGCATaGAGGGAGGCTGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMCMWDA*REAAVC
Trigger: ACATACTGCAGCCTCCCTCCATGCATCCCACATACA...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGTGTATGTGGGATGCATaGAGGGAGGCTGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVCMWDA*REAAVC
Trigger: ACATACTGCAGCCTCCCTCCATGCATCCCACATACA...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACCAGCCCTGGGTACATaGCCACAAGAGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESPALGT*PQEEPW
Trigger: CCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCCAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTGCCTTCCAGGAGCTCTaGCAGGGAGGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSAFQEL*QGGSVA
Trigger: GGCCACAGACCCTCCCTGCCAGAGCTCCTGGAAGGC...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGCCTTCCAGGAGCTCTaGCAGGGAGGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPAFQEL*QGGSVA
Trigger: GGCCACAGACCCTCCCTGCCAGAGCTCCTGGAAGGC...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCAGGCCAGTGCTAGGTaGGGAGTGCACAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNQASAR*GVHRRP
Trigger: AGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCCAGGCCAGTGCTAGGTaGGGAGTGCACAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCQASAR*GVHRRP
Trigger: AGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTG...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTTTTCATTGTTATTCATaGGGAAACCCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLFHCYS*GNPVPG
Trigger: GCCTGGCACTGGGTTTCCCCATGAATAACAATGAAA...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGGATGCCTCAGGTGCTaGGACCACTGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTGCLRC*DHCCLP
Trigger: AGGGAGGCAGCAGTGGTCCCAGCACCTGAGGCATCC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCAGCCTCCGGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGSLRSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCACACACACCAGCAGTaGTCAGGCAGCAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKHTHQQ*SGSNRY
Trigger: GTACCTGTTGCTGCCTGACCACTGCTGGTGTGTGTG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCCTACCCTGGCCCCTTaGCAGTTGATGGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGPTLAP*QLMATL
Trigger: CAGAGTGGCCATCAACTGCCAAGGGGCCAGGGTAGG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCCGCGGCCTGCAACCCTaGGTTCCATGCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSRGLQP*VPCKGS
Trigger: ACTGCCTTTGCATGGAACCCAGGGTTGCAGGCCGCG...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACCACCCCCATCAGCCTaGCAGCTTTGTGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPPPPSA*QLCAHS
Trigger: ACTGTGGGCACAAAGCTGCCAGGCTGATGGGGGTGG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAACATCTCTGGCCCCATaGAGCCCACATCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGTSLAP*SPHPQP
Trigger: TGGTTGGGGATGTGGGCTCCATGGGGCCAGAGATGT...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGGCTCTTGTTTTCAGCTaGACAGTCCTTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWALVFS*TVLPGS
Trigger: TGACCCTGGAAGGACTGTCCAGCTGAAAACAAGAGC...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACCCTCCCAGGTCCCCTaGTACCCACTAGAGACCACA +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPPSQVP*YPLETT
Trigger: TGTGGTCTCTAGTGGGTACCAGGGGACCTGGGAGGG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACTCCAGGACCCCAGATaGCAAACTGGCTCACACCGT +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRLQDPR*QTGSHR
Trigger: ACGGTGTGAGCCAGTTTGCCATCTGGGGTCCTGGAG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCGAGGATCTCCTGATCTaGGCAGGATCCTTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCEDLLI*AGSLLG
Trigger: ACCTAGCAAGGATCCTGCCCAGATCAGGAGATCCTC...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGAGCCAGCCTTGCCAGTaGGAGCCAAGCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGSQPCQ*EPSRAE
Trigger: TTCTGCCCTGCTTGGCTCCCACTGGCAAGGCTGGCT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp AAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAGGGAGGCTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: KTVRPRWGVGEC*YVGCMEGGCSM
Trigger: CATACTGCAGCCTCCCTCCATGCATCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
3UTR CAA 72 bp ACGGGAAGGACCACTACCTCTCAGAGATGGAAAGGCTaGCCATGGTCCACGCAGCACAAAGCCCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: TGRTTTSQRWKG*PWSTQHKAHPQ
Trigger: CTGGGGGTGGGCTTTGTGCTGCGTGGACCATGGCAAGCCTTTCCATCTCTGAGAGGTAGTGGTCCTTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGAGGTCACGTCACGCTaGTGCTTAAGATGGGGCACT +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCREVTSR*CLRWGT
Trigger: AGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLRAGSQ*RTMPTA
Trigger: CGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCT...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACAATGCCTGGAGCTTCTaGGCAGCTGCAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNNAWSF*AAAAWG
Trigger: ACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCATT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCT +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFSGSLW*GRTAHP
Trigger: AGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGCTCCAGGAAGAAGATaGGCACGATGGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGAPGRR*ARWCHR
Trigger: TCTGTGGCACCATCGTGCTCATCTTCTTCCTGGAGC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAGCTCCAGGAAGAAGATaGGCACGATGGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRAPGRR*ARWCHR
Trigger: TCTGTGGCACCATCGTGCTCATCTTCTTCCTGGAGC...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGGCACACAAGGGCAACTaGAAGTGCTGCCATACAGAA +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLAHKGN*KCCHTE
Trigger: TTCTGTATGGCAGCACTTTCAGTTGCCCTTGTGTGC...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTGCACACAAGGGCAACTaGAAGTGCTGCCATACAGAA +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALAAHKGN*KCCHTE
Trigger: TTCTGTATGGCAGCACTTTCAGTTGCCCTTGTGTGC...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCCTCTGGACCAGCGGGTaGCAGGCTGATGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTLWTSG*QADASD
Trigger: GTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGAG...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGGATCAACCCAAACCTaGAACTCACCCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGGSTQT*NSPHLG
Trigger: CCCAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCGCCTCCAAGGCAGCTaGGACCTCTCCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQRLQGS*DLSWYR
Trigger: CCTGTACCAGGAGAGGTCTCAGCTGCCTTGGAGGCG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGACCACCCCAGTGGCTTaGGTGTTTCTCCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKTTPVA*VFLRFF
Trigger: AAAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGT...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGAGTCCATATGACCAATaGTGGCCAGACAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGSPYDQ*WPDSPV
Trigger: GACAGGGCTGTCTGGCCATCATTGGTCATATGGACT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRAPMLL*LMERDA
Trigger: GGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGACTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGLSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRVFRAI*ATALVS
Trigger: GCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAAGGAGGCCTGCCCTGTaGCTCTGTGCGGACAGCCGA +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAERRPAL*LCADSR
Trigger: TCGGCTGTCCGCACAGAGGCACAGGGCAGGCCTCCT...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAGCTGGTGAGGACAGCTaGAGCAGAGTCCTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRAGEDS*SRVLSR
Trigger: TCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGC...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCCCCCTCCTGGAGGATaGTGCATTTCACAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGPPPGG*CISQPH
Trigger: ATGCGGCTGTGAAATGCAGCATCCTCCAGGAGGGGG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCATCACCCAGGCTGGAGTaGAGTGGCGTGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPSPRLE*SGVIST
Trigger: AGTCGAGATCACGCCACTGCACTCCAGCCTGGGTGA...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCAGTTGCCACCAGTGTaGCCTAACCACCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGQLPPV*PNHPSG
Trigger: GCCACTGGGGTGGTTAGGGCACACTGGTGGCAACTG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACAGTTGCCACCAGTGTaGCCTAACCACCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESQLPPV*PNHPSG
Trigger: GCCACTGGGGTGGTTAGGGCACACTGGTGGCAACTG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCATCACTAACTCGGGGCTaGCGGCACTCGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSSLTRG*RHSCSP
Trigger: AGGGGAACACGAGTGCCGGCAGCCCCGAGTTAGTGA...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTTTGGGGTTTCTGAGCTaGAGAGACAACAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALALGFLS*RDNRGR
Trigger: TCTTCCCCTGTTGTCTCTGCAGCTCAGAAACCCCAA...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACAGCTTTCCAGCGCCTaGATGCAGCCTTTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGQLSSA*MQPFVK
Trigger: CTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCACCCTGTCCACGCCTGTaGGTCCCTCTACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAPCPRL*VPLPTA
Trigger: GGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGACACAGGGGGACAGTaGACAAGGCACTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGDTGGQ*TRHSRG
Trigger: GCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGTC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGGCCACGCTGGGGAGTaGGGGAGTGCTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAGHAGE*GSACMW
Trigger: CCACATACAAGCACTCCCCCACTCCCCAGCGTGGCC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTACAGTGAGGCCACGCTaGGGAGTGGGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSTVRPR*GVGECL
Trigger: CAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGT...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACACAGTGAGGCCACGCTaGGGAGTGGGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHTVRPR*GVGECL
Trigger: CAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGT...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGACTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTCAGGCCAGCCAGCCCTaGGTACATGGCCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSQASQP*VHGHKR
Trigger: CCTCTTGTGGCCATGTACCCAGGGCTGGCTGGCCTG...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGCTGATTCAGCTGATCTaGATGGAGACCCCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWLIQLI*METPQD
Trigger: ATCTTGAGGGGTCTCCATCCAGATCAGCTGAATCAG...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372158.6
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCAGGCATCTAGTGAGGTaGGCACTGCCACCAACCCCC +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFRHLVR*ALPPTP
Trigger: GGGGGTTGGTGGCAGTGCCCACCTCACTAGATGCCT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGATCCTGAGAGGGGGTaGACCAGGGTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPDPERG*TRVEEG
Trigger: CCCCTCCTCAACCCTGGTCCACCCCCTCTCAGGATC...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACTACGTGGGGCATGGTaGGTGGTGCAAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESLRGAW*VVQRKG
Trigger: CCCCTTCCTTTGCACCACCCACCATGCCCCACGTAG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCACAGCCCTGCCCTGTaGGTAGTGGGATTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAHSPAL*VVGFPG
Trigger: TCCGGGGAATCCCACTACCCACAGGGCAGGGCTGTG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGCCTCCGGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGSLRSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGCAAGCTCCGCCTCCTaGGTTCACACCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFASSAS*VHTIPL
Trigger: CAGGGGAATGGTGTGAACCCAGGAGGCGGAGCTTGC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCCACTCTGCTGCTTCTaGGGGCTCCCGGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWPLCCF*GLPGNF
Trigger: AAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGTGG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAATGAGTGGGACCAGATaGGGTCCACCAACCGTCCAA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRMSGTR*GPPTVQ
Trigger: TTGGACGGTTGGTGGACCCCATCTGGTCCCACTCAT...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGCCTCCCAGAGTGGCTaGCCCTTACCTAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQASQSG*PLPRAP
Trigger: AGGTGCCCTAGGTAAGGGCCAGCCACTCTGGGAGGC...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCATTTTGCTGAGGAAATaGTACCCAGTTCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: AAGGLSQALLAATGALSVILLRK*YPVPGR
Trigger: ACGGCCAGGAACTGGGTACCATTTCCTCAGCAAAAT...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTTGCATCATTTCAGGTaGCTTGTGAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSLHHFR*LVSSGQ
Trigger: CTGGCCAGAACTCACAAGCCACCTGAAATGATGCAA...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGTTGCATCATTTCAGGTaGCTTGTGAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AEERLSPGRGKWQASQPWLHHFR*LVSSGQ
Trigger: CTGGCCAGAACTCACAAGCCACCTGAAATGATGCAA...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAACTGGCTCACACCGTaGACAACCTCCCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTNWLTP*TTSHKA
Trigger: GGCCTTGTGGGAGGTTGTCCACGGTGTGAGCCAGTT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGAAGAAGAGGGGGAGGTaGCCATACAACCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGKKRGR*PYNPRL
Trigger: CAACCTTGGGTTGTATGGCCACCTCCCCCTCTTCTT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCAAGCAGCTCTGGCACTaGTGTGGAGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFKQLWH*CGEGTG
Trigger: CCCAGTGCCCTCTCCACACCAGTGCCAGAGCTGCTT...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCAAGCAGCTCTGGCACTaGTGTGGAGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFKQLWH*CGEGTG
Trigger: CCCAGTGCCCTCTCCACACCAGTGCCAGAGCTGCTT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGTARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCCACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGAGCTGCAGGGGGTCTaGGTCAAGCCCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKELQGV*VKPSWQ
Trigger: CTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGCTC...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWRAGSQ*RTMPTA
Trigger: CGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCT...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTAATGCCTGGAGCTTCTaGGCAGCTGCAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPNAWSF*AAAAWG
Trigger: ACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCATT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGTTGCAGTCCATCCCTaGACGATGAGAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGVAVHP*TMRSGL
Trigger: CAGACCACTTCTCATCGTTCAGGGATGGACTGCAAC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGCGGCGAACCCCAGGGTaGACATCACCACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKRRTPG*TSPRPP
Trigger: TGGTGGGCGTGGTGATGTTCACCCTGGGGTTCGCCG...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCCACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGCTCCAGGAAGAAGATaGGCACGATGGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTAPGRR*ARWCHR
Trigger: TCTGTGGCACCATCGTGCTCATCTTCTTCCTGGAGC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGTGGTGCTACAGAGGCTaGAGAAGGCCAGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRWCYRG*RRPELT
Trigger: TGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCA...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCACTTCATGTTTTCCTaGGGCACCCTGGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGHFMFS*GTLETP
Trigger: TGGCGTCTCCAGGGTGCCTCAGGAAAACATGAAGTG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAATCCCTCCACCATAGATaGAGGGGAGGCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCESLHHR*RGGCGR
Trigger: CCTTCCACAGCCTCCCCTTCATCTATGGTGGAGGGA...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCTGGCCCCTTGGCAGTTaGTGGCCACTCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASWPLGS*WPLCCF
Trigger: GAAGCAGCAGAGTGGCCATCAACTGCCAAGGGGCCA...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTTGGGATGCAGCCACTaGGGTGTCTGCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFLGCSH*GVCRSG
Trigger: TCCACTCCTGCAGACACCTCAGTGGCTGCATCCCAA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGATAGTACCCTCAGCTaGGATGGGAATAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPDSTLS*DGNRGQ
Trigger: CTGCCCCCTATTCCCATCTCAGCTGAGGGTACTATC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGACCCGACATTCTGTTaGCTTAGAAGAGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDDPTFC*LRRADV
Trigger: GACATCAGCTCTTCTAAGTCAACAGAATGTCGGGTC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGAGCAGAAAGAAGGCTaGCCAGAGGCTGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTEQKEG*PEAVNQ
Trigger: CTGGTTCACAGCCTCTGGTCAGCCTTCTTTCTGCTC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGAAAAGGAGGATCTCCTaGTCTGGGCAGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRKRRIS*SGQDPC
Trigger: GCAAGGATCCTGCCCAGATCAGGAGATCCTCCTTTT...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGAAGGTGACAGGAACTaGGCCAGCCTTGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPEGDRN*ASLASG
Trigger: CCCACTGGCAAGGCTGGCTCAGTTCCTGTCACCTTC...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCC +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLSGSLW*GRTAHP
Trigger: GGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGA...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372164.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGRLPQL*SSEVMA
Trigger: GGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPALDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPAPMLL*LMERDA
Trigger: GGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRTTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGGCACGGGGTGTGGTTaGAGAAGAACGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGGTGCG*RRTAVS
Trigger: GGAGACAGCCGTTCTTCTGCAACCACACCCCGTGCC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGAGCTTCTGAGCAGCTaGAGCCTGGGGTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFELLSS*SLGLWL
Trigger: TAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCGAGCTTCTGAGCAGCTaGAGCCTGGGGTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAELLSS*SLGLWL
Trigger: TAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTC...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAACCCTTTTCGCTCCATaGCCACAGCCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESTLFAP*PQPDSK
Trigger: CTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGACCCTTTTCGCTCCATaGCCACAGCCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWTLFAP*PQPDSK
Trigger: CTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGT...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAACTCACAGGGCTCCCTaGTTTCGACTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESTHRAP*FRLHPK
Trigger: CTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372158.6
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACA +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGPQANL*GCGRHT
Trigger: TGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAATGTGCGGACAGCCGATaGTGGGCGGAGACTGCCACG +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKCADSR*WAETAT
Trigger: CGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACA...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGTGCTAGGTGGGGAGTaGACAGGAGGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGVLGGE*TGGLPC
Trigger: ACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCAC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCCCACCTACAGTCACATaGATGCCTGCCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTPPTVT*MPATSP
Trigger: TGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGG...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCCACCTACAGTCACATaGATGCCTGCCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGPPTVT*MPATSP
Trigger: TGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCAGCAGGATGCCTCAGGTaGTGGGACCACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAAGCLR*WDHCCL
Trigger: GAGGCAGCAGTGGTCCCAGCACCTGAGGCATCCTGC...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTGCAGGTAGTCACCTaGAGCATCCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLQVVT*SILLGT
Trigger: CGTGCCCAGGAGGATGCTGCAGGTGACTACCTGCAG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGACTGCAGGTAGTCACCTaGAGCATCCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGLQVVT*SILLGT
Trigger: CGTGCCCAGGAGGATGCTGCAGGTGACTACCTGCAG...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGAATTGGCCAAGCCTTaGCAACTTGATAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVELAKP*QLDKEQ
Trigger: TTGCTCCTTATCAAGTTGGCAAGGCTTGGCCAATTC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCTCTACACACGCGGCCTaGAACCCTGGGTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTSTHAA*NPGFHA
Trigger: TGCATGGAACCCAGGGTTGCAGGCCGCGTGTGTAGA...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCTCTACACACGCGGCCTaGAACCCTGGGTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFSTHAA*NPGFHA
Trigger: TGCATGGAACCCAGGGTTGCAGGCCGCGTGTGTAGA...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAAGGGCACCTGGTGGATaGTCTAACCCTCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRRAPGG*SNPQDS
Trigger: TGAATCCTGAGGGTTAGAGCATCCACCAGGTGCCCT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGCCTGCCTACATCGTTaGTCATTGATCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRACLHR*SLIMAC
Trigger: GCAGGCCATGATCAATGAGCAACGATGTAGGCAGGC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGCTGCCTTCCTGCTGTaGCTCGTCAGTGCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAAAFLL*LVSACL
Trigger: TAGGCAGGCACTGACGAGGCACAGCAGGAAGGCAGC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCAGGGGAGCCCTGTaGCCCCAATCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQARGAL*PQSLFP
Trigger: AGGGAACAGAGATTGGGGGCACAGGGCTCCCCTGGC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGCCAGCTCTGCCTGCTaGCTGACTCACTGCAGACGA +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPASSAC*LTHCRR
Trigger: TCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGC...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGCCCTAAGAGAGAGCTaGTGGCGTGCAGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEALRES*WRAERS
Trigger: GCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTAGCAGAGCCCAGGCTTaGAGCCAACCGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLSRAQA*SQPDLC
Trigger: ACACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCT...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTCGTTCCACCCCCACTaGTTTCTAAGGAGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSSFHPH*FLRSVN
Trigger: ATTTACACTCCTTAGAAAGCAGTGGGGGTGGAACGA...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGGCCAACAGTTTCACTaGAGCCTCATGAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRGQQFH*SLMRDP
Trigger: TGGGTCTCTCATGAGGCTGCAGTGAAACTGTTGGCC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCCCCAGAGAGGGACCTaGAGGCAAACCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAPQRGT*RQTRPS
Trigger: GGAAGGTCTGGTTTGCCTGCAGGTCCCTCTCTGGGG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCTCTGGCCTCCCAGCGTaGCTCAGCTCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGSGLPA*LSSAPS
Trigger: TGAGGGAGCCGAGCTGAGCCACGCTGGGAGGCCAGA...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCATGTCTGGATGCCAGTaGAGAGGGGACCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGMSGCQ*RGDQGV
Trigger: GACACCCTGGTCCCCTCTCCACTGGCATCCAGACAT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACACCAGTCCACGCACTaGCTCAGGCTTACTTCACTT +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRHQSTH*LRLTSL
Trigger: AAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGACACAGGGGGACAGTaGACAAGGCACTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSDTGGQ*TRHSRG
Trigger: GCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGTC...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKEAVVG*FLRHSR
Trigger: CCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTC...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCGGCCACGCTGGGGAGTaGGGGAGTGCTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLGHAGE*GSACMW
Trigger: CCACATACAAGCACTCCCCCACTCCCCAGCGTGGCC...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCTGGCCATCTTGGGCTaGGGCTCCCTGGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCLAILG*GSLGLQ
Trigger: CTGCAAGCCCAGGGAGCCCCAGCCCAAGATGGCCAG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWPTVSG*PSWAGA
Trigger: AGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCTTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAACTTGTGCGGCTGTaGCCGGCACACAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAQLVRL*PAHKGN
Trigger: GTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCAACTTGTGCGGCTGTaGCCGGCACACAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGQLVRL*PAHKGN
Trigger: GTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCGTGGGGCATGGTGGGTaGTGCAAAGGAAGGGGTACA +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAVGHGG*CKGRGT
Trigger: TGTACCCCTTCCTTTGCACCACCCACCATGCCCCAC...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCAGCTTTCAGCTACGTaGGGCATGGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDQLSAT*GMVGGA
