RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSPAN11 (Homo sapiens)

Ensembl gene IDs: ENSG00000110900

Ensembl transcript IDs: ENST00000261177.10, ENST00000535215.5, ENST00000545802.1, ENST00000546076.6

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGTCACCCAGGGGACTCGGGGACGCGCCCTTCTCTTGGTGTCTaGCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: TGHPGDSGTRPSLGV*PCELREGQHGVCRA
Trigger: TGCCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCCCCGAGTCCCCTGGGTGACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp CCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATaGAGTGTGCAGGGCAAGAACGTGCCCGTGCCAGCTGGGTGGGAT +
Preference number: 1 (lower is better)
Translates to: PFSWCLPLRAQGRAA*SVQGKNVPVPAGWD
Trigger: ATCCCACCCAGCTGGCACGGGCACGTTCTTGCCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp GAGATTCCCGAGGGGCGTATCACTAGAGGCCAGGGCTTGGGGCCATaGTCTCCCAGGGAGGTTTCTCCCAGGAAGGCAGCTAGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: EIPEGRITRGQGLGP*SPREVSPRKAARQV
Trigger: CACCTGCCTAGCTGCCTTCCTGGGAGAAACCTCCCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGTGATACGCCCCTCGGGAATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 90 bp TCCAACCCGTCAGCCAAGGCCACGTTTCATTCTTGCCTGCTGTCCTaGCACAGGTCACCCAGGGGACTCGGGGACGCGCCCTTCTCTTGG +
Preference number: 1 (lower is better)
Translates to: SNPSAKATFHSCLLS*HRSPRGLGDAPFSW
Trigger: CCAAGAGAAGGGCGCGTCCCCGAGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGACGGGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp CGGAACAGGAGATTCCCGAGGGGCGTATCACTAGAGGCCAGGGCTTaGGGCCATGGTCTCCCAGGGAGGTTTCTCCCAGGAAGGCAGCTA +
Preference number: 1 (lower is better)
Translates to: RNRRFPRGVSLEARA*GHGLPGRFLPGRQL
Trigger: TAGCTGCCTTCCTGGGAGAAACCTCCCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGTGATACGCCCCTCGGGAATCTCCTGTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp GGCCATGAGCTGACCATGGTGACACGCTTCACTCCTAGCCCCCAATaGTGGAGCGAGTCGGGAATCTCGGCTGCTGCAGGTGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: GHELTMVTRFTPSPQ*WSESGISAAAGGAQ
Trigger: CTGAGCTCCACCTGCAGCAGCCGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGTGAAGCGTGTCACCATGGTCAGCTCATGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 90 bp GCACCTGATGCTGCTTTCCTAGGGCCCTGGTGTGCAGGGGCCTTTTaGCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: APDAAFLGPWCAGAF*LHGTEGDIPQACPL
Trigger: GAGAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTGCACACCAGGGCCCTAGGAAAGCAGCATCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp CATGAGCTGACCATGGTGACACGCTTCACTCCTAGCCCCCAATGGTaGAGCGAGTCGGGAATCTCGGCTGCTGCAGGTGGAGCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: HELTMVTRFTPSPQW*SESGISAAAGGAQL
Trigger: CAGCTGAGCTCCACCTGCAGCAGCCGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGTGAAGCGTGTCACCATGGTCAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 90 bp CCAGGCTTCTGCACCCCCGGCCCATGTGCCATGGGTGCTGCTTTGTaGCAGTGCCCCCTGAGTGACACTCTGTTCCTTAATGACAGCCTG +
Preference number: 1 (lower is better)
Translates to: PGFCTPGPCAMGAAL*QCPLSDTLFLNDSL
Trigger: CAGGCTGTCATTAAGGAACAGAGTGTCACTCAGGGGGCACTGTCACAAAGCAGCACCCATGGCACATGGGCCGGGGGTGCAGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp CCCAGGACTGGCCTAGGTCAGCAATGTGCTCATCACAGTGCAATCTaGATCAAGCAGGGAGGTGAGCTGGGACCTCGCTCAGCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: PRTGLGQQCAHHSAI*IKQGGELGPRSALA
Trigger: GGCCAAGGCTGAGCGAGGTCCCAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACCTAGGCCAGTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 90 bp ACAAATATTCCAACCCGTCAGCCAAGGCCACGTTTCATTCTTGCCTaGTGTCCTGACACAGGTCACCCAGGGGACTCGGGGACGCGCCCT +
Preference number: 1 (lower is better)
Translates to: TNIPTRQPRPRFILA*CPDTGHPGDSGTRP
Trigger: AGGGCGCGTCCCCGAGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGACGGGTTGGAATATTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 90 bp CTTCTCCAGCCTCAAAACCCTGAAGAGGGCCCAAGTAGCAGATTCTaGAACAAAGCTGGCTCCAAGGCAAGAGGGCCCCGAGGCACATCA +
Preference number: 1 (lower is better)
Translates to: LLQPQNPEEGPSSRF*NKAGSKARGPRGTS
Trigger: TGATGTGCCTCGGGGCCCTCTTGCCTTGGAGCCAGCTTTGTTTCAGAATCTGCTACTTGGGCCCTCTTCAGGGTTTTGAGGCTGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 90 bp ACAAGGAGGTCAGATTTCCAAGCCCTGGGTTGTTCTACCACTGTCTaGCGCTTGGACAAGCCATCTTTCAAGAGGCAGTCTGGCTGGACG +
Preference number: 1 (lower is better)
Translates to: TRRSDFQALGCSTTV*RLDKPSFKRQSGWT
Trigger: CGTCCAGCCAGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACCTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp GGTCAGATTTCCAAGCCCTGGGTTGTTCTACCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGAGGCAGTCTGGCTGGACGACACACA +
Preference number: 1 (lower is better)
Translates to: GQISKPWVVLPLSAA*TSHLSRGSLAGRHT
Trigger: TGTGTGTCGTCCAGCCAGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 90 bp CCAATTACCCAGATGATTGCTTCAAGTGGACAGACTACACTCCTCTaGAAGACCTCACCCAGGCAGGCTCCTGAGGAGAGTTGCCATAGA +
Preference number: 1 (lower is better)
Translates to: PITQMIASSGQTTLL*KTSPRQAPEESCHR
Trigger: TCTATGGCAACTCTCCTCAGGAGCCTGCCTGGGTGAGGTCTTCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTGGGTAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR TCA 90 bp CTCCGACTTTGCAGGGTTGCGAGTTGGTCCACTCCAGGAGATGTTTaGCACCCATCAACATTAGGTGCTGAAGATGGTCTGAAACCTGGT +
Preference number: 1 (lower is better)
Translates to: LRLCRVASWSTPGDV*HPSTLGAEDGLKPG
Trigger: ACCAGGTTTCAGACCATCTTCAGCACCTAATGTTGATGGGTGTCAAACATCTCCTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 90 bp ACCCTGAAAACTCAGACATGTCCCCCACTTCTGCATTTGCCTTTCTaGGATGCTTCTAAGACTCTGTCAAGTGTCTTCTCCCTCACCATG +
Preference number: 1 (lower is better)
Translates to: TLKTQTCPPLLHLPF*DASKTLSSVFSLTM
Trigger: CATGGTGAGGGAGAAGACACTTGACAGAGTCTTAGAAGCATCTCAGAAAGGCAAATGCAGAAGTGGGGGACATGTCTGAGTTTTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR TCA 90 bp GTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATaGTTGCTTCAAGTGGACAGACTACACTCCTCTGGAAGACCTCAC +
Preference number: 1 (lower is better)
Translates to: VYFWELMVFCSQLPR*LLQVDRLHSSGRPH
Trigger: GTGAGGTCTTCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR GCA 90 bp GGCAGCAATGCTAATCACGCACTATACCATTTCTCTCGGCCTCTGTaGAGTCTGGGATATCTGGTCTTCGTTTTAATGAATTTGCATTGG +
Preference number: 1 (lower is better)
Translates to: GSNANHALYHFSRPL*SLGYLVFVLMNLHW
Trigger: CCAATGCAAATTCATTAAAACGAAGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGATTAGCATTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 90 bp AGGATTTTCTTTCTGTTCTCCCTTATTACTGGGGAAAGTTCTTCCTaGAAATTCCGCAAATTCCCTGCTGAACTTAGTGATGCAAGAGAG +
Preference number: 1 (lower is better)
Translates to: RIFFLFSLITGESSS*KFRKFPAELSDARE
Trigger: CTCTCTTGCATCACTAAGTTCAGCAGGGAATTTGCGGAATTTTCAGGAAGAACTTTCCCCAGTAATAAGGGAGAACAGAAAGAAAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGGGCCGAGGGTCTCTaGCTGGGTGGGCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGGAEGL*LGGHRS
Trigger: GCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCCCC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCCTAGGGCCCTGGTGTaGAGGGGCCTTTTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMPRALV*RGLLPA
Trigger: TGCAGGCAAAAGGCCCCTGCACACCAGGGCCCTAGG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCAGAGCTGGACCCCCTaGAAGCAGTGTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCQSWTP*KQCGGG
Trigger: GCCACCACCACACTGCTTCCAGGGGGTCCAGCTCTG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGACTGCCGCCTCCCCCTaGCACCTCGGCAGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGTAASP*HLGRKN
Trigger: GTTCTTCCTGCCGAGGTGCCAGGGGGAGGCGGCAGT...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGGGGGGAATCCCGTGCTaGATGCAGGAGTGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLGGIPC*MQECRG
Trigger: ACCCCGGCACTCCTGCATTCAGCACGGGATTCCCCC...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 90 bp CCGGAACAGGAGATTCCCGAGGGGCGTATCACTAGAGGCCAGGGCTaGGGGCCATGGTCTCCCAGGGAGGTTTCTCCCAGGAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PEQEIPEGRITRGQG*GPWSPREVSPRKAA
Trigger: AGCTGCCTTCCTGGGAGAAACCTCCCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGTGATACGCCCCTCGGGAATCTCCTGTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGAGCACTGGGTGGCCTTaGGGCCACTCCTATGTATGG +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMSTGWP*GHSYVW
Trigger: CCATACATAGGAGTGGCCTCAAGGCCACCCAGTGCT...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGGGCCCGGGAGGAATTaGCCTGGGTATGGATCTGTA +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMGPGRN*PGYGSV
Trigger: TACAGATCCATACCCAGGTCAATTCCTCCCGGGCCC...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTGGGATCCCAGCACCTaGTGCTGCTTTCCTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGWDPST*CCFPRA
Trigger: GGCCCTAGGAAAGCAGCATCAGGTGCTGGGATCCCA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCAGGGGCACACCCCGCTaGGGACCACATCGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLRGTPR*GPHRWL
Trigger: GAGCCAACGATGTGGTCCCCAGCGGGGTGTGCCCCT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGGTCTCTGCCTGGGTaGGCACAGAAGCTATGGTCT +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGGSLPG*AQKLWS
Trigger: AGACCATAGCTTCTGTGCCCACCCAGGCAGAGACCC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCCAGGGCTTCTGGGCATaGGTGGGGGAATCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPQGFWA*VGESRA
Trigger: AGCACGGGATTCCCCCACCCATGCCCAGAAGCCCTG...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCCAGAGCTGGACCCCCTaGAAGCAGTGTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLQSWTP*KQCGGG
Trigger: GCCACCACCACACTGCTTCCAGGGGGTCCAGCTCTG...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCCGCCTGCCCCAGGACTaGCCTAGGTCAGCAATGTGC +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLRLPQD*PRSAMC
Trigger: GCACATTGCTGACCTAGGCCAGTCCTGGGGCAGGCG...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGAGTTCAGGGCTCTGTTaGGGTCAGCACTGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLSSGLC*GQHWVA
Trigger: GGCCACCCAGTGCTGACCCCAACAGAGCCCTGAACT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTGTGCAGGGGCCTTTTaGCTGCACGGGACTGAAGGT +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLCAGAF*LHGTEG
Trigger: ACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTGCACA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCTGCAGGCCTTGCAGATaGCATGTGGCCACATGTTGT +
Preference number: 2 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCCRPCR*HVATCC
Trigger: ACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCAAGGTCAGGGCTTCTaGGCATGGGTGGGGGAATCC +
Preference number: 2 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQQGQGF*AWVGES
Trigger: GGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCAGCATGTGCTGGTATaGCCACCTTACCCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGQHVLV*PPYPLL
Trigger: AAGCAGGGGGTAAGGTGGCCATACCAGCACATGCTG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCGTGCCCGTGCCAGCTaGGTGGGATCCCAGCACCTG +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYRARAS*VGSQHL
Trigger: CAGGTGCTGGGATCCCACCCAGCTGGCACGGGCACG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCCTGGGGTGACGGGCTaGGTGGTCGTCACGGGCCTT +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYPGVTG*VVVTGL
Trigger: AAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCCGACTTTGCAGGGTTaGGAGTTGGTCCACTCCAGG +
Preference number: 2 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQPTLQG*ELVHSR
Trigger: CCTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCTTGCAGATGGCATGTaGCCACATGTTGTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMLADGM*PHVVLR
Trigger: CCTCAAGACAACATGTGGCCACATGCCATCTGCAAG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGGGTCTCTGCCTGGGTaGGCACAGAAGCTATGGTCT +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLGSLPG*AQKLWS
Trigger: AGACCATAGCTTCTGTGCCCACCCAGGCAGAGACCC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGCTTCTGGGCATGGGTaGGGGAATCCCGTGCTGAAT +
Preference number: 2 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQASGHG*GNPVLN
Trigger: ATTCAGCACGGGATTCCCCCACCCATGCCCAGAAGC...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCAAGAGGCAGTCTGGCTaGACGACACACAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLKRQSG*TTHRAG
Trigger: TCCTGCCCTGTGTGTCGTCCAGCCAGACTGCCTCTT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGA +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMPLSAA*TSHLSR
Trigger: TCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATAGGGGCACACCCCGCTaGGGACCACATCGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYRGTPR*GPHRWL
Trigger: GAGCCAACGATGTGGTCCCCAGCGGGGTGTGCCCCT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAATTGACCTGGGTATaGATCTGTACCCTCGTCAGC +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMELTWV*ICTLVS
Trigger: GCTGACGAGGGTACAGATCCATACCCAGGTCAATTC...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 90 bp CGGTCACAAATATTCCAACCCGTCAGCCAAGGCCACGTTTCATTCTaGCCTGCTGTCCTGACACAGGTCACCCAGGGGACTCGGGGACGC +
Preference number: 2 (lower is better)
Translates to: RSQIFQPVSQGHVSF*PAVLTQVTQGTRGR
Trigger: GCGTCCCCGAGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGACGGGTTGGAATATTTGTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGGCTCTGGTTGTCTCCTaGAAGGATCATTTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLALVVS*KDHFPA
Trigger: GGCAGGGAAATGATCCTTTCAGGAGACAACCAGAGC...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGGGGGCCGAGGGTCTCTaGCTGGGTGGGCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGGAEGL*LGGHRS
Trigger: GCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCCCC...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTCAATGATAAGGCTGTaGACAGGGCACCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLSMIRL*TGHLPV
Trigger: GACAGGCAGGTGCCCTGTGCACAGCCTTATCATTGA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCCCTGGTGAGGGGCTCTaGTTGTCTCCTGAAAGGATC +
Preference number: 2 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPPGEGL*LSPERI
Trigger: GATCCTTTCAGGAGACAACCAGAGCCCCTCACCAGG...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGAGTGCCGGGGTTCCTaGGTTTTCTGCCGATTGTTC +
Preference number: 2 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPECRGS*VFCRLF
Trigger: GAACAATCGGCAGAAAACCCAGGAACCCCGGCACTC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGCCTCTGTGCAGTCTaGGATATCTGGTCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGGLCAV*DIWSSF
Trigger: AAACGAAGACCAGATATCCCAGACTGCACAGAGGCC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGACGCGCCCTTCTCTTaGTGTCTGCCCCTGCGAGCT +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYDAPFS*CLPLRA
Trigger: AGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTGCCCCCGTTCCTGGTaGGGGGCTCTGGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGCPRSW*GALVVS
Trigger: GGAGACAACCAGAGCCCCTCACCAGGAACGGGGGCA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGATCAACATTAGGTGCTaGAGATGGTCTGAAACCTGG +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMINIRC*RWSETW
Trigger: CCAGGTTTCAGACCATCTTCAGCACCTAATGTTGAT...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATTCTTGCCTGCTGTCCTaGCACAGGTCACCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYSCLLS*HRSPRG
Trigger: TCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGA...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCAAAGGATCATTTCCCTaGCCAGGATCTGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPKGSFP*PGSGHG
Trigger: CCCATGGCCAGATCCTGGGCAGGGAAATGATCCTTT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTTACCCCCTGCTTCCTaGCAGGGCGGCTCTACCCAG +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELLPPAS*QGGSTQ
Trigger: CTGGGTAGAGCCGCCCTGGCAGGAAGCAGGGGGTAA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGATGTGCTCATCACAGTaGAATCTGGATCAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGMCSSQ*NLDQAG
Trigger: CCCTGCTTGATCCAGATTGCACTGTGATGAGCACAT...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCCTAGGTCAGCAATGTaGTCATCACAGTGCAATCTG +
Preference number: 2 (lower is better)
Translates to: LLVSAPASSGKGSMECAGPRSAM*SSQCNL
Trigger: CAGATTGCACTGTGATGAGCACATTGCTGACCTAGG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATAATAAGCCAGGCTTCTaGACCCCCGGCCCATGTGCC +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYNKPGF*TPGPCA
Trigger: GGCACATGGGCCGGGGGTGCAGAAGCCTGGCTTATT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCCCTGGTGAGGGGCTCTaGTTGTCTCCTGAAAGGATC +
Preference number: 2 (lower is better)
Translates to: FPETARSGLLGMGGGIPCPGEGL*LSPERI
Trigger: GATCCTTTCAGGAGACAACCAGAGCCCCTCACCAGG...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCCCCTGGAAGCAGTGTaGTGGTGGCTACGGGGTCAA +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYPLEAV*WWLRGQ
Trigger: TTGACCCCGTAGCCACCACCACACTGCTTCCAGGGG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATTGTTGGGGTCAGCACTaGGTGGCCTTGAGGCCACTC +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYCWGQH*VALRPL
Trigger: GAGTGGCCTCAAGGCCACCCAGTGCTGACCCCAACA...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGA +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLPLSAA*TSHLSR
Trigger: TCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTTACCCCCTGCTTCCTaGCAGGGCGGCTCTACCCAG +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGLPPAS*QGGSTQ
Trigger: CTGGGTAGAGCCGCCCTGGCAGGAAGCAGGGGGTAA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCAAGGTCAGGGCTTCTaGGCATGGGTGGGGGAATCC +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELQGQGF*AWVGES
Trigger: GGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCCACATCGTTGGCTCTaGACTCCAACCATTGTACAC +
Preference number: 2 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQPHRWL*TPTIVH
Trigger: GTGTACAATGGTTGGAGTCCAGAGCCAACGATGTGG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGAATGCCAGCCCTCCCTaGCCCACCCCATGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELNASPP*PTPCFF
Trigger: GAAAAAGCATGGGGTGGGGCAGGGAGGGCTGGCATT...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCAGTTTTTGATTATCTaGATGAATCCCAGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: GRALLLVSAPASSGKGSMQFLII*MNPRRL
Trigger: CAACCTCCTGGGATTCATGCAGATAATCAAAAACTG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATATAGCAGGTGCCCCATaGAGGGGGCTAGAAAGAAGG +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYIAGAP*RGLERR
Trigger: CCTTCTTTCTAGCCCCCTGCATGGGGCACCTGCTAT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCTTGCAGATGGCATGTaGCCACATGTTGTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGLADGM*PHVVLR
Trigger: CCTCAAGACAACATGTGGCCACATGCCATCTGCAAG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGTTCTCCCTTATTACTaGGGAAAGTTCTTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCVLPYY*GKFFLK
Trigger: TTTCAGGAAGAACTTTCCCCAGTAATAAGGGAGAAC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTAGCAGGGAGGTGAGCTaGGACCTCGCTCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSSREVS*DLAQPW
Trigger: CCAAGGCTGAGCGAGGTCCCAGCTCACCTCCCTGCT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 90 bp AGGTCAGATTTCCAAGCCCTGGGTTGTTCTACCACTGTCTGCCGCTaGGACAAGCCATCTTTCAAGAGGCAGTCTGGCTGGACGACACAC +
Preference number: 2 (lower is better)
Translates to: RSDFQALGCSTTVCR*DKPSFKRQSGWTTH
Trigger: GTGTGTCGTCCAGCCAGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGGGGAAAGTTCTTCCTaGAAATTCCGCAAATTCCCT +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLGESSS*KFRKFP
Trigger: AGGGAATTTGCGGAATTTTCAGGAAGAACTTTCCCC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAATGCCAGCCCTCCCTaGCCCACCCCATGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGNASPP*PTPCFF
Trigger: GAAAAAGCATGGGGTGGGGCAGGGAGGGCTGGCATT...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTGGGCACAGAAGCTATaGTCTCAGGCACTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELWAQKL*SQALGG
Trigger: TCCACCGAGTGCCTGAGACCATAGCTTCTGTGCCCA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTGTTGGGGTCAGCACTaGGTGGCCTTGAGGCCACTC +
Preference number: 2 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSCWGQH*VALRPL
Trigger: GAGTGGCCTCAAGGCCACCCAGTGCTGACCCCAACA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTAGTTCAGGGCTCTGTTaGGGTCAGCACTGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSSSGLC*GQHWVA
Trigger: GGCCACCCAGTGCTGACCCCAACAGAGCCCTGAACT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 90 bp CAGGCTGTTGGCATGGACAAGGAGGTCAGATTTCCAAGCCCTGGGTaGTTCTACCACTGTCTGCCGCTTGGACAAGCCATCTTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: QAVGMDKEVRFPSPG*FYHCLPLGQAIFQE
Trigger: CTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACCTCCTTGTCCATGCCAACAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGGAAACCTGGTGTTCCTaGGAATCAGGCCCCGGAACA +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGETWCS*ESGPGT
Trigger: TGTTCCGGGGCCTGATTCTCAGGAACACCAGGTTTC...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCGTTTCATTCTTGCCTaGTGTCCTGACACAGGTCAC +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYRFILA*CPDTGH
Trigger: GTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTCAAGTGTCTTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCAGAGCATGGGTACAGCTaGCTGCAAAGCCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: VKCLLPHHGSRKPSYALSEHGYS*LQSLHS
Trigger: AGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC...TGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAAGACACTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTGCAGGCCTTGCAGATaGCATGTGGCCACATGTTGT +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELCRPCR*HVATCC
Trigger: ACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGGAGTGCCGGGGTTCCTaGGTTTTCTGCCGATTGTTC +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGECRGS*VFCRLF
Trigger: GAACAATCGGCAGAAAACCCAGGAACCCCGGCACTC...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTTAATGAATTTGCATTaGCAACCCCAGGGCCTTTTA +
Preference number: 2 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLLMNLH*QPQGLL
Trigger: TAAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAAGGATCATTTCCCTaGCCAGGATCTGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGKGSFP*PGSGHG
Trigger: CCCATGGCCAGATCCTGGGCAGGGAAATGATCCTTT...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGGTTCCTGGGTTTTCTaGCGATTGTTCCAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELGSWVF*RLFQVQ
Trigger: CTGAACCTGGAACAATCGGCAGAAAACCCAGGAACC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCTTAATGAATTTGCATTaGCAACCCCAGGGCCTTTTA +
Preference number: 2 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLLMNLH*QPQGLL
Trigger: TAAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAA...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGGTGCTGAAGATGGTCTaGAACCTGGTGTTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGVLKMV*NLVFLR
Trigger: TCTCAGGAACACCAGGTTTCAGACCATCTTCAGCAC...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGGGGAAAGTTCTTCCTaGAAATTCCGCAAATTCCCT +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYGESSS*KFRKFP
Trigger: AGGGAATTTGCGGAATTTTCAGGAAGAACTTTCCCC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGCTCCAAGAAGCCACTaGAGAACACCCAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSAPRSH*RTPREE
Trigger: CTCTTCTCTGGGTGTTCTCCAGTGGCTTCTTGGAGC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCGTGCCTCTATTCAGATaGCATGTGGTACAAACTCCA +
Preference number: 2 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFVPLFR*HVVQTP
Trigger: TGGAGTTTGTACCACATGGCATCTGAATAGAGGCAC...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CCA 90 bp GCCTTGCCATGTCTACCCATCCTAAACTCTCACATCATGGTCTTTCCCAATCTTCAGACTACACTCCTCTaGAAGACCTCACCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: ALPCLPILNSHIMVFPNLQTTLL*KTSPRQ
Trigger: CTGCCTGGGTGAGGTCTTCCAGAGGAGTGTAGTCTG...AAGATTGGGAAAGACCATGATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATTGTTGTACAAAAAGCTaGCAGCATGGATACTCTGTA +
Preference number: 2 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYCCTKS*QHGYSV
Trigger: TACAGAGTATCCATGCTGGCAGCTTTTTGTACAACA...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR TCA 90 bp AGTCAGCAGAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCCCATGGTTGATCGTTaGTCTTTGATTTGGAAGATA +
Preference number: 2 (lower is better)
Translates to: SQQSMGTAACKACTLVTLPMVDR*SLIWKI
Trigger: TATCTTCCAAATCAAAGATCAACGATCAACCATGGG...AAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTCTGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp AGTCAGCAGAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTGCTCCTGAGGAGAGTTaGCATAGAGATTATTTTCAT +
Preference number: 2 (lower is better)
Translates to: SQQSMGTAACKACTLVTLAPEES*HRDYFH
Trigger: ATGAAAATAATCTCTATGGCAACTCTCCTCAGGAGC...AAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTCTGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTACTGCATTTACTGAATaGAACCCCAACAGGCTAGAA +
Preference number: 2 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLITAFTE*NPNRLE
Trigger: TTCTAGCCTGTTGGGGTTGCATTCAGTAAATGCAGT...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CCA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTCATTGAATTGCAGCTaGGGAAGCAGATTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLISLNCS*GSRFLE
Trigger: TTCAAGGAATCTGCTTCCCCAGCTGCAATTCAATGA...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTGTTGTACAAAAAGCTaGCAGCATGGATACTCTGTA +
Preference number: 2 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSCCTKS*QHGYSV
Trigger: TACAGAGTATCCATGCTGGCAGCTTTTTGTACAACA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR GCA 90 bp TTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATGGTGGTACAAACTCCATaGCAACCTGCAGACCCAATT +
Preference number: 2 (lower is better)
Translates to: FQCLFLGTDGILLPITQMVVQTP*QPADPI
Trigger: AATTGGGTCTGCAGGTTGGCATGGAGTTTGTACCAC...CATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp CTAATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTGCCTTGCCATGTCTGCTGCCTGCAAAGCCTaGACTCTTGTCACTCTTCTA +
Preference number: 2 (lower is better)
Translates to: LMTGLFSKTLQNSCLAMSAACKA*TLVTLL
Trigger: TAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGC...AGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCATATTCAGATGCCATGTaGTACAAACTCCATGCCAAC +
Preference number: 2 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSYSDAM*YKLHAN
Trigger: GTTGGCATGGAGTTTGTACCACATGGCATCTGAATA...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR GCA 90 bp CTCCCAATTACCCAGATGATTGCTTCAAGTGGACAGACTACACTCCTCTGGAAGCTATTGTTATGTTTGTaGCTCTATTCAGATGCCATG +
Preference number: 2 (lower is better)
Translates to: LPITQMIASSGQTTLLWKLLLCL*LYSDAM
Trigger: CATGGCATCTGAATAGAGGCACAAACATAACAATAG...CTTCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTGGGTAATTGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR TCA 90 bp TTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATGGAATTCACCCATGGTTaGTCGTTGATCTTTGATTTG +
Preference number: 2 (lower is better)
Translates to: FQCLFLGTDGILLPITQMEFTHG*SLIFDL
Trigger: CAAATCAAAGATCAACGATCAACCATGGGTGAATTC...CATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR TCA 90 bp CTAATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTGCCTTGCCATGTCTGCTAGAAATTATCATTaGATTGCAGCTGGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LMTGLFSKTLQNSCLAMSARNYH*IAAGEA
Trigger: TGCTTCCCCAGCTGCAATTCAATGATAATTTCTAGC...AGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CCA 90 bp TATATATTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCACCATGAAAGGTGAATaGATTTCAGTGGAAAACAAG +
Preference number: 2 (lower is better)
Translates to: YIFQCLFLGTDGILLPITTMKGE*ISVENK
Trigger: CTTGTTTTCCACTGAAATCCATTCACCTTTCATGGT...GGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAATATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR GCA 72 bp TGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTaGAGGGCAAGAACGTGCCCGTGCCAGCTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: CPCELREGQHGV*RARTCPCQLGG
Trigger: CCCACCCAGCTGGCACGGGCACGTTCTTGCCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp CCAGGGGACTCGGGGACGCGCCCTTCTCTTGGTGTCTaGCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTG +
Preference number: 3 (lower is better)
Translates to: PGDSGTRPSLGV*PCELREGQHGV
Trigger: CACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCCCCGAGTCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGACTAGAGGCCAGGGCTaGGGGCCATGGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: GRALLLVSAPASSGKGSMTRGQG*GPWSPR
Trigger: CCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGT...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGGGACGCGCCCTTCTCTaGGTGTCTGCCCCTGCGAGC +
Preference number: 3 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLGRALL*VSAPAS
Trigger: GCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp TCGTCACGGGCCTTAGCCCTTTGGGCTCTTGGCCACTaGCTGAGCCCCTGCACCCAGAGGGTCCAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: SSRALALWALGH*LSPCTQRVQLS
Trigger: TGACAGCTGGACCCTCTGGGTGCAGGGGCTCAGGCAGTGGCCAAGAGCCCAAAGGGCTAAGGCCCGTGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp TGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATaGAGTGTGCAGGGCAAGAACGTGCCCGTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: WCLPLRAQGRAA*SVQGKNVPVPA
Trigger: AGCTGGCACGGGCACGTTCTTGCCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 72 bp TCAGCCAAGGCCACGTTTCATTCTTGCCTGCTGTCCTaGCACAGGTCACCCAGGGGACTCGGGGACGCGCCC +
Preference number: 3 (lower is better)
Translates to: SAKATFHSCLLS*HRSPRGLGDAP
Trigger: GGGCGCGTCCCCGAGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp CCCCCAATGGTGGAGCGAGTCGGGAATCTCGGCTGCTaGAGGTGGAGCTCAGCTGGACAGCCTGAGGTACTC +
Preference number: 3 (lower is better)
Translates to: PPMVERVGNLGC*RWSSAGQPEVL
Trigger: GAGTACCTCAGGCTGTCCAGCTGAGCTCCACCTGCAGCAGCCGAGATTCCCGACTCGCTCCACCATTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp GGCCGAGGGTCTCTGCCTGGGTGGGCACAGAAGCTATaGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGG +
Preference number: 3 (lower is better)
Translates to: GRGSLPGWAQKL*SQALGGFAGAR
Trigger: CCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
3UTR-3UTR CAA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCCAGGTGTGGGGTTCTaGTGTAGTGAATGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: LLVSAPASSGKGSMECAGPGVGF*CSEWAA
Trigger: GGCAGCCCATTCACTACACAAGAACCCCACACCTGG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCCAGTTCAGGGCTCTGTaGGGGTCAGCACTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLQFRAL*GSALGG
Trigger: GCCACCCAGTGCTGACCCCAACAGAGCCCTGAACTG...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp GCTGCTTTCCTAGGGCCCTGGTGTGCAGGGGCCTTTTaGCTGCACGGGACTGAAGGTGACATTCCACAGGCG +
Preference number: 3 (lower is better)
Translates to: AAFLGPWCAGAF*LHGTEGDIPQA
Trigger: CGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTGCACACCAGGGCCCTAGGAAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp CCAACCCGTCAGCCAAGGCCACGTTTCATTCTTGCCTaGTGTCCTGACACAGGTCACCCAGGGGACTCGGGG +
Preference number: 3 (lower is better)
Translates to: PTRQPRPRFILA*CPDTGHPGDSG
Trigger: CCCCGAGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGACGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp TCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTaGGGGAATCCCGTGCTGAATGCAGGAGTGCCGGGG +
Preference number: 3 (lower is better)
Translates to: SRNSKVRASGHG*GNPVLNAGVPG
Trigger: CCCCGGCACTCCTGCATTCAGCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp AACACCCAGAGAAGAGGAGGCAACCGGCCCCGAGGCTaGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: NTQRRGGNRPRG*ASLCPCGYFLC
Trigger: GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCCTCCTCTTCTCTGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp GCTTTGGGGTCAGTGTTTGTACCTGGGGTGACGGGCTaGGTGGTCGTCACGGGCCTTAGCCCTTTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: ALGSVFVPGVTG*VVVTGLSPLGS
Trigger: AGAGCCCAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACACTGACCCCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTTGCAGGGTTGCGAGTaGGTCCACTCCAGGAGATGT +
Preference number: 3 (lower is better)
Translates to: LLVSAPASSGKGSMECAGLQGCE*VHSRRC
Trigger: ACATCTCCTGGAGTGGACCAACTCGCAACCCTGCAA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 72 bp GTTCAGGGCTCTGTTGGGGTCAGCACTGGGTGGCCTTaGGGCCACTCCTATGTATGGGAGAGAGAGCACGCC +
Preference number: 3 (lower is better)
Translates to: VQGSVGVSTGWP*GHSYVWEREHA
Trigger: GGCGTGCTCTCTCTCCCATACATAGGAGTGGCCTCAAGGCCACCCAGTGCTGACCCCAACAGAGCCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp ACCATGGTGACACGCTTCACTCCTAGCCCCCAATGGTaGAGCGAGTCGGGAATCTCGGCTGCTGCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: TMVTRFTPSPQW*SESGISAAAGG
Trigger: TCCACCTGCAGCAGCCGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGTGAAGCGTGTCACCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp CTGACCATGGTGACACGCTTCACTCCTAGCCCCCAATaGTGGAGCGAGTCGGGAATCTCGGCTGCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: LTMVTRFTPSPQ*WSESGISAAAG
Trigger: ACCTGCAGCAGCCGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGTGAAGCGTGTCACCATGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATACTAGAGGCCAGGGCTaGGGGCCATGGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYTRGQG*GPWSPR
Trigger: CCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGTCCGACTTTGCAGGGTaGCGAGTTGGTCCACTCCAG +
Preference number: 3 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQSDFAG*RVGPLQ
Trigger: CTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGGA...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCTGGCCACATGTTGTCTaGAGGGGCAGTTGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPWPHVV*RGSWKR
Trigger: CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCA...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGACCACTGTCTGCCGCTaGGACAAGCCATCTTTCAAG +
Preference number: 3 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLTTVCR*DKPSFK
Trigger: CTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGTGGCCACATGTTGTCTaGAGGGGCAGTTGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGWPHVV*RGSWKR
Trigger: CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCA...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
3UTR-3UTR CAA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGTGGGTTTTCTGCCGATaGTTCCAGGTTCAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQWVFCR*FQVQEL
Trigger: CAGCTCCTGAACCTGGAACAATCGGCAGAAAACCCA...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGTTCGTTTTAATGAATTaGCATTGGCAACCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: GRALLLVSAPASSGKGSMFVLMN*HWQPQG
Trigger: GCCCTGGGGTTGCCAATGCAAATTCATTAAAACGAA...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp CAGGCTGTCCTGGGCCTGCCTTCAATGATAAGGCTGTaGACAGGGCACCTGCCTGTCACCTGTCTTTCATCC +
Preference number: 3 (lower is better)
Translates to: QAVLGLPSMIRL*TGHLPVTCLSS
Trigger: GGATGAAAGACAGGTGACAGGCAGGTGCCCTGTGCACAGCCTTATCATTGAAGGCAGGCCCAGGACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTTCGTTTTAATGAATTaGCATTGGCAACCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLFVLMN*HWQPQG
Trigger: GCCCTGGGGTTGCCAATGCAAATTCATTAAAACGAA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 72 bp CCTCAAAACCCTGAAGAGGGCCCAAGTAGCAGATTCTaGAACAAAGCTGGCTCCAAGGCAAGAGGGCCCCGA +
Preference number: 3 (lower is better)
Translates to: PQNPEEGPSSRF*NKAGSKARGPR
Trigger: TCGGGGCCCTCTTGCCTTGGAGCCAGCTTTGTTTCAGAATCTGCTACTTGGGCCCTCTTCAGGGTTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp TCCAAGCCCTGGGTTGTTCTACCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGAGGCAGTCTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: SKPWVVLPLSAA*TSHLSRGSLAG
Trigger: TCCAGCCAGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTTGCAGGGTTGCGAGTaGGTCCACTCCAGGAGATGT +
Preference number: 3 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELLQGCE*VHSRRC
Trigger: ACATCTCCTGGAGTGGACCAACTCGCAACCCTGCAA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp TGTTGGCATGGACAAGGAGGTCAGATTTCCAAGCCCTaGGTTGTTCTACCACTGTCTGCCGCTTGGACAAGC +
Preference number: 3 (lower is better)
Translates to: CWHGQGGQISKP*VVLPLSAAWTS
Trigger: GCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACCTCCTTGTCCATGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CCA 72 bp CAGATGATTGCTTCAAGTGGACAGACTACACTCCTCTaGAAGACCTCACCCAGGCAGGCTCCTGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: QMIASSGQTTLL*KTSPRQAPEES
Trigger: ACTCTCCTCAGGAGCCTGCCTGGGTGAGGTCTTCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR CCA 72 bp TTGCCCAAGGCTCCACCATTAGTAGTCAGCAGAGCATaGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCA +
Preference number: 3 (lower is better)
Translates to: LPKAPPLVVSRA*VQLPAKPALLS
Trigger: TGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTCTGCTGACTACTAATGGTGGAGCCTTGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTCCGACTTTGCAGGGTaGCGAGTTGGTCCACTCCAG +
Preference number: 3 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSSDFAG*RVGPLQ
Trigger: CTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGGA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTCAGCAGCTCCGACTTaGCAGGGTTGCGAGTTGGTC +
Preference number: 3 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSSAAPT*QGCELV
Trigger: GACCAACTCGCAACCCTGCAAAGTCGGAGCTGCTGA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGGGTCCCTATGGGTGTaGTACAAAAAGCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELGSLWV*YKKLPA
Trigger: TGCTGGCAGCTTTTTGTACAACACCCATAGGGACCC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGAGTCATAGTCAGTTTTaGATTATCTGCATGAATCCC +
Preference number: 3 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLSHSQF*IICMNP
Trigger: GGGATTCATGCAGATAATCAAAAACTGACTATGACT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR TCA 72 bp TGCAGGGTTGCGAGTTGGTCCACTCCAGGAGATGTTTaGCACCCATCAACATTAGGTGCTGAAGATGGTCTG +
Preference number: 3 (lower is better)
Translates to: CRVASWSTPGDV*HPSTLGAEDGL
Trigger: CAGACCATCTTCAGCACCTAATGTTGATGGGTGTCAAACATCTCCTGGAGTGGACCAACTCGCAACCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp TCAGATTTCCAAGCCCTGGGTTGTTCTACCACTGTCTaGCGCTTGGACAAGCCATCTTTCAAGAGGCAGTCT +
Preference number: 3 (lower is better)
Translates to: SDFQALGCSTTV*RLDKPSFKRQS
Trigger: AGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp ACCATTAGTAGTCAGCAGAGCATGGGTACAGCTGCCTaGAAAGCCTGCACTCTTGTCACTCTTCTACCTTCT +
Preference number: 3 (lower is better)
Translates to: TISSQQSMGTAA*KACTLVTLLPS
Trigger: AGAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTCTGCTGACTACTAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR CCA 72 bp TCATGGACCCTGAGCGTTGTGACATGTAAAGGAGGGTaGCTGCATCTTCCTTTGGTGTTTGGTCTAAAGCAG +
Preference number: 3 (lower is better)
Translates to: SWTLSVVTCKGG*LHLPLVFGLKQ
Trigger: CTGCTTTAGACCAAACACCAAAGGAAGATGCAGCCACCCTCCTTTACATGTCACAACGCTCAGGGTCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR-3UTR CAA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCAGCCTATTGTTATGTTaGTGCCTCTATTCAGATGCC +
Preference number: 3 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFSLLLC*CLYSDA
Trigger: GGCATCTGAATAGAGGCACAAACATAACAATAGGCT...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CAA 90 bp CCTGAAAACTCAGACATGTCCCCCACTTCTGCATTTGCCTTTCTGAGATGCTTCGCAAAGCCTGCACTCTaGTCACTCTTCTACCTTCTC +
Preference number: 3 (lower is better)
Translates to: PENSDMSPTSAFAFLRCFAKPAL*SLFYLL
Trigger: GAGAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGC...GAAGCATCTCAGAAAGGCAAATGCAGAAGTGGGGGACATGTCTGAGTTTTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CAA 90 bp GCCTTGCCATGTCTACCCATCCTAAACTCTCACATCATGGTCTTTCCCAATCTTAAAGAACCGGACCCTTaGTACAGCAGGGCTAGAACA +
Preference number: 3 (lower is better)
Translates to: ALPCLPILNSHIMVFPNLKEPDP*YSRART
Trigger: TGTTCTAGCCCTGCTGTACAAAGGGTCCGGTTCTTT...AAGATTGGGAAAGACCATGATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR-3UTR CAA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCTTCCAGTGTCTATTTTaGGGAACTGATGGTATTCTG +
Preference number: 3 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFFQCLF*GTDGIL
Trigger: CAGAATACCATCAGTTCCCAAAAATAGACACTGGAA...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR TCA 72 bp TGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATaGTTGCTTCAAGTGGACAGACTACACTCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: WELMVFCSQLPR*LLQVDRLHSSG
Trigger: TCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR GCA 72 bp GCTAATCACGCACTATACCATTTCTCTCGGCCTCTGTaGAGTCTGGGATATCTGGTCTTCGTTTTAATGAAT +
Preference number: 3 (lower is better)
Translates to: ANHALYHFSRPL*SLGYLVFVLMN
Trigger: ATTCATTAAAACGAAGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR GCA 72 bp ATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTaGCTTGCCATGTCTACCCATCCTAAACTCTCACAT +
Preference number: 3 (lower is better)
Translates to: MTGLFSKTLQNS*LAMSTHPKLSH
Trigger: ATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCCTGGGGTGACGGGCTaGGTGGTCGTCACGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCPGVTG*VVVTGL
Trigger: AAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCTGCCCCCGTTCCTGGTaGGGGGCTCTGGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCCPRSW*GALVVS
Trigger: GGAGACAACCAGAGCCCCTCACCAGGAACGGGGGCA...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCACTGCCTGAGCCCCTaGACCCAGAGGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCHCLSP*TQRVQL
Trigger: CAGCTGGACCCTCTGGGTGCAGGGGCTCAGGCAGTG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCAGGGTGCCCCTCCCTaGCCAGGGTTGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGQGAPP*PGLLWE
Trigger: CTCCCAGAGCAACCCTGGGCAGGGAGGGGCACCCTG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGCAAGAACGTGCCCGTaGCAGCTGGGTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMARTCP*QLGGIP
Trigger: TGGGATCCCACCCAGCTGGCACGGGCACGTTCTTGC...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGAACCGGCCCCGAGGCTaGGCTTCCCTCTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMNRPRG*ASLCPC
Trigger: ACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTT...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGACCAACCATCCCATaGGGCTGGGGCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGGPTIP*GWGRWG
Trigger: GCCCCATCTGCCCCAGCCCCATGGGATGGTTGGTCC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGTGCTGCCAGTCGGCTaGGCTGTTGCTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCVLPVG*AVASTA
Trigger: TGCTGTGGAAGCAACAGCTCAGCCGACTGGCAGCAC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGAGTGGGTGTGACCTaGGGGGTGACCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGGVGVT*GVTSMW
Trigger: CCACATGGAGGTCACCCCTCAGGTCACACCCACTCC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGGGGCCGAGGGTCTCTaGCTGGGTGGGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPGAEGL*LGGHRS
Trigger: GCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCCCC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCAGGGTGCCCCTCCCTaGCCAGGGTTGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQQGAPP*PGLLWE
Trigger: CTCCCAGAGCAACCCTGGGCAGGGAGGGGCACCCTG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCAGTTCAGGGCTCTGTTaGGGTCAGCACTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCSSGLC*GQHWVA
Trigger: GGCCACCCAGTGCTGACCCCAACAGAGCCCTGAACT...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGCTTTCCTAGGGCCCTaGTGTGCAGGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCAFLGP*CAGAFC
Trigger: GCAAAAGGCCCCTGCACACCAGGGCCCTAGGAAAGC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCGTGCCCGTGCCAGCTaGGTGGGATCCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGRARAS*VGSQHL
Trigger: CAGGTGCTGGGATCCCACCCAGCTGGCACGGGCACG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCGGGCCTTAGCCCTTTaGGCTCTTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGRALAL*ALGHCL
Trigger: CAGGCAGTGGCCAAGAGCCCAAAGGGCTAAGGCCCG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCGTGGGCCATGGCTTCTaGGCCCTGCCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCVGHGF*ALPGAP
Trigger: CGGAGCCCCTGGCAGGGCCCAGAAGCCATGGCCCAC...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546076.6
CDS-3UTR TCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGGAAGCCGGTCACCATaGCAAGTACGCCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMGSRSP*QVRPQR
Trigger: TCTTTGCGGGCGTACTTGTCATGGTGACCGGCTTCC...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGTCCACTGAGGCGGTaGTCTGCGTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGGPLRR*SAWLRA
Trigger: AGCCCGGAGCCACGCAGATCACCGCCTCAGTGGACC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCTGGAGTCGGTCCACTaGGGCGGTGATCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQLESVH*GGDLRG
Trigger: GCCACGCAGATCACCGCCTCAGTGGACCGACTCCAG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCAGCAGCTCCGACTTTaGAGGGTTGCGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCQQLRL*RVASWS
Trigger: GGACCAACTCGCAACCCTGCAAAGTCGGAGCTGCTG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCCTTCTCTTGGTGTCTaGCCCTGCGAGCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMPSLGV*PCELRE
Trigger: TTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCACCCCCGGCCCATGTaGCATGGGTGCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLHPRPM*HGCCFV
Trigger: CACAAAGCAGCACCCATGGCACATGGGCCGGGGGTG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACAGCCGGCTTCCCTCTaGCCGCCCGGGGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEQPASL*PPGGSS
Trigger: CGAGCTTCCCCCGGGCGGGCAGAGGGAAGCCGGCTG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535215.5
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCCGACCTGCTCACATaGCCCGCGAGTGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPDLLT*PASVPG
Trigger: GCCTGGGACACTCGCGGGGCATGTGAGCAGGTCGGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535215.5
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCAAGGGCAAGGTCTTCTaGGGGAAATGCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCKGKVF*GKCQPS
Trigger: GGAGGGCTGGCATTTCCCCCAGAAGACCTTGCCCTT...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCAGAGCTGGACCCCCTaGAAGCAGTGTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLQSWTP*KQCGGG
Trigger: GCCACCACCACACTGCTTCCAGGGGGTCCAGCTCTG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGACTGCCGCCTCCCCCTaGCACCTCGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQTAASP*HLGRKN
Trigger: GTTCTTCCTGCCGAGGTGCCAGGGGGAGGCGGCAGT...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCACCATCCCATGGGGCTaGGGCAGATGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGTIPWG*GRWGRL
Trigger: CAGCCTGCCCCATCTGCCCCAGCCCCATGGGATGGT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCAGGGGCACACCCCGCTaGGGACCACATCGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGRGTPR*GPHRWL
Trigger: GAGCCAACGATGTGGTCCCCAGCGGGGTGTGCCCCT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCCGGCCCATGTGCCATaGGTGCTGCTTTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCPAHVP*VLLCDS
Trigger: ACTGTCACAAAGCAGCACCCATGGCACATGGGCCGG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGAGGCACCTGGTCTCCTaGCCAAGATCACAGGCGATC +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMRHLVS*PRSQAI
Trigger: GATCGCCTGTGATCTTGGCCAGGAGACCAGGTGCCT...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGTCCACTGAGGCGGTaGTCTGCGTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGPLRR*SAWLRA
Trigger: AGCCCGGAGCCACGCAGATCACCGCCTCAGTGGACC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCACTGCTCCAGCTTGGTaGGGCAGCCTCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGTAPAW*GSLPPP
Trigger: AGGTGGAGGGAGGCTGCCTCACCAAGCTGGAGCAGT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGAGCACTGGGTGGCCTTaGGGCCACTCCTATGTATGG +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGSTGWP*GHSYVW
Trigger: CCATACATAGGAGTGGCCTCAAGGCCACCCAGTGCT...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGGAGTGGGTGTGACCTaGGGGGTGACCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGGVGVT*GVTSMW
Trigger: CCACATGGAGGTCACCCCTCAGGTCACACCCACTCC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCATGGCTTCTGGGCCTaGTCACATGCCCCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGHGFWA*SHAPRV
Trigger: CACTCGCGGGGCATGTGAGCAGGCCCAGAAGCCATG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261177.10
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCCACAGCCAGGACGGCTaGTCCCCCGACCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPHSQDG*SPDPEE
Trigger: TTCTTCTGGGTCGGGGGAGCAGCCGTCCTGGCTGTG...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGGGGCCGAGGGTCTCTaGCTGGGTGGGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRGAEGL*LGGHRS
Trigger: GCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCCCC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGTGGGCTCTTGGCCACTaGCTGAGCCCCTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGWALGH*LSPCTQ
Trigger: CTGGGTGCAGGGGCTCAGGCAGTGGCCAAGAGCCCA...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCATGGCTTCTGGGCCCTaGCAGGGGCTCCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPMASGP*QGLRKR
Trigger: CCGCTTCCGGAGCCCCTGGCAGGGCCCAGAAGCCAT...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCCCATAAGCAGCAGGTaGTCGGCCAGGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLPISSR*SARNCS
Trigger: GGAGCAGTTCCTGGCCGACCACCTGCTGCTTATGGG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCCTGGTGAGGGGCTCTaGTTGTCTCCTGAAAGGATC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCPGEGL*LSPERI
Trigger: GATCCTTTCAGGAGACAACCAGAGCCCCTCACCAGG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCCTAGAGGCCAGGGCTTaGGGCCATGGTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCLEARA*GHGLPG
Trigger: CCCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAG...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCTAGAGGCCAGGGCTTaGGGCCATGGTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGLEARA*GHGLPG
Trigger: CCCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCCCCTGGAAGCAGTGTaGTGGTGGCTACGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLPLEAV*WWLRGQ
Trigger: TTGACCCCGTAGCCACCACCACACTGCTTCCAGGGG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCAACCGGCCCCGAGGCTaGGCTTCCCTCTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPNRPRG*ASLCPC
Trigger: ACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCGTGCCCGTGCCAGCTaGGTGGGATCCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGRARAS*VGSQHL
Trigger: CAGGTGCTGGGATCCCACCCAGCTGGCACGGGCACG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGTGGTTCTCAAAGTGTaGTTCCAGGGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCVVLKV*FQGQQL
Trigger: CAGCTGCTGGCCCTGGAACCACACTTTGAGAACCAC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCCTAGCCCCCAATGGTaGAGCGAGTCGGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLPSPQW*SESGIS
Trigger: CGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGACTCCTAGCCCCCAATaGTGGAGCGAGTCGGGAATC +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGTPSPQ*WSESGI
Trigger: GATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGT...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCTGGAGTCGGTCCACTaGGGCGGTGATCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGLESVH*GGDLRG
Trigger: GCCACGCAGATCACCGCCTCAGTGGACCGACTCCAG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCTGGAGTCGGTCCACTaGGGCGGTGATCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRLESVH*GGDLRG
Trigger: GCCACGCAGATCACCGCCTCAGTGGACCGACTCCAG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGTGCTGCCAGTCGGCTaGGCTGTTGCTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGVLPVG*AVASTA
Trigger: TGCTGTGGAAGCAACAGCTCAGCCGACTGGCAGCAC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGGGAATCCCGTGCTaGATGCAGGAGTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGGIPC*MQECRG
Trigger: ACCCCGGCACTCCTGCATTCAGCACGGGATTCCCCC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTGGGATCCCAGCACCTaGTGCTGCTTTCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGWDPST*CCFPRA
Trigger: GGCCCTAGGAAAGCAGCATCAGGTGCTGGGATCCCA...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCTGTTTGTACCTGGGGTaGCGGGCTGGGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLCLYLG*RAGWSS
Trigger: TGACGACCACCCAGCCCGTCACCCCAGGTACAAACA...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACTGGGCCTGCTCACATaGCCCGCGAGTGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLELGLLT*PASVPG
Trigger: GCCTGGGACACTCGCGGGGCATGTGAGCAGGCCCAG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261177.10
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAACTGAGGCGGTGATCTaGGTGGCTCCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLETEAVI*VAPGCP
Trigger: CGGGCAGCCCGGAGCCACGCAGATCACCGCCTCAGT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTGGTCGGCCAGGAACTaGTCCAGCTTGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGWSARN*SSLVRQ
Trigger: CTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCA...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCACCCCGATGCCCACTaGCCCCATAAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGHPDAH*PHKQQV
Trigger: CACCTGCTGCTTATGGGGGCAGTGGGCATCGGGGTG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCGCTGGAGCCTCTGGTaGAAGCAGCAGGTGAGAACC +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGRWSLW*KQQVRT
Trigger: GGTTCTCACCTGCTGCTTGCACCAGAGGCTCCAGCG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGGGCCGAGGGTCTCTaGCTGGGTGGGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEGAEGL*LGGHRS
Trigger: GCTTCTGTGCCCACCCAGGCAGAGACCCTCGGCCCC...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCAGCAGCTCCGACTTTaGAGGGTTGCGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLQQLRL*RVASWS
Trigger: GGACCAACTCGCAACCCTGCAAAGTCGGAGCTGCTG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCACTGCCTGAGCCCCTaGACCCAGAGGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGHCLSP*TQRVQL
Trigger: CAGCTGGACCCTCTGGGTGCAGGGGCTCAGGCAGTG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGTGGGCTCTTGGCCACTaGCTGAGCCCCTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRWALGH*LSPCTQ
Trigger: CTGGGTGCAGGGGCTCAGGCAGTGGCCAAGAGCCCA...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGGGAATCTCGGCTGCTaGAGGTGGAGCTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGGNLGC*RWSSAG
Trigger: TCCAGCTGAGCTCCACCTGCAGCAGCCGAGATTCCC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGTCGGGAATCTCGGCTaGTGCAGGTGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLVGNLG*CRWSSA
Trigger: AGCTGAGCTCCACCTGCAGCAGCCGAGATTCCCGAC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGTCGGGAATCTCGGCTaGTGCAGGTGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPVGNLG*CRWSSA
Trigger: AGCTGAGCTCCACCTGCAGCAGCCGAGATTCCCGAC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCTGCTCCCCCGACCTaGTCACATGCCCCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEAAPPT*SHAPRV
Trigger: CACTCGCGGGGCATGTGAGCAGGTCGGGGGAGCAGC...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535215.5
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGAGTGCCGGGGTTCCTaGGTTTTCTGCCGATTGTTC +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGECRGS*VFCRLF
Trigger: GAACAATCGGCAGAAAACCCAGGAACCCCGGCACTC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCCCCCTGGAAGCAGTGTaGTGGTGGCTACGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLPLEAV*WWLRGQ
Trigger: TTGACCCCGTAGCCACCACCACACTGCTTCCAGGGG...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGAGGGGCACACCCCGCTaGGGACCACATCGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLRGTPR*GPHRWL
Trigger: GAGCCAACGATGTGGTCCCCAGCGGGGTGTGCCCCT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGCTTTCCTAGGGCCCTaGTGTGCAGGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPAFLGP*CAGAFC
Trigger: GCAAAAGGCCCCTGCACACCAGGGCCCTAGGAAAGC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCAGCCCTTTGGGCTCTTaGCCACTGCCTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCSPLGS*PLPEPL
Trigger: CAGGGGCTCAGGCAGTGGCCAAGAGCCCAAAGGGCT...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGAGCCCTTTGGGCTCTTaGCCACTGCCTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGSPLGS*PLPEPL
Trigger: CAGGGGCTCAGGCAGTGGCCAAGAGCCCAAAGGGCT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACCTGGGGTGACGGGCTaGGTGGTCGTCACGGGCCTT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEPGVTG*VVVTGL
Trigger: AAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCCCACAGGGCCGTGCTaGGCCCTTCTGGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQPTGPC*ALLDVN
Trigger: GTTTACATCCAGAAGGGCCCAGCACGGCCCTGTGGG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGAGCCCGGCCCAGCATaGCCAGTATATCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCEPGPA*PVYQEC
Trigger: ACATTCTTGATATACTGGCCATGCTGGGCCGGGCTC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGCCTGGAATAACGGCTaGCACTTGCACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPAWNNG*HLHRAG
Trigger: CCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCAACATTGGGCTGCCTaGAATAACGGCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMQHWAA*NNGWHL
Trigger: CAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp TCCACGGGTGCCCCCGTTCCTGGTGAGGGGCTCTGGTaGTCTCCTGAAAGGATCATTTCCCTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: STGAPVPGEGLW*SPERIISLPRI
Trigger: GATCCTGGGCAGGGAAATGATCCTTTCAGGAGACAACCAGAGCCCCTCACCAGGAACGGGGGCACCCGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGAAGCCGGTCACCATaGCAAGTACGCCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQGSRSP*QVRPQR
Trigger: TCTTTGCGGGCGTACTTGTCATGGTGACCGGCTTCC...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGCTCTGGTTGTCTCCTaGAAGGATCATTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGALVVS*KDHFPA
Trigger: GGCAGGGAAATGATCCTTTCAGGAGACAACCAGAGC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGGGCCCGGGAGGAATTaGCCTGGGTATGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLGPGRN*PGYGSV
Trigger: TACAGATCCATACCCAGGTCAATTCCTCCCGGGCCC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCAGGACTGGGCACTGCTaGAATAGGGGAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCRTGHC*NRGRGQ
Trigger: CTGCCCCCTTCCCCTATTTCAGCAGTGCCCAGTCCT...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGATGTACGTGCTGTGCTaGCAGTCGGCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLMYVLC*QSAELL
Trigger: CAACAGCTCAGCCGACTGGCAGCACAGCACGTACAT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCAGGATGTACGTGCTGTaGTGCCAGTCGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGRMYVL*CQSAEL
Trigger: CAGCTCAGCCGACTGGCAGCACAGCACGTACATCCT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGTGGTCGGCCAGGAACTaGTCCAGCTTGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGWSARN*SSLVRQ
Trigger: CTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCA...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCACCCCGATGCCCACTaGCCCCATAAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGHPDAH*PHKQQV
Trigger: CACCTGCTGCTTATGGGGGCAGTGGGCATCGGGGTG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGAATCCCGTGCTGAATaGAGGAGTGCCGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLESRAE*RSAGVP
Trigger: AGGAACCCCGGCACTCCTGCATTCAGCACGGGATTC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCAATGCCAGCCCTCCCTaGCCCACCCCATGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPNASPP*PTPCFF
Trigger: GAAAAAGCATGGGGTGGGGCAGGGAGGGCTGGCATT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTTACCCCCTGCTTCCTaGCAGGGCGGCTCTACCCAG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGLPPAS*QGGSTQ
Trigger: CTGGGTAGAGCCGCCCTGGCAGGAAGCAGGGGGTAA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCCGACTTTGCAGGGTTaGGAGTTGGTCCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGPTLQG*ELVHSR
Trigger: CCTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGTGTTCTACCACTGTCTaGCGCTTGGACAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMCSTTV*RLDKPS
Trigger: AGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACA...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCCTAGGGCCCTGGTGTaGAGGGGCCTTTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLPRALV*RGLLPA
Trigger: TGCAGGCAAAAGGCCCCTGCACACCAGGGCCCTAGG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGCAGCATGGAGTGTaGAGGGCAAGAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGQHGV*RARTCP
Trigger: CGGGCACGTTCTTGCCCTGCACACTCCATGCTGCCC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGGGCAGCATGGAGTGTaGAGGGCAAGAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRGQHGV*RARTCP
Trigger: CGGGCACGTTCTTGCCCTGCACACTCCATGCTGCCC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCGTTTCATTCTTGCCTaGTGTCCTGACACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCRFILA*CPDTGH
Trigger: GTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCCCATGTGCCATGGGTaGTGCTTTGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQPMCHG*CFVTVP
Trigger: GGGCACTGTCACAAAGCAGCACCCATGGCACATGGG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCCACCCCCGGCCCATGTaGCATGGGTGCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPHPRPM*HGCCFV
Trigger: CACAAAGCAGCACCCATGGCACATGGGCCGGGGGTG...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCCAGCAATAGCAGGTaGCCCATGCAGGGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPSNSR*PMQGAR
Trigger: TCTAGCCCCCTGCATGGGGCACCTGCTATTGCTGGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCCCCACTGAGGCTTCCTaGCGGCCCTCTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFPTEAS*RPSSPR
Trigger: GCGGGGACTAGAGGGCCGGCAGGAAGCCTCAGTGGG...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCCATAAGCAGCAGGTaGTCGGCCAGGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPISSR*SARNCS
Trigger: GGAGCAGTTCCTGGCCGACCACCTGCTGCTTATGGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTGCAGGCCTTGCAGATaGCATGTGGCCACATGTTGT +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGCRPCR*HVATCC
Trigger: ACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCAGGGCTTCTGGGCATaGGTGGGGGAATCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRQGFWA*VGESRA
Trigger: AGCACGGGATTCCCCCACCCATGCCCAGAAGCCCTG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGAGCAGGGAGGTGAGCTaGGACCTCGCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRSREVS*DLAQPW
Trigger: CCAAGGCTGAGCGAGGTCCCAGCTCACCTCCCTGCT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCGCCTGCCCCAGGACTaGCCTAGGTCAGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGRLPQD*PRSAMC
Trigger: GCACATTGCTGACCTAGGCCAGTCCTGGGGCAGGCG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTTCCCTCTGTCCATGTaGGTACTTCCTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGFPLSM*VLPVLR
Trigger: CCTCAGCACAGGAAGTACCCACATGGACAGAGGGAA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGGCCTCTGTGCAGTCTaGGATATCTGGTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GRALLLVSAPASSGKGSMGLCAV*DIWSSF
Trigger: AAACGAAGACCAGATATCCCAGACTGCACAGAGGCC...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATACTGCCGCCTCCCCCTaGCACCTCGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYTAASP*HLGRKN
Trigger: GTTCTTCCTGCCGAGGTGCCAGGGGGAGGCGGCAGT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGAAGAGGCAGTCTGGCTaGACGACACACAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQKRQSG*TTHRAG
Trigger: TCCTGCCCTGTGTGTCGTCCAGCCAGACTGCCTCTT...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGACGCGCCCTTCTCTTaGTGTCTGCCCCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLDAPFS*CLPLRA
Trigger: AGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCACCTGAAGGGGAGGTaGTCAACACAACCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQHLKGR*STQPQG
Trigger: ACCCTGGGGTTGTGTTGACCACCTCCCCTTCAGGTG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGGATGTAAACACCTCTaGCCATGCACAGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCGCKHL*PCTAQA
Trigger: AGCTTGTGCTGTGCATGGCCAGAGGTGTTTACATCC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCCCTAGCCCCCAATGGTaGAGCGAGTCGGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCPSPQW*SESGIS
Trigger: CGAGATTCCCGACTCGCTCCACCATTGGGGGCTAGG...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp AGTTCAGGGCTCTGTTGGGGTCAGCACTGGGTGGCCTaGAGGCCACTCCTATGTATGGGAGAGAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: SSGLCWGQHWVA*RPLLCMGERAR
Trigger: GCGTGCTCTCTCTCCCATACATAGGAGTGGCCTCAAGGCCACCCAGTGCTGACCCCAACAGAGCCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGTACGCCCGCAAAGATaGGGATGTAGGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEVRPQR*GCRRRR
Trigger: CCGCCTCCGCCTACATCCTCATCTTTGCGGGCGTAC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTGCTTCCACAGCACTTaGAATCCTGCTGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLCFHST*NPAGVG
Trigger: ACCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGTGCTGCCAGTCGGCTaGGCTGTTGCTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLVLPVG*AVASTA
Trigger: TGCTGTGGAAGCAACAGCTCAGCCGACTGGCAGCAC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAACTGCTCCAGCTTGGTaGGGCAGCCTCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLETAPAW*GSLPPP
Trigger: AGGTGGAGGGAGGCTGCCTCACCAAGCTGGAGCAGT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTGCCCCCGTTCCTGGTaGGGGGCTCTGGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELCPRSW*GALVVS
Trigger: GGAGACAACCAGAGCCCCTCACCAGGAACGGGGGCA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGGGGGAATCCCGTGCTaGATGCAGGAGTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELGGIPC*MQECRG
Trigger: ACCCCGGCACTCCTGCATTCAGCACGGGATTCCCCC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGATCAAGCAGGGAGGTaGGCTGGGACCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEDQAGR*AGTSLS
Trigger: GCTGAGCGAGGTCCCAGCTCACCTCCCTGCTTGATC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGGCCCGGGAGGAATTaGCCTGGGTATGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGGPGRN*PGYGSV
Trigger: TACAGATCCATACCCAGGTCAATTCCTCCCGGGCCC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTGGGATCCCAGCACCTaGTGCTGCTTTCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGWDPST*CCFPRA
Trigger: GGCCCTAGGAAAGCAGCATCAGGTGCTGGGATCCCA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGAGGACTGGGCACTGCTaGAATAGGGGAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRRTGHC*NRGRGQ
Trigger: CTGCCCCCTTCCCCTATTTCAGCAGTGCCCAGTCCT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGATGTACGTGCTGTGCTaGCAGTCGGCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQMYVLC*QSAELL
Trigger: CAACAGCTCAGCCGACTGGCAGCACAGCACGTACAT...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCATGTACGTGCTGTGCTaGCAGTCGGCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGMYVLC*QSAELL
Trigger: CAACAGCTCAGCCGACTGGCAGCACAGCACGTACAT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGTGGTCGGCCAGGAACTaGTCCAGCTTGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRWSARN*SSLVRQ
Trigger: CTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCA...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCGCTGGAGCCTCTGGTaGAAGCAGCAGGTGAGAACC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGRWSLW*KQQVRT
Trigger: GGTTCTCACCTGCTGCTTGCACCAGAGGCTCCAGCG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGCAAGAACGTGCCCGTaGCAGCTGGGTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYARTCP*QLGGIP
Trigger: TGGGATCCCACCCAGCTGGCACGGGCACGTTCTTGC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCACAGGCAGAAATACGTaGAGAGGCAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPTGRNT*RGSPSA
Trigger: AGCGGAAGGGCTGCCTCTCCACGTATTTCTGCCTGT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCTGGGCACAGAAGCTATaGTCTCAGGCACTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLWAQKL*SQALGG
Trigger: TCCACCGAGTGCCTGAGACCATAGCTTCTGTGCCCA...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGAGTGCCGGGGTTCCTaGGTTTTCTGCCGATTGTTC +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLECRGS*VFCRLF
Trigger: GAACAATCGGCAGAAAACCCAGGAACCCCGGCACTC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCAAGGTCAGGGCTTCTaGGCATGGGTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRQGQGF*AWVGES
Trigger: GGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCCAGCATGTGCTGGTATaGCCACCTTACCCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPQHVLV*PPYPLL
Trigger: AAGCAGGGGGTAAGGTGGCCATACCAGCACATGCTG...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCAGGGCTTGGGGCCATaGTCTCCCAGGGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLQGLGP*SPREVS
Trigger: AGAAACCTCCCTGGGAGACCATGGCCCCAAGCCCTG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAAGCAGGGAGGTGAGCTaGGACCTCGCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLESREVS*DLAQPW
Trigger: CCAAGGCTGAGCGAGGTCCCAGCTCACCTCCCTGCT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACGCCTGCCCCAGGACTaGCCTAGGTCAGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLERLPQD*PRSAMC
Trigger: GCACATTGCTGACCTAGGCCAGTCCTGGGGCAGGCG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGAGTTCAGGGCTCTGTTaGGGTCAGCACTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRSSGLC*GQHWVA
Trigger: GGCCACCCAGTGCTGACCCCAACAGAGCCCTGAACT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCAAGAGGCAGTCTGGCTaGACGACACACAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCKRQSG*TTHRAG
Trigger: TCCTGCCCTGTGTGTCGTCCAGCCAGACTGCCTCTT...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGCGGGAGGAATTGACCTaGGTATGGATCTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLREELT*VWICTL
Trigger: GAGGGTACAGATCCATACCCAGGTCAATTCCTCCCG...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCCCACAGGGCCGTGCTaGGCCCTTCTGGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLPTGPC*ALLDVN
Trigger: GTTTACATCCAGAAGGGCCCAGCACGGCCCTGTGGG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCACATGTAAAGGAGGGTaGCTGCATCTTCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCTCKGG*LHLPLV
Trigger: CACCAAAGGAAGATGCAGCCACCCTCCTTTACATGT...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGCACAGGGCAGGGTATaGGGAGCAGGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLAQGRV*GAGLRF
Trigger: AAACCTGAGGCCTGCTCCCCATACCCTGCCCTGTGC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTGCTTCCACAGCACTTaGAATCCTGCTGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGCFHST*NPAGVG
Trigger: ACCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCA...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGAAACCTGGTGTTCCTaGGAATCAGGCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGETWCS*ESGPGT
Trigger: TGTTCCGGGGCCTGATTCTCAGGAACACCAGGTTTC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCAGCACTGGGTGGCCTTaGGGCCACTCCTATGTATGG +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPSTGWP*GHSYVW
Trigger: CCATACATAGGAGTGGCCTCAAGGCCACCCAGTGCT...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAATCTTGCCTGCTGTCCTaGCACAGGTCACCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLESCLLS*HRSPRG
Trigger: TCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGA...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATTGTTTGTACCTGGGGTaGCGGGCTGGGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYCLYLG*RAGWSS
Trigger: TGACGACCACCCAGCCCGTCACCCCAGGTACAAACA...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCAGCACTTGAAATCCTaGTGGAGTCGGTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGQHLKS*WSRSTE
Trigger: CTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGCAACAGGATGTACGTaGTGTGCTGCCAGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRATGCT*CAASRL
Trigger: CAGCCGACTGGCAGCACAGCACGTACATCCTGTTGC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGCAACAGGATGTACGTaGTGTGCTGCCAGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLATGCT*CAASRL
Trigger: CAGCCGACTGGCAGCACAGCACGTACATCCTGTTGC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCAACAGGATGTACGTaGTGTGCTGCCAGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGATGCT*CAASRL
Trigger: CAGCCGACTGGCAGCACAGCACGTACATCCTGTTGC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCAAAGGATCATTTCCCTaGCCAGGATCTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLKGSFP*PGSGHG
Trigger: CCCATGGCCAGATCCTGGGCAGGGAAATGATCCTTT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGTCAATGATAAGGCTGTaGACAGGGCACCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQSMIRL*TGHLPV
Trigger: GACAGGCAGGTGCCCTGTGCACAGCCTTATCATTGA...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCAGGGGCCTTTTGCCTaGACGGGACTGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGQGPFA*TGLKVT
Trigger: TGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCCAGGGGCCTTTTGCCTaGACGGGACTGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPQGPFA*TGLKVT
Trigger: TGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGTGTGCAGGGGCCTTTTaGCTGCACGGGACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLCAGAF*LHGTEG
Trigger: ACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTGCACA...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCCTTCTCTTGGTGTCTaGCCCTGCGAGCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRPSLGV*PCELRE
Trigger: TTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGATGTGCCATGGGTGCTaGTTTGTGACAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGMCHGC*FVTVPP
Trigger: AGGGGGCACTGTCACAAAGCAGCACCCATGGCACAT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGATAGCAGGTGCCCCATaGAGGGGGCTAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGIAGAP*RGLERR
Trigger: CCTTCTTTCTAGCCCCCTGCATGGGGCACCTGCTAT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGATAACGGCTGGCACTTaGACAGGGCAGGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLITAGT*TGQGMG
Trigger: CCCCATACCCTGCCCTGTGCAAGTGCCAGCCGTTAT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGACAGGCAGAAATACGTaGAGAGGCAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGTGRNT*RGSPSA
Trigger: AGCGGAAGGGCTGCCTCTCCACGTATTTCTGCCTGT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGTCTCTGCCTGGGTaGGCACAGAAGCTATGGTCT +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGSLPG*AQKLWS
Trigger: AGACCATAGCTTCTGTGCCCACCCAGGCAGAGACCC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGCTTCTGGGCATGGGTaGGGGAATCCCGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRASGHG*GNPVLN
Trigger: ATTCAGCACGGGATTCCCCCACCCATGCCCAGAAGC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGAAGGGCAAGGTCTTCTaGGGGAAATGCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLKGKVF*GKCQPS
Trigger: GGAGGGCTGGCATTTCCCCCAGAAGACCTTGCCCTT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGCTCCAAGAAGCCACTaGAGAACACCCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQAPRSH*RTPREE
Trigger: CTCTTCTCTGGGTGTTCTCCAGTGGCTTCTTGGAGC...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGCTCCAAGAAGCCACTaGAGAACACCCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGAPRSH*RTPREE
Trigger: CTCTTCTCTGGGTGTTCTCCAGTGGCTTCTTGGAGC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCCCAGGCTGTTGGCATaGACAAGGAGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGPRLLA*TRRSDF
Trigger: GAAATCTGACCTCCTTGTCCATGCCAACAGCCTGGG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGACGCGCCCTTCTCTTaGTGTCTGCCCCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELDAPFS*CLPLRA
Trigger: AGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCCGGCCCATGTGCCATaGGTGCTGCTTTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLPAHVP*VLLCDS
Trigger: ACTGTCACAAAGCAGCACCCATGGCACATGGGCCGG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGTCAGTGTTTGTACCTaGGGTGACGGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRVSVCT*GDGLGG
Trigger: ACCACCCAGCCCGTCACCCCAGGTACAAACACTGAC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGAGCCCGGCCCAGCATaGCCAGTATATCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGEPGPA*PVYQEC
Trigger: ACATTCTTGATATACTGGCCATGCTGGGCCGGGCTC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGACTCCTAGCCCCCAATaGTGGAGCGAGTCGGGAATC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGTPSPQ*WSESGI
Trigger: GATTCCCGACTCGCTCCACCATTGGGGGCTAGGAGT...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGCACAGGGCAGGGTATaGGGAGCAGGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEAQGRV*GAGLRF
Trigger: AAACCTGAGGCCTGCTCCCCATACCCTGCCCTGTGC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCCTGGAATAACGGCTaGCACTTGCACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEAWNNG*HLHRAG
Trigger: CCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGC...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGATGACTCACATCCATaGGCCAGCTGCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGDDSHP*ASCFQE
Trigger: TTCCTGGAAGCAGCTGGCCCATGGATGTGAGTCATC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGGAAGCCGGTCACCATaGCAAGTACGCCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEGSRSP*QVRPQR
Trigger: TCTTTGCGGGCGTACTTGTCATGGTGACCGGCTTCC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGCTCAACCAGGAAGATaGCGAGCAACAGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPAQPGR*RATGRN
Trigger: ATTTCTGCCTGTTGCTCGTCATCTTCCTGGTTGAGC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGACTGCTCCAGCTTGGTaGGGCAGCCTCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGTAPAW*GSLPPP
Trigger: AGGTGGAGGGAGGCTGCCTCACCAAGCTGGAGCAGT...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGAAACCTGGTGTTCCTaGGAATCAGGCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRETWCS*ESGPGT
Trigger: TGTTCCGGGGCCTGATTCTCAGGAACACCAGGTTTC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGTTTCCTGGCTGGCCATaGGCTGACCATGGTGACACG +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEFPGWP*ADHGDT
Trigger: CGTGTCACCATGGTCAGCTCATGGCCAGCCAGGAAA...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCACAGCCAGGACGGCTaGTCCCCCGACCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGHSQDG*SPDPEE
Trigger: TTCTTCTGGGTCGGGGGAGCAGCCGTCCTGGCTGTG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAAGGATGTACGTGCTGTaGTGCCAGTCGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLERMYVL*CQSAEL
Trigger: CAGCTCAGCCGACTGGCAGCACAGCACGTACATCCT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCACCCCGATGCCCACTaGCCCCATAAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGHPDAH*PHKQQV
Trigger: CACCTGCTGCTTATGGGGGCAGTGGGCATCGGGGTG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGGTTCCTGGGTTTTCTaGCGATTGTTCCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPGSWVF*RLFQVQ
Trigger: CTGAACCTGGAACAATCGGCAGAAAACCCAGGAACC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGTGTTCTACCACTGTCTaGCGCTTGGACAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQCSTTV*RLDKPS
Trigger: AGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACA...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGATGTGCCATGGGTGCTaGTTTGTGACAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLMCHGC*FVTVPP
Trigger: AGGGGGCACTGTCACAAAGCAGCACCCATGGCACAT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACCCATGTGCCATGGGTaGTGCTTTGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEPMCHG*CFVTVP
Trigger: GGGCACTGTCACAAAGCAGCACCCATGGCACATGGG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCGACAGTCCCTGCTCTTaGTTTGGGGTCAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPDSPCS*FGVSVC
Trigger: ACAAACACTGACCCCAAAGCAAGAGCAGGGACTGTC...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGATAGCAGGTGCCCCATaGAGGGGGCTAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRIAGAP*RGLERR
Trigger: CCTTCTTTCTAGCCCCCTGCATGGGGCACCTGCTAT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCCCAGCAATAGCAGGTaGCCCATGCAGGGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELPSNSR*PMQGAR
Trigger: TCTAGCCCCCTGCATGGGGCACCTGCTATTGCTGGG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATATAACGGCTGGCACTTaGACAGGGCAGGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYITAGT*TGQGMG
Trigger: CCCCATACCCTGCCCTGTGCAAGTGCCAGCCGTTAT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCCCAATTACCCAGATGATTGCTTCAAGTGGACAGACTACACTCCTCTGGAAGGCCCCGCACGCGAGCTaGCGGCTCTTTGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPITQMIASSGQTTLLWKAPHAS*RLFVWG
Trigger: CCCCCAAACAAAGAGCCGGCAGCTCGCGTGCGGGGC...CTTCCAGAGGAGTGTAGTCTGTCCACTTGAAGCAATCATCTGGGTAATTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp GCAGATTCCTTGAAGTTAGGTAAGTTGCCCAAGGCTCCACCATTAGTAGTCAGCATGGCTTCTGGGCCCTaGCAGGGGCTCCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ADSLKLGKLPKAPPLVVSMASGP*QGLRKR
Trigger: CCGCTTCCGGAGCCCCTGGCAGGGCCCAGAAGCCAT...GCTGACTACTAATGGTGGAGCCTTGGGCAACTTACCTAACTTCAAGGAATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGACAGGCAGAAATACGTaGAGAGGCAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRTGRNT*RGSPSA
Trigger: AGCGGAAGGGCTGCCTCTCCACGTATTTCTGCCTGT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCACTTGAAATCCTGCTaGAGTCGGTCCACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRHLKSC*SRSTEA
Trigger: CGCCTCAGTGGACCGACTCCAGCAGGATTTCAAGTG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCCCATAAGCAGCAGGTaGTCGGCCAGGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELPISSR*SARNCS
Trigger: GGAGCAGTTCCTGGCCGACCACCTGCTGCTTATGGG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCTTGCAGATGGCATGTaGCCACATGTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGLADGM*PHVVLR
Trigger: CCTCAAGACAACATGTGGCCACATGCCATCTGCAAG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTGGGCACAGAAGCTATaGTCTCAGGCACTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPWAQKL*SQALGG
Trigger: TCCACCGAGTGCCTGAGACCATAGCTTCTGTGCCCA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGGGTCTCTGCCTGGGTaGGCACAGAAGCTATGGTCT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEGSLPG*AQKLWS
Trigger: AGACCATAGCTTCTGTGCCCACCCAGGCAGAGACCC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCAGCATGTGCTGGTATaGCCACCTTACCCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLQHVLV*PPYPLL
Trigger: AAGCAGGGGGTAAGGTGGCCATACCAGCACATGCTG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTACCATCCCATGGGGCTaGGGCAGATGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSTIPWG*GRWGRL
Trigger: CAGCCTGCCCCATCTGCCCCAGCCCCATGGGATGGT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGGACCAACCATCCCATaGGGCTGGGGCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSGPTIP*GWGRWG
Trigger: GCCCCATCTGCCCCAGCCCCATGGGATGGTTGGTCC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCCAGGCTGTTGGCATaGACAAGGAGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPRLLA*TRRSDF
Trigger: GAAATCTGACCTCCTTGTCCATGCCAACAGCCTGGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCTGATGGCTCCTTATaGAGATGGAGAACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPDGSL*RWRTGG
Trigger: TCCCCCAGTTCTCCATCTCCATAAGGAGCCATCAGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCGGGCCTTAGCCCTTTaGGCTCTTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGRALAL*ALGHCL
Trigger: CAGGCAGTGGCCAAGAGCCCAAAGGGCTAAGGCCCG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGGATGTAAACACCTCTaGCCATGCACAGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLGCKHL*PCTAQA
Trigger: AGCTTGTGCTGTGCATGGCCAGAGGTGTTTACATCC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCATTCTGAAACAAAGCTaGCTCCAAGGCAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLILKQS*LQGKRA
Trigger: GGCCCTCTTGCCTTGGAGCCAGCTTTGTTTCAGAAT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGTGGTTCTCAAAGTGTaGTTCCAGGGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLVVLKV*FQGQQL
Trigger: CAGCTGCTGGCCCTGGAACCACACTTTGAGAACCAC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGAGGCACCTGGTCTCCTaGCCAAGATCACAGGCGATC +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEERHLVS*PRSQAI
Trigger: GATCGCCTGTGATCTTGGCCAGGAGACCAGGTGCCT...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCAGTGGGCCATGGCTTCTaGGCCCTGCCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSVGHGF*ALPGAP
Trigger: CGGAGCCCCTGGCAGGGCCCAGAAGCCATGGCCCAC...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGTACGCCCGCAAAGATaGGGATGTAGGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSVRPQR*GCRRRR
Trigger: CCGCCTCCGCCTACATCCTCATCTTTGCGGGCGTAC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTCAACCAGGAAGATaGCGAGCAACAGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGAQPGR*RATGRN
Trigger: ATTTCTGCCTGTTGCTCGTCATCTTCCTGGTTGAGC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTGCTTCCACAGCACTTaGAATCCTGCTGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGCFHST*NPAGVG
Trigger: ACCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR TCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCGCTCTGGTTGTCTCCTaGAAGGATCATTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPALVVS*KDHFPA
Trigger: GGCAGGGAAATGATCCTTTCAGGAGACAACCAGAGC...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGTGCTGAAGATGGTCTaGAACCTGGTGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGVLKMV*NLVFLR
Trigger: TCTCAGGAACACCAGGTTTCAGACCATCTTCAGCAC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGATCAAGCAGGGAGGTaGGCTGGGACCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSDQAGR*AGTSLS
Trigger: GCTGAGCGAGGTCCCAGCTCACCTCCCTGCTTGATC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGTCCTTAATGACAGCCTaGTGGCTCCTTATGGAGATG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQSLMTA*WLLMEM
Trigger: CATCTCCATAAGGAGCCATCAGGCTGTCATTAAGGA...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGACAGCACAAGCTCCCTaGCAGAAATCACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGTAQAP*QKSHRV
Trigger: GACCCTGTGTGATTTCTGTCAGGGAGCTTGTGCTGT...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGACAGCACAAGCTCCCTaGCAGAAATCACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRTAQAP*QKSHRV
Trigger: GACCCTGTGTGATTTCTGTCAGGGAGCTTGTGCTGT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCCTATTGTTATGTTTGTGCCTCTATTCAGATGCCATGTGGTACAAACTCCATCGCCCCTGCGCCCACTaGGGCTTCCTGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLLLCLCLYSDAMWYKLHRPCAH*GFLPAL
Trigger: GAGGGCCGGCAGGAAGCCTCAGTGGGCGCAGGGGCG...ATGGAGTTTGTACCACATGGCATCTGAATAGAGGCACAAACATAACAATAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCAGCACTTGAAATCCTaGTGGAGTCGGTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRQHLKS*WSRSTE
Trigger: CTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCGCTGGAGCCTCTGGTaGAAGCAGCAGGTGAGAACC +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGRWSLW*KQQVRT
Trigger: GGTTCTCACCTGCTGCTTGCACCAGAGGCTCCAGCG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGAAAGGATCATTTCCCTaGCCAGGATCTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRKGSFP*PGSGHG
Trigger: CCCATGGCCAGATCCTGGGCAGGGAAATGATCCTTT...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTTACCCCCTGCTTCCTaGCAGGGCGGCTCTACCCAG +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSLPPAS*QGGSTQ
Trigger: CTGGGTAGAGCCGCCCTGGCAGGAAGCAGGGGGTAA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCATGTGCTCATCACAGTaGAATCTGGATCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGMCSSQ*NLDQAG
Trigger: CCCTGCTTGATCCAGATTGCACTGTGATGAGCACAT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGATGTGCTCATCACAGTaGAATCTGGATCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQMCSSQ*NLDQAG
Trigger: CCCTGCTTGATCCAGATTGCACTGTGATGAGCACAT...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCCTAGGTCAGCAATGTaGTCATCACAGTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQPRSAM*SSQCNL
Trigger: CAGATTGCACTGTGATGAGCACATTGCTGACCTAGG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTCAATGATAAGGCTGTaGACAGGGCACCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGSMIRL*TGHLPV
Trigger: GACAGGCAGGTGCCCTGTGCACAGCCTTATCATTGA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCTGAGGGACAGTCCCTaGTCTTGCTTTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYLRDSP*SCFGVS
Trigger: ACTGACCCCAAAGCAAGAGCAGGGACTGTCCCTCAG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAACTGAGGGACAGTCCCTaGTCTTGCTTTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLELRDSP*SCFGVS
Trigger: ACTGACCCCAAAGCAAGAGCAGGGACTGTCCCTCAG...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATGCCTCTAGTCCCCGCCTaGCCAGCGCTCGGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: FQCLFLGTDGILLPITQMPLVPA*PALGRD
Trigger: GTCGCGGCCGAGCGCTGGGCAGGCGGGGACTAGAGG...CATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGTGGGCACAGAAGCTATaGTCTCAGGCACTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEWAQKL*SQALGG
Trigger: TCCACCGAGTGCCTGAGACCATAGCTTCTGTGCCCA...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGCTTCTGGGCATGGGTaGGGGAATCCCGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELASGHG*GNPVLN
Trigger: ATTCAGCACGGGATTCCCCCACCCATGCCCAGAAGC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTCAGGGCTTCTGGGCATaGGTGGGGGAATCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSQGFWA*VGESRA
Trigger: AGCACGGGATTCCCCCACCCATGCCCAGAAGCCCTG...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCAGGGCTTGGGGCCATaGTCTCCCAGGGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGQGLGP*SPREVS
Trigger: AGAAACCTCCCTGGGAGACCATGGCCCCAAGCCCTG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTGCAGGGTTGCGAGTTaGTCCACTCCAGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPCRVAS*STPGDV
Trigger: AACATCTCCTGGAGTGGACCAACTCGCAACCCTGCA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGPLSAA*TSHLSR
Trigger: TCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCCTGATGGCTCCTTATaGAGATGGAGAACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRPDGSL*RWRTGG
Trigger: TCCCCCAGTTCTCCATCTCCATAAGGAGCCATCAGG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGTCAGTGTTTGTACCTaGGGTGACGGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELVSVCT*GDGLGG
Trigger: ACCACCCAGCCCGTCACCCCAGGTACAAACACTGAC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCACTGGTTTAGACGCTTaGTCACTATACCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPTGLDA*SLYPQW
Trigger: CCACTGAGGGTATAGTGACCAAGCGTCTAAACCAGT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TTTCCAGAAACAGCAAGGTCAGGGCTTCTGGGCATGGGTGGGGGAATCCCGTGCAGCAGCTGCAGCTCCTaGGAACTTGTCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: FPETARSGLLGMGGGIPCSSCSS*ELVRNA
Trigger: TGCATTTCTGACAAGTTCCCAGGAGCTGCAGCTGCT...GCACGGGATTCCCCCACCCATGCCCAGAAGCCCTGACCTTGCTGTTTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGAGCAGCTGCAGCTCCTaGGAACTTGTCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGSSCSS*ELVRNA
Trigger: TGCATTTCTGACAAGTTCCCAGGAGCTGCAGCTGCT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCACATGTAAAGGAGGGTaGCTGCATCTTCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGTCKGG*LHLPLV
Trigger: CACCAAAGGAAGATGCAGCCACCCTCCTTTACATGT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTGGCCTCAACAACATTaGGCTGCCTGGAATAACGGC +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPWPQQH*AAWNNG
Trigger: GCCGTTATTCCAGGCAGCCCAATGTTGTTGAGGCCA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGATGACTCACATCCATaGGCCAGCTGCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLDDSHP*ASCFQE
Trigger: TTCCTGGAAGCAGCTGGCCCATGGATGTGAGTCATC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp TTCCAAGCCCTGGGTTGTTCTACCACTGTCTGCCGCTaGGACAAGCCATCTTTCAAGAGGCAGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FQALGCSTTVCR*DKPSFKRQSGW
Trigger: CCAGCCAGACTGCCTCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp GGCATGGACAAGGAGGTCAGATTTCCAAGCCCTGGGTaGTTCTACCACTGTCTGCCGCTTGGACAAGCCATC +
Preference number: 4 (lower is better)
Translates to: GMDKEVRFPSPG*FYHCLPLGQAI
Trigger: GATGGCTTGTCCAAGCGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAATCTGACCTCCTTGTCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp ATATTCCAACCCGTCAGCCAAGGCCACGTTTCATTCTaGCCTGCTGTCCTGACACAGGTCACCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: IFQPVSQGHVSF*PAVLTQVTQGT
Trigger: AGTCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCCTTGGCTGACGGGTTGGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCAATACTTCAAGTAGATaGTCAGCCAGTCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLNTSSR*SASRPA
Trigger: AGCAGGACGACTGGCTGATCATCTACTTGAAGTATT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCGTGCTGAAGATGGTCTaGAACCTGGTGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPVLKMV*NLVFLR
Trigger: TCTCAGGAACACCAGGTTTCAGACCATCTTCAGCAC...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGGAAAGTTCTTCCTaGAAATTCCGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQGESSS*KFRKFP
Trigger: AGGGAATTTGCGGAATTTTCAGGAAGAACTTTCCCC...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTCTTGCCTGCTGTCCTaGCACAGGTCACCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSSCLLS*HRSPRG
Trigger: TCCCCTGGGTGACCTGTGTCAGGACAGCAGGCAAGA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGATAAGTATTTATGGTaGCAGATTCTAAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCDKYLW*QILSAQ
Trigger: CTGTGCACTTAGAATCTGTCACCATAAATACTTATC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGAACAGCCATGACCACTaGCAAGCAAGTCTTAACTTT +
Preference number: 4 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLNSHDH*QASLNF
Trigger: AAAGTTAAGACTTGCTTGTCAGTGGTCATGGCTGTT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGTCCTTAATGACAGCCTaGTGGCTCCTTATGGAGATG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGSLMTA*WLLMEM
Trigger: CATCTCCATAAGGAGCCATCAGGCTGTCATTAAGGA...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTAATAAGCCAGGCTTCTaGACCCCCGGCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSNKPGF*TPGPCA
Trigger: GGCACATGGGCCGGGGGTGCAGAAGCCTGGCTTATT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGAAGAGGAGGTGGTTaGCCATTAGTAAAAATGCCG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGGRGGG*PLVKMP
Trigger: CGGCATTTTTACTAATGGCCAACCACCTCCTCTTCC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCTTGCAGATGGCATGTaGCCACATGTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGLADGM*PHVVLR
Trigger: CCTCAAGACAACATGTGGCCACATGCCATCTGCAAG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGCTTGCAGATGGCATGTaGCCACATGTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLLADGM*PHVVLR
Trigger: CCTCAAGACAACATGTGGCCACATGCCATCTGCAAG...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAATGCAGGCCTTGCAGATaGCATGTGGCCACATGTTGT +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLECRPCR*HVATCC
Trigger: ACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTTAATGAATTTGCATTaGCAACCCCAGGGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LLVSAPASSGKGSMECAGLMNLH*QPQGLL
Trigger: TAAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCCACATCGTTGGCTCTaGACTCCAACCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGPHRWL*TPTIVH
Trigger: GTGTACAATGGTTGGAGTCCAGAGCCAACGATGTGG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAATTGACCTGGGTATaGATCTGTACCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLELTWV*ICTLVS
Trigger: GCTGACGAGGGTACAGATCCATACCCAGGTCAATTC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCGAATTGACCTGGGTATaGATCTGTACCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPELTWV*ICTLVS
Trigger: GCTGACGAGGGTACAGATCCATACCCAGGTCAATTC...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGCACCTGAAGGGGAGGTaGTCAACACAACCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGHLKGR*STQPQG
Trigger: ACCCTGGGGTTGTGTTGACCACCTCCCCTTCAGGTG...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGATTCTGAAACAAAGCTaGCTCCAAGGCAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLILKQS*LQGKRA
Trigger: GGCCCTCTTGCCTTGGAGCCAGCTTTGTTTCAGAAT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCCTGATGAGAAATTCTaGGGGGTGGGGCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELPDEKF*GVGPAI
Trigger: GATTGCTGGCCCCACCCCCCAGAATTTCTCATCAGG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATAGCCTGAGGTACTCATaGACCCTGAGCGTTGTGACA +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYSLRYS*TLSVVT
Trigger: TGTCACAACGCTCAGGGTCCATGAGTACCTCAGGCT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAAGCCTGAGGTACTCATaGACCCTGAGCGTTGTGACA +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLESLRYS*TLSVVT
Trigger: TGTCACAACGCTCAGGGTCCATGAGTACCTCAGGCT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGAATACTTCAAGTAGATaGTCAGCCAGTCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGNTSSR*SASRPA
Trigger: AGCAGGACGACTGGCTGATCATCTACTTGAAGTATT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCAACAGCCATGACCACTaGCAAGCAAGTCTTAACTTT +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLNSHDH*QASLNF
Trigger: AAAGTTAAGACTTGCTTGTCAGTGGTCATGGCTGTT...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTATGGGTGCTGCTTTGTaGCAGTGCCCCCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSMGAAL*QCPLSD
Trigger: GTCACTCAGGGGGCACTGTCACAAAGCAGCACCCAT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTTTCCTGGCTGGCCATaGGCTGACCATGGTGACACG +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSFPGWP*ADHGDT
Trigger: CGTGTCACCATGGTCAGCTCATGGCCAGCCAGGAAA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCAGCACTTGAAATCCTaGTGGAGTCGGTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELQHLKS*WSRSTE
Trigger: CTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGGTTCCTGGGTTTTCTaGCGATTGTTCCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYGSWVF*RLFQVQ
Trigger: CTGAACCTGGAACAATCGGCAGAAAACCCAGGAACC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGAATCCCGTGCTGAATaGAGGAGTGCCGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSESRAE*RSAGVP
Trigger: AGGAACCCCGGCACTCCTGCATTCAGCACGGGATTC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTAATGCCAGCCCTCCCTaGCCCACCCCATGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSNASPP*PTPCFF
Trigger: GAAAAAGCATGGGGTGGGGCAGGGAGGGCTGGCATT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCCCTAGGTCAGCAATGTaGTCATCACAGTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPPRSAM*SSQCNL
Trigger: CAGATTGCACTGTGATGAGCACATTGCTGACCTAGG...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTGTGCAGGGGCCTTTTaGCTGCACGGGACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSCAGAF*LHGTEG
Trigger: ACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTGCACA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGACAGTCCCTGCTCTTaGTTTGGGGTCAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYDSPCS*FGVSVC
Trigger: ACAAACACTGACCCCAAAGCAAGAGCAGGGACTGTC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGTAAAGGAGGGTGGCTaGATCTTCCTTTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLVKEGG*IFLWCL
Trigger: CAAACACCAAAGGAAGATGCAGCCACCCTCCTTTAC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGAAGAGGAGGTGGTTaGCCATTAGTAAAAATGCCG +
Preference number: 4 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGRGGG*PLVKMP
Trigger: CGGCATTTTTACTAATGGCCAACCACCTCCTCTTCC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTTCCCTCTGTCCATGTaGGTACTTCCTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELFPLSM*VLPVLR
Trigger: CCTCAGCACAGGAAGTACCCACATGGACAGAGGGAA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGGCCTCTGTGCAGTCTaGGATATCTGGTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYGLCAV*DIWSSF
Trigger: AAACGAAGACCAGATATCCCAGACTGCACAGAGGCC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCCACTGTCTGCCGCTTaGACAAGCCATCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYPLSAA*TSHLSR
Trigger: TCTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCAGAAATGCAAATGATTaGTCTTGCCCACTCCTGATG +
Preference number: 4 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPRNAND*SCPLLM
Trigger: CATCAGGAGTGGGCAAGACCAATCATTTGCATTTCT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGTGGCCTCAACAACATTaGGCTGCCTGGAATAACGGC +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELWPQQH*AAWNNG
Trigger: GCCGTTATTCCAGGCAGCCCAATGTTGTTGAGGCCA...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTTCCAGGAATCCATCTaGCCTCAACAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPFQESI*PQQHWA
Trigger: AGCCCAATGTTGTTGAGGCCAGATGGATTCCTGGAA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCATCAACATTAGGTGCTaGAGATGGTCTGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPINIRC*RWSETW
Trigger: CCAGGTTTCAGACCATCTTCAGCACCTAATGTTGAT...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTGTTGTACAAAAAGCTaGCAGCATGGATACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGCCTKS*QHGYSV
Trigger: TACAGAGTATCCATGCTGGCAGCTTTTTGTACAACA...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCAGTTTTTGATTATCTaGATGAATCCCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LWSQALGGFAGARHKGGGQFLII*MNPRRL
Trigger: CAACCTCCTGGGATTCATGCAGATAATCAAAAACTG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCAGTTTTTGATTATCTaGATGAATCCCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQQFLII*MNPRRL
Trigger: CAACCTCCTGGGATTCATGCAGATAATCAAAAACTG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTCTTATAGTGGGCCATaGCTTCTGGGCCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGSYSGP*LLGLLT
Trigger: TGTGAGCAGGCCCAGAAGCCATGGCCCACTATAAGA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261177.10
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTGCAGGGTTGCGAGTTaGTCCACTCCAGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGCRVAS*STPGDV
Trigger: AACATCTCCTGGAGTGGACCAACTCGCAACCCTGCA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp CAGGGGCCTTTTGCCTGCACGGGACTGAAGGTGACATTCCACAGGCGTGTCCTCGTTCTCCCTTATTACTaGGGAAAGTTCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QGPFACTGLKVTFHRRVLVLPYY*GKFFLK
Trigger: TTTCAGGAAGAACTTTCCCCAGTAATAAGGGAGAAC...GAGGACACGCCTGTGGAATGTCACCTTCAGTCCCGTGCAGGCAAAAGGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGCCACATCGTTGGCTCTaGACTCCAACCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELPHRWL*TPTIVH
Trigger: GTGTACAATGGTTGGAGTCCAGAGCCAACGATGTGG...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTGGGGACCACATCGTTaGCTCTGGACTCCAACCATT +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGWGPHR*LWTPTI
Trigger: AATGGTTGGAGTCCAGAGCCAACGATGTGGTCCCCA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGAGAAATGCAAATGATTaGTCTTGCCCACTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGRNAND*SCPLLM
Trigger: CATCAGGAGTGGGCAAGACCAATCATTTGCATTTCT...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATATCAACATTAGGTGCTaGAGATGGTCTGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYINIRC*RWSETW
Trigger: CCAGGTTTCAGACCATCTTCAGCACCTAATGTTGAT...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTTCTCTCGGCCTCTGTaGAGTCTGGGATATCTGGTC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSFSRPL*SLGYLV
Trigger: GACCAGATATCCCAGACTGCACAGAGGCCGAGAGAA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTGGGGACCACATCGTTaGCTCTGGACTCCAACCATT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSWGPHR*LWTPTI
Trigger: AATGGTTGGAGTCCAGAGCCAACGATGTGGTCCCCA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTCGGGAGGAATTGACCTaGGTATGGATCTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSREELT*VWICTL
Trigger: GAGGGTACAGATCCATACCCAGGTCAATTCCTCCCG...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGACTGGTTTAGACGCTTaGTCACTATACCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELTGLDA*SLYPQW
Trigger: CCACTGAGGGTATAGTGACCAAGCGTCTAAACCAGT...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCAAGTTTGAGAACGACTaGTTTAGACGCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPKFEND*FRRLVT
Trigger: AGTGACCAAGCGTCTAAACCAGTCGTTCTCAAACTT...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGCTCAACCAGGAAGATaGCGAGCAACAGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSAQPGR*RATGRN
Trigger: ATTTCTGCCTGTTGCTCGTCATCTTCCTGGTTGAGC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGGTAAAGGAGGGTGGCTaGATCTTCCTTTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGVKEGG*IFLWCL
Trigger: CAAACACCAAAGGAAGATGCAGCCACCCTCCTTTAC...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTCTTTGTTTGGGGGTTTaGCTCTCTGCGATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLILCLGV*LSAIQS
Trigger: GCTCTGAATCGCAGAGAGGCAAACCCCCAAACAAAG...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTTAATGAATTTGCATTaGCAACCCCAGGGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPLMNLH*QPQGLL
Trigger: TAAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GTCAAGTGTCTTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCAAATACTTCAAGTAGATaGTCAGCCAGTCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VKCLLPHHGSRKPSYALSNTSSR*SASRPA
Trigger: AGCAGGACGACTGGCTGATCATCTACTTGAAGTATT...TGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAAGACACTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp GTCAAGTGTCTTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATCCCAATTACCCAGATaGTTGCTTCAAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: VKCLLPHHGSRKPSYALSSQLPR*LLQVDR
Trigger: TCTGTCCACTTGAAGCAATCATCTGGGTAATTGGGA...TGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAAGACACTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGTGTTGTACAAAAAGCTaGCAGCATGGATACTCTGTA +
Preference number: 4 (lower is better)
Translates to: RPCRWHVATCCLEGQLEECCTKS*QHGYSV
Trigger: TACAGAGTATCCATGCTGGCAGCTTTTTGTACAACA...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GCAGATTCCTTGAAGTTAGGTAAGTTGCCCAAGGCTCCACCATTAGTAGTCAGCTCCAAAAGGCGCTGGTaGAACAAGTTAGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ADSLKLGKLPKAPPLVVSSKRRW*NKLVGK
Trigger: CTTCCCCACTAACTTGTTGCACCAGCGCCTTTTGGA...GCTGACTACTAATGGTGGAGCCTTGGGCAACTTACCTAACTTCAAGGAATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCACTGCATTTACTGAATaGAACCCCAACAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFTAFTE*NPNRLE
Trigger: TTCTAGCCTGTTGGGGTTGCATTCAGTAAATGCAGT...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp TGGAAGACCTCACCCAGGCAGGCTCCTGAGGAGAGTTGCCATAGAGATTATTTTCATGTCCCCCACTTCTaGATTTGCCTTTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: WKTSPRQAPEESCHRDYFHVPHF*ICLSEM
Trigger: CATCTCAGAAAGGCAAATGCAGAAGTGGGGGACATG...AAAATAATCTCTATGGCAACTCTCCTCAGGAGCCTGCCTGGGTGAGGTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGTTCTCCCTTATTACTaGGGAAAGTTCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: CRPCRWHVATCCLEGQLEVLPYY*GKFFLK
Trigger: TTTCAGGAAGAACTTTCCCCAGTAATAAGGGAGAAC...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGAAGTTTGAGAACGACTaGTTTAGACGCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELKFEND*FRRLVT
Trigger: AGTGACCAAGCGTCTAAACCAGTCGTTCTCAAACTT...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTTTCCAGGAATCCATCTaGCCTCAACAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSFQESI*PQQHWA
Trigger: AGCCCAATGTTGTTGAGGCCAGATGGATTCCTGGAA...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGGGGAAAGTTCTTCCTaGAAATTCCGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSGESSS*KFRKFP
Trigger: AGGGAATTTGCGGAATTTTCAGGAAGAACTTTCCCC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR GCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCAGTGGTACAAACTCCATaGCAACCTGCAGACCCAATT +
Preference number: 4 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSVVQTP*QPADPