Pregenerated sensors for TSPAN13 (Homo sapiens)
Ensembl gene IDs: ENSG00000106537Ensembl transcript IDs: ENST00000262067.5, ENST00000466195.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTaGCACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GHSGQCPTMNTVNSR*HRASETTSFKYFSA Trigger: TGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| 3UTR GCA 90 bp | AGTTTTTCTGCAGGTAAAAATGCTAAGAAAGGCCACAGTGGACAGTaGCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SFSAGKNAKKGHSGQ*PTMNTVNSRCHRAS Trigger: TGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTTAGCATTTTTACCTGCAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCCACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGTTTCCTTCCTTAAACTaGCAAATGGAGCTTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VPPSFRDHKFQIFFSNGKFPSLN*QMELNR Trigger: TCTGTTAAGCTCCATTTGCCAGTTTAAGGAAGGAAA...CTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| 3UTR GCA 72 bp | GCAGGTAAAAATGCTAAGAAAGGCCACAGTGGACAGTaGCCGACAATGAATACAGTAAATTCCAGGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: AGKNAKKGHSGQ*PTMNTVNSRCH Trigger: GTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTTAGCATTTTTACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| 3UTR GCA 72 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTaGCACCGAGCTTCAGAGACCACAAGTTTCAAATAT | + |
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Preference number: 3 (lower is better) Translates to: GQCPTMNTVNSR*HRASETTSFKY Trigger: ATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCGGCTCGGACCCGCTTTaGAACCTGCGGCCGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCGSDPL*NLRPPQ Trigger: CTGCGGCGGCCGCAGGTTCCAAAGCGGGTCCGAGCC...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGCCGGCGGAGGTTCCCTaGCAGCTGCTTTGTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GQCPTMNTVNSRCHRASEPAEVP*QLLCPC Trigger: GCAAGGACAAAGCAGCTGTCAGGGAACCTCCGCCGG...CTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCTTTGTCCTTGCCTTTaGGGCCTGGCCCAGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCLCPCL*GLAQAG Trigger: CCCCGCCTGGGCCAGGCCCCAAAGGCAAGGACAAAG...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | GTGCCACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGCTTGCCTTTGGGGCCTaGCCCAGGCGGGGCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: VPPSFRDHKFQIFFSNGKLAFGA*PRRGSN Trigger: GTTGCTGCCCCGCCTGGGCCAGGCCCCAAAGGCAAG...CTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | CAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCCCCCGCAAACCATCTTaGAACCTGTGGTTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: QWTVPDNEYSKFQVPPSFPRKPS*NLWLPA Trigger: TGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGG...GAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | CAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCCGACCACTCGGAGACTaGAAATCAGCCCGAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QWTVPDNEYSKFQVPPSFRPLGD*KSARSQ Trigger: TTGGCTTCGGGCTGATTTCCAGTCTCCGAGTGGTCG...GAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCAAGAAGATGCCCACTaGAATGACCACGCCGACCAC | + |
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Preference number: 4 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCQEDAH*NDHADH Trigger: GTGGTCGGCGTGGTCATTGCAGTGGGCATCTTCTTG...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | AATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAACGCACAGGCAGTTCTTaGAACACGCGAAGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NEYSKFQVPPSFRDHKFQRTGSS*NTRSPR Trigger: GCGGGGGCTTCGCGTGTTCCAAGAACTGCCTGTGCG...TTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGCATGGCGAGCACGAGTaGTCACTTTTAACACAGCTA | + |
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Preference number: 4 (lower is better) Translates to: GQCPTMNTVNSRCHRASEHGEHE*SLLTQL Trigger: TAGCTGTGTTAAAAGTGACCACTCGTGCTCGCCATG...CTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | AATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAACCAACCTCCAGAAGCTaGCCCTGTTGCTCCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: NEYSKFQVPPSFRDHKFQPTSRS*PCCSWF Trigger: GAACCAGGAGCAACAGGGTCAGCTTCTGGAGGTTGG...TTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | ACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCTCAGCCCGAAGCCAATaGCCCACGCAGCAATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TMNTVNSRCHRASETTSFSARSQ*PTQQFQ Trigger: TTGGAATTGCTGCGTGGGGCATTGGCTTCGGGCTGA...GAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGGTCATTTCGAGCACTTaGCGTATTGTTCCAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: GQCPTMNTVNSRCHRASEVISST*RIVPTN Trigger: GTTGGTTGGAACAATACGGCAAGTGCTCGAAATGAC...CTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCTTCTCATCAAAGGAATaGACTAGGATTCGCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCFSSKE*TRIRAG Trigger: CCCCGCGCGAATCCTAGTGCATTCCTTTGATGAGAA...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | ACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAGGTTCCCTGACAGCTaGTTTGTCCTTGCCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TMNTVNSRCHRASETTSFRFPDS*FVLAFG Trigger: CCCAAAGGCAAGGACAAAGCAGCTGTCAGGGAACCT...GAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | GATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTTCTGCAGGTAAAAGATGCCCACTGCAATaGCCACGCCGACCACTCGGA | + |
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Preference number: 4 (lower is better) Translates to: DSPYNQHSGTIQSFSAGKRCPLQ*PRRPLG Trigger: TCCGAGTGGTCGGCGTGGTCATTGCAGTGGGCATCT...TTTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | AATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAACTTGGAACCTGTGGTTaGCGGCAGCTGCACGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: NEYSKFQVPPSFRDHKFQLGTCG*RQLHVN Trigger: ATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAG...TTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | ACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGAAAAACCATCTTGGAACCTGTaGTTGCCGGCAGCTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: TELQRPQVSNIFQQRKEKPSWNL*LPAAAR Trigger: ACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGG...TTTTTCTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGTTTCCTTCCTTAAACTaGCAAATGGAGCTTAACAGA | + |
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Preference number: 4 (lower is better) Translates to: GQCPTMNTVNSRCHRASEFPSLN*QMELNR Trigger: TCTGTTAAGCTCCATTTGCCAGTTTAAGGAAGGAAA...CTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | GATGTACGTTCAGATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTAGGTGTAAAGCAGGTTaGGGGCGCACAGGCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DVRSDSPYNQHSGTIQSFRCKAG*GRTGSS Trigger: AGAACTGCCTGTGCGCCCTCAACCTGCTTTACACCT...AAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATCTGAACGTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | GTGCCACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGATATTCTCCTATGATTaGAGCACATGGCGAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: VPPSFRDHKFQIFFSNGKIFSYD*STWRAR Trigger: TCGTGCTCGCCATGTGCTCCAATCATAGGAGAATAT...CTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | GATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTTCTGCAGGTAAACAGCATATTCTCCTATaGTTGGAGCACATGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: DSPYNQHSGTIQSFSAGKQHILL*LEHMAS Trigger: GCTCGCCATGTGCTCCAATCATAGGAGAATATGCTG...TTTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | GATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTTCTGCAGGTAAAGGCCACAGTGGACAGTaGCCGACAATGAATACAGTA | + |
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Preference number: 4 (lower is better) Translates to: DSPYNQHSGTIQSFSAGKGHSGQ*PTMNTV Trigger: TACTGTATTCATTGTCGGGCACTGTCCACTGTGGCC...TTTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | ACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGAAAAATATGATTGGAGCACATaGCGAGCACGAGTGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: TELQRPQVSNIFQQRKEKYDWST*RARVVT Trigger: AGTGACCACTCGTGCTCGCCATGTGCTCCAATCATA...TTTTTCTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | CATATAACCAACACAGTGGTACCATACAAAGTTTTTCTGCAGGTAAAAATGCTAACAGTAAATTCCAGGTaGCACCGAGCTTCAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: HITNTVVPYKVFLQVKMLTVNSR*HRASET Trigger: GGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGT...TAGCATTTTTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTTATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR GCA 90 bp | ACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAATCAAATATCTTTTTaGTACGTGGGCCAACGCATT | + |
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Preference number: 4 (lower is better) Translates to: TMNTVNSRCHRASETTSFNQISF*YVGQRI Trigger: AATGCGTTGGCCCACGTAGCAAAAAGATATTTGATT...GAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | GTGCCACCGAGCTTCAGAGACCACAAGTTTCAAATATTTTTCAGCAACGGAAAGTATCTTTTTGCTACGTaGGCCAACGCATTAATACTA | + |
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Preference number: 4 (lower is better) Translates to: VPPSFRDHKFQIFFSNGKYLFAT*ANALIL Trigger: TAGTATTAATGCGTTGGCCCACGTAGCAAAAAGATA...CTTTCCGTTGCTGAAAAATATTTGAAACTTGTGGTCTCTGAAGCTCGGTGGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | AATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAACAGTTTAGATTTCTCTaGATGTCATTTCGAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: NEYSKFQVPPSFRDHKFQQFRFL*MSFRAL Trigger: AAGTGCTCGAAATGACATCCAGAGAAATCTAAACTG...TTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CCA 90 bp | CATATAACCAACACAGTGGTACCATACAAAGTTTTTCTGCAGGTAAAAATGCTACAGACAGGTGTCATTTaGGTTAACACTTCGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: HITNTVVPYKVFLQVKMLQTGVI*VNTSEP Trigger: GGGTTCCGAAGTGTTAACCCAAATGACACCTGTCTG...TAGCATTTTTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTTATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR TCA 90 bp | GATGTACGTTCAGATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTAAACTCGTTCCATTCTaGTGGAGGCTGAAGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: DVRSDSPYNQHSGTIQSFKLVPF*WRLKVN Trigger: ATTTACCTTCAGCCTCCATCAGAATGGAACGAGTTT...AAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATCTGAACGTACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS TCA 90 bp | GGTTGCCGGCAGCTGCACGTAAATTCGACTCCGGCGGAGGTTCCCTaGCAGCTGCTTTGTCCTTGCCTTTGGGGCCTGGCCCAGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GCRQLHVNSTPAEVP*QLLCPCLWGLAQAG Trigger: CCCCGCCTGGGCCAGGCCCCAAAGGCAAGGACAAAGCAGCTGTCAGGGAACCTCCGCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CAA 90 bp | CAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCCGGCTCGGACCCGCTTaGGAACCTGCGGCCGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: QWTVPDNEYSKFQVPPSFRLGPA*EPAAAA Trigger: TGCGGCGGCCGCAGGTTCCAAAGCGGGTCCGAGCCG...GAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 90 bp | CGCACAGGCAGTTCTTGGAACACGCGAAGCCCCCGCAAACCATCTTaGAACCTGTGGTTGCCGGCAGCTGCACGTAAATTCGACTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: RTGSSWNTRSPRKPS*NLWLPAAARKFDSG Trigger: GCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGTGTTCCAAGAACTGCCTGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 90 bp | AGTTCTTGGAACACGCGAAGCCCCCGCAAACCATCTTGGAACCTGTaGTTGCCGGCAGCTGCACGTAAATTCGACTCCGGCGGAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSWNTRSPRKPSWNL*LPAAARKFDSGGGS Trigger: GGAACCTCCGCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGTGTTCCAAGAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CAA 90 bp | GGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGCCCCCGCAAACCATCTaGGAACCTGTGGTTGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: GQCPTMNTVNSRCHRASEPPQTI*EPVVAG Trigger: GCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGG...CTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS TCA 90 bp | TCAGACCCACTAAAGCAATCAGGAACAAGAAGATGCCCACTGCAATaGCCACGCCGACCACTCGGAGACTGGAAATCAGCCCGAAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SDPLKQSGTRRCPLQ*PRRPLGDWKSARSQ Trigger: TTGGCTTCGGGCTGATTTCCAGTCTCCGAGTGGTCGGCGTGGTCATTGCAGTGGGCATCTTCTTGTTCCTGATTGCTTTAGTGGGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS-3UTR CAA 90 bp | GATGTACGTTCAGATTCACCATATAACCAACACAGTGGTACCATACAAAGTTTTGCTTTGTCCTTGCCTTaGGGGCCTGGCCCAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: DVRSDSPYNQHSGTIQSFALSLP*GPGPGG Trigger: CCCGCCTGGGCCAGGCCCCAAAGGCAAGGACAAAGC...AAAACTTTGTATGGTACCACTGTGTTGGTTATATGGTGAATCTGAACGTACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCCGAGCACTTGCCGTATaGTTCCAACCAACCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCRALAV*FQPTSR Trigger: TCTGGAGGTTGGTTGGAACAATACGGCAAGTGCTCG...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 90 bp | GCCACCAACAAATCTCAAAACCTCTCCAGCATATTCTCCTATGATTaGAGCACATGGCGAGCACGAGTGGTCACTTTTAACACAGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: ATNKSQNLSSIFSYD*STWRARVVTFNTAS Trigger: GCTAGCTGTGTTAAAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATATGCTGGAGAGGTTTTGAGATTTGTTGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 90 bp | AAATCTCAAAACCTCTCCAGCATATTCTCCTATGATTGGAGCACATaGCGAGCACGAGTGGTCACTTTTAACACAGCTAGCCAGACAGGT | + |
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Preference number: 5 (lower is better) Translates to: KSQNLSSIFSYDWST*RARVVTFNTASQTG Trigger: ACCTGTCTGGCTAGCTGTGTTAAAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATATGCTGGAGAGGTTTTGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 90 bp | TCATTTGGGTTAACACTTCGGAACCCACAGCAGTTTAGATTTCTCTaGATGTCATTTCGAGCACTTGCCGTATTGTTCCAACCAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SFGLTLRNPQQFRFL*MSFRALAVLFQPTS Trigger: GGAGGTTGGTTGGAACAATACGGCAAGTGCTCGAAATGACATCCAGAGAAATCTAAACTGCTGTGGGTTCCGAAGTGTTAACCCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGCCACAGTGGACAGTGCCCGACAATGAATACAGTAAATTCCAGGTGCGAAACCACTTCTCCTTaGCACTTACCTGTAAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KKGHSGQCPTMNTVNSRCETTSP*HLPVKV Trigger: GACTTTTACAGGTAAGTGCAAAGGAGAAGTGGTTTC...GCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGCCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS-3UTR CAA 90 bp | AATGAATACAGTAAATTCCAGGTGCCACCGAGCTTCAGAGACCACAAGTTTCAATGTCATTTCGAGCACTaGCCGTATTGTTCCAACCAA | + |
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Preference number: 5 (lower is better) Translates to: NEYSKFQVPPSFRDHKFQCHFEH*PYCSNQ Trigger: TTGGTTGGAACAATACGGCAAGTGCTCGAAATGACA...TTGAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTACTGTATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS GCA 90 bp | ATCATAATACGAAAGGAAATCTTCCTTGTTTTCTCATCAAAGGAATaGACTAGGATTCGCGCGGGGGTCTTTCTGGTTCCTGTATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: IIIRKEIFLVFSSKE*TRIRAGVFLVPVSV Trigger: TACAGATACAGGAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTTGATGAGAAAACAAGGAAGATTTCCTTTCGTATTATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS TCA 90 bp | CTAACCAAACAAAAACTTCCAGATGCCAAGCTCGGTCCAACATATTaGTCTCTTCAAATGGACATCACCTATCTTTCCTTCAAAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LTKQKLPDAKLGPTY*SLQMDITYLSFKAQ Trigger: TTGGGCTTTGAAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCATCTGGAAGTTTTTGTTTGGTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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| CDS CCA 90 bp | AACTTCCAGATGCCAAGCTCGGTCCAACATATTGATCTCTTCAAATaGACATCACCTATCTTTCCTTCAAAGCCCAAATGCACTGTAATT | + |
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Preference number: 5 (lower is better) Translates to: NFQMPSSVQHIDLFK*TSPIFPSKPKCTVI Trigger: AATTACAGTGCATTTGGGCTTTGAAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCATCTGGAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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| CDS CAA 90 bp | TTCGACTCCGGCGGAGGTTCCCTGACAGCTGCTTTGTCCTTGCCTTaGGGGCCTGGCCCAGGCGGGGCAGCAACGCAGACGTGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FDSGGGSLTAALSLP*GPGPGGAATQTWVG Trigger: CCCCACCCACGTCTGCGTTGCTGCCCCGCCTGGGCCAGGCCCCAAAGGCAAGGACAAAGCAGCTGTCAGGGAACCTCCGCCGGAGTCGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CAA 90 bp | GCTGCACGTAAATTCGACTCCGGCGGAGGTTCCCTGACAGCTGCTTaGTCCTTGCCTTTGGGGCCTGGCCCAGGCGGGGCAGCAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: AARKFDSGGGSLTAA*SLPLGPGPGGAATQ Trigger: CTGCGTTGCTGCCCCGCCTGGGCCAGGCCCCAAAGGCAAGGACAAAGCAGCTGTCAGGGAACCTCCGCCGGAGTCGAATTTACGTGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS GCA 72 bp | CGCGAAGCCCCCGCAAACCATCTTGGAACCTGTGGTTaGCGGCAGCTGCACGTAAATTCGACTCCGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: REAPANHLGTCG*RQLHVNSTPAE Trigger: CTCCGCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS TCA 72 bp | CAGCTGCACGTAAATTCGACTCCGGCGGAGGTTCCCTaGCAGCTGCTTTGTCCTTGCCTTTGGGGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLHVNSTPAEVP*QLLCPCLWGLA Trigger: GGCCAGGCCCCAAAGGCAAGGACAAAGCAGCTGTCAGGGAACCTCCGCCGGAGTCGAATTTACGTGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CAA 72 bp | ACGCGAAGCCCCCGCAAACCATCTTGGAACCTGTGGTaGCCGGCAGCTGCACGTAAATTCGACTCCGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: TRSPRKPSWNLW*PAAARKFDSGG Trigger: TCCGCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CAA 90 bp | TCTTGGAACACGCGAAGCCCCCGCAAACCATCTTGGAACCTGTGGTaGCCGGCAGCTGCACGTAAATTCGACTCCGGCGGAGGTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SWNTRSPRKPSWNLW*PAAARKFDSGGGSL Trigger: CAGGGAACCTCCGCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGTGTTCCAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 72 bp | AACACGCGAAGCCCCCGCAAACCATCTTGGAACCTGTaGTTGCCGGCAGCTGCACGTAAATTCGACTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: NTRSPRKPSWNL*LPAAARKFDSG Trigger: GCCGGAGTCGAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 72 bp | AGTTCTTGGAACACGCGAAGCCCCCGCAAACCATCTTaGAACCTGTGGTTGCCGGCAGCTGCACGTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SSWNTRSPRKPS*NLWLPAAARKF Trigger: GAATTTACGTGCAGCTGCCGGCAACCACAGGTTCCAAGATGGTTTGCGGGGGCTTCGCGTGTTCCAAGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS TCA 72 bp | CTAAAGCAATCAGGAACAAGAAGATGCCCACTGCAATaGCCACGCCGACCACTCGGAGACTGGAAATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LKQSGTRRCPLQ*PRRPLGDWKSA Trigger: GGCTGATTTCCAGTCTCCGAGTGGTCGGCGTGGTCATTGCAGTGGGCATCTTCTTGTTCCTGATTGCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS CCA 72 bp | TATTCTCCTATGATTGGAGCACATGGCGAGCACGAGTaGTCACTTTTAACACAGCTAGCCAGACAGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YSPMIGAHGEHE*SLLTQLARQVS Trigger: TGACACCTGTCTGGCTAGCTGTGTTAAAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS CCA 72 bp | AACCTCTCCAGCATATTCTCCTATGATTGGAGCACATaGCGAGCACGAGTGGTCACTTTTAACACAGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: NLSSIFSYDWST*RARVVTFNTAS Trigger: GCTAGCTGTGTTAAAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATATGCTGGAGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS TCA 72 bp | CAACAAATCTCAAAACCTCTCCAGCATATTCTCCTATaGTTGGAGCACATGGCGAGCACGAGTGGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: QQISKPLQHILL*LEHMASTSGHF Trigger: AAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATATGCTGGAGAGGTTTTGAGATTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 72 bp | AAATCTCAAAACCTCTCCAGCATATTCTCCTATGATTaGAGCACATGGCGAGCACGAGTGGTCACTTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: KSQNLSSIFSYD*STWRARVVTFN Trigger: GTTAAAAGTGACCACTCGTGCTCGCCATGTGCTCCAATCATAGGAGAATATGCTGGAGAGGTTTTGAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262067.5 |
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| CDS CCA 72 bp | TTAACACTTCGGAACCCACAGCAGTTTAGATTTCTCTaGATGTCATTTCGAGCACTTGCCGTATTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LTLRNPQQFRFL*MSFRALAVLFQ Trigger: TTGGAACAATACGGCAAGTGCTCGAAATGACATCCAGAGAAATCTAAACTGCTGTGGGTTCCGAAGTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262067.5 ENST00000466195.1 |
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| CDS CCA 72 bp | ATGCCAAGCTCGGTCCAACATATTGATCTCTTCAAATaGACATCACCTATCTTTCCTTCAAAGCCCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: MPSSVQHIDLFK*TSPIFPSKPKC Trigger: GCATTTGGGCTTTGAAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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| CDS TCA 72 bp | CAAAAACTTCCAGATGCCAAGCTCGGTCCAACATATTaGTCTCTTCAAATGGACATCACCTATCTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QKLPDAKLGPTY*SLQMDITYLSF Trigger: GAAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCATCTGGAAGTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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| CDS CAA 90 bp | ACTAACCAAACAAAAACTTCCAGATGCCAAGCTCGGTCCAACATATaGATCTCTTCAAATGGACATCACCTATCTTTCCTTCAAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TNQTKTSRCQARSNI*ISSNGHHLSFLQSP Trigger: TGGGCTTTGAAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCATCTGGAAGTTTTTGTTTGGTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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| CDS CAA 72 bp | ACAAAAACTTCCAGATGCCAAGCTCGGTCCAACATATaGATCTCTTCAAATGGACATCACCTATCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TKTSRCQARSNI*ISSNGHHLSFL Trigger: AAGGAAAGATAGGTGATGTCCATTTGAAGAGATCAATATGTTGGACCGAGCTTGGCATCTGGAAGTTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466195.1 |
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