Trigger: TGCACCACCCACCATGCCCCACGTAGCTGAAAGCTG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGAGAACTGGCGAGCCTaGGCCTCTGAAGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFENWRA*ASEAEK
Trigger: CTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGAGAGGTCAGAGAACTaGCGAGCCTGGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEERSEN*RAWASE
Trigger: TTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCTGCCACCTCCCCAGTaGCCTCTGCATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAALPPPQ*PLHGIS
Trigger: GGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAAAAACCGTGGTTCTGTaGACCGACACCCGTAAGACC +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRKTVVL*TDTRKT
Trigger: GGTCTTACGGGTGTCGGTCCACAGAACCACGGTTTT...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGGGCTCTAAAGGTGTATaGCTCCCCAGATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGGSKGV*LPRFLE
Trigger: CTCCAGAAATCTGGGGAGCCATACACCTTTAGAGCC...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGAAACTCACCCCACCTTaGGACTTTCCAGTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMKLTPP*DFPVSR
Trigger: TCTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTT...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCATGAAGGGGAGGCTGTaGAAGGCAGAGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCMKGRL*KAEKWK
Trigger: TTTCCATTTCTCTGCCTTCCACAGCCTCCCCTTCAT...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGACCTTCATCCCCCTCCTaGAGGATGCTGCATTTCACA +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRPSSPS*RMLHFT
Trigger: TGTGAAATGCAGCATCCTCCAGGAGGGGGATGAAGG...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCAACTTTGGTTGTGTTaGTTTCTGGTAGCATCTGCG +
Preference number: 4 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVQLWLC*FLVASA
Trigger: CGCAGATGCTACCAGAAACCAACACAACCAAAGTTG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCGCGGCCTGCAACCCTaGGTTCCATGCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQRGLQP*VPCKGS
Trigger: ACTGCCTTTGCATGGAACCCAGGGTTGCAGGCCGCG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCCACCCCCATCAGCCTaGCAGCTTTGTGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLPPPSA*QLCAHS
Trigger: ACTGTGGGCACAAAGCTGCCAGGCTGATGGGGGTGG...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTGCTGCAGCTGCTGCTaGTCTGGGGTGATGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFCCSCC*SGVMLW
Trigger: CCACAACATCACCCCAGACCAGCAGCAGCTGCAGCA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCACTTCCCTAAACCATaGGGCCTGGGGCACAGACCA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGHFPKP*GLGHRP
Trigger: TGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACACATCTCTGGCCCCATaGAGCCCACATCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNTSLAP*SPHPQP
Trigger: TGGTTGGGGATGTGGGCTCCATGGGGCCAGAGATGT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCTGGGGTTCCTAAGCTaGAAGCGGGCTTTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTLGFLS*KRALRH
Trigger: ATGCCTCAAAGCCCGCTTCCAGCTTAGGAACCCCAG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp GCTGCTTCTGGGGGCTCCCGGGCAACTTTGGTTGTGTaGGTTTCTGGTAGCATCTGCGCTCCAGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AASGGSRATLVV*VSGSICAPGKK
Trigger: CTTCTTGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp ACTCTGCTGCTTCTGGGGGCTCCCGGGCAACTTTGGTaGTGTTGGTTTCTGGTAGCATCTGCGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLLLLGAPGQLW*CWFLVASALQA
Trigger: TGCCTGGAGCGCAGATGCTACCAGAAACCAACACAACCAAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTaGCATACCTCCAAGGACAGGGTGCTCAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PYHPRQEGCSLG*HTSKDRVLSPS
Trigger: GGAGGGACTGAGCACCCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGATCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGTCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQSCRHA*AAGGLS
Trigger: ACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGA...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACCATGCTGCTTTGCTTaGTGGAGAGAGATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPPCCFA*WREMPC
Trigger: ACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAAGAGCCGGCTCTCAGTaGAGAACCATGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWARAGSQ*RTMPTA
Trigger: CGCGGTGGGCATGGTTCTTCACTGAGAGCCGGCTCT...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCAATGCCTGGAGCTTCTaGGCAGCTGCAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLNAWSF*AAAAWG
Trigger: ACCCCAGGCTGCAGCTGCTCAGAAGCTCCAGGCATT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCGGAGACCTTCCCATaGCAGCAGGATGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQAETFP*QQDASG
Trigger: ACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCGGAAAGGCCCACCTGTaGAGGTCATTCAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGGKAHL*RSFSTP
Trigger: TGGAGTGCTGAATGACCTTCACAGGTGGGCCTTTCC...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGGATCAACCCAAACCTaGAACTCACCCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGGSTQT*NSPHLG
Trigger: CCCAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTCCCTCCACCATAGATaGAGGGGAGGCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSSLHHR*RGGCGR
Trigger: CCTTCCACAGCCTCCCCTTCATCTATGGTGGAGGGA...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCCAGTGGGATAAAGCATaGGGAGGGGTGTGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLQWDKA*GGVCPG
Trigger: CCCCGGACACACCCCTCCTCATGCTTTATCCCACTG...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAGAGCTATCTGACATGTaGCCCAGGCAGCTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSELSDM*PRQLSR
Trigger: ACGAGAGAGCTGCCTGGGTCACATGTCAGATAGCTC...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATGGCCCCTTGGCAGTTaGTGGCCACTCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSWPLGS*WPLCCF
Trigger: GAAGCAGCAGAGTGGCCATCAACTGCCAAGGGGCCA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCCTCTGTTCTCCTTATaGGTGGGACCAGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNPLFSL*VGPDGV
Trigger: GACCCCATCTGGTCCCACTCATAAGGAGAACAGAGG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGTCAGGAGAATCACTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFVRRIT*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGAC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCGTAGCAGACATGGCCTaGGTGATTTCATTTACTACT +
Preference number: 4 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSVADMA*VISFTT
Trigger: AGTAGTAAATGAAATCACTCAGGCCATGTCTGCTAC...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAATGGCTGCTGGCCTTGTaGACCACTGCCCAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEWLLAL*TTAQVR
Trigger: ACGCACTTGGGCAGTGGTTCACAAGGCCAGCAGCCA...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAACTCCTGACCTCAGGTaGCCCACCCGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKTPDLR*PTRLGF
Trigger: GAAGCCAAGGCGGGTGGGTCACCTGAGGTCAGGAGT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGAGCAGAAAGAAGGCTaGCCAGAGGCTGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFEQKEG*PEAVNQ
Trigger: CTGGTTCACAGCCTCTGGTCAGCCTTCTTTCTGCTC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCATCCCCAACCAGTGTaGCAAGGAGCCCACCATCTC +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASHPQPV*QGAHHL
Trigger: GAGATGGTGGGCTCCTTGTCACACTGGTTGGGGATG...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCCATCCGATTTCCCCTaGCACAAGGTCACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIPSDFP*HKVTQH
Trigger: GTGCTGAGTGACCTTGTGTCAGGGGAAATCGGATGG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCATCCGATTTCCCCTaGCACAAGGTCACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGPSDFP*HKVTQH
Trigger: GTGCTGAGTGACCTTGTGTCAGGGGAAATCGGATGG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGTTCACTGCAGCCTCATaGGAGACCCAGAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWFTAAS*ETQSHS
Trigger: ACTGTGGCTCTGGGTCTCTCATGAGGCTGCAGTGAA...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQLDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATG +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGWGVGE*LYVGCM
Trigger: CATGCATCCCACATACAAGCACTCCCCCACTCCCCA...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGGGGCTCCCTGGGCTTaGAGTGGGGAGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWGAPWA*SGEGQD
Trigger: ATCCTGACCCTCCCCACTGCAAGCCCAGGGAGCCCC...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGGCACGGGGTGTGGTTaGAGAAGAACGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPGTGCG*RRTAVS
Trigger: GGAGACAGCCGTTCTTCTGCAACCACACCCCGTGCC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGTCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGTCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRVFRAI*ATALVK
Trigger: TTTAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341863.10
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGTGTTCACAACTTTTTaGGCAGGATCTGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRVFTTF*AGSGTQ
Trigger: CTGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACAC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCTCATGCAGCAGCAGTaGCCAGGCTTCAATCCCATG +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNLMQQQ*PGFNPM
Trigger: CATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCATGCTGGGCGGAGACTaGCACGTGACCGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLMLGGD*HVTGSH
Trigger: ATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCAT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGTGCTAGGTGGGGAGTaGACAGGAGGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPVLGGE*TGGLPC
Trigger: ACAGGGCAGGCCTCCTGTGCACTCCCCACCTAGCAC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTACAGTCACATGCATaGCTGCCACCTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLQSHA*LPPPQW
Trigger: CCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTGCTGGGACCACTaGTGCCTCCCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGRCWDH*CLPPFS
Trigger: TGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCACCT...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGCCCCAAGTTCTACAATaGCCACTTCATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLPQVLQ*PLHVFL
Trigger: CAGGAAAACATGAAGTGGGCATTGTAGAACTTGGGG...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCCTCCTGGAGGATGCTaGATTTCACAGCCGCATGGT +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWPPGGC*ISQPHG
Trigger: ACCATGCGGCTGTGAAATGCAGCATCCTCCAGGAGG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGCAATGAGCCAAGATTaGACCACTGCGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFAMSQD*TTALQP
Trigger: AGGCTGGAGCGCAGTGGTGCAATCTTGGCTCATTGC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTCATTGATCATGGCCTaGGAGTTAGTGTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCSLIMA*ELVSSE
Trigger: CTCTGATGACACTAACTCGCAGGCCATGATCAATGA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCGCCTGCCTACATCGTTaGTCATTGATCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTACLHR*SLIMAC
Trigger: GCAGGCCATGATCAATGAGCAACGATGTAGGCAGGC...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGCTGTGCCTCGTCAGTaGCTGCCTACATCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHAVPRQ*LPTSLL
Trigger: GAGCAACGATGTAGGCAGGCACTGACGAGGCACAGC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGCTGTGCCTCGTCAGTaGCTGCCTACATCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGAVPRQ*LPTSLL
Trigger: GAGCAACGATGTAGGCAGGCACTGACGAGGCACAGC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCACTGAGCTGCCTTCCTaGTGTGCCTCGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASTELPS*CASSVP
Trigger: AGGCACTGACGAGGCACAGCAGGAAGGCAGCTCAGT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGATCATGGGCACTGAGCTaGCTTCCTGCTGTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGSWALS*LPAVPR
Trigger: ACGAGGCACAGCAGGAAGGCAGCTCAGTGCCCATGA...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGAACCACTGCCCAAGTaGGTAGCTGCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLEPLPK*VAAVWE
Trigger: CTCCCACACTGCAGCTACGCACTTGGGCAGTGGTTC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGCCAGCTCTGCCTGCTaGCTGACTCACTGCAGACGA +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWASSAC*LTHCRR
Trigger: TCGTCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGCACTCGTGTTCCCCTaGAGAGGAAAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGALVFP*RGKVCV
Trigger: CACGCAGACCTTTCCTCTGCAGGGGAACACGAGTGC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAACAGCTTTCCAGCGCCTaGATGCAGCCTTTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEQLSSA*MQPFVK
Trigger: CTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTG...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGACAAGGCACTCCCGTaGCACCAGTCCACGCACTGG +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPDKALP*HQSTHW
Trigger: CCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCTCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDISLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCATCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESSLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCCAGCCCTGGGTACATaGCCACAAGAGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGPALGT*PQEEPW
Trigger: CCAGGGCTCCTCTTGTGGCCATGTACCCAGGGCTGG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGCTAGGCACGGGGTGTaGTTGCAGAAGAACGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGARHGV*LQKNGC
Trigger: ACAGCCGTTCTTCTGCAACCACACCCCGTGCCTAGC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCATCCCTTGGTTCCTCTaGCAGCCGCGTTTACCACTG +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTIPWFL*QPRLPL
Trigger: CAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGAT...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCTYPIP*FLWQPR
Trigger: ACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGT...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGTCTACAGGAATAGATaGGTCAGGCCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEVYRNR*VRPAGA
Trigger: GGCTCCTGCAGGCCTGACCCATCTATTCCTGTAGAC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGTCTACAGGAATAGATaGGTCAGGCCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGVYRNR*VRPAGA
Trigger: GGCTCCTGCAGGCCTGACCCATCTATTCCTGTAGAC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCTGTGGACCATGCAGATaGTTTTTCAGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTCGPCR*FFSPAH
Trigger: GTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACA...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCAAAACCGTGGTTCTGTaGACCGACACCCGTAAGACC +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSKTVVL*TDTRKT
Trigger: GGTCTTACGGGTGTCGGTCCACAGAACCACGGTTTT...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAAAACCGTGGTTCTGTaGACCGACACCCGTAAGACC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTKTVVL*TDTRKT
Trigger: GGTCTTACGGGTGTCGGTCCACAGAACCACGGTTTT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGACAGACCATCCCTCCTaGGCCCCAGGCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWTDHPS*APGLCG
Trigger: GCCACAGAGGCCTGGGGCCCAGGAGGGATGGTCTGT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTATGGTACCCAGTTCCTaGCCGTCATGGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGMVPSS*PSWALS
Trigger: GCTCAGTGCCCATGACGGCCAGGAACTGGGTACCAT...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGGTCTCCTGGGTAGCTaGGATTACAGGCGCCCACAA +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGGLLGS*DYRRPQ
Trigger: TTGTGGGCGCCTGTAATCCCAGCTACCCAGGAGACC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCAGGCTGGAGTGCAGTaGCGTGATCTCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWQAGVQ*RDLDLL
Trigger: CAGTAAGTCGAGATCACGCCACTGCACTCCAGCCTG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTCTAAACCATGGGGCCTaGGGCACAGACCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPLNHGA*GTDHCC
Trigger: ACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAG...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGATGATGCTTTCCTCCTaGAACTCACACCCTTGCATA +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLMMLSS*NSHPCI
Trigger: TATGCAAGGGTGTGAGTTCCAGGAGGAAAGCATCAT...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACAGCAGGTGAGAGTCTaGAGTAGTTTCTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGQQVRV*SSFCLV
Trigger: GACAAGGCAGAAACTACTCCAGACTCTCACCTGCTG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCAGCAGGTGAGAGTCTaGAGTAGTTTCTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRQQVRV*SSFCLV
Trigger: GACAAGGCAGAAACTACTCCAGACTCTCACCTGCTG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCAGCCAGCCTTGCCAGTaGGAGCCAAGCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLSQPCQ*EPSRAE
Trigger: TTCTGCCCTGCTTGGCTCCCACTGGCAAGGCTGGCT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAAGGGGAAACAGCCAGTaGACTCTGGCCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESRGNSQ*TLAKVQ
Trigger: CTGGACTTTGGCCAGAGTCCACTGGCTGTTTCCCCT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp GAGGACCTCTCACTGATGCACTTGAGTGGCAGAGACTaGGGACTAAAGGAGGACTTCTGGCCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: EDLSLMHLSGRD*GLKEDFWPQMP
Trigger: GGGCATCTGGGGCCAGAAGTCCTCCTTTAGTCCCAAGTCTCTGCCACTCAAGTGCATCAGTGAGAGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGTARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAACACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCATCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCACCCACAGATGTGGATaGCCCAAAGCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFTHRCG*PKADVW
Trigger: CCAGACATCTGCTTTGGGTCATCCACATCTGTGGGT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAACCATGCTGCTTTGCTTaGTGGAGAGAGATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEPCCFA*WREMPC
Trigger: ACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGG...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCAGGCTTACTTCACTTaGACATGGCTGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTQAYFT*TWLRIL
Trigger: CAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGGAGAGGAAGAGGAAGTaGAATGGTGTGAGAACATTC +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKERKRK*NGVRTF
Trigger: GAATGTTCTCACACCATTTCACTTCCTCTTCCTCTC...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGTTGCAGTCCATCCCTaGACGATGAGAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWVAVHP*TMRSGL
Trigger: CAGACCACTTCTCATCGTTCAGGGATGGACTGCAAC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACGTCCCGGTAGGACTTaGTGTTGCTCTCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESRPGRT*CCSRRT
Trigger: AGTTCTTCGAGAGCAACATCAAGTCCTACCGGGACG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCACTCTGGACCAGCGGGTaGCAGGCTGATGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWALWTSG*QADASD
Trigger: GTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGAG...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTCCTCCTGGGCACGATaGCAGAGGGAAGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSSSWAR*QREVSL
Trigger: TAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGA...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCAAGCTGGGCTCCCTaGAGTTGGCAATTTCATCAA +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPSWAP*SWQFHQ
Trigger: TTGATGAAATTGCCAACTTCAGGGAGCCCAGCTTGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGCAGTGGGATAAAGCATaGGGAGGGGTGTGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKQWDKA*GGVCPG
Trigger: CCCCGGACACACCCCTCCTCATGCTTTATCCCACTG...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCCAACCGTCCAAACGTaGTATGCTGCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDPTVQT*YAAVFR
Trigger: CCTGAAGACAGCAGCATATCACGTTTGGACGGTTGG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTCCTCTGTTCTCCTTATaGGTGGGACCAGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSPLFSL*VGPDGV
Trigger: GACCCCATCTGGTCCCACTCATAAGGAGAACAGAGG...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCTTCCTGCTGACAGCTaGGTGCTTGGGCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGLPADS*VLGPKS
Trigger: TGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGGATTTCATTTACTACTaGGAGGACAGTGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRDFIYY*EDSECP
Trigger: GGGGCACTCACTGTCCTCTCAGTAGTAAATGAAATC...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGGCAGAACAAGCATTTaGGGACACTCAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFGRTSI*GHSGSL
Trigger: CAGAGAGCCTGAGTGTCCTCAAATGCTTGTTCTGCC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGGCAGAACAAGCATTTaGGGACACTCAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTGRTSI*GHSGSL
Trigger: CAGAGAGCCTGAGTGTCCTCAAATGCTTGTTCTGCC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATTGGGATGCAGCCACTaGGGTGTCTGCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQLGCSH*GVCRSG
Trigger: TCCACTCCTGCAGACACCTCAGTGGCTGCATCCCAA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGTGCTCTGCCTCCCTGTaGGAAGTTGCTGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWCSASL*EVADSE
Trigger: TTCACTGTCAGCAACTTCTCACAGGGAGGCAGAGCA...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATTGCTCTGCCTCCCTGTaGGAAGTTGCTGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDCSASL*EVADSE
Trigger: TTCACTGTCAGCAACTTCTCACAGGGAGGCAGAGCA...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGAAGGTGACAGGAACTaGGCCAGCCTTGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAEGDRN*ASLASG
Trigger: CCCACTGGCAAGGCTGGCTCAGTTCCTGTCACCTTC...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGTCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCC +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWSGSLW*GRTAHP
Trigger: GGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGA...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372164.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAACGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQRLPQL*SSEVMA
Trigger: GGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCG...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR GCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTTGATGGAGAGAGATaGCCTGTCCACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWLDGER*PVHACG
Trigger: CCCACAGGCGTGGACAGGGCATCTCTCTCCATCAAG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCCTCAGTGAAGAACCATaGCCACCGCGCCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQALSEEP*PPRHRR
Trigger: GCGCCGGTGGCGCGGTGGGCATGGTTCTTCACTGAG...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCATGCTTGTATGTGGGATaGATGGAGGGAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSCLYVG*MEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCA...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATG +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSWGVGE*LYVGCM
Trigger: CATGCATCCCACATACAAGCACTCCCCCACTCCCCA...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAACCCTTTTCGCTCCATaGCCACAGCCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAETLFAP*PQPDSK
Trigger: CTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGT...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCETGSIP*IRVTLV
Trigger: CACCAAAGTGACCCGGATGCATGGAATCGACCCTGT...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFTGSIP*IRVTLV
Trigger: CACCAAAGTGACCCGGATGCATGGAATCGACCCTGT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGGAGTCGATGAGGTTTTaGAGATCGATATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGESMRF*RSISSR
Trigger: CCGGGACGATATCGATCTGCAAAACCTCATCGACTC...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCTCATGCAGCAGCAGTaGCCAGGCTTCAATCCCATG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQLMQQQ*PGFNPM
Trigger: CATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTCATGCAGCAGCAGTaGCCAGGCTTCAATCCCATG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLMQQQ*PGFNPM
Trigger: CATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGAGTGCACAGGAGGCCTaGCCTGTGCCTCTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWSAQEA*PVPLCG
Trigger: TCCGCACAGAGGCACAGGGCAGGCCTCCTGTGCACT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGCCCAGATAAGAAGCTaGCTGGGAAAGAAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNAQIRS*LGKKGR
Trigger: CCTCCCTTTCTTTCCCAGGCAGCTTCTTATCTGGGC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCAGGACATTCAGGAGGTaGAGTGTCTGGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSRTFRR*SVWCYR
Trigger: TCTGTAGCACCAGACACTGCACCTCCTGAATGTCCT...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAACTACAGTCACATGCATaGCTGCCACCTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQLQSHA*LPPPQW
Trigger: CCACTGGGGAGGTGGCAGGCATGCATGTGACTGTAG...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGGAGCCTTCCAACACTaGAGCCACCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNGAFQH*SHLQSH
Trigger: ATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTGCAGGTAGTCACCTaGAGCATCCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGLQVVT*SILLGT
Trigger: CGTGCCCAGGAGGATGCTGCAGGTGACTACCTGCAG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGTTTCTGGTAGCATCTaGGCTCCAGGCAAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPVSGSI*APGKKQ
Trigger: TTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAAC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCCATGTCCCCCAGCACTaGCCCCAGGTTCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAHVPQH*PQVPSP
Trigger: AGGGCTGGGAACCTGGGGGCAGTGCTGGGGGACATG...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACAGAGATGGAAAGGCTTaGCATGGTCCACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNRDGKA*HGPRST
Trigger: TGTGCTGCGTGGACCATGGCAAGCCTTTCCATCTCT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGATCACCCAGGCTGGAGTaGAGTGGCGTGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGSPRLE*SGVIST
Trigger: AGTCGAGATCACGCCACTGCACTCCAGCCTGGGTGA...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCGCCAGGGGAGCCCTGTaGCCCCAATCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVARGAL*PQSLFP
Trigger: AGGGAACAGAGATTGGGGGCACAGGGCTCCCCTGGC...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCCACACCACAGGCCCTaGCCACTGGGCTTGAGACTA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGPHHRP*PLGLRL
Trigger: TAGTCTCAAGCCCAGTGGGCAGGGCCTGTGGTGTGG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGATTTCTCCGCTTCTTTTaGCTAGGATCTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRFLRFF*LGSAEM
Trigger: CATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAA...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTCTGTGTCACCCAACTTaGCAGCCCAGAGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPLCHPT*QPRDLP
Trigger: TGGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAG...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGTCTTCAGGGCCATATaGGCCACAGCACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHVFRAI*ATALVP
Trigger: TGGAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481124.5
CDS-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCTTAAGATGGGGCACTaGCTCTGGGGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCLKMGH*LWGCRL
Trigger: GAGCCGACACCCCCAGAGCCAGTGCCCCATCTTAAG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACCCAGCAGACTGCGCTaGCACTCAGAGGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIPSRLR*HSEAQR
Trigger: CCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIGGCSM*RRKRGC
Trigger: ACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCC...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAACCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEPTVSG*PSWAGA
Trigger: AGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGG...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGTCTACAGGAATAGATaGGTCAGGCCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGVYRNR*VRPAGA
Trigger: GGCTCCTGCAGGCCTGACCCATCTATTCCTGTAGAC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTACGTGGGGCATGGTaGGTGGTGCAAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGLRGAW*VVQRKG
Trigger: CCCCTTCCTTTGCACCACCCACCATGCCCCACGTAG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCTGTGGACCATGCAGATaGTTTTTCAGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPACGPCR*FFSPAH
Trigger: GTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACA...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGTGCCAGGCTTCTTGTaGACCATGCAGATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGVPGFL*TMQMVF
Trigger: AAAAACCATCTGCATGGTCCACAAGAAGCCTGGCAC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCAGTGGCCTCTGCATaGAATCTCCCAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPVASA*NLPEKF
Trigger: GAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACCCTCTCTGCTCTGCTaGGAGCCTTCCAACACTGCA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSPSLLC*EPSNTA
Trigger: TGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGCAAGCTCCGCCTCCTaGGTTCACACCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKASSAS*VHTIPL
Trigger: CAGGGGAATGGTGTGAACCCAGGAGGCGGAGCTTGC...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACATTGGAAGACCCTGCTaGAATATAAGATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDIGRPC*NIRCRA
Trigger: TGCTCTGCATCTTATATTCCAGCAGGGTCTTCCAAT...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAATGAAGGGGAGGCTGTaGAAGGCAGAGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRMKGRL*KAEKWK
Trigger: TTTCCATTTCTCTGCCTTCCACAGCCTCCCCTTCAT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCACACACACCAGCAGTaGTCAGGCAGCAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGHTHQQ*SGSNRY
Trigger: GTACCTGTTGCTGCCTGACCACTGCTGGTGTGTGTG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCCACTCTGCTGCTTCTaGGGGCTCCCGGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGPLCCF*GLPGNF
Trigger: AAAGTTGCCCGGGAGCCCCCAGAAGCAGCAGAGTGG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAATGAGTGGGACCAGATaGGGTCCACCAACCGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGMSGTR*GPPTVQ
Trigger: TTGGACGGTTGGTGGACCCCATCTGGTCCCACTCAT...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCAGGTGTCTGCAGGAGTaGATGGAGAGGCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGRCLQE*MERQNK
Trigger: CTTGTTCTGCCTCTCCATCCACTCCTGCAGACACCT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAATTTTGCTGAGGAAATaGTACCCAGTTCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRILLRK*YPVPGR
Trigger: ACGGCCAGGAACTGGGTACCATTTCCTCAGCAAAAT...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGTGGTTAGTCTATTCTaGCTCTATCCTTCTGTAACC +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDVVSLF*LYPSVT
Trigger: GGTTACAGAAGGATAGAGCCAGAATAGACTAACCAC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGGCTGGAGTGCAGTaGCGTGATCTCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHQAGVQ*RDLDLL
Trigger: CAGTAAGTCGAGATCACGCCACTGCACTCCAGCCTG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGAACTGGCTCACACCGTaGACAACCTCCCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWNWLTP*TTSHKA
Trigger: GGCCTTGTGGGAGGTTGTCCACGGTGTGAGCCAGTT...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCACTAAGAGAGAGCTGCTaGCGTGCAGAGAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSLRESC*RAERSR
Trigger: TCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAG...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCTACAACCCAAGGTTGTaGCCCACCTTGCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFYNPRL*PTLPQI
Trigger: GATTTGGGGCAAGGTGGGCCACAACCTTGGGTTGTA...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCAAGAAGAGGGGGAGGTaGCCATACAACCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGKKRGR*PYNPRL
Trigger: CAACCTTGGGTTGTATGGCCACCTCCCCCTCTTCTT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAGAGGATCTCCTGATCTaGGCAGGATCCTTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSEDLLI*AGSLLG
Trigger: ACCTAGCAAGGATCCTGCCCAGATCAGGAGATCCTC...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CTCTCACTTATAGCGGGGGATAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCACACAAGGGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: LSLIAGDKPQAN*CGCGRHTRATE
Trigger: TTCAGTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTTATCCCCCGCTATAAGTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 72 bp GAACTGAAGCCTCCCACCAACAGTCATGGAGTGAGGTaGGAAGGGATCCTCCAGCCCTGGCCAACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ELKPPTNSHGVR*EGILQPWPTVS
Trigger: TGAAACTGTTGGCCAGGGCTGGAGGATCCCTTCCAACCTCACTCCATGACTGTTGGTGGGAGGCTTCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHGCSLS*RWTHPT
Trigger: AGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLTARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAACACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKHCLDV*DQRPCQ
Trigger: CTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTG...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATTCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCTCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCCATGCTGCTTTGCTTaGTGGAGAGAGATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGPCCFA*WREMPC
Trigger: ACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCACAGGCTTACTTCACTTaGACATGGCTGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSQAYFT*TWLRIL
Trigger: CAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTG...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGTTGCAGTCCATCCCTaGACGATGAGAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQVAVHP*TMRSGL
Trigger: CAGACCACTTCTCATCGTTCAGGGATGGACTGCAAC...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGATCTTCAGCTGAATCCTaGCATCATATCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGSSAES*HHIHTV
Trigger: CACAGTGTGGATATGATGTCAGGATTCAGCTGAAGA...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCGTCCCGGTAGGACTTaGTGTTGCTCTCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASRPGRT*CCSRRT
Trigger: AGTTCTTCGAGAGCAACATCAAGTCCTACCGGGACG...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACATGTGCATGGTGAGGTaGGAAGAGGGTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHMCMVR*EEGANA
Trigger: GGCATTTGCACCCTCTTCTCACCTCACCATGCACAT...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCTTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTLACAW*GEKRVQ
Trigger: TTGCACCCTCTTCTCACCTCACCATGCACATGCTAA...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATCTGAGACTGCTGGCTaGGAAGCCATCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSSETAG*EAIRWV
Trigger: AACCCACCTGATGGCTTCTCAGCCAGCAGTCTCAGA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTCTGAGACTGCTGGCTaGGAAGCCATCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLSETAG*EAIRWV
Trigger: AACCCACCTGATGGCTTCTCAGCCAGCAGTCTCAGA...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGGAAAGGCCCACCTGTaGAGGTCATTCAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPGKAHL*RSFSTP
Trigger: TGGAGTGCTGAATGACCTTCACAGGTGGGCCTTTCC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTTCCTCCTGGGCACGATaGCAGAGGGAAGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPSSWAR*QREVSL
Trigger: TAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGA...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCACTTCATGTTTTCCTaGGGCACCCTGGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWHFMFS*GTLETP
Trigger: TGGCGTCTCCAGGGTGCCTCAGGAAAACATGAAGTG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAAGCTGGGCTCCCTaGAGTTGGCAATTTCATCAA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGPSWAP*SWQFHQ
Trigger: TTGATGAAATTGCCAACTTCAGGGAGCCCAGCTTGG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGCTACTTATTAAAATGTaGTCCCCCATCCTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGLLIKM*SPILAN
Trigger: GTTAGCCAGGATGGGGGATCACATTTTAATAAGTAG...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCCAACCGTCCAAACGTaGTATGCTGCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAPTVQT*YAAVFR
Trigger: CCTGAAGACAGCAGCATATCACGTTTGGACGGTTGG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCAAACCCTGGATTTCCTaGCCTTCCAGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTKPWIS*PSSSPC
Trigger: ACATGGACTGCTGGAAGGTCAGGAAATCCAGGGTTT...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAACAAAGGCAGTGTGGCTaGATTGGCTGCAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEQRQCG*IGCRWS
Trigger: ACTCCACCTGCAGCCAATTCAGCCACACTGCCTTTG...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGTCAGGAGAATCACTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWVRRIT*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGAC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCATCCCCAACCAGTGTaGCAAGGAGCCCACCATCTC +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGHPQPV*QGAHHL
Trigger: GAGATGGTGGGCTCCTTGTCACACTGGTTGGGGATG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGAGACTAAGGAGGTaGGAACCCTGGCCCACACCA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGRRLRR*EPWPTP
Trigger: TGGTGTGGGCCAGGGTTCTCACCTCCTTAGTCTCCT...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGTGCTGGACAAGCCTGTaGCTCAGGACTCGGAATGAT +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQCWTSL*LRTRND
Trigger: ATCATTCCGAGTCCTGAGTCACAGGCTTGTCCAGCA...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATTCACTGCAGCCTCATaGGAGACCCAGAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSFTAAS*ETQSHS
Trigger: ACTGTGGCTCTGGGTCTCTCATGAGGCTGCAGTGAA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAACCAACAGTCATGGAGTaGGGTTGGAAGGGATCCTCC +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEPTVME*GWKGSS
Trigger: GGAGGATCCCTTCCAACCTCACTCCATGACTGTTGG...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACCAAGATGGTTCCAATaGTGCTTTCCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPPRWFQ*CFPPGT
Trigger: AGTTCCAGGAGGAAAGCATCATTGGAACCATCTTGG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGTCCATATGACCAATaGTGGCCAGACAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGSPYDQ*WPDSPV
Trigger: GACAGGGCTGTCTGGCCATCATTGGTCATATGGACT...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGCGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKRLPQL*SSEVMA
Trigger: GGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCG...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR GCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTCAGACATGCTTGAGCTaGAGGGGGTCTGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPQTCLS*RGSESS
Trigger: GCTTGACTCAGACCCCCTGCAGCTCAAGCATGTCTG...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGCCCCCATGCTGCTTTaGTTGATGGAGAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWAPMLL*LMERDA
Trigger: GGCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTGCTTGTATGTGGGATaGATGGAGGGAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHCLYVG*MEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCA...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGAGCTTCTGAGCAGCTaGAGCCTGGGGTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGELLSS*SLGLWL
Trigger: TAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLTGSIP*IRVTLV
Trigger: CACCAAAGTGACCCGGATGCATGGAATCGACCCTGT...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGAGTCGATGAGGTTTTaGAGATCGATATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNESMRF*RSISSR
Trigger: CCGGGACGATATCGATCTGCAAAACCTCATCGACTC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWVFRAI*ATALVS
Trigger: GCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQVFRAI*ATALVS
Trigger: GCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGAC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCTGCCCTGTGCCTCTGTaGGGACAGCCGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSCPVPL*GQPMLG
Trigger: GCCCAGCATCGGCTGTCCGCACAGAGGCACAGGGCA...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGCCCAGATAAGAAGCTaGCTGGGAAAGAAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGAQIRS*LGKKGR
Trigger: CCTCCCTTTCTTTCCCAGGCAGCTTCTTATCTGGGC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCAGGACATTCAGGAGGTaGAGTGTCTGGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTRTFRR*SVWCYR
Trigger: TCTGTAGCACCAGACACTGCACCTCCTGAATGTCCT...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCTGGTGAGGACAGCTaGAGCAGAGTCCTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPAGEDS*SRVLSR
Trigger: TCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGGAGCCTTCCAACACTaGAGCCACCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLGAFQH*SHLQSH
Trigger: ATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTGGAGCCTTCCAACACTaGAGCCACCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSGAFQH*SHLQSH
Trigger: ATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCC...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCCCAAGTTCTACAATaGCCACTTCATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPQVLQ*PLHVFL
Trigger: CAGGAAAACATGAAGTGGGCATTGTAGAACTTGGGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGCGGGGATTCAGGACAGGCCAGTGCTAGGTGGGGAGTGCACAGGAGGCCTGAGGTGCACATCACCATaGCCGACTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KAGIQDRPVLGGECTGGLRCTSP*PTNFCI
Trigger: AATACAAAAATTAGTCGGGCATGGTGATGTGCACCT...CAGGCCTCCTGTGCACTCCCCACCTAGCACTGGCCTGTCCTGAATCCCCGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGGATGACCTGAGTAGATaGATGGACATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGLSQALLAATGALSVFQDDLSR*MDIFRK
Trigger: CTTCCTGAAAATGTCCATGCATCTACTCAGGTCATC...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCGTCCAAACGTGATATaGTGCTGTCTTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFRPNVI*CCLQGT
Trigger: TGTGCCCTGAAGACAGCAGCATATCACGTTTGGACG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCCTGCTGACAGCTGAGTaGTTGGGCCTAAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFLLTAE*LGLNQH
Trigger: ATGCTGATTTAGGCCCAAGCACTCAGCTGTCAGCAG...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCTGCTGACAGCTGAGTaGTTGGGCCTAAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGLLTAE*LGLNQH
Trigger: ATGCTGATTTAGGCCCAAGCACTCAGCTGTCAGCAG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACAGGGCACCTGGTGGATaGTCTAACCCTCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHRAPGG*SNPQDS
Trigger: TGAATCCTGAGGGTTAGAGCATCCACCAGGTGCCCT...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGATCATTGATCATGGCCTaGGAGTTAGTGTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRSLIMA*ELVSSE
Trigger: CTCTGATGACACTAACTCGCAGGCCATGATCAATGA...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTGCCTCGTCAGTGCCTaGCTACATCGTTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHCLVSA*LHRCSL
Trigger: CAATGAGCAACGATGTAGGCAGGCACTGACGAGGCA...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTTGCCTCGTCAGTGCCTaGCTACATCGTTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAACLVSA*LHRCSL
Trigger: CAATGAGCAACGATGTAGGCAGGCACTGACGAGGCA...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCATCATGGGCACTGAGCTaGCTTCCTGCTGTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWASWALS*LPAVPR
Trigger: ACGAGGCACAGCAGGAAGGCAGCTCAGTGCCCATGA...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCGCCCTTCCTGAGGTCTaGTTCCCACATGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLALPEV*FPHEVL
Trigger: GAGGACTTCATGTGGGAAGCAGACCTCAGGAAGGGC...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAGCCCTAAGAGAGAGCTaGTGGCGTGCAGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKALRES*WRAERS
Trigger: GCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAGGGC...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGCACTCGTGTTCCCCTaGAGAGGAAAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGALVFP*RGKVCV
Trigger: CACGCAGACCTTTCCTCTGCAGGGGAACACGAGTGC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGTAACCAGCAGGGTGTaGCACAGGGCTTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPVTSRV*HRALVH
Trigger: GTGGACCAAAGCCCTGTGGCACACCCTGCTGGTTAC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCAGCTTTCCAGCGCCTaGATGCAGCCTTTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWQLSSA*MQPFVK
Trigger: CTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCATGGGGCACTGGCTCTaGGGGTGTCGGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSMGHWL*GCRLLS
Trigger: GGAGAGGAGCCGACACCCCCAGAGCCAGTGCCCCAT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGAACAAGGGGGACCCTTaGTCTTCAGCACCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWNKGDP*SSAPAS
Trigger: GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTT...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACCAGTCCACGCACTaGCTCAGGCTTACTTCACTT +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLHQSTH*LRLTSL
Trigger: AAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCACCAGTCCACGCACTaGCTCAGGCTTACTTCACTT +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAHQSTH*LRLTSL
Trigger: AAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGTG...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTGTATGTGGGATGCATaGAGGGAGGCTGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFCMWDA*REAAVC
Trigger: ACATACTGCAGCCTCCCTCCATGCATCCCACATACA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGATCCCTGGGCTTGCAGTaGGGAGGGTCAGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGSLGLQ*GGSGFK
Trigger: TTTGAATCCTGACCCTCCCCACTGCAAGCCCAGGGA...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGACTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAATTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGATTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGAGGCATCTAGTGAGGTaGGCACTGCCACCAACCCCC +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWRHLVR*ALPPTP
Trigger: GGGGGTTGGTGGCAGTGCCCACCTCACTAGATGCCT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGTGGGGCATGGTGGGTaGTGCAAAGGAAGGGGTACA +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAVGHGG*CKGRGT
Trigger: TGTACCCCTTCCTTTGCACCACCCACCATGCCCCAC...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCAGCTTTCAGCTACGTaGGGCATGGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCQLSAT*GMVGGA
Trigger: TGCACCACCCACCATGCCCCACGTAGCTGAAAGCTG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGAGAGGTCAGAGAACTaGCGAGCCTGGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPERSEN*RAWASE
Trigger: TTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGAGAGGTCAGAGAACTaGCGAGCCTGGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAERSEN*RAWASE
Trigger: TTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTC...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGTGCCAGGCTTCTTGTaGACCATGCAGATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPVPGFL*TMQMVF
Trigger: AAAAACCATCTGCATGGTCCACAAGAAGCCTGGCAC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGATTTCATTGTTATTCATaGGGAAACCCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRFHCYS*GNPVPG
Trigger: GCCTGGCACTGGGTTTCCCCATGAATAACAATGAAA...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCCAGTGGCCTCTGCATaGAATCTCCCAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNPVASA*NLPEKF
Trigger: GAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCCCTCTCTGCTCTGCTaGGAGCCTTCCAACACTGCA +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCPSLLC*EPSNTA
Trigger: TGCAGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCATACCAAGATCCATCATaGGGGACAGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSYQDPS*GTGSHS
Trigger: GCTATGGGAACCTGTCCCCCATGATGGATCTTGGTA...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGGCTCTAAAGGTGTATaGCTCCCCAGATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFGSKGV*LPRFLE
Trigger: CTCCAGAAATCTGGGGAGCCATACACCTTTAGAGCC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCGGCTCTAAAGGTGTATaGCTCCCCAGATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFGSKGV*LPRFLE
Trigger: CTCCAGAAATCTGGGGAGCCATACACCTTTAGAGCC...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGCCTTGAACAGGAATTaGCCAAGCCTTGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFALNRN*PSLANL
Trigger: CAAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCTCTCTCGTAGGGACTaGCAGCCACAGATAAAATTC +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTLSRRD*QPQIKF
Trigger: GAATTTTATCTGTGGCTGCCAGTCCCTACGAGAGAG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATCCTACCCTGGCCCCTTaGCAGTTGATGGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDPTLAP*QLMATL
Trigger: CAGAGTGGCCATCAACTGCCAAGGGGCCAGGGTAGG...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGTGGCTCTGCTGGATaGACAAGTGGTGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWSGSAG*TSGGRK
Trigger: TTTCCTTCCACCACTTGTCCATCCAGCAGAGCCACT...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAAGTTTTGGATGTGGGTaGAATTGGGGGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRSFGCG*NWGLEK
Trigger: TTTCTCCAACCCCCAATTCCACCCACATCCAAAACT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGCAAGCCCCGCCTCCTaGGTTCAAGAAATTCTACTG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLASPAS*VQEILL
Trigger: CAGTAGAATTTCTTGAACCCAGGAGGCGGGGCTTGC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACACAGCTACAGGAGGCTaGACCCACAACAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHTATGG*THNRKG
Trigger: TCCTTTCCTGTTGTGGGTCCAGCCTCCTGTAGCTGT...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGCTCTTGTTTTCAGCTaGACAGTCCTTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGALVFS*TVLPGS
Trigger: TGACCCTGGAAGGACTGTCCAGCTGAAAACAAGAGC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTCCAGGACCCCAGATaGCAAACTGGCTCACACCGT +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGLQDPR*QTGSHR
Trigger: ACGGTGTGAGCCAGTTTGCCATCTGGGGTCCTGGAG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTAAGAGAGAGCTGCTaGCGTGCAGAGAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLRESC*RAERSR
Trigger: TCTGCTTCTCTCTGCACGCCAGCAGCTCTCTCTTAG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAATCATGGGGAGGGCTTaGGATTTTCCTCATGATGGG +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESIMGRA*DFPHDG
Trigger: CCCATCATGAGGAAAATCCCAAGCCCTCCCCATGAT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCATGGGGAGGGCTTaGGATTTTCCTCATGATGGG +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDIMGRA*DFPHDG
Trigger: CCCATCATGAGGAAAATCCCAAGCCCTCCCCATGAT...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAATTGTGAGAACCAGGTaGAGAACTGAAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSIVRTR*RTEASH
Trigger: GTGGGAGGCTTCAGTTCTCCACCTGGTTCTCACAAT...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAAGGGGAAACAGCCAGTaGACTCTGGCCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAERGNSQ*TLAKVQ
Trigger: CTGGACTTTGGCCAGAGTCCACTGGCTGTTTCCCCT...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp AGCATCTGCGCTCCAGGCAAGAAGCAACACCCTACCTaGTCTCCCCACCTCTATGGCACAGAAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SICAPGKKQHPT*SPHLYGTEREQ
Trigger: CTGTTCTCTTTCTGTGCCATAGAGGTGGGGAGACAAGGTAGGGTGTTGCTTCTTGCCTGGAGCGCAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp AACCACCCCAGTGGCTTGAGTGTTTCTCCGCTTCTTTaGCCTAGGATCTGCGGAGATGGACAGGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: NHPSGLSVSPLL*PRICGDGQDRR
Trigger: TCTCCTGTCCTGTCCATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWGCSLS*RWTHPT
Trigger: AGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGGCSLS*RWTHPT
Trigger: AGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQGCSLS*RWTHPT
Trigger: AGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAACAGCGAGATGGCGATaGAGACGCCAGCCACAATGT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPTARWR*RRQPQC
Trigger: ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGT...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCACGTCCCGGTAGGACTTaGTGTTGCTCTCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPARPGRT*CCSRRT
Trigger: AGTTCTTCGAGAGCAACATCAAGTCCTACCGGGACG...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCCACTGGTTAGCTTTCTaGAGGGAGTCGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIHWLAF*RESMRF
Trigger: AAACCTCATCGACTCCCTTCAGAAAGCTAACCAGTG...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACTAGACCTATGGAGTTaGAGTTTCTCCAGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESLDLWS*SFSSSH
Trigger: GTGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIAETAT*PALILA
Trigger: AGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGC...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATCGTCTATGTTCCTCTaGGACTGCTGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQSSMFL*DCWLRS
Trigger: GCTTCTCAGCCAGCAGTCTCAGAGGAACATAGACGA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGGAAAGGCCCACCTGTaGAGGTCATTCAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCGKAHL*RSFSTP
Trigger: TGGAGTGCTGAATGACCTTCACAGGTGGGCCTTTCC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTCCTTTAATGCAGCCTTaGACAGGAATTGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSPLMQP*TGIGQA
Trigger: GGCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGG...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGTTGTTTAGGCCAGTCTaGATTGGGTTTTCTATTACC +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGLFRPV*IGFSIT
Trigger: GGTAATAGAAAACCCAATTCAGACTGGCCTAAACAA...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACTCCAAATGCCTGCTaGGGCTTGCCACAGACCTCG +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVTPNAC*GLPQTS
Trigger: CGAGGTCTGTGGCAAGCCTCAGCAGGCATTTGGAGT...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCAAAGGCAGTGTGGCTaGATTGGCTGCAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCQRQCG*IGCRWS
Trigger: ACTCCACCTGCAGCCAATTCAGCCACACTGCCTTTG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACTTCCTGCTGACAGCTaGGTGCTTGGGCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSLPADS*VLGPKS
Trigger: TGATTTAGGCCCAAGCACTCAGCTGTCAGCAGGAAG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCACTCCTGACCTCAGGTaGCCCACCCGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSTPDLR*PTRLGF
Trigger: GAAGCCAAGGCGGGTGGGTCACCTGAGGTCAGGAGT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAAGGAACCTGGGTCCATaGAAGACTGTGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGRNLGP*KTVWSR
Trigger: TCTGCTCCACACAGTCTTTCATGGACCCAGGTTCCT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGTCTGTCCCTTAATCTaGACACAGAGCACACACATC +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNVCPLI*TQSTHI
Trigger: GATGTGTGTGCTCTGTGTTCAGATTAAGGGACAGAC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGAGGAGACTAAGGAGGTaGGAACCCTGGCCCACACCA +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWRRLRR*EPWPTP
Trigger: TGGTGTGGGCCAGGGTTCTCACCTCCTTAGTCTCCT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTGCTGGACAAGCCTGTaGCTCAGGACTCGGAATGAT +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWCWTSL*LRTRND
Trigger: ATCATTCCGAGTCCTGAGTCACAGGCTTGTCCAGCA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAACACACACACATTTATaGTTACAACAGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRTHTHL*LQQQSP
Trigger: TGGGCTCTGCTGTTGTAATCATAAATGTGTGTGTGT...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGGTTTAGATTATAAATaGGAGCACATCCGTAGGATA +
Preference number: 4 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDGLDYK*EHIRRI
Trigger: TATCCTACGGATGTGCTCTCATTTATAATCTAAACC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTGGTTTAGATTATAAATaGGAGCACATCCGTAGGATA +
Preference number: 4 (lower is better)
Translates to: TQGDSGQGTPVAPVHALAGLDYK*EHIRRI
Trigger: TATCCTACGGATGTGCTCTCATTTATAATCTAAACC...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATAGGAACACACCACACTaGCACTCAGAAAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDRNTPH*HSERCH
Trigger: ATGGCATCTTTCTGAGTGTCAGTGTGGTGTGTTCCT...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCATCAGCAACAGCAGGTaGGAGTCTGGAGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIISNSR*ESGVVS
Trigger: AGAAACTACTCCAGACTCTCACCTGCTGTTGCTGAT...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAATCAGCAACAGCAGGTaGGAGTCTGGAGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEISNSR*ESGVVS
Trigger: AGAAACTACTCCAGACTCTCACCTGCTGTTGCTGAT...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCGGTGTCCTGCAGACATaGTTGAGCTGCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVGVLQT*LSCRGS
Trigger: AGACCCCCTGCAGCTCAAGCATGTCTGCAGGACACC...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATGCTTGTATGTGGGATaGATGGAGGGAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSCLYVG*MEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTGGGGAGTGGGGGAGTaGTTGTATGTGGGATGCATG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKWGVGE*LYVGCM
Trigger: CATGCATCCCACATACAAGCACTCCCCCACTCCCCA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQTGSIP*IRVTLV
Trigger: CACCAAAGTGACCCGGATGCATGGAATCGACCCTGT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSTGSIP*IRVTLV
Trigger: CACCAAAGTGACCCGGATGCATGGAATCGACCCTGT...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCGTGCTGATGATGGACTaGCTTTACCATCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIVLMMD*LYHPSF
Trigger: GAAGGATGGATGGTAAAGGCAGTCCATCATCAGCAC...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGTGCTGATGATGGACTaGCTTTACCATCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFVLMMD*LYHPSF
Trigger: GAAGGATGGATGGTAAAGGCAGTCCATCATCAGCAC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAAGTGCACAGGAGGCCTaGCCTGTGCCTCTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISISAQEA*PVPLCG
Trigger: TCCGCACAGAGGCACAGGGCAGGCCTCCTGTGCACT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAAGAAGAGGGTGCAAATaGCACAGCTGGCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWARRGCK*HSWPPT
Trigger: GGTTGGAGGCCAGCTGTGGCATTTGCACCCTCTTCT...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTAGGACATTCAGGAGGTaGAGTGTCTGGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLRTFRR*SVWCYR
Trigger: TCTGTAGCACCAGACACTGCACCTCCTGAATGTCCT...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGCTTCTTGTGGACCATaGAGATGGTTTTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGASCGP*RWFFSP
Trigger: TGGGCTGAAAAACCATCTGCATGGTCCACAAGAAGC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCCCACCTACAGTCACATaGATGCCTGCCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVPPTVT*MPATSP
Trigger: TGGGGAGGTGGCAGGCATGCATGTGACTGTAGGTGG...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGTGCTGGGACCACTGCTaGCTCCCTCCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWCWDHC*LPPFSA
Trigger: TGCTGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCA...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGCAGGATGCCTCAGGTaGTGGGACCACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSAGCLR*WDHCCL
Trigger: GAGGCAGCAGTGGTCCCAGCACCTGAGGCATCCTGC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCCCAAGTTCTACAATaGCCACTTCATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPQVLQ*PLHVFL
Trigger: CAGGAAAACATGAAGTGGGCATTGTAGAACTTGGGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TGGCCACAAGAGGAGCCCTGGCCAACAGTTTCAGGCTGGCCATCTTGGGCTGGGAGGTGCACATCACCATaGCCGACTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: WPQEEPWPTVSGWPSWAGRCTSP*PTNFCI
Trigger: AATACAAAAATTAGTCGGGCATGGTGATGTGCACCT...CCCAGCCCAAGATGGCCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCAGCCCAAGTGCGTAGCTaGAGTGTGGGAGTTACTATC +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAAQVRS*SVGVTI
Trigger: GATAGTAACTCCCACACTGCAGCTACGCACTTGGGC...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCACTGAAGGAATTCATGTaGCGTCTGTCCCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPLKEFM*RLSLNL
Trigger: CAGATTAAGGGACAGACGGCACATGAATTCCTTCAG...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATTTTCTCCGCTTCTTTTaGCTAGGATCTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDFLRFF*LGSAEM
Trigger: CATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAA...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCGGCCAACAGTTTCACTaGAGCCTCATGAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLGQQFH*SLMRDP
Trigger: TGGGTCTCTCATGAGGCTGCAGTGAAACTGTTGGCC...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGCAGCTTTCCAGCGCCTaGATGCAGCCTTTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKQLSSA*MQPFVK
Trigger: CTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTG...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCACATTCTCTGTCTCTaGGTAGACTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGHILCL*VDSRGM
Trigger: CATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCAGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAGGCSM*RRKRGC
Trigger: ACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCC...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCCCACAAGAGGAGCCCTaGCCAACAGTTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVPQEEP*PTVSGW
Trigger: CCAGCCTGAAACTGTTGGCCAGGGCTCCTCTTGTGG...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCATTTTTGCGCAGGATCTaGCACGCAGCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAFLRRI*HAAGEG
Trigger: CCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAAAAA...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGGCAAGTTTTTAGGATaGGAAAGGAAGGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEGKFLG*ERKASD
Trigger: ATCGCTGGCCTTCCTTTCCCATCCTAAAAACTTGCC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATCAGCTTTCAGCTACGTaGGGCATGGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDQLSAT*GMVGGA
Trigger: TGCACCACCCACCATGCCCCACGTAGCTGAAAGCTG...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCCAGTGGCCTCTGCATaGAATCTCCCAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQPVASA*NLPEKF
Trigger: GAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAGCCTTGAACAGGAATTaGCCAAGCCTTGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGALNRN*PSLANL
Trigger: CAAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGC...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGTTTCCTGAGGCACCCTaGAGACGCCAAAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQFPEAP*RRQKHL
Trigger: CAAATGCTTTTGGCGTCTCCAGGGTGCCTCAGGAAA...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAGTAAATGGACTCCTCTaGTACAAAGGCAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEVNGLL*YKGKAH
Trigger: ATGGGCCTTGCCTTTGTACCAGAGGAGTCCATTTAC...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGATGGAAGGCAGAGAAATaGAAACAAGATCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRWKAEK*KQDPVD
Trigger: GTCAACAGGATCTTGTTTCCATTTCTCTGCCTTCCA...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATGTTCTCCTTATGAGTaGGACCAGATGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQCSPYE*DQMGST
Trigger: GGTGGACCCCATCTGGTCCCACTCATAAGGAGAACA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTACTACCTCTCAGAGATaGAAAGGCTTGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPTTSQR*KGLPWS
Trigger: GGACCATGGCAAGCCTTTCCATCTCTGAGAGGTAGT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTACTACCTCTCAGAGATaGAAAGGCTTGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGTTSQR*KGLPWS
Trigger: GGACCATGGCAAGCCTTTCCATCTCTGAGAGGTAGT...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAAGTTTTGGATGTGGGTaGAATTGGGGGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPSFGCG*NWGLEK
Trigger: TTTCTCCAACCCCCAATTCCACCCACATCCAAAACT...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGAGTGGTTAGTCTATTCTaGCTCTATCCTTCTGTAACC +
Preference number: 4 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRVVSLF*LYPSVT
Trigger: GGTTACAGAAGGATAGAGCCAGAATAGACTAACCAC...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAACAGCTACAGGAGGCTaGACCCACAACAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQTATGG*THNRKG
Trigger: TCCTTTCCTGTTGTGGGTCCAGCCTCCTGTAGCTGT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGCTAAACCATGGGGCCTaGGGCACAGACCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWLNHGA*GTDHCC
Trigger: ACAGCAGTGGTCTGTGCCCCAGGCCCCATGGTTTAG...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAAGTAGTCATGTCCTCTaGGGGTTCTGTGCATATATA +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRSSHVL*GFCAYI
Trigger: TATATATGCACAGAACCCCCAGAGGACATGACTACT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCTCTGATAACTCACTCTaGGGGAAATTATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: QVPWYPLETTQPASSACCSDNSL*GKLYCE
Trigger: CTCACAATATAATTTCCCCCAGAGTGAGTTATCAGA...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCAGGAAGGCTAGGAAGTaGCAATGGAGAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGRKARK*QWRNHP
Trigger: TGGATGGTTTCTCCATTGCCACTTCCTAGCCTTCCT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CTGTGCCTCGTCAGTGCCTGCCTACATCGTTGCTCATaGATCATGGCCTGCGAGTTAGTGTCATCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LCLVSACLHRCS*IMACELVSSEE
Trigger: TTCCTCTGATGACACTAACTCGCAGGCCATGATCAATGAGCAACGATGTAGGCAGGCACTGACGAGGCACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGCCATGCTGCTTTGCTTaGTGGAGAGAGATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKPCCFA*WREMPC
Trigger: ACAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGG...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCCTGCAAACAACCCCTaGTATGTGCATGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGPANNP*YVHVPA
Trigger: TGCTGGGACATGCACATATCAGGGGTTGTTTGCAGG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATCACTTGAACATGGCTaGGGATCCTGCAAACAACCC +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSSLEHG*GSCKQP
Trigger: GGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGAGAGGAAGAGGAAGTaGAATGGTGTGAGAACATTC +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFERKRK*NGVRTF
Trigger: GAATGTTCTCACACCATTTCACTTCCTCTTCCTCTC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAAAGACCAGAAGACAGTaGGGCCACGCTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIKTRRQ*GHAGEW
Trigger: CCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTCTT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCTCTGAAGGGAGTCGATaGGGTTTTGCAGATCGATAT +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDISEGSR*GFADRY
Trigger: ATATCGATCTGCAAAACCTCATCGACTCCCTTCAGA...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACTCTGAAGGGAGTCGATaGGGTTTTGCAGATCGATAT +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNSEGSR*GFADRY
Trigger: ATATCGATCTGCAAAACCTCATCGACTCCCTTCAGA...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCATTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPALACAW*GEKRVQ
Trigger: TTGCACCCTCTTCTCACCTCACCATGCACATGCTAA...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTCGTCTATGTTCCTCTaGGACTGCTGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKSSMFL*DCWLRS
Trigger: GCTTCTCAGCCAGCAGTCTCAGAGGAACATAGACGA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTCCTTTAATGCAGCCTTaGACAGGAATTGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPPLMQP*TGIGQA
Trigger: GGCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGG...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCATGGGTGTGATGACCTaGGTAGATGCATGGACATTT +
Preference number: 4 (lower is better)
Translates to: THSSCSSSAQASIPCPHFMGVMT*VDAWTF
Trigger: AAATGTCCATGCATCTACTCAGGTCATCACACCCAT...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGTTGTTTAGGCCAGTCTaGATTGGGTTTTCTATTACC +
Preference number: 4 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRLFRPV*IGFSIT
Trigger: GGTAATAGAAAACCCAATTCAGACTGGCCTAAACAA...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCAAAACCCTGGATTTCCTaGCCTTCCAGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAKPWIS*PSSSPC
Trigger: ACATGGACTGCTGGAAGGTCAGGAAATCCAGGGTTT...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCTCCTCAGAGCCCAGGTaGTACACACATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGSSEPR*YTHSWM
Trigger: CATCCAGGAATGTGTGTATCACCTGGGCTCTGAGGA...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAAGGAACCTGGGTCCATaGAAGACTGTGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKRNLGP*KTVWSR
Trigger: TCTGCTCCACACAGTCTTTCATGGACCCAGGTTCCT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGTCTGTCCCTTAATCTaGACACAGAGCACACACATC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAVCPLI*TQSTHI
Trigger: GATGTGTGTGCTCTGTGTTCAGATTAAGGGACAGAC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCAAATCTGGAGGGCACTaGAGGAATTCATGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLKSGGH*RNSCAV
Trigger: GACGGCACATGAATTCCTTCAGTGCCCTCCAGATTT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGTCTCAGCCCAGGACTaGCTCTTTTTAACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAVSAQD*LFLTQR
Trigger: CCTTTGAGTTAAAAAGAGTCAGTCCTGGGCTGAGAC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTTGGGATTTTCCTCATaGTGGGAGCAGTGGCATGTA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHLGFSS*WEQWHV
Trigger: TACATGCCACTGCTCCCATCATGAGGAAAATCCCAA...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGAGCTTCTGAGCAGCTaGAGCCTGGGGTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAELLSS*SLGLWL
Trigger: TAGCCACAACCCCAGGCTGCAGCTGCTCAGAAGCTC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAGTGTTCACAACTTTTTaGGCAGGATCTGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEVFTTF*AGSGTQ
Trigger: CTGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACAC...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR GCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGAGTCGATGAGGTTTTaGAGATCGATATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSESMRF*RSISSR
Trigger: CCGGGACGATATCGATCTGCAAAACCTCATCGACTC...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTGTGCTGATGATGGACTaGCTTTACCATCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAVLMMD*LYHPSF
Trigger: GAAGGATGGATGGTAAAGGCAGTCCATCATCAGCAC...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTGCTTCTTGTGGACCATaGAGATGGTTTTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSASCGP*RWFFSP
Trigger: TGGGCTGAAAAACCATCTGCATGGTCCACAAGAAGC...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGGCTTCTTGTGGACCATaGAGATGGTTTTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQASCGP*RWFFSP
Trigger: TGGGCTGAAAAACCATCTGCATGGTCCACAAGAAGC...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCTGCTGGGACCACTGCTaGCTCCCTCCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQACWDHC*LPPFSA
Trigger: TGCTGAGAAAGGAGGGAGGCAGCAGTGGTCCCAGCA...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACGAATTGGCCAAGCCTTaGCAACTTGATAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNELAKP*QLDKEQ
Trigger: TTGCTCCTTATCAAGTTGGCAAGGCTTGGCCAATTC...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGATGCCTGCTGAGGCTTaGCACAGACCTCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWMPAEA*HRPRSL
Trigger: AAGGCTTCGAGGTCTGTGGCAAGCCTCAGCAGGCAT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACGTCCAAACGTGATATaGTGCTGTCTTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSRPNVI*CCLQGT
Trigger: TGTGCCCTGAAGACAGCAGCATATCACGTTTGGACG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGCTGCCTTCCTGCTGTaGCTCGTCAGTGCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSAAFLL*LVSACL
Trigger: TAGGCAGGCACTGACGAGGCACAGCAGGAAGGCAGC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGCCCAAGTGCGTAGCTaGAGTGTGGGAGTTACTATC +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAAQVRS*SVGVTI
Trigger: GATAGTAACTCCCACACTGCAGCTACGCACTTGGGC...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCTTCAAGAAATTCTACTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTFKKFY*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGTAGAATTTCTTGAA...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCAGAGAGCTGCTGGCGTaGAGAGAGAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVRELLA*REKQRC
Trigger: GCATCTCTGCTTCTCTCTGCACGCCAGCAGCTCTCT...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCAGCAGAGCCCAGGCTTaGAGCCAACCGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSSRAQA*SQPDLC
Trigger: ACACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAATGCAGTCACAAGTTTaGGCAGGTAACAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEMQSQV*AGNKGD
Trigger: GTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCAT...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPEAVVG*FLRHSR
Trigger: CCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAGGAGGCTGCAGTATGTaGAGGAGAAAGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPGGCSM*RRKRGC
Trigger: ACAGCCTCTCTTTCTCCTCCACATACTGCAGCCTCC...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGGGAGTGCTTGTATGTaGGATGCATGGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDGSACM*DAWREA
Trigger: AGCCTCCCTCCATGCATCCCACATACAAGCACTCCC...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGATCCCTTGGTTCCTCTaGCAGCCGCGTTTACCACTG +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWIPWFL*QPRLPL
Trigger: CAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGAT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACAACTTGTGCGGCTGTaGCCGGCACACAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIQLVRL*PAHKGN
Trigger: GTTGCCCTTGTGTGCCGGCCACAGCCGCACAAGTTG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAATTTCATTGTTATTCATaGGGAAACCCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCEFHCYS*GNPVPG
Trigger: GCCTGGCACTGGGTTTCCCCATGAATAACAATGAAA...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTACCAAGATCCATCATaGGGGACAGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWYQDPS*GTGSHS
Trigger: GCTATGGGAACCTGTCCCCCATGATGGATCTTGGTA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTTACCAAGATCCATCATaGGGGACAGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPYQDPS*GTGSHS
Trigger: GCTATGGGAACCTGTCCCCCATGATGGATCTTGGTA...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTTTTCCTGAGGCACCCTaGAGACGCCAAAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPFPEAP*RRQKHL
Trigger: CAAATGCTTTTGGCGTCTCCAGGGTGCCTCAGGAAA...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTAGGCCCATCTGTTCTTaGCACACTCCTACAACTGAT +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAARPICS*HTPTTD
Trigger: ATCAGTTGTAGGAGTGTGCCAAGAACAGATGGGCCT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTGTAAATGGACTCCTCTaGTACAAAGGCAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSVNGLL*YKGKAH
Trigger: ATGGGCCTTGCCTTTGTACCAGAGGAGTCCATTTAC...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCATTTCACAGCCGCATaGTTTCAGTGGGATAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFHFTAA*FQWDKA
Trigger: TGCTTTATCCCACTGAAACCATGCGGCTGTGAAATG...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCACTGATGCACTTGAGTaGCAGAGACTTGGGACTAAA +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDITDALE*QRLGTK
Trigger: TTTAGTCCCAAGTCTCTGCCACTCAAGTGCATCAGT...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGTGACCCACCCGCCTTaGCTTCCCAAAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAVTHPP*LPKVLG
Trigger: TCCCAGTACTTTGGGAAGCCAAGGCGGGTGGGTCAC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCTGTGCCACAGGGCTTTaGTCCACATTAGATAGACAA +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCCATGL*STLDRQ
Trigger: TTGTCTATCTAATGTGGACCAAAGCCCTGTGGCACA...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCAACTGGCAAAAATCATaGGGAGGGCTTGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFNWQKS*GGLGIF
Trigger: GAAAATCCCAAGCCCTCCCCATGATTTTTGCCAGTT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GTTCTGTGGACCGACACCCGTAAGACCCTAGAGCTGGAAAGGCCCACCTGTGAAAACTGGCAAAAATCATaGGGAGGGCTTGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VLWTDTRKTLELERPTCENWQKS*GGLGIF
Trigger: GAAAATCCCAAGCCCTCCCCATGATTTTTGCCAGTT...TTCACAGGTGGGCCTTTCCAGCTCTAGGGTCTTACGGGTGTCGGTCCACAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAATTGTGAGAACCAGGTaGAGAACTGAAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEIVRTR*RTEASH
Trigger: GTGGGAGGCTTCAGTTCTCCACCTGGTTCTCACAAT...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCATGATGCTTTCCTCCTaGAACTCACACCCTTGCATA +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGMMLSS*NSHPCI
Trigger: TATGCAAGGGTGTGAGTTCCAGGAGGAAAGCATCAT...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATCTGGGGTTCCTAAGCTaGAAGCGGGCTTTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDLGFLS*KRALRH
Trigger: ATGCCTCAAAGCCCGCTTCCAGCTTAGGAACCCCAG...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTAGGAAGGCTAGGAAGTaGCAATGGAGAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAARKARK*QWRNHP
Trigger: TGGATGGTTTCTCCATTGCCACTTCCTAGCCTTCCT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDGCSLS*RWTHPT
Trigger: AGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCC...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAATCACTTGAACATGGCTaGGGATCCTGCAAACAACCC +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKSLEHG*GSCKQP
Trigger: GGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGA...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTCACTTGAACATGGCTaGGGATCCTGCAAACAACCC +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKSLEHG*GSCKQP
Trigger: GGGTTGTTTGCAGGATCCTCAGCCATGTTCAAGTGA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAGGAAGTGAAATGGTGTaGGAACATTCTTACCCCTAT +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESGSEMV*EHSYPY
Trigger: ATAGGGGTAAGAATGTTCTCACACCATTTCACTTCC...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATGGAAGTGAAATGGTGTaGGAACATTCTTACCCCTAT +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDGSEMV*EHSYPY
Trigger: ATAGGGGTAAGAATGTTCTCACACCATTTCACTTCC...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGAGAGGAAGAGGAAGTaGAATGGTGTGAGAACATTC +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHERKRK*NGVRTF
Trigger: GAATGTTCTCACACCATTTCACTTCCTCTTCCTCTC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTCTTCAGCTGAATCCTaGCATCATATCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHSSAES*HHIHTV
Trigger: CACAGTGTGGATATGATGTCAGGATTCAGCTGAAGA...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTTCTTCAGCTGAATCCTaGCATCATATCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLSSAES*HHIHTV
Trigger: CACAGTGTGGATATGATGTCAGGATTCAGCTGAAGA...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCACACTGGTTAGCTTTCTaGAGGGAGTCGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAHWLAF*RESMRF
Trigger: AAACCTCATCGACTCCCTTCAGAAAGCTAACCAGTG...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCTACTTATTAAAATGTaGTCCCCCATCCTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDLLIKM*SPILAN
Trigger: GTTAGCCAGGATGGGGGATCACATTTTAATAAGTAG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGATTTCATTTACTACTaGGAGGACAGTGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWDFIYY*EDSECP
Trigger: GGGGCACTCACTGTCCTCTCAGTAGTAAATGAAATC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCGTAGCAGACATGGCCTaGGTGATTTCATTTACTACT +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCVADMA*VISFTT
Trigger: AGTAGTAAATGAAATCACTCAGGCCATGTCTGCTAC...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTGCTTCCAGGAATCACTaGGATTCACAGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGASRNH*DSQRKE
Trigger: TTCCTTTCTCTGTGAATCTCAGTGATTCCTGGAAGC...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGTCTCAGCCCAGGACTaGCTCTTTTTAACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGVSAQD*LFLTQR
Trigger: CCTTTGAGTTAAAAAGAGTCAGTCCTGGGCTGAGAC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGAAAAGAAAAAGTCTTaGGTGCTGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLEKKKS*VLDKPV
Trigger: CACAGGCTTGTCCAGCACTCAAGACTTTTTCTTTTC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGGGAGGTCAGGAGTTTaGAACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAGRSGV*NQPGQH
Trigger: ATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCCC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAACACACACACATTTATaGTTACAACAGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSTHTHL*LQQQSP
Trigger: TGGGCTCTGCTGTTGTAATCATAAATGTGTGTGTGT...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCAAGGACACCCATGCTaGCATTGTAAACAACTGTAC +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASQGHPC*HCKQLY
Trigger: GTACAGTTGTTTACAATGTCAGCATGGGTGTCCTTG...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATTGGGATTTTCCTCATaGTGGGAGCAGTGGCATGTA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSLGFSS*WEQWHV
Trigger: TACATGCCACTGCTCCCATCATGAGGAAAATCCCAA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGAAAAGGAGGATCTCCTaGTCTGGGCAGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWKRRIS*SGQDPC
Trigger: GCAAGGATCCTGCCCAGATCAGGAGATCCTCCTTTT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCACCCTCAGAAGGGTATaGGATATATATGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGTLRRV*DIYVLL
Trigger: AAGCAGCACATATATATCTCATACCCTTCTGAGGGT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCCTGCCTTGTCTCCACTaGAAAATTATGGGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGLPCLH*KIMGVK
Trigger: TTTGACACCCATAATTTTTCAGTGGAGACAAGGCAG...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAACCCCTGATATGTaGATGTCCCAGCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVTTPDM*MSQQTA
Trigger: CGCAGTCTGCTGGGACATGCACATATCAGGGGTTGT...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAGAGTCGATGAGGTTTTaGAGATCGATATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKESMRF*RSISSR
Trigger: CCGGGACGATATCGATCTGCAAAACCTCATCGACTC...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCGTAGTTATTAAACCATaGATTGGAAGACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIVVIKP*IGRPCW
Trigger: CCAGCAGGGTCTTCCAATGCATGGTTTAATAACTAC...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGAATAGTAGTTACCTCTaGGTAACAGAAGACATACTT +
Preference number: 4 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKNSSYL*VTEDIL
Trigger: AAGTATGTCTTCTGTTACGCAGAGGTAACTACTATT...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAACCTTGAACTCCAAATaGCTGCTGAGGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKTLNSK*LLRLAT
Trigger: TGTGGCAAGCCTCAGCAGGCATTTGGAGTTCAAGGT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCCAAACGTGATATGCTaGTGTCTTCAGGGCACATTA +
Preference number: 4 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLPNVIC*CLQGTL
Trigger: TAATGTGCCCTGAAGACAGCAGCATATCACGTTTGG...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCACTGAGCTGCCTTCCTaGTGTGCCTCGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSTELPS*CASSVP
Trigger: AGGCACTGACGAGGCACAGCAGGAAGGCAGCTCAGT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTTTCAAGAAATTCTACTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGFKKFY*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGTAGAATTTCTTGAA...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTACACAGCTAGACCTTTaGATCATTTCAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAATQLDL*IISGGL
Trigger: CAAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGT...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCTGTGTCACCCAACTTaGCAGCCCAGAGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSLCHPT*QPRDLP
Trigger: TGGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACCTCTGGGGGTTCTGTaGATATATAAGAATAATTAC +
Preference number: 4 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGPLGVL*IYKNNY
Trigger: GTAATTATTCTTATATATGCACAGAACCCCCAGAGG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCCCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGAGGCTGTTGTGGGCTaGTTCTTAAGACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCEAVVG*FLRHSR
Trigger: CCTTGAGTGTCTTAAGAACCAGCCCACAACAGCCTC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCATGTATGTGGGATGCATaGAGGGAGGCTGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPCMWDA*REAAVC
Trigger: ACATACTGCAGCCTCCCTCCATGCATCCCACATACA...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCTGAACGATGAGAAGTaGTCTGAGCTATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHLNDEK*SELWQS
Trigger: ACTTTGCCATAGCTCAGACCACTTCTCATCGTTCAG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAACAGAGTCACATGATATaGCTGAGAACAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEQSHMI*LRTARR
Trigger: CCTTCTGGCTGTTCTCAGCCATATCATGTGACTCTG...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGATCCTGAGAGGGGGTaGACCAGGGTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLDPERG*TRVEEG
Trigger: CCCCTCCTCAACCCTGGTCCACCCCCTCTCAGGATC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGGCAAGTTTTTAGGATaGGAAAGGAAGGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWGKFLG*ERKASD
Trigger: ATCGCTGGCCTTCCTTTCCCATCCTAAAAACTTGCC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHARVDN*DKQLSA
Trigger: AGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGACGTGAAAACGCACTGTaGATCAGTATATTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: PLETTQPASSACCLTHCRRENAL*ISILSN
Trigger: GTTACTTAATATACTGATCCACAGTGCGTTTTCACG...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCTGCTGGATGGACAAGTaGTGGAAGGAAATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFCWMDK*WKEIWN
Trigger: ATTCCAAATTTCCTTCCACCACTTGTCCATCCAGCA...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGTGACCCACCCGCCTTaGCTTCCCAAAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSVTHPP*LPKVLG
Trigger: TCCCAGTACTTTGGGAAGCCAAGGCGGGTGGGTCAC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACACTTCCCTAAACCATaGGGCCTGGGGCACAGACCA +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIHFPKP*GLGHRP
Trigger: TGGTCTGTGCCCCAGGCCCCATGGTTTAGGGAAGTG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCAGCAGCCACAGCCCTaGTTCCTCTCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSQQPQP*FLSVCD
Trigger: GTCACAGACTGAGAGGAACCAGGGCTGTGGCTGCTG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGCTCTGGCACTGGTGTaGAGAGGGCACTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLALALV*RGHWES
Trigger: GCTCTCCCAGTGCCCTCTCCACACCAGTGCCAGAGC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTATGCGCCACAGCACTaGTTCCAGAAGATGATGTTG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWYAPQH*FQKMML
Trigger: CAACATCATCTTCTGGAACCAGTGCTGTGGCGCATA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481124.5
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTATCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLSAPQK*WPAFTA
Trigger: GGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGA...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCGGAAGTGAAATGGTGTaGGAACATTCTTACCCCTAT +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASGSEMV*EHSYPY
Trigger: ATAGGGGTAAGAATGTTCTCACACCATTTCACTTCC...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAAGAGAGGAAGAGGAAGTaGAATGGTGTGAGAACATTC +
Preference number: 4 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAEERKRK*NGVRTF
Trigger: GAATGTTCTCACACCATTTCACTTCCTCTTCCTCTC...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCCACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR TCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCACTGGTTAGCTTTCTaGAGGGAGTCGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCHWLAF*RESMRF
Trigger: AAACCTCATCGACTCCCTTCAGAAAGCTAACCAGTG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGCGGAGACTGCCACGTaGCCGGCTCTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIAETAT*PALILA
Trigger: AGCAAGGATGAGAGCCGGTCACGTGGCAGTCTCCGC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCCCAAGCTGGGCTCCCTaGAGTTGGCAATTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVPSWAP*SWQFHQ
Trigger: TTGATGAAATTGCCAACTTCAGGGAGCCCAGCTTGG...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCAAACTCATTTAATCCTTaGAACAACCTCACAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SESSPPGSHRSPLCLSESNSFNP*NNLTGV
Trigger: TACCCCTGTGAGGTTGTTTCAAGGATTAAATGAGTT...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAACTCATTTAATCCTTaGAACAACCTCACAGGGGTA +
Preference number: 4 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWNSFNP*NNLTGV
Trigger: TACCCCTGTGAGGTTGTTTCAAGGATTAAATGAGTT...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAGACCCGACATTCTGTTaGCTTAGAAGAGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKDPTFC*LRRADV
Trigger: GACATCAGCTCTTCTAAGTCAACAGAATGTCGGGTC...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGGGGGAAATTATATTGTaGGAACCAGGTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWGEIIL*EPGGEL
Trigger: CAGTTCTCCACCTGGTTCTCACAATATAATTTCCCC...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCCAAGATGGTTCCAATaGTGCTTTCCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCPRWFQ*CFPPGT
Trigger: AGTTCCAGGAGGAAAGCATCATTGGAACCATCTTGG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTCATGTCCCAGCAGACTaGGCTGGCACTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIHVPAD*AGTQRP
Trigger: GGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATG...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAATCACCAGAAACAAAATaGCTGGAGCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKSPETK*LELLSS
Trigger: GCTGCTCAGAAGCTCCAGGCATTTTGTTTCTGGTGA...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACCACAAGCCAACTTGTaGGGCTGTGGCCGGCACACA +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLPQANL*GCGRHT
Trigger: TGTGTGCCGGCCACAGCCGCACAAGTTGGCTTGTGG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCAGGTGCACATCACCATaGCCGACTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGRCTSP*PTNFCI
Trigger: AATACAAAAATTAGTCGGGCATGGTGATGTGCACCT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACCTCCTGGAGGATGCTaGATTTCACAGCCGCATGGT +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIPPGGC*ISQPHG
Trigger: ACCATGCGGCTGTGAAATGCAGCATCCTCCAGGAGG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAGCAATGAGCCAAGATTaGACCACTGCGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIAMSQD*TTALQP
Trigger: AGGCTGGAGCGCAGTGGTGCAATCTTGGCTCATTGC...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGTCACAAATTTTACATaGACACCTTTGCCAGTTATG +
Preference number: 4 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPVTNFT*TPLPVM
Trigger: CATAACTGGCAAAGGTGTGCATGTAAAATTTGTGAC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGACTGAAGGAATTCATGTaGCGTCTGTCCCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGLKEFM*RLSLNL
Trigger: CAGATTAAGGGACAGACGGCACATGAATTCCTTCAG...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTCGTTCCACCCCCACTaGTTTCTAAGGAGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLSFHPH*FLRSVN
Trigger: ATTTACACTCCTTAGAAAGCAGTGGGGGTGGAACGA...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCATGGAACTCACACCCTTaGATAGTCACTCTCGCATCT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPWNSHP*IVTLAS
Trigger: AGATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCA...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAATGGAACTCACACCCTTaGATAGTCACTCTCGCATCT +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKWNSHP*IVTLAS
Trigger: AGATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCA...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGGCAGAGAAAGGCTCTaGCCTCCCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIGRERL*PPSVAQ
Trigger: CTGAGCCACGCTGGGAGGCCAGAGCCTTTCTCTGCC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCAGAGTCACATGATATaGCTGAGAACAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGQSHMI*LRTARR
Trigger: CCTTCTGGCTGTTCTCAGCCATATCATGTGACTCTG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGTGCCAGGCTTCTTGTaGACCATGCAGATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKVPGFL*TMQMVF
Trigger: AAAAACCATCTGCATGGTCCACAAGAAGCCTGGCAC...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCATTGGAAGACCCTGCTaGAATATAAGATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASIGRPC*NIRCRA
Trigger: TGCTCTGCATCTTATATTCCAGCAGGGTCTTCCAAT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAAGGCCCATCTGTTCTTaGCACACTCCTACAACTGAT +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKRPICS*HTPTTD
Trigger: ATCAGTTGTAGGAGTGTGCCAAGAACAGATGGGCCT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAACCTGCAACTGTAAATaGACTCCTCTGGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQTCNCK*TPLVQR
Trigger: CCTTTGTACCAGAGGAGTCCATTTACAGTTGCAGGT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACATTTCACAGCCGCATaGTTTCAGTGGGATAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSHFTAA*FQWDKA
Trigger: TGCTTTATCCCACTGAAACCATGCGGCTGTGAAATG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCACAACTTTGGTTGTGTTaGTTTCTGGTAGCATCTGCG +
Preference number: 4 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAQLWLC*FLVASA
Trigger: CGCAGATGCTACCAGAAACCAACACAACCAAAGTTG...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTGCTGGATGGACAAGTaGTGGAAGGAAATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSCWMDK*WKEIWN
Trigger: ATTCCAAATTTCCTTCCACCACTTGTCCATCCAGCA...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAACTGATGCACTTGAGTaGCAGAGACTTGGGACTAAA +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGTDALE*QRLGTK
Trigger: TTTAGTCCCAAGTCTCTGCCACTCAAGTGCATCAGT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp AGGGAAGTGGACCGTTTCGTTTCAGTGATTCAAAGCTaGAGCTATCTGACATGTGACCCAGGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: REVDRFVSVIQS*SYLTCDPGSSL
Trigger: GAGAGAGCTGCCTGGGTCACATGTCAGATAGCTCAAGCTTTGAATCACTGAAACGAAACGGTCCACTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTATCCTGCAGACATGCTTaGGCTGCAGGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLSCRHA*AAGGLS
Trigger: ACTCAGACCCCCTGCAGCTCAAGCATGTCTGCAGGA...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCACACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTCTGAAGGGAGTCGATaGGGTTTTGCAGATCGATAT +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKSEGSR*GFADRY
Trigger: ATATCGATCTGCAAAACCTCATCGACTCCCTTCAGA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp CATGGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: HGGWCKGRGTDSPDKKLPRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...AGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCCCTTTAATGCAGCCTTaGACAGGAATTGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAPLMQP*TGIGQA
Trigger: GGCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGG...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCAGGCAGAGGTTGCAATaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSRQRLQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCATTGCAACCTCTGCCT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCACAGTAGATTTTCTATaGGGACCTCTCACTGATGCA +
Preference number: 4 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLTVDFL*GPLTDA
Trigger: TGCATCAGTGAGAGGTCCTCATAGAAAATCTACTGT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGACTATCCCATTTTGCTaGGGAAATGGTACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKTIPFC*GNGTQF
Trigger: GAACTGGGTACCATTTCCTCAGCAAAATGGGATAGT...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCACAGCAGATGACAGTGTaGGTTCTGCTTCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAQQMTV*VLLLNL
Trigger: CAGATTAAGAAGCAGAACTCACACTGTCATCTGCTG...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCACAAGGACACCCATGCTaGCATTGTAAACAACTGTAC +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPQGHPC*HCKQLY
Trigger: GTACAGTTGTTTACAATGTCAGCATGGGTGTCCTTG...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGAATCTGAAGTCCATATaGCCAATGATGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKNLKSI*PMMARQ
Trigger: CTGTCTGGCCATCATTGGTCATATGGACTTCAGATT...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAACCGGCTCTCATCCTTaGTTTCTTTCCATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPTGSHP*FLSIPH
Trigger: ATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGT...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCACCGGCTCTCATCCTTaGTTTCTTTCCATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGTGSHP*FLSIPH
Trigger: ATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGT...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAACCGGCTCTCATCCTTaGTTTCTTTCCATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWATGSHP*FLSIPH
Trigger: ATGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGT...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGAATTGGCCAAGCCTTaGCAACTTGATAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAELAKP*QLDKEQ
Trigger: TTGCTCCTTATCAAGTTGGCAAGGCTTGGCCAATTC...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGAATAGTAGTTACCTCTaGGTAACAGAAGACATACTT +
Preference number: 4 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGNSSYL*VTEDIL
Trigger: AAGTATGTCTTCTGTTACGCAGAGGTAACTACTATT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGGGTTTTCTATTACCTaGAACTGTAAATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHGFSIT*NCKWTP
Trigger: AGGAGTCCATTTACAGTTGCAGGTAATAGAAAACCC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAAATAGAACTATGCATTaGTTAGGGTGCACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSNRTMH*LGCTLP
Trigger: TGGAAGGGTGCACCCTAAGCAATGCATAGTTCTATT...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGTTTTACATCTCTaGATCAGGAAAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: QTTPDMCMSQQTALALRGPVLHL*IRKKNR
Trigger: ACGATTCTTTTTCCTGATGCAGAGATGTAAAACTGG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCCAGAGTCACATGATATaGCTGAGAACAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVQSHMI*LRTARR
Trigger: CCTTCTGGCTGTTCTCAGCCATATCATGTGACTCTG...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATATGTGGACCATGCAGATaGTTTTTCAGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISICGPCR*FFSPAH
Trigger: GTGGGCTGGGCTGAAAAACCATCTGCATGGTCCACA...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGCCTTGAACAGGAATTaGCCAAGCCTTGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAALNRN*PSLANL
Trigger: CAAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACCGTGAAAACGCACTGTaGATCAGTATATTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNRENAL*ISILSN
Trigger: GTTACTTAATATACTGATCCACAGTGCGTTTTCACG...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAACCTGCAACTGTAAATaGACTCCTCTGGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKTCNCK*TPLVQR
Trigger: CCTTTGTACCAGAGGAGTCCATTTACAGTTGCAGGT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATGGAAGGCAGAGAAATaGAAACAAGATCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQWKAEK*KQDPVD
Trigger: GTCAACAGGATCTTGTTTCCATTTCTCTGCCTTCCA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGCTCTCTCGTAGGGACTaGCAGCCACAGATAAAATTC +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWLSRRD*QPQIKF
Trigger: GAATTTTATCTGTGGCTGCCAGTCCCTACGAGAGAG...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAAGTAGTCATGTCCTCTaGGGGTTCTGTGCATATATA +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQSSHVL*GFCAYI
Trigger: TATATATGCACAGAACCCCCAGAGGACATGACTACT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCATCTGATAACTCACTCTaGGGGAAATTATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSSDNSL*GKLYCE
Trigger: CTCACAATATAATTTCCCCCAGAGTGAGTTATCAGA...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp AATGGAAACAAGATCCTGTTGACGTCACTGAGCCACTaGGATCAACCCAAACCTGAAACTCACCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: NGNKILLTSLSH*DQPKPETHPTL
Trigger: CAAGGTGGGGTGAGTTTCAGGTTTGGGTTGATCCAAGTGGCTCAGTGACGTCAACAGGATCTTGTTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CAGTCCCTCCTAGAGGCCACTTCACTTCTTCCCATATaGGCTCACAGCTGTGACTTTAAAACACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: QSLLEATSLLPI*AHSCDFKTQNE
Trigger: CTCGTTCTGTGTTTTAAAGTCACAGCTGTGAGCCAATATGGGAAGAAGTGAAGTGGCCTCTAGGAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGCTCCAGGAAGAAGATaGGCACGATGGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLAPGRR*ARWCHR
Trigger: TCTGTGGCACCATCGTGCTCATCTTCTTCCTGGAGC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAAGAAGGGTCTATAGTTaGAAGATAAACCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQRRVYS*KINPTL
Trigger: CAGAGTTGGGTTTATCTTTCAACTATAGACCCTTCT...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATATTAGCATGTGCATGGTaGGGTGAGAAGAGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISILACAW*GEKRVQ
Trigger: TTGCACCCTCTTCTCACCTCACCATGCACATGCTAA...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGATGGGTGTGATGACCTaGGTAGATGCATGGACATTT +
Preference number: 4 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWMGVMT*VDAWTF
Trigger: AAATGTCCATGCATCTACTCAGGTCATCACACCCAT...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCACAGACATGGCCTGAGTaGTTTCATTTACTACTGAGA +
Preference number: 4 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPQTWPE*FHLLLR
Trigger: TCTCAGTAGTAAATGAAATCACTCAGGCCATGTCTG...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGATAGTACCCTCAGCTaGGATGGGAATAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLDSTLS*DGNRGQ
Trigger: CTGCCCCCTATTCCCATCTCAGCTGAGGGTACTATC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAACTGGTCTCGAACTCCTaGCCTCAGGTGACCCACCCG +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKLVSNS*PQVTHP
Trigger: CGGGTGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAAAATCTGGAGGGCACTaGAGGAATTCATGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIKSGGH*RNSCAV
Trigger: GACGGCACATGAATTCCTTCAGTGCCCTCCAGATTT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGTTCCTCTCAGTCTGTaGCCCTCCCACATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIVPLSL*PSHILP
Trigger: GGGAAGGATGTGGGAGGGTCACAGACTGAGAGGAAC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAACACACTGGCGGTGGTaGGGCTCCTTCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKTHWRW*GSFQQP
Trigger: TGGCTGCTGGAAGGAGCCTCACCACCGCCAGTGTGT...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGGGAGGTCAGGAGTTTaGAACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLGRSGV*NQPGQH
Trigger: ATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCCC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTGCCTTGTCTCCACTaGAAAATTATGGGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGLPCLH*KIMGVK
Trigger: TTTGACACCCATAATTTTTCAGTGGAGACAAGGCAG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAACACCCTCTCTGCTCTaGTGGGAGCCTTCCAACACT +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLTPSLL*WEPSNT
Trigger: AGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGT...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAGTAGTTATTAAACCATaGATTGGAAGACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKVVIKP*IGRPCW
Trigger: CCAGCAGGGTCTTCCAATGCATGGTTTAATAACTAC...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGATGACCTGAGTAGATaGATGGACATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCDDLSR*MDIFRK
Trigger: CTTCCTGAAAATGTCCATGCATCTACTCAGGTCATC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAATAGAACTATGCATTaGTTAGGGTGCACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGNRTMH*LGCTLP
Trigger: TGGAAGGGTGCACCCTAAGCAATGCATAGTTCTATT...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTAGACCCAAGAGCTACTaGTCAGCCTACCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIRPKSY*SAYPSP
Trigger: TGGGGAGGGGTAGGCTGAGCAGTAGCTCTTGGGTCT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTTTCCATAAAAGAGTTTaGCAGTCAAAGAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAAFHKRV*QSKRSI
Trigger: GATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGGCAAGTTTTTAGGATaGGAAAGGAAGGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAGKFLG*ERKASD
Trigger: ATCGCTGGCCTTCCTTTCCCATCCTAAAAACTTGCC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGTGGGGCATGGTGGGTaGTGCAAAGGAAGGGGTACA +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIVGHGG*CKGRGT
Trigger: TGTACCCCTTCCTTTGCACCACCCACCATGCCCCAC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDARVDN*DKQLSA
Trigger: AGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGC...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGAGAACTGGCGAGCCTaGGCCTCTGAAGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIENWRA*ASEAEK
Trigger: CTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAATTGGAAGACCCTGCTaGAATATAAGATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HILCLWVDSRGMQSQVWAIGRPC*NIRCRA
Trigger: TGCTCTGCATCTTATATTCCAGCAGGGTCTTCCAAT...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAATTTCTCTTTTGAACTaGCTGTTAATCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSISLLN*LLILAA
Trigger: TGCTGCTAAGATTAACAGCCAGTTCAAAAGAGAAAT...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCATTTCTCTTTTGAACTaGCTGTTAATCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCISLLN*LLILAA
Trigger: TGCTGCTAAGATTAACAGCCAGTTCAAAAGAGAAAT...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTCTGAGACTGCTGGCTaGGAAGCCATCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFISETAG*EAIRWV
Trigger: AACCCACCTGATGGCTTCTCAGCCAGCAGTCTCAGA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAGCGGAGACCTTCCCATaGCAGCAGGATGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKAETFP*QQDASG
Trigger: ACCTGAGGCATCCTGCTGTCATGGGAAGGTCTCCGC...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGCTTCCAGGAATCACTaGGATTCACAGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAASRNH*DSQRKE
Trigger: TTCCTTTCTCTGTGAATCTCAGTGATTCCTGGAAGC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATACAGTAGATTTTCTATaGGGACCTCTCACTGATGCA +
Preference number: 4 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDTVDFL*GPLTDA
Trigger: TGCATCAGTGAGAGGTCCTCATAGAAAATCTACTGT...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCACTATCCCATTTTGCTaGGGAAATGGTACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQATIPFC*GNGTQF
Trigger: GAACTGGGTACCATTTCCTCAGCAAAATGGGATAGT...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGGGTTTTCTATTACCTaGAACTGTAAATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCGFSIT*NCKWTP
Trigger: AGGAGTCCATTTACAGTTGCAGGTAATAGAAAACCC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCCCAAACGTGATATGCTaGTGTCTTCAGGGCACATTA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAPNVIC*CLQGTL
Trigger: TAATGTGCCCTGAAGACAGCAGCATATCACGTTTGG...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTCCCAAAGCAGATGTCTaGATGCCAGTGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIPKADV*MPVERG
Trigger: TCCCCTCTCCACTGGCATCCAGACATCTGCTTTGGG...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACACCAACAGTTTCAGGCTaGCCATCTTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTPTVSG*PSWAGA
Trigger: AGCCCCAGCCCAAGATGGCCAGCCTGAAACTGTTGG...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTTTCCATAAAAGAGTTTaGCAGTCAAAGAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPFHKRV*QSKRSI
Trigger: GATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTATCCCTTGGTTCCTCTaGCAGCCGCGTTTACCACTG +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIIPWFL*QPRLPL
Trigger: CAGTGGTAAACGCGGCTGCCAGAGGAACCAAGGGAT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTACATACCCTATCCCTTaGTTCCTCTGGCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFITYPIP*FLWQPR
Trigger: ACGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAACTGCCACCTCCCCAGTaGCCTCTGCATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKLPPPQ*PLHGIS
Trigger: GGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACAAAGTTCAGCGGTTTaGGATGCAGCCACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLQSSAV*DAATEV
Trigger: CACCTCAGTGGCTGCATCCCAAACCGCTGAACTTTG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCTGTGCCACAGGGCTTTaGTCCACATTAGATAGACAA +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQACATGL*STLDRQ
Trigger: TTGTCTATCTAATGTGGACCAAAGCCCTGTGGCACA...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAATTCTAACAGATTACTaGTTGCACACTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGILTDY*LHTLSD
Trigger: ATCAGAGAGAGTGTGCAACCAGTAATCTGTTAGAAT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCTCTGAAGGGAGTCGATaGGGTTTTGCAGATCGATAT +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSSEGSR*GFADRY
Trigger: ATATCGATCTGCAAAACCTCATCGACTCCCTTCAGA...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTATGTGCATGGTGAGGTaGGAAGAGGGTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIMCMVR*EEGANA
Trigger: GGCATTTGCACCCTCTTCTCACCTCACCATGCACAT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTCGTCTATGTTCCTCTaGGACTGCTGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFISSMFL*DCWLRS
Trigger: GCTTCTCAGCCAGCAGTCTCAGAGGAACATAGACGA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTAGGCAGAGGTTGCAATaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIRQRLQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCATTGCAACCTCTGCCT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCAGCAGATGACAGTGTaGGTTCTGCTTCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSQQMTV*VLLLNL
Trigger: CAGATTAAGAAGCAGAACTCACACTGTCATCTGCTG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTGCTTGTATGTGGGATaGATGGAGGGAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFICLYVG*MEGGCS
Trigger: ACTGCAGCCTCCCTCCATGCATCCCACATACAAGCA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGTGTTCACAACTTTTTaGGCAGGATCTGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLVFTTF*AGSGTQ
Trigger: CTGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACAC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR GCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAACACCCTCTCTGCTCTaGTGGGAGCCTTCCAACACT +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTTPSLL*WEPSNT
Trigger: AGTGTTGGAAGGCTCCCAGCAGAGCAGAGAGGGTGT...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTCCAGTTTTACATCTCTaGATCAGGAAAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCPVLHL*IRKKNR
Trigger: ACGATTCTTTTTCCTGATGCAGAGATGTAAAACTGG...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAGGTCGGCTCCAGCCATaGACACTATCTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTGRLQP*TLSKAA
Trigger: AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACC...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGCCAGAGTTGACAATTaGGATAAGCAGCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSARVDN*DKQLSA
Trigger: AGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTGTTCTCCTTATGAGTaGGACCAGATGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFICSPYE*DQMGST
Trigger: GGTGGACCCCATCTGGTCCCACTCATAAGGAGAACA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAGGTCTCCTGGGTAGCTaGGATTACAGGCGCCCACAA +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKGLLGS*DYRRPQ
Trigger: TTGTGGGCGCCTGTAATCCCAGCTACCCAGGAGACC...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp ATTAGCCAGGATGGTGAACATGCCTTTAATGCAGCCTaGAACAGGAATTGGCCAAGCCTTGCCAACTTGATA +
Preference number: 4 (lower is better)
Translates to: ISQDGEHAFNAA*NRNWPSLANLI
Trigger: TATCAAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGGCATGTTCACCATCCTGGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACATGGTGCTACAGAGGCTaGAGAAGGCCAGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTWCYRG*RRPELT
Trigger: TGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCA...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCGTAGTTATTAAACCATaGATTGGAAGACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSVVIKP*IGRPCW
Trigger: CCAGCAGGGTCTTCCAATGCATGGTTTAATAACTAC...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAATGCCTGCTGAGGCTTaGCACAGACCTCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKMPAEA*HRPRSL
Trigger: AAGGCTTCGAGGTCTGTGGCAAGCCTCAGCAGGCAT...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGTTTCTGGTAGCATCTaGGCTCCAGGCAAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIVSGSI*APGKKQ
Trigger: TTGCTTCTTGCCTGGAGCGCAGATGCTACCAGAAAC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTGGTTGTGGCCCACCTTaGCCCAAATCTCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIGCGPP*PKSHQN
Trigger: GTTTTGATGAGATTTGGGGCAAGGTGGGCCACAACC...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTACACTTGCTCTTCAGCTaGATCCTGACATCATATCCA +
Preference number: 4 (lower is better)
Translates to: STATSIHHTRMYTPASKLHLLFS*ILTSYP
Trigger: TGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTG...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTCTAGACCTATGGAGTTaGAGTTTCTCCAGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SPREIPRSRKVVHPLIFILDLWS*SFSSSH
Trigger: GTGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAG...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCTTCCATAAAAGAGTTTaGCAGTCAAAGAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAFHKRV*QSKRSI
Trigger: GATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACATTTCCTGAGGCACCCTaGAGACGCCAAAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTFPEAP*RRQKHL
Trigger: CAAATGCTTTTGGCGTCTCCAGGGTGCCTCAGGAAA...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
3UTR CAA 72 bp TTTACATGCACACCTTTGCCAGTTATGAGAATTGTGTaGCAAAGAGGAAGGAGTGGAGAGTTTACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: FTCTPLPVMRIV*QRGRSGEFTSQ
Trigger: TTGGCTGGTAAACTCTCCACTCCTTCCTCTTTGCAACACAATTCTCATAACTGGCAAAGGTGTGCATGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp GGAACACACCACACTGACACTCAGAAAGATGCCATATaGTCAGATGTGCCATTTATCTGTGTATTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GTHHTDTQKDAI*SDVPFICVLAS
Trigger: ACTGGCTAATACACAGATAAATGGCACATCTGACAATATGGCATCTTTCTGAGTGTCAGTGTGGTGTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACACACTGGTTAGCTTTCTaGAGGGAGTCGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTHWLAF*RESMRF
Trigger: AAACCTCATCGACTCCCTTCAGAAAGCTAACCAGTG...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAGCACACAAGGGCAACTaGAAGTGCTGCCATACAGAA +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKAHKGN*KCCHTE
Trigger: TTCTGTATGGCAGCACTTTCAGTTGCCCTTGTGTGC...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR GCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAGGTTGTGGCCCACCTTaGCCCAAATCTCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKGCGPP*PKSHQN
Trigger: GTTTTGATGAGATTTGGGGCAAGGTGGGCCACAACC...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR GCA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACCTCTGGGGGTTCTGTaGATATATAAGAATAATTAC +
Preference number: 4 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIPLGVL*IYKNNY
Trigger: GTAATTATTCTTATATATGCACAGAACCCCCAGAGG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCATTCTAACAGATTACTaGTTGCACACTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSILTDY*LHTLSD
Trigger: ATCAGAGAGAGTGTGCAACCAGTAATCTGTTAGAAT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAGGGGAAATTATATTGTaGGAACCAGGTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTGEIIL*EPGGEL
Trigger: CAGTTCTCCACCTGGTTCTCACAATATAATTTCCCC...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAAAACTCACCCCACCTTaGGACTTTCCAGTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTKLTPP*DFPVSR
Trigger: TCTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTT...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAGGAAGTGAAATGGTGTaGGAACATTCTTACCCCTAT +
Preference number: 4 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTGSEMV*EHSYPY
Trigger: ATAGGGGTAAGAATGTTCTCACACCATTTCACTTCC...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAATCTTCAGCTGAATCCTaGCATCATATCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKSSAES*HHIHTV
Trigger: CACAGTGTGGATATGATGTCAGGATTCAGCTGAAGA...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAGAAAAGAAAAAGTCTTaGGTGCTGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKEKKKS*VLDKPV
Trigger: CACAGGCTTGTCCAGCACTCAAGACTTTTTCTTTTC...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR TCA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAATCTGAAGTCCATATaGCCAATGATGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKNLKSI*PMMARQ
Trigger: CTGTCTGGCCATCATTGGTCATATGGACTTCAGATT...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
3UTR CAA 72 bp CTCCATACAGATTTATGGTTCATTGTGATTTCTCTTTaGAACTGGCTGTTAATCTTAGCAGCACTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LHTDLWFIVISL*NWLLILAALSI
Trigger: AATTGAGAGTGCTGCTAAGATTAACAGCCAGTTCAAAAGAGAAATCACAATGAACCATAAATCTGTATGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTAGCTGCAGCCTGGGGTaGTGGCTAGGCACGGGGTGT +
Preference number: 5 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFSCSLG*WLGTGC
Trigger: ACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCT...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTAGCTGCAGCCTGGGGTaGTGGCTAGGCACGGGGTGT +
Preference number: 5 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLSCSLG*WLGTGC
Trigger: ACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCT...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGTGCCTGCCTACATCGTaGCTCATTGATCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRCLPTS*LIDHGL
Trigger: CAGGCCATGATCAATGAGCAACGATGTAGGCAGGCA...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCAGCAGAGCCCAGGCTaGCAGCCAACCGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVQQSPG*QPTGPV
Trigger: CACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCTG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS CCA 90 bp GCAGGATTGGAAAGATCTGGGGCCGAAAGAGGAGGGCCGGGCACGTaGGGGGTGGGTGGCCTCGGGTACAGCTGGACTTGCCTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: AGLERSGAERGGPGT*GVGGLGYSWTCLPN
Trigger: ATTGGGCAGGCAAGTCCAGCTGTACCCGAGGCCACCCACCCCCCACGTGCCCGGCCCTCCTCTTTCGGCCCCAGATCTTTCCAATCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp GGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTCTCTCACTGATGCACTaGAGTGGCAGAGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: GPAGPRPPPVTGRPPCCFLSLMH*SGRDLG
Trigger: TCCCAAGTCTCTGCCACTCAAGTGCATCAGTGAGAG...AAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCAGCAGAGCCCAGGCTaGCAGCCAACCGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: QVPWYPLETTQPASSACCQQSPG*QPTGPV
Trigger: CACAGGTCCGGTTGGCTGCAAGCCTGGGCTCTGCTG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS CCA 90 bp GGTGGGTGGCCTCGGGTACAGCTGGACTTGCCTGCCCAATCCCAATaGGAAAGGGCTGGCCCACCAGGCAACCACAAGCCGGCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: GGWPRVQLDLPAQSQ*ERAGPPGNHKPAKW
Trigger: CCACTTTGCCGGCTTGTGGTTGCCTGGTGGGCCAGCCCTTTCCCATTGGGATTGGGCAGGCAAGTCCAGCTGTACCCGAGGCCACCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp GCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGTCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: ALALRGPAGPRPPPVTGRSGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...CCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: TQRPSGATSASRYGQAPMLKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACTCAGAGGCCCAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGGACCGGCTCTCATCCTaGCTTTCTTTCCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: TQRPSGATSASRYGQAPMDRLSS*LSFHSS
Trigger: TGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTC...CATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTGGGCCTCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS GCA 90 bp GATGCTCGTCAGCTCCTCTCAGCCTCTGCCCCTCGCTGGGCACTGTaGCATCGCACCACCTGTCTGACCAAAGGCTCCCTGGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: DARQLLSASAPRWAL*HRTTCLTKGSLAVS
Trigger: GGAAACAGCCAGGGAGCCTTTGGTCAGACAGGTGGTGCGATGGCACAGTGCCCAGCGAGGGGCAGAGGCTGAGAGGAGCTGACGAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS-3UTR CAA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSCIRVT*VRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCA...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCCCGGGCAACTTTGGTaGTGTTGGTTTCTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: CMSQQTALALRGPAGPRPPGQLW*CWFLVA
Trigger: TGCTACCAGAAACCAACACAACCAAAGTTGCCCGGG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTGGGTGTAGCCTGGGCTaGCATACCTCCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TQGDSGQGTPVAPVHALAGCSLG*HTSKDR
Trigger: CCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACCC...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACGGGTGTAGCCTGGGCTaGCATACCTCCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDGCSLG*HTSKDR
Trigger: CCTGTCCTTGGAGGTATGCAAGCCCAGGCTACACCC...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCACGCCCCAGGCTCTaGTTTTCAGCTGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDPRPRL*FSAGQS
Trigger: GGACTGTCCAGCTGAAAACAAGAGCCTGGGGCGTGG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGAGTCATGGAGTGAGGTaGGAAGGGATCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMSHGVR*EGILQP
Trigger: GGGCTGGAGGATCCCTTCCAACCTCACTCCATGACT...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS GCA 90 bp GAGGTGGAGTGGCTTGTTCCACGGCCTCCCTGCTGTCTGCCAAGCTaGAGGCAGACAACCCACAGAGAAGGCCTGATGCCCCTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: EVEWLVPRPPCCLPS*RQTTHREGLMPLLD
Trigger: GTCTAGCAGGGGCATCAGGCCTTCTCTGTGGGTTGTCTGCCTGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 90 bp CCAGGCAACCACAAGCCGGCAAAGTGGAACAGACCAGAGGTGGAGTaGCTTGTTCCACGGCCTCCCTGCTGTCTGCCAAGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGNHKPAKWNRPEVE*LVPRPPCCLPSCRQ
Trigger: CTGCCTGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 90 bp GCCCACCAGGCAACCACAAGCCGGCAAAGTGGAACAGACCAGAGGTaGAGTGGCTTGTTCCACGGCCTCCCTGCTGTCTGCCAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: AHQATTSRQSGTDQR*SGLFHGLPAVCQAA
Trigger: TGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGCCTGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 90 bp CAATGGGAAAGGGCTGGCCCACCAGGCAACCACAAGCCGGCAAAGTaGAACAGACCAGAGGTGGAGTGGCTTGTTCCACGGCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QWERAGPPGNHKPAK*NRPEVEWLVPRPPC
Trigger: GCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGCCTGGTGGGCCAGCCCTTTCCCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGCTGAGATCAGCGTCCTaGCCAGGAAGATGCCAAATA +
Preference number: 5 (lower is better)
Translates to: CMSQQTALALRGPAGPRPLRSAS*PGRCQI
Trigger: TATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAG...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGGCCTTTAATGCAGCCTaGAACAGGAATTGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: CMSQQTALALRGPAGPRPAFNAA*NRNWPS
Trigger: GCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGGC...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAGGAACTGAGCCAGCCTaGCCAGTGGGAGCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: PLETTQPASSACCLTHCRGTEPA*PVGAKQ
Trigger: CTGCTTGGCTCCCACTGGCAAGGCTGGCTCAGTTCC...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS TCA 90 bp CCCAGCGTGGCTCAGCTCGGCTCCCTCAACTCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCCTCGATGTCTGAGATCAGCGTCCTT +
Preference number: 5 (lower is better)
Translates to: PSVAQLGSLNSAPQK*WPAFTASMSEISVL
Trigger: AAGGACGCTGATCTCAGACATCGAGGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCGAGCTGAGCCACGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265450.5
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS CCA 90 bp CCTGATCCCCTAGTGAGCTCTGGTAAGGAGCAGGGCAAAGCAGGGTaGGAACGAGGGATCCAGGAGGCAGGCAAGGAGGACTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PDPLVSSGKEQGKAG*ERGIQEAGKEDSPG
Trigger: TCCTGGAGAGTCCTCCTTGCCTGCCTCCTGGATCCCTCGTTCCCACCCTGCTTTGCCCTGCTCCTTACCAGAGCTCACTAGGGGATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS-3UTR CAA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCAGCTGCAGCCTGGGGTaGTGGCTAGGCACGGGGTGT +
Preference number: 5 (lower is better)
Translates to: EQPQKSPDRKGGPVITDISCSLG*WLGTGC
Trigger: ACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCT...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp GCTGCAGGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCGGAGTCGATGAGGTTTaGCAGATCGATATCGTCCCG +
Preference number: 5 (lower is better)
Translates to: AAGGLSQALLAATGALSVGVDEV*QIDIVP
Trigger: CGGGACGATATCGATCTGCAAAACCTCATCGACTCC...GACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGGAAAGAGAACAGACCTaGAACTCCAAATGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CMSQQTALALRGPAGPRPEREQT*NSKCLL
Trigger: CAGCAGGCATTTGGAGTTCAAGGTCTGTTCTCTTTC...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCAGCGGGGCCACGTCCGGCAACTTTGGTTGTGTaGGTTTCTGGTAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: CMSQQTALALRGPAGPRPATLVV*VSGSIC
Trigger: GCAGATGCTACCAGAAACCAACACAACCAAAGTTGC...CGGACGTGGCCCCGCTGGGCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCCTCCCTGTGAGAAGTaGCTGACAGTGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVPPCEK*LTVKER
Trigger: CCTTTCCTTCACTGTCAGCAACTTCTCACAGGGAGG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCCATACAACCCAAGGTaGTGGCCCACCTTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKPYNPR*WPTLPQ
Trigger: TTGGGGCAAGGTGGGCCACAACCTTGGGTTGTATGG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCACACAGGCCAGGAAATaGGGGTTTCTGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSTQARK*GFLSCR
Trigger: TCTGCAGCTCAGAAACCCCAATTTCCTGGCCTGTGT...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS TCA 90 bp CAGCCTCTGCCCCTCGCTGGGCACTGTGCCATCGCACCACCTGTCTaGCCAAAGGCTCCCTGGCTGTTTCCTTTCAGGTCTCCAGAGATT +
Preference number: 5 (lower is better)
Translates to: QPLPLAGHCAIAPPV*PKAPWLFPFRSPEI
Trigger: AATCTCTGGAGACCTGAAAGGAAACAGCCAGGGAGCCTTTGGTCAGACAGGTGGTGCGATGGCACAGTGCCCAGCGAGGGGCAGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS GCA 90 bp ATCACCACGCCCACCATCAGGACCAGCACCACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTGAGGTCGGACAGCACACCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ITTPTIRTSTTGSIP*IRVTLVRSDSTPQK
Trigger: CTTCTGGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCTGGTCCTGATGGTGGGCGTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372164.7
ENST00000616406.1
CDS GCA 90 bp AAGTGGAACAGACCAGAGGTGGAGTGGCTTGTTCCACGGCCTCCCTaGTGTCTGCCAAGCTGCAGGCAGACAACCCACAGAGAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: KWNRPEVEWLVPRPP*CLPSCRQTTHREGL
Trigger: CAGGCCTTCTCTGTGGGTTGTCTGCCTGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 90 bp AGCTCCAGGCAGCACAGGGAGGTGCATGCTCTATCGGGGGCCCGCTaGGGAGGTGCTTACAGCTTTCTGAAGGGAGTCGATGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSRQHREVHALSGAR*GGAYSFLKGVDEVL
Trigger: CAAAACCTCATCGACTCCCTTCAGAAAGCTGTAAGCACCTCCCCAGCGGGCCCCCGATAGAGCATGCACCTCCCTGTGCTGCCTGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 90 bp TCGGGTACAGCTGGACTTGCCTGCCCAATCCCAATGGGAAAGGGCTaGCCCACCAGGCAACCACAAGCCGGCAAAGTGGAACAGACCAGA +
Preference number: 5 (lower is better)
Translates to: SGTAGLACPIPMGKG*PTRQPQAGKVEQTR
Trigger: TCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGCCTGGTGGGCCAGCCCTTTCCCATTGGGATTGGGCAGGCAAGTCCAGCTGTACCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp ACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCAAAGCCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: TPVGPSTHGPPTDVDDPKPMLLC*MERDAL
Trigger: CAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGG...CTTTGGGTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAGGCACGGGGTGTGGTaGCAGAAGAACGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTRHGVW*QKNGCL
Trigger: GAGACAGCCGTTCTTCTGCAACCACACCCCGTGCCT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAAGGCACGGGGTGTGGTaGCAGAAGAACGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPRHGVW*QKNGCL
Trigger: GAGACAGCCGTTCTTCTGCAACCACACCCCGTGCCT...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp CAGCGGGGCCACGTCCGCCTCCCGTTACGGGCAGGCCCCCATGCTGCTTTGCTTGCAAGTAAATTAAGGTaGCAGTCCATCCCTGAACGA +
Preference number: 5 (lower is better)
Translates to: QRGHVRLPLRAGPHAALLASKLR*QSIPER
Trigger: TCGTTCAGGGATGGACTGCAACCTTAATTTACTTGC...AAGCAAAGCAGCATGGGGGCCTGCCCGTAACGGGAGGCGGACGTGGCCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGATACATACCCTATCCCTaGGTTCCTCTGGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRYIPYP*VPLAAA
Trigger: CGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTA...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGKPQAN*CGCGRH
Trigger: GTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp CCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGGACCGGCTCTCATCCTaGCTTTCTTTCCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: PCPRLWVPLPTAHPQMWMDRLSS*LSFHSS
Trigger: TGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTC...CATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGAAACTCACCCCACCTaGGGACTTTCCAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVETHPT*GLSSFK
Trigger: CTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTTC...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTGGACCAGCGGGTGACAGGCTGATGCATCTGACATTTGGGCGGAGACCTTCCCTGGCCCCTTGGCAGTaGATGGCCACTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SGPAGDRLMHLTFGRRPSLAPWQ*MATLLL
Trigger: AAGCAGCAGAGTGGCCATCAACTGCCAAGGGGCCAG...GGAAGGTCTCCGCCCAAATGTCAGATGCATCAGCCTGTCACCCGCTGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GATGCCCTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGCTGACAGCTGAGTGCTaGGGCCTAAATCAGCATCTA +
Preference number: 5 (lower is better)
Translates to: DALSTPVGPSTHGPPTDVLTAEC*GLNQHL
Trigger: TAGATGCTGATTTAGGCCCAAGCACTCAGCTGTCAG...CACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAGGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAGGTCCCCTGGTACCCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTCTCACTGATGCACTaGAGTGGCAGAGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: QVPWYPLETTQPASSACCLSLMH*SGRDLG
Trigger: TCCCAAGTCTCTGCCACTCAAGTGCATCAGTGAGAG...GCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGGGTACCAGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCAGCCATCCACCTCCTaGTTGGACATAGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDQPSTS*LDIGSI
Trigger: AATGGAGCCTATGTCCAACAAGGAGGTGGATGGCTG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCCCTGTGTCACCCAACTaGCCAGCCCAGAGACCTCCC +
Preference number: 5 (lower is better)
Translates to: QTTPDMCMSQQTALALRGPVSPN*PAQRPP
Trigger: GGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAGG...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCCCTGTGTCACCCAACTaGCCAGCCCAGAGACCTCCC +
Preference number: 5 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAPVSPN*PAQRPP
Trigger: GGGAGGTCTCTGGGCTGGCAAGTTGGGTGACACAGG...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACCATACAACCCAAGGTaGTGGCCCACCTTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGPYNPR*WPTLPQ
Trigger: TTGGGGCAAGGTGGGCCACAACCTTGGGTTGTATGG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS GCA 90 bp ATCACCACGCCCACCATCAGGACCAGCACCACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTGAGGTCGGACAGCACACCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: ITTPTIRTSTTGSIP*IRVTLVRSDSTPFS
Trigger: CGAAAAGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCTGGTCCTGATGGTGGGCGTGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000429989.7
ENST00000469149.1
CDS-3UTR CAA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPAKPQAN*CGCGRH
Trigger: GTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTT...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACAGGGGGACAGTGGACAAGGCACTCCCGTGGCACCAGTCCACGCACTGGCTGACCGGCTCTCATCCTaGCTTTCTTTCCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: TQGDSGQGTPVAPVHALADRLSS*LSFHSS
Trigger: TGAGGAATGGAAAGAAAGCAAGGATGAGAGCCGGTC...AGCCAGTGCGTGGACTGGTGCCACGGGAGTGCCTTGTCCACTGTCCCCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCCAGTGCCAGGCTTCTaGTGGACCATGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRPVPGF*WTMQMV
Trigger: AACCATCTGCATGGTCCACAAGAAGCCTGGCACTGG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACACAGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGGGGAGGCTCGGGGTTaGTCTGTGGTAGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: THSSCSSSAQASIPCPHFGEARG*SVVDSF
Trigger: GAAGGAGTCTACCACAGACAAACCCCGAGCCTCCCC...GAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGAGTCACTGGCCCCTTGGCAGTaGATGGCCACTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SESSPPGSHRSPLCLSESLAPWQ*MATLLL
Trigger: AAGCAGCAGAGTGGCCATCAACTGCCAAGGGGCCAG...TGACTCTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACGCCTACCCTGGCCCCTaGGCAGTTGATGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHAYPGP*AVDGHS
Trigger: AGAGTGGCCATCAACTGCCAAGGGGCCAGGGTAGGC...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGCCACGCCCCAGGCTCTaGTTTTCAGCTGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWPRPRL*FSAGQS
Trigger: GGACTGTCCAGCTGAAAACAAGAGCCTGGGGCGTGG...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGTCCACGCCTGTGGGTCCCTCTACCCACGGCCCACCCACAGATGTGGATGACCCATCCACCTCCTTGTaGGACATAGGCTCCATTAGA +
Preference number: 5 (lower is better)
Translates to: LSTPVGPSTHGPPTDVDDPSTSL*DIGSIR
Trigger: TCTAATGGAGCCTATGTCCAACAAGGAGGTGGATGG...GTCATCCACATCTGTGGGTGGGCCGTGGGTAGAGGGACCCACAGGCGTGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS GCA 90 bp CCCAAGTCCTCTTACCAGAATCCCAGAAGCCACTTTAGAGACAACTaGCCCAGCTCTCAGGCTCCCAGCTCAGGCCAGCACAGCCTAAGG +
Preference number: 5 (lower is better)
Translates to: PKSSYQNPRSHFRDN*PSSQAPSSGQHSLR
Trigger: CCTTAGGCTGTGCTGGCCTGAGCTGGGAGCCTGAGAGCTGGGGCAGTTGTCTCTAAAGTGGCTTCTGGGATTCTGGTAAGAGGACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372156.5
CDS CCA 90 bp TTACGGTATGCAGCGCCTAAGGAGGATTGCAGCTGGTATGGCTATTaGGCAGGATTGGAAAGATCTGGGGCCGAAAGAGGAGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: LRYAAPKEDCSWYGY*AGLERSGAERGGPG
Trigger: GCCCGGCCCTCCTCTTTCGGCCCCAGATCTTTCCAATCCTGCCCAATAGCCATACCAGCTGCAATCCTCCTTAGGCGCTGCATACCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 5 (lower is better)
Translates to: QTTPDMCMSQQTALALRGGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CTGAGAAGCCATCAGGTGGGTTCCCTGATGAGACTGACACCCTCTCTGCTCTGCGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 5 (lower is better)
Translates to: LRSHQVGSLMRLTPSLLCGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...GCAGAGCAGAGAGGGTGTCAGTCTCATCAGGGAACCCACCTGATGGCTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAG +
Preference number: 5 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTGVGEC*YVGCME
Trigger: CTCCATGCATCCCACATACAAGCACTCCCCCACTCC...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GTAGTCACCTGCAGCATCCTCCTGGGCACGATGACAGAGGGAAGTGTCTCTACCTGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: VVTCSILLGTMTEGSVSTCIRVT*VRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCA...GGTAGAGACACTTCCCTCTGTCATCGTGCCCAGGAGGATGCTGCAGGTGACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCTACATACCCTATCCCTaGGTTCCTCTGGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGYIPYP*VPLAAA
Trigger: CGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTA...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTGTGCGGACAGCCGATGCTGGGCGGAGACTGCCACGTGACCGGCTCTCATCCTCTAGACCTATGGAGTaGAAGTTTCTCCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SVRTADAGRRLPRDRLSSSRPME*KFLQLS
Trigger: TGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAGA...GGATGAGAGCCGGTCACGTGGCAGTCTCCGCCCAGCATCGGCTGTCCGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGAGACGCCAAAAGCATTaGAGAATGAACGGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: AEERLSPGRGKWQASQPWRRQKH*RMNGPF
Trigger: AAAAGGCCCGTTCATTCTCAAATGCTTTTGGCGTCT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAACAGACCTCGAAGCCTaGTTCCTAAAGGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGTDLEA*FLKGQG
Trigger: TCCCTGTCCCTTTAGGAACAAGGCTTCGAGGTCTGT...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGCCTACCCTGGCCCCTaGGCAGTTGATGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGAYPGP*AVDGHS
Trigger: AGAGTGGCCATCAACTGCCAAGGGGCCAGGGTAGGC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GCAGAAGAACGGCTGTCTCCGGGGAGAGGCAAATGGCAGGCCAGCCAGCCCTGGATTTCAATGCACATGTaGCAAACAAGGCGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: AEERLSPGRGKWQASQPWISMHM*QTRRVP
Trigger: TGGGACTCGCCTTGTTTGCAACATGTGCATTGAAAT...CCAGGGCTGGCTGGCCTGCCATTTGCCTCTCCCCGGAGACAGCCGTTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGGTGACCCACCCGCCTaGGCTTCCCAAAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPGDPPA*ASQSTG
Trigger: CCCAGTACTTTGGGAAGCCAAGGCGGGTGGGTCACC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAACACAGGCCAGGAAATaGGGGTTTCTGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PLETTQPASSACCLTHCRTQARK*GFLSCR
Trigger: TCTGCAGCTCAGAAACCCCAATTTCCTGGCCTGTGT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS TCA 90 bp TGTTCCGCGGGAGCCAGCTTTCCAGCGCCTGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACTTGCTCTTCAGCTGCAGGAAAACAC +
Preference number: 5 (lower is better)
Translates to: CSAGASFPAPGCSLS*RWTHPTCSSAAGKH
Trigger: GTGTTTTCCTGCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTGGCTCCCGCGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACTGAGATCAGCGTCCTaGCCAGGAAGATGCCAAATA +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGLRSAS*PGRCQI
Trigger: TATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATCCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDPMLLC*MERDAL
Trigger: CAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGG...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 5 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAAGGCACGGGGTGTGGTaGCAGAAGAACGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGRHGVW*QKNGCL
Trigger: GAGACAGCCGTTCTTCTGCAACCACACCCCGTGCCT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGGAGTCGATGAGGTTTaGCAGATCGATATCGTCCCG +
Preference number: 5 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPGVDEV*QIDIVP
Trigger: CGGGACGATATCGATCTGCAAAACCTCATCGACTCC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCTACATACCCTATCCCTaGGTTCCTCTGGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASYIPYP*VPLAAA
Trigger: CGCGGCTGCCAGAGGAACCAAGGGATAGGGTATGTA...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGACTGACAGCTGAGTGCTaGGGCCTAAATCAGCATCTA +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGLTAEC*GLNQHL
Trigger: TAGATGCTGATTTAGGCCCAAGCACTCAGCTGTCAG...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGATTGAGTGGCAGAGACTaGGGACTAAAGGAGGACTTC +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGLSGRD*GLKEDF
Trigger: GAAGTCCTCCTTTAGTCCCAAGTCTCTGCCACTCAA...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGGTGACCCACCCGCCTaGGCTTCCCAAAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGGDPPA*ASQSTG
Trigger: CCCAGTACTTTGGGAAGCCAAGGCGGGTGGGTCACC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAAACCACCCCAGTGGCTaGAGTGTTTCTCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPNHPSG*SVSPLL
Trigger: AAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGTT...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCCCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASPMLLC*MERDAL
Trigger: CAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGG...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGGCCCCCATGCTGCTTaGCTTGATGGAGAGAGATGC +
Preference number: 5 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPGPHAA*LDGERC
Trigger: GCATCTCTCTCCATCAAGCAAAGCAGCATGGGGGCC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQCIRVT*VRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAAAACCACAAGCCAACTaGTGCGGCTGTGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKKPQAN*CGCGRH
Trigger: GTGCCGGCCACAGCCGCACAAGTTGGCTTGTGGTTT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCCAGTGCCAGGCTTCTaGTGGACCATGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHPVPGF*WTMQMV
Trigger: AACCATCTGCATGGTCCACAAGAAGCCTGGCACTGG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGCTGGGAGCCTTCCAACACTGCAGCCACCTACAGTCACATGCATGCCTGCCAGCCTTTAATGCAGCCTaGAACAGGAATTGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: LLGAFQHCSHLQSHACLPAFNAA*NRNWPS
Trigger: GCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGGC...TGGCAGGCATGCATGTGACTGTAGGTGGCTGCAGTGTTGGAAGGCTCCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGGGGAGGCTCGGGGTTaGTCTGTGGTAGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGGEARG*SVVDSF
Trigger: GAAGGAGTCTACCACAGACAAACCCCGAGCCTCCCC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGAGAAAGAGAACAGACCTaGAACTCCAAATGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGEREQT*NSKCLL
Trigger: CAGCAGGCATTTGGAGTTCAAGGTCTGTTCTCTTTC...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGAATGCAATGAGCCAAGATaGCACCACTGCGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: KFGQVTRGTLGLQHQQAECNEPR*HHCAPA
Trigger: GGCTGGAGCGCAGTGGTGCAATCTTGGCTCATTGCA...TTCTGCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACCATGCCCACCGCGCCACCGGCGCCATCAGGGCTTAATGCTATCAAGACCAGACTACATCGTTGCTCATaGATCATGGCCTGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: TMPTAPPAPSGLNAIKTRLHRCS*IMACEL
Trigger: TAACTCGCAGGCCATGATCAATGAGCAACGATGTAG...TCTGGTCTTGATAGCATTAAGCCCTGATGGCGCCGGTGGCGCGGTGGGCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCAGCAGGGTCCTTGCCTaGCAAATGACTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTSRVLA*QMTENL
Trigger: CAAGTTCTCAGTCATTTGCAAGGCAAGGACCCTGCT...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATCCCTGCCCACTGGGCTaGAGACTACTCGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDPCPLG*RLLGPR
Trigger: TCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGGG...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CACCCCCAGCCATATCATCCCAGACAGGAAGGGTGTAGCCTGGGCTTGCATACCCCATCCACCTCCTTGTaGGACATAGGCTCCATTAGA +
Preference number: 5 (lower is better)
Translates to: HPQPYHPRQEGCSLGLHTPSTSL*DIGSIR
Trigger: TCTAATGGAGCCTATGTCCAACAAGGAGGTGGATGG...GGTATGCAAGCCCAGGCTACACCCTTCCTGTCTGGGATGATATGGCTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCAACCACCCCAGTGGCTaGAGTGTTTCTCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFNHPSG*SVSPLL
Trigger: AAGAAGCGGAGAAACACTCAAGCCACTGGGGTGGTT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGCTAGTGATGTGTTCGTaGGTAAGAGGGAAGACAGGT +
Preference number: 5 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRLVMCS*VRGKTG
Trigger: ACCTGTCTTCCCTCTTACCAACGAACACATCACTAG...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCCTGGAACTCACACCCTaGCATAGTCACTCTCGCATC +
Preference number: 5 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPALELTP*HSHSRI
Trigger: GATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCAG...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS GCA 90 bp GCCAAGGCAACATTGCAAGAGTTCGTCTCAACTCACAGGGCTCCCTaGTTTCGACTCCACCCCAAGTCCTCTTACCAGAATCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: AKATLQEFVSTHRAP*FRLHPKSSYQNPRS
Trigger: GCTTCTGGGATTCTGGTAAGAGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGAGACGAACTCTTGCAATGTTGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372156.5
CDS-3UTR CAA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCACTGAGATCAGCGTCCTaGCCAGGAAGATGCCAAATA +
Preference number: 5 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSLRSAS*PGRCQI
Trigger: TATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAG...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAG +
Preference number: 5 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCGVGEC*YVGCME
Trigger: CTCCATGCATCCCACATACAAGCACTCCCCCACTCC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCGGAGTGGGGGAGTGCTaGTATGTGGGATGCATGGAG +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGGVGEC*YVGCME
Trigger: CTCCATGCATCCCACATACAAGCACTCCCCCACTCC...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCTGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGCIRVT*VRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCA...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCTGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: QTTPDMCMSQQTALALRGCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTGGAGTCGATGAGGTTTaGCAGATCGATATCGTCCCG +
Preference number: 5 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLGVDEV*QIDIVP
Trigger: CGGGACGATATCGATCTGCAAAACCTCATCGACTCC...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp GACCAGATGGGGTCCACCAACCGTCCAAACGTGATATGCTGCTGTCTTCAGGGCAGCCTTGAACAGGAATaGGCCAAGCCTTGCCAACTT +
Preference number: 5 (lower is better)
Translates to: DQMGSTNRPNVICCCLQGSLEQE*AKPCQL
Trigger: AAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGCT...GCCCTGAAGACAGCAGCATATCACGTTTGGACGGTTGGTGGACCCCATCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTGCAATGAGCCAAGATaGCACCACTGCGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKCNEPR*HHCAPA
Trigger: GGCTGGAGCGCAGTGGTGCAATCTTGGCTCATTGCA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GTTGTGGGCTGGTTCTTAAGACACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCAGGCAGAACAAGCATTaGAGGACACTCAGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: VVGWFLRHSRGLKGSAPARQNKH*RTLRLS
Trigger: AGAGAGCCTGAGTGTCCTCAAATGCTTGTTCTGCCT...GGCTGGAGCCGACCCTTTGAGTCCCCTTGAGTGTCTTAAGAACCAGCCCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGCTACATCGTTGCTCATaGATCATGGCCTGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGLHRCS*IMACEL
Trigger: TAACTCGCAGGCCATGATCAATGAGCAACGATGTAG...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CTGCCACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCAGCAGGGTCCTTGCCTaGCAAATGACTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: LPPPQWPLHGISQRNSTFSRVLA*QMTENL
Trigger: CAAGTTCTCAGTCATTTGCAAGGCAAGGACCCTGCT...GAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTCCTCCCTGTGAGAAGTaGCTGACAGTGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: GHSGGAVSGATEAEEGQSPPCEK*LTVKER
Trigger: CCTTTCCTTCACTGTCAGCAACTTCTCACAGGGAGG...ACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGGTTTCTCCGCTTCTTTaGCCTAGGATCTGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWVSPLL*PRICGD
Trigger: ATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAAC...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGAGTCATGGAGTGAGGTaGGAAGGGATCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKSHGVR*EGILQP
Trigger: GGGCTGGAGGATCCCTTCCAACCTCACTCCATGACT...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGCTGGAAGCGGGCTTaGAGGCATCTCTTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASSWKRA*RHLLEA
Trigger: TGCTTCTAAGAGATGCCTCAAAGCCCGCTTCCAGCT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS TCA 90 bp GCACTTTGGGAGTCCGAGGCAGACGGACAGCTTGAACCCAGAAGATaGGTTCGAGACCAGCCAAGGCAACATTGCAAGAGTTCGTCTCAA +
Preference number: 5 (lower is better)
Translates to: ALWESEADGQLEPRR*VRDQPRQHCKSSSQ
Trigger: TTGAGACGAACTCTTGCAATGTTGCCTTGGCTGGTCTCGAACTCATCTTCTGGGTTCAAGCTGTCCGTCTGCCTCGGACTCCCAAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372156.5
CDS GCA 90 bp ATGCAGCCTTTCGTGAAGATGGACTCATCCCACTTGCTCTTCAGCTaGAGGAAAACACCACAGGGGTCTGAGCCTTTGGCACACACGATG +
Preference number: 5 (lower is better)
Translates to: MQPFVKMDSSHLLFS*RKTPQGSEPLAHTM
Trigger: CATCGTGTGTGCCAAAGGCTCAGACCCCTGTGGTGTTTTCCTGCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAAAGGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS CCA 90 bp AGAAGCTGTGCCTTACGGTATGCAGCGCCTAAGGAGGATTGCAGCTaGTATGGCTATTGGGCAGGATTGGAAAGATCTGGGGCCGAAAGA +
Preference number: 5 (lower is better)
Translates to: RSCALRYAAPKEDCS*YGYWAGLERSGAER
Trigger: TCTTTCGGCCCCAGATCTTTCCAATCCTGCCCAATAGCCATACCAGCTGCAATCCTCCTTAGGCGCTGCATACCGTAAGGCACAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS-3UTR CAA 90 bp CCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCTGAGATCAGCGTCCTaGCCAGGAAGATGCCAAATA +
Preference number: 5 (lower is better)
Translates to: PEGCSHKFGQVTRGTLGLLRSAS*PGRCQI
Trigger: TATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAG...AAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCCCATGCTGCTTTGCTaGATGGAGAGAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGPMLLC*MERDAL
Trigger: CAGGGCATCTCTCTCCATCAAGCAAAGCAGCATGGG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGTCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: RVGSSHGHYLRLLRGECWSGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...CCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQLKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCACCAGTGCCAGGCTTCTaGTGGACCATGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPPVPGF*WTMQMV
Trigger: AACCATCTGCATGGTCCACAAGAAGCCTGGCACTGG...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp TCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAGCCTTGAACAGGAATaGGCCAAGCCTTGCCAACTT +
Preference number: 5 (lower is better)
Translates to: SQVWAGNKGDPWSSAPASSLEQE*AKPCQL
Trigger: AAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGCT...GCTTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGAGCCTTGAACAGGAATaGGCCAAGCCTTGCCAACTT +
Preference number: 5 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQSLEQE*AKPCQL
Trigger: AAGTTGGCAAGGCTTGGCCAATTCCTGTTCAAGGCT...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAAGCAACACCCTACCTaGTCTCCCCACCTCTATGGC +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGKQHPT*SPHLYG
Trigger: GCCATAGAGGTGGGGAGACAAGGTAGGGTGTTGCTT...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATATCGCAACTTTGGTTGTGTaGGTTTCTGGTAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: EQPQKSPDRKGGPVITDIATLVV*VSGSIC
Trigger: GCAGATGCTACCAGAAACCAACACAACCAAAGTTGC...GATATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGCTCATGCAGCAGCAGTGCCCAGGCTTCAATCCCATGTCCCCACTTCGACTCAACAAAAATTAGCCAGTaGTGGTGGCATGCGCCTGTA +
Preference number: 5 (lower is better)
Translates to: SSCSSSAQASIPCPHFDSTKISQ*WWHAPV
Trigger: TACAGGCGCATGCCACCACAACTGGCTAATTTTTGT...TGAGTCGAAGTGGGGACATGGGATTGAAGCCTGGGCACTGCTGCTGCATGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGTGGGTGGTGCAAAGGAAGGGGTACAGACAGCCCAGATAAGAAGCTGCCTGGGATTTCAATGCACATGTaGCAAACAAGGCGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GGWCKGRGTDSPDKKLPGISMHM*QTRRVP
Trigger: TGGGACTCGCCTTGTTTGCAACATGTGCATTGAAAT...CCCAGGCAGCTTCTTATCTGGGCTGTCTGTACCCCTTCCTTTGCACCACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGGGGTCTGAGTCAAGCCCTCCTGGCAGCCACAGGAGCCCTCTCTGTCTTTCAGTTTACATGCACACCTTaGCCAGTTATGAGAATTGTG +
Preference number: 5 (lower is better)
Translates to: GGLSQALLAATGALSVFQFTCTP*PVMRIV
Trigger: CACAATTCTCATAACTGGCAAAGGTGTGCATGTAAA...CTGAAAGACAGAGAGGGCTCCTGTGGCTGCCAGGAGGGCTTGACTCAGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGATGCCTGCCTACATCGTaGCTCATTGATCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGCLPTS*LIDHGL
Trigger: CAGGCCATGATCAATGAGCAACGATGTAGGCAGGCA...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCTGGGGGTGTCGGACACCTGGCCTGAATTaGCATCTTTTAACAAGTGCT +
Preference number: 5 (lower is better)
Translates to: RGHVTLMLKMGHWLWGCRTPGLN*HLLTSA
Trigger: AGCACTTGTTAAAAGATGCAAATTCAGGCCAGGTGT...CCGACACCCCCAGAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACCCTGCCCACTGGGCTaGAGACTACTCGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIPCPLG*RLLGPR
Trigger: TCTGGGTCCGAGTAGTCTCAAGCCCAGTGGGCAGGG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCACAGCCATCCACCTCCTaGTTGGACATAGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPAQPSTS*LDIGSI
Trigger: AATGGAGCCTATGTCCAACAAGGAGGTGGATGGCTG...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CCACTAGAGACCACACAGCCTGCCAGCTCTGCCTGCTGCCTGACTCACTGCAGAAGAAAAGAAAAAGTCTaGAGTGCTGGACAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: PLETTQPASSACCLTHCRRKEKV*SAGQAC
Trigger: ACAGGCTTGTCCAGCACTCAAGACTTTTTCTTTTCT...TCTGCAGTGAGTCAGGCAGCAGGCAGAGCTGGCAGGCTGTGTGGTCTCTAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAGGAACTGAGCCAGCCTaGCCAGTGGGAGCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIGTEPA*PVGAKQ
Trigger: CTGCTTGGCTCCCACTGGCAAGGCTGGCTCAGTTCC...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAAGCTGGAAGCGGGCTTaGAGGCATCTCTTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGSWKRA*RHLLEA
Trigger: TGCTTCTAAGAGATGCCTCAAAGCCCGCTTCCAGCT...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACTGAGATCAGCGTCCTaGCCAGGAAGATGCCAAATA +
Preference number: 5 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSLRSAS*PGRCQI
Trigger: TATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp CAAACAACCCCTGATATGTGCATGTCCCAGCAGACTGCGCTGGCACTCAGAGGCGCAAGTAAATTAAGGTaGCAGTCCATCCCTGAACGA +
Preference number: 5 (lower is better)
Translates to: QTTPDMCMSQQTALALRGASKLR*QSIPER
Trigger: TCGTTCAGGGATGGACTGCAACCTTAATTTACTTGC...GCCTCTGAGTGCCAGCGCAGTCTGCTGGGACATGCACATATCAGGGGTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWLKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCACTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSLKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCACTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPALKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCTGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: MELKFLQLSLIAGDKPQACIRVT*VRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCA...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp AGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCATGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: RGMQSQVWAGNKGDPWSSCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...TGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAATGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp CTCCCTGATCCTCACCTCTTCCCCAACCACCAGCTGACTAGAGATGCCTCCAACAGACGCCAAAAGCATTaGAGAATGAACGGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LPDPHLFPNHQLTRDASNRRQKH*RMNGPF
Trigger: AAAAGGCCCGTTCATTCTCAAATGCTTTTGGCGTCT...GTTGGAGGCATCTCTAGTCAGCTGGTGGTTGGGGAAGAGGTGAGGATCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACCAGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGAAACTCACCCCACCTaGGGACTTTCCAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: TSPRTGSGLLHLNMAEDPETHPT*GLSSFK
Trigger: CTTGAAACTGGAAAGTCCCAAGGTGGGGTGAGTTTC...AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATACATTATCCCCAGCGTaGATGTTCACAATAATCCCC +
Preference number: 5 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDTLSPA*MFTIIP
Trigger: GGGGATTATTGTGAACATCAACGCTGGGGATAATGT...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCAGGCAGAACAAGCATTaGAGGACACTCAGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLRQNKH*RTLRLS
Trigger: AGAGAGCCTGAGTGTCCTCAAATGCTTGTTCTGCCT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GACCAGAAGACAGTGAGGCCACGCTGGGGAGTGGGGGAGTGCTTGTATGTGGGATTTACATGCACACCTTaGCCAGTTATGAGAATTGTG +
Preference number: 5 (lower is better)
Translates to: DQKTVRPRWGVGECLYVGFTCTP*PVMRIV
Trigger: CACAATTCTCATAACTGGCAAAGGTGTGCATGTAAA...TCCCACATACAAGCACTCCCCCACTCCCCAGCGTGGCCTCACTGTCTTCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACACAGCTAGACCTTaGCATCATTTCAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: EGCSHKFGQVTRGTLGLQHTARP*HHFRWL
Trigger: AAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGTG...CTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGTCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWSGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTGAAAAGGAGGTACTaGTACCAGCAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGLKRRY*YQQLTL
Trigger: CAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAG...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGTGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341863.10
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS-3UTR CAA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCGGAGTCGATGAGGTTTaGCAGATCGATATCGTCCCG +
Preference number: 5 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVGVDEV*QIDIVP
Trigger: CGGGACGATATCGATCTGCAAAACCTCATCGACTCC...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp ACTCAAGGGGACTCAAAGGGTCGGCTCCAGCCATGGACACTATCTAAGGCTGCTTCACTTCTTCCCATATaGGCTCACAGCTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: TQGDSKGRLQPWTLSKAASLLPI*AHSCDF
Trigger: AAAGTCACAGCTGTGAGCCAATATGGGAAGAAGTGA...AGCAGCCTTAGATAGTGTCCATGGCTGGAGCCGACCCTTTGAGTCCCCTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGCAAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCACACAGCTAGACCTTaGCATCATTTCAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SKQKQRGHVTLMLKMGHWHTARP*HHFRWL
Trigger: AAGCCACCTGAAATGATGCAAAGGTCTAGCTGTGTG...CCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AAGGGTGGACCAGTGATCACCGATATCCCATTAGGGGCGGTCACCAGAAACAAAAGGTTGTGGCCCACCTaGCCCCAAATCTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: KGGPVITDIPLGAVTRNKRLWPT*PQISSK
Trigger: TTTTGATGAGATTTGGGGCAAGGTGGGCCACAACCT...TTTGTTTCTGGTGACCGCCCCTAATGGGATATCGGTGATCACTGGTCCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCATCAGGCTTACTTCACTaGAACATGGCTGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: HILCLWVDSRGMQSQVWASGLLH*NMAEDP
Trigger: AGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGA...TGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAAGCTGCAGCCTGGGGTaGTGGCTAGGCACGGGGTGT +
Preference number: 5 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTSCSLG*WLGTGC
Trigger: ACACCCCGTGCCTAGCCACAACCCCAGGCTGCAGCT...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCAGCAAGCAAGTAAATTAAGGTaGCAGTCCATCCCTGAACGA +
Preference number: 5 (lower is better)
Translates to: SHKFGQVTRGTLGLQHQQASKLR*QSIPER
Trigger: TCGTTCAGGGATGGACTGCAACCTTAATTTACTTGC...TTGCTGGTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp AGTCCACGCACTGGCTCAGGCTTACTTCACTTGAACATGGCTGAGGATCCTGCATCTAGACCTATGGAGTaGAAGTTTCTCCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SPRTGSGLLHLNMAEDPASRPME*KFLQLS
Trigger: TGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAGA...TGCAGGATCCTCAGCCATGTTCAAGTGAAGTAAGCCTGAGCCAGTGCGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp AAGCAGAAACAGAGAGGTCACGTCACGCTGATGCTTAAGATGGGGCACTGGCTCAGACGCCAAAAGCATTaGAGAATGAACGGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: KQKQRGHVTLMLKMGHWLRRQKH*RMNGPF
Trigger: AAAAGGCCCGTTCATTCTCAAATGCTTTTGGCGTCT...GAGCCAGTGCCCCATCTTAAGCATCAGCGTGACGTGACCTCTCTGTTTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAAAGCAACACCCTACCTaGTCTCCCCACCTCTATGGC +
Preference number: 5 (lower is better)
Translates to: LVPLAAAFTTEMLSNISIKQHPT*SPHLYG
Trigger: GCCATAGAGGTGGGGAGACAAGGTAGGGTGTTGCTT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATTTGAGTGGCAGAGACTaGGGACTAAAGGAGGACTTC +
Preference number: 5 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDLSGRD*GLKEDF
Trigger: GAAGTCCTCCTTTAGTCCCAAGTCTCTGCCACTCAA...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCAGGTTGTGGCCCACCTaGCCCCAAATCTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: SHIKTHSLSLGRLQRDAVRLWPT*PQISSK
Trigger: TTTTGATGAGATTTGGGGCAAGGTGGGCCACAACCT...GACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTCTTCAGCACCTGAGAAGCAGAATCTaGTTAACAATGCAAACTCTG +
Preference number: 5 (lower is better)
Translates to: GCSHKFGQVTRGTLGLQHLRSRI*LTMQTL
Trigger: CAGAGTTTGCATTGTTAACAAGATTCTGCTTCTCAG...GTGCTGAAGACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372158.6
CDS-3UTR CAA 90 bp ATGGAGTTGAAGTTTCTCCAGCTCTCACTTATAGCGGGGGATAAACCACAAGCCGCCTTTAATGCAGCCTaGAACAGGAATTGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: MELKFLQLSLIAGDKPQAAFNAA*NRNWPS
Trigger: GCTTGGCCAATTCCTGTTCAAGGCTGCATTAAAGGC...GGCTTGTGGTTTATCCCCCGCTATAAGTGAGAGCTGGAGAAACTTCAACTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACCTCCCCAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGATTATTAAACCATGCATaGGAAGACCCTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: TSPVASAWNLPEKFHVPGLLNHA*EDPAGI
Trigger: TATTCCAGCAGGGTCTTCCAATGCATGGTTTAATAA...TCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTGGGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp ACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGGGGGACCCTTGGTTTATTAAACCATGCATaGGAAGACCCTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: TPEGCSHKFGQVTRGTLGLLNHA*EDPAGI
Trigger: TATTCCAGCAGGGTCTTCCAATGCATGGTTTAATAA...ACCAAGGGTCCCCCTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCACAGACCTCGAAGCCTaGTTCCTAAAGGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSTDLEA*FLKGQG
Trigger: TCCCTGTCCCTTTAGGAACAAGGCTTCGAGGTCTGT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCCCCGGGCAACTTTGGTaGTGTTGGTTTCTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSPGQLW*CWFLVA
Trigger: TGCTACCAGAAACCAACACAACCAAAGTTGCCCGGG...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCAGGTAACAAGACATTATCCCCAGCGTaGATGTTCACAATAATCCCC +
Preference number: 5 (lower is better)
Translates to: CLWVDSRGMQSQVWAGNKTLSPA*MFTIIP
Trigger: GGGGATTATTGTGAACATCAACGCTGGGGATAATGT...CTTGTTACCTGCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp ACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCTCACTTCTTCCCATATaGGCTCACAGCTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: THSLSLGRLQRDAVTSLGSLLPI*AHSCDF
Trigger: AAAGTCACAGCTGTGAGCCAATATGGGAAGAAGTGA...GCCCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGTTATGAGAATTGTGTaGCAAAGAGGAAGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGVMRIV*QRGRSG
Trigger: TCCACTCCTTCCTCTTTGCAACACAATTCTCATAAC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAAGAGCAGCCCCAGAAAAGCCCTGACAGGAAGGGTGGACCAGTGATCACCGATGCCTGTAAACTCCTTTaGCTTAACCTTGTTTTAGTT +
Preference number: 5 (lower is better)
Translates to: QEQPQKSPDRKGGPVITDACKLL*LNLVLV
Trigger: AACTAAAACAAGGTTAAGCAAAAGGAGTTTACAGGC...ATCGGTGATCACTGGTCCACCCTTCCTGTCAGGGCTTTTCTGGGGCTGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATACTGGAACTCACACCCTaGCATAGTCACTCTCGCATC +
Preference number: 5 (lower is better)
Translates to: LVPLAAAFTTEMLSNISILELTP*HSHSRI
Trigger: GATGCGAGAGTGACTATGCAAGGGTGTGAGTTCCAG...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAAACACAAGGCACGGGGTGTGGTaGCAGAAGAACGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FHKRVWQSKRSITLPKNTRHGVW*QKNGCL
Trigger: GAGACAGCCGTTCTTCTGCAACCACACCCCGTGCCT...TGTGTTTTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATCAGCACTGGTTAAAGTaGAGCAAGCAGATATTCTCC +
Preference number: 5 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDQHWLK*SKQIFS
Trigger: GGAGAATATCTGCTTGCTCAACTTTAACCAGTGCTG...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341863.10
CDS-3UTR CAA 90 bp TCCAGCCATGGACACTATCTAAGGCTGCTCAGAGGAGAATGCTGGAGGAGAGGAGCCTTAAAGATCTCCTaGTCAGATGAGACTTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSHGHYLRLLRGECWRRGALKIS*SDETFR
Trigger: TCTAAAAGTCTCATCTGACAAGGAGATCTTTAAGGC...TCCTCTCCTCCAGCATTCTCCTCTGAGCAGCCTTAGATAGTGTCCATGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAAGTTACTATCCCATTTaGCTGAGGAAATGGTACCCA +
Preference number: 5 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPSYYPI*LRKWYP
Trigger: TGGGTACCATTTCCTCAGCAAAATGGGATAGTAACT...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GAAAGAATTGTTTCGGAGCCTTGTAAGGAATACTCACGTCCTCCTTCTCCAAGCACAAAAATTAGCCAGTaGTGGTGGCATGCGCCTGTA +
Preference number: 5 (lower is better)
Translates to: ERIVSEPCKEYSRPPSPSTKISQ*WWHAPV
Trigger: TACAGGCGCATGCCACCACAACTGGCTAATTTTTGT...GCTTGGAGAAGGAGGACGTGAGTATTCCTTACAAGGCTCCGAAACAATTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp CAGTGGCCTCTGCATGGAATCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCCTTAAAGATCTCCTaGTCAGATGAGACTTTTAGA +
Preference number: 5 (lower is better)
Translates to: QWPLHGISQRNSTFQEGCALKIS*SDETFR
Trigger: TCTAAAAGTCTCATCTGACAAGGAGATCTTTAAGGC...ACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGATTCCATGCAGAGGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGTTATGAGAATTGTGTaGCAAAGAGGAAGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWVMRIV*QRGRSG
Trigger: TCCACTCCTTCCTCTTTGCAACACAATTCTCATAAC...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTATGTGTTCACAACTTTTaGCGCAGGATCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: STATSIHHTRMYTPASKLCVHNF*RRIWHA
Trigger: TGCGTGCCAGATCCTGCGCAAAAAGTTGTGAACACA...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp CACCACTCCCACATAAAGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATTTATTAAACCATGCATaGGAAGACCCTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: HHSHIKTHSLSLGRLQRDLLNHA*EDPAGI
Trigger: TATTCCAGCAGGGTCTTCCAATGCATGGTTTAATAA...ATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCTTTATGTGGGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp GGAAGACGGGACAGGAAAAATAACGTTGACAAGATCCTGAGAGGGGGTGGACCAATCTCAAGTTCATATTaGAGGAAAGTGAGGCATAAG +
Preference number: 5 (lower is better)
Translates to: GRRDRKNNVDKILRGGGPISSSY*RKVRHK
Trigger: CTTATGCCTCACTTTCCTCAAATATGAACTTGAGAT...TGGTCCACCCCCTCTCAGGATCTTGTCAACGTTATTTTTCCTGTCCCGTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGTTTCTCCGCTTCTTTaGCCTAGGATCTGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: STATSIHHTRMYTPASKLVSPLL*PRICGD
Trigger: ATCTCCGCAGATCCTAGGCAAAAGAAGCGGAGAAAC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TTGGTTCCTCTGGCAGCCGCGTTTACCACTGAGATGCTTAGCAATATCTCAATAACACCTGGCCTGAATTaGCATCTTTTAACAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LVPLAAAFTTEMLSNISITPGLN*HLLTSA
Trigger: AGCACTTGTTAAAAGATGCAAATTCAGGCCAGGTGT...TATTGAGATATTGCTAAGCATCTCAGTGGTAAACGCGGCTGCCAGAGGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp AGACACATTCTCTGTCTCTGGGTAGACTCCAGAGGGATGCAGTCACAAGTTTGGGCCTGTAAACTCCTTTaGCTTAACCTTGTTTTAGTT +
Preference number: 5 (lower is better)
Translates to: RHILCLWVDSRGMQSQVWACKLL*LNLVLV
Trigger: AACTAAAACAAGGTTAAGCAAAAGGAGTTTACAGGC...CCAAACTTGTGACTGCATCCCTCTGGAGTCTACCCAGAGACAGAGAATGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCAACAGCCACCAGTATACACCACACTAGAATGTACACTCCGGCAAGTAAATTAGCAAGTAAATTAAGGTaGCAGTCCATCCCTGAACGA +
Preference number: 5 (lower is better)
Translates to: STATSIHHTRMYTPASKLASKLR*QSIPER
Trigger: TCGTTCAGGGATGGACTGCAACCTTAATTTACTTGC...TAATTTACTTGCCGGAGTGTACATTCTAGTGTGGTGTATACTGGTGGCTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS-3UTR CAA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTCTAGTGATGTGTTCGTaGGTAAGAGGGAAGACAGGT +
Preference number: 5 (lower is better)
Translates to: SPREIPRSRKVVHPLIFILVMCS*VRGKTG
Trigger: ACCTGTCTTCCCTCTTACCAACGAACACATCACTAG...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTTCTAGACCTATGGAGTaGAAGTTTCTCCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SPREIPRSRKVVHPLIFISRPME*KFLQLS
Trigger: TGAGAGCTGGAGAAACTTCAACTCCATAGGTCTAGA...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTAGTTACTATCCCATTTaGCTGAGGAAATGGTACCCA +
Preference number: 5 (lower is better)
Translates to: SPREIPRSRKVVHPLIFISYYPI*LRKWYP
Trigger: TGGGTACCATTTCCTCAGCAAAATGGGATAGTAACT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp TCTCCCAGAGAAATTCCACGTTCCAGGAAGGTTGTGCATCCATTAATTTTCATTAGAAAAGAAAAAGTCTaGAGTGCTGGACAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SPREIPRSRKVVHPLIFIRKEKV*SAGQAC
Trigger: ACAGGCTTGTCCAGCACTCAAGACTTTTTCTTTTCT...AATGAAAATTAATGGATGCACAACCTTCCTGGAACGTGGAATTTCTCTGGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS-3UTR CAA 90 bp GATATATTCCATAAAAGAGTTTGGCAGTCAAAGAGAAGCATCACACTTCCGAAAATCTCAAGTTCATATTaGAGGAAAGTGAGGCATAAG +
Preference number: 5 (lower is better)
Translates to: DIFHKRVWQSKRSITLPKISSSY*RKVRHK
Trigger: CTTATGCCTCACTTTCCTCAAATATGAACTTGAGAT...TTTCGGAAGTGTGATGCTTCTCTTTGACTGCCAAACTCTTTTATGGAATATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372158.6
ENST00000429989.7
CDS CCA 72 bp GAAAGATCTGGGGCCGAAAGAGGAGGGCCGGGCACGTaGGGGGTGGGTGGCCTCGGGTACAGCTGGACTTGC +
Preference number: 6 (lower is better)
Translates to: ERSGAERGGPGT*GVGGLGYSWTC
Trigger: GCAAGTCCAGCTGTACCCGAGGCCACCCACCCCCCACGTGCCCGGCCCTCCTCTTTCGGCCCCAGATCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS GCA 72 bp GCCTCCCAGCGTGGCTCAGCTCGGCTCCCTCAACTCTaGTCCTCAGAAGTGATGGCCGGCCTTCACTGCCTC +
Preference number: 6 (lower is better)
Translates to: ASQRGSARLPQL*SSEVMAGLHCL
Trigger: GAGGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCGAGCTGAGCCACGCTGGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265450.5
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS CCA 72 bp CCTCGGGTACAGCTGGACTTGCCTGCCCAATCCCAATaGGAAAGGGCTGGCCCACCAGGCAACCACAAGCCG +
Preference number: 6 (lower is better)
Translates to: PRVQLDLPAQSQ*ERAGPPGNHKP
Trigger: CGGCTTGTGGTTGCCTGGTGGGCCAGCCCTTTCCCATTGGGATTGGGCAGGCAAGTCCAGCTGTACCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CAA 90 bp GCAGCGCCTAAGGAGGATTGCAGCTGGTATGGCTATTGGGCAGGATaGGAAAGATCTGGGGCCGAAAGAGGAGGGCCGGGCACGTGGGGG +
Preference number: 6 (lower is better)
Translates to: AAPKEDCSWYGYWAG*ERSGAERGGPGTWG
Trigger: CCCCCACGTGCCCGGCCCTCCTCTTTCGGCCCCAGATCTTTCCAATCCTGCCCAATAGCCATACCAGCTGCAATCCTCCTTAGGCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS GCA 72 bp TGGCTTGTTCCACGGCCTCCCTGCTGTCTGCCAAGCTaGAGGCAGACAACCCACAGAGAAGGCCTGATGCCC +
Preference number: 6 (lower is better)
Translates to: WLVPRPPCCLPS*RQTTHREGLMP
Trigger: GGGCATCAGGCCTTCTCTGTGGGTTGTCTGCCTGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 72 bp AGGGCTGGCCCACCAGGCAACCACAAGCCGGCAAAGTaGAACAGACCAGAGGTGGAGTGGCTTGTTCCACGG +
Preference number: 6 (lower is better)
Translates to: RAGPPGNHKPAK*NRPEVEWLVPR
Trigger: CCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGCCTGGTGGGCCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS TCA 72 bp CCCCTCGCTGGGCACTGTGCCATCGCACCACCTGTCTaGCCAAAGGCTCCCTGGCTGTTTCCTTTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: PLAGHCAIAPPV*PKAPWLFPFRS
Trigger: AGACCTGAAAGGAAACAGCCAGGGAGCCTTTGGTCAGACAGGTGGTGCGATGGCACAGTGCCCAGCGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS GCA 72 bp AGACCAGAGGTGGAGTGGCTTGTTCCACGGCCTCCCTaGTGTCTGCCAAGCTGCAGGCAGACAACCCACAGA +
Preference number: 6 (lower is better)
Translates to: RPEVEWLVPRPP*CLPSCRQTTHR
Trigger: TCTGTGGGTTGTCTGCCTGCAGCTTGGCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 72 bp CAGCACAGGGAGGTGCATGCTCTATCGGGGGCCCGCTaGGGAGGTGCTTACAGCTTTCTGAAGGGAGTCGAT +
Preference number: 6 (lower is better)
Translates to: QHREVHALSGAR*GGAYSFLKGVD
Trigger: ATCGACTCCCTTCAGAAAGCTGTAAGCACCTCCCCAGCGGGCCCCCGATAGAGCATGCACCTCCCTGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 72 bp GCAACCACAAGCCGGCAAAGTGGAACAGACCAGAGGTaGAGTGGCTTGTTCCACGGCCTCCCTGCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: ATTSRQSGTDQR*SGLFHGLPAVC
Trigger: GCAGACAGCAGGGAGGCCGTGGAACAAGCCACTCCACCTCTGGTCTGTTCCACTTTGCCGGCTTGTGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS CCA 72 bp GCTGGACTTGCCTGCCCAATCCCAATGGGAAAGGGCTaGCCCACCAGGCAACCACAAGCCGGCAAAGTGGAA +
Preference number: 6 (lower is better)
Translates to: AGLACPIPMGKG*PTRQPQAGKVE
Trigger: TTCCACTTTGCCGGCTTGTGGTTGCCTGGTGGGCCAGCCCTTTCCCATTGGGATTGGGCAGGCAAGTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS TCA 72 bp GCTCAGCTCGGCTCCCTCAACTCTGCTCCTCAGAAGTaGTGGCCGGCCTTCACTGCCTCGATGTCTGAGATC +
Preference number: 6 (lower is better)
Translates to: AQLGSLNSAPQK*WPAFTASMSEI
Trigger: GATCTCAGACATCGAGGCAGTGAAGGCCGGCCATCACTTCTGAGGAGCAGAGTTGAGGGAGCCGAGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265450.5
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS TCA 72 bp CCACAGGGTCGATTCCATGCATCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCTTTTCGCTCCATGCCC +
Preference number: 6 (lower is better)
Translates to: PQGRFHASGSLW*GRTAHPFRSMP
Trigger: GGGCATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000429989.7
ENST00000469149.1
CDS GCA 72 bp CCCACCATCAGGACCAGCACCACAGGGTCGATTCCATaGATCCGGGTCACTTTGGTGAGGTCGGACAGCACA +
Preference number: 6 (lower is better)
Translates to: PTIRTSTTGSIP*IRVTLVRSDST
Trigger: TGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCTGGTCCTGATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372157.6
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000469149.1
ENST00000616406.1
CDS CAA 90 bp ATCAGGACCAGCACCACAGGGTCGATTCCATGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACACCCTTTTCGCTCCATGCCCACAGC +
Preference number: 6 (lower is better)
Translates to: IRTSTTGSIPCIRVT*VRSDSTPFSLHAHS
Trigger: GCTGTGGGCATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCTGGTCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000429989.7
ENST00000469149.1
CDS CAA 72 bp AAGGAGGATTGCAGCTGGTATGGCTATTGGGCAGGATaGGAAAGATCTGGGGCCGAAAGAGGAGGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: KEDCSWYGYWAG*ERSGAERGGPG
Trigger: GCCCGGCCCTCCTCTTTCGGCCCCAGATCTTTCCAATCCTGCCCAATAGCCATACCAGCTGCAATCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS TCA 72 bp GGAGCCAGCTTTCCAGCGCCTGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACTTGCTCTTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: GASFPAPGCSLS*RWTHPTCSSAA
Trigger: TGCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS CAA 72 bp AGCACCACAGGGTCGATTCCATGCATCCGGGTCACTTaGGTGAGGTCGGACAGCACACCCTTTTCGCTCCAT +
Preference number: 6 (lower is better)
Translates to: STTGSIPCIRVT*VRSDSTPFSLH
Trigger: ATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000429989.7
ENST00000469149.1
CDS TCA 72 bp GGAGCCAGCTTTCCAGCGCCTGGATGCAGCCTTTCGTaGAGATGGACTCATCCCACTTGCTCTTCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: GASFPAPGCSLS*RWTHPTCSSAE
Trigger: TTCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341863.10
ENST00000372156.5
ENST00000372157.6
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS TCA 72 bp CCACAGGGTCGATTCCATGCATCCGGGTCACTTTGGTaGGGTCGGACAGCACACCCTGAAAGAGACAGAGAA +
Preference number: 6 (lower is better)
Translates to: PQGRFHASGSLW*GRTAHPERDRE
Trigger: TTCTCTGTCTCTTTCAGGGTGTGCTGTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372157.6
CDS TCA 72 bp GAGTCCGAGGCAGACGGACAGCTTGAACCCAGAAGATaGGTTCGAGACCAGCCAAGGCAACATTGCAAGAGT +
Preference number: 6 (lower is better)
Translates to: ESEADGQLEPRR*VRDQPRQHCKS
Trigger: ACTCTTGCAATGTTGCCTTGGCTGGTCTCGAACTCATCTTCTGGGTTCAAGCTGTCCGTCTGCCTCGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372156.5
CDS GCA 72 bp GAAGTAGACGTTGAGGTCCCAGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAGCTTTCTGAAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: EVDVEVPVFRAI*ATALVSFLKGV
Trigger: GACTCCCTTCAGAAAGCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGACTGGGACCTCAACGTCTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372156.5
ENST00000372157.6
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000616406.1
CDS CCA 72 bp GCCTTACGGTATGCAGCGCCTAAGGAGGATTGCAGCTaGTATGGCTATTGGGCAGGATTGGAAAGATCTGGG +
Preference number: 6 (lower is better)
Translates to: ALRYAAPKEDCS*YGYWAGLERSG
Trigger: CCCAGATCTTTCCAATCCTGCCCAATAGCCATACCAGCTGCAATCCTCCTTAGGCGCTGCATACCGTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS TCA 72 bp TCAGAAGTGATGGCCGGCCTTCACTGCCTCGATGTCTaGGATCAGCGTCCTTGCCAGGAAGATGCCAAATAT +
Preference number: 6 (lower is better)
Translates to: SEVMAGLHCLDV*DQRPCQEDAKY
Trigger: ATATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAGACATCGAGGCAGTGAAGGCCGGCCATCACTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265450.5
ENST00000341863.10
ENST00000372156.5
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS TCA 72 bp CTGGGGAGGTGCTTACAGCTTTCTGAAGGGAGTCGATaGGGTTTTGCAGATCGATATCGTCCCGGTAGGACT +
Preference number: 6 (lower is better)
Translates to: LGRCLQLSEGSR*GFADRYRPGRT
Trigger: AGTCCTACCGGGACGATATCGATCTGCAAAACCTCATCGACTCCCTTCAGAAAGCTGTAAGCACCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469149.1
CDS GCA 72 bp TTCGTGAAGATGGACTCATCCCACTTGCTCTTCAGCTaGAGGAAAACACCACAGGGGTCTGAGCCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: FVKMDSSHLLFS*RKTPQGSEPLA
Trigger: TGCCAAAGGCTCAGACCCCTGTGGTGTTTTCCTGCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS CAA 72 bp TGGATGCAGCCTTTCGTGAAGATGGACTCATCCCACTaGCTCTTCAGCTGCAGGAAAACACCACAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: WMQPFVKMDSSH*LFSCRKTPQGS
Trigger: AGACCCCTGTGGTGTTTTCCTGCAGCTGAAGAGCAAGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265450.5
CDS CAA 90 bp CAGGTGATGCTCATGCTGCCCATCAGCAGGTCTGTGGATGGCACTTaGAATAGTAAGGATGTAACGCAACTCACAGGGCTCCCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: QVMLMLPISRSVDGT*NSKDVTQLTGLPAF
Trigger: GAAAGCAGGGAGCCCTGTGAGTTGCGTTACATCCTTACTATTCAAAGTGCCATCCACAGACCTGCTGATGGGCAGCATGAGCATCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372158.6
CDS TCA 72 bp GGAAGATGCCAAATATCTGCAACAGCGAGATGGCGATaGAGACGCCAGCCACAATGTAAATGTTCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: GRCQISATARWR*RRQPQCKCSAG
Trigger: TCCCGCGGAACATTTACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGTTGCAGATATTTGGCATCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265450.5
ENST00000341863.10
ENST00000372156.5
ENST00000372157.6
ENST00000372158.6
ENST00000372164.7
ENST00000429989.7
ENST00000481124.5
ENST00000616406.1
CDS GCA 72 bp GAAGTAGACGTTGAGGTCCCAGTCTTCAGGGCCATATaGGCCACAGCACTGGTTAAAGTTGAGCAAGCAGAT +
Preference number: 6 (lower is better)
Translates to: EVDVEVPVFRAI*ATALVKVEQAD
Trigger: ATCTGCTTGCTCAACTTTAACCAGTGCTGTGGCGCATATGGCCCTGAAGACTGGGACCTCAACGTCTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341863.10
CDS GCA 72 bp ACATTGCAAGAGTTCGTCTCAACTCACAGGGCTCCCTaGTTTCGACTCCACCCCAAGTCCTCTTACCAGAAT +
Preference number: 6 (lower is better)
Translates to: TLQEFVSTHRAP*FRLHPKSSYQN
Trigger: ATTCTGGTAAGAGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGAGACGAACTCTTGCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372156.5
CDS GCA 72 bp GAAGTAGACGTTGAGGTCCCAGTCTTCAGGGCCATATaGGCCACAGCACTGGTTCCAGAAGATGATGTTGTA +
Preference number: 6 (lower is better)
Translates to: EVDVEVPVFRAI*ATALVPEDDVV
Trigger: TACAACATCATCTTCTGGAACCAGTGCTGTGGCGCATATGGCCCTGAAGACTGGGACCTCAACGTCTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481124.5
CDS CAA 72 bp CTCATGCTGCCCATCAGCAGGTCTGTGGATGGCACTTaGAATAGTAAGGATGTAACGCAACTCACAGGGCTC +
Preference number: 6 (lower is better)
Translates to: LMLPISRSVDGT*NSKDVTQLTGL
Trigger: GAGCCCTGTGAGTTGCGTTACATCCTTACTATTCAAAGTGCCATCCACAGACCTGCTGATGGGCAGCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372158.6
CDS CCA 72 bp ATCTTGTTAACAATGCAAACTCTGATTCAGCTGATCTaGATGGAGACCCCTCAAGATTCTACAGCGCAGCAA +
Preference number: 6 (lower is better)
Translates to: ILLTMQTLIQLI*METPQDSTAQQ
Trigger: TTGCTGCGCTGTAGAATCTTGAGGGGTCTCCATCCAGATCAGCTGAATCAGAGTTTGCATTGTTAACAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372156.5
ENST00000372158.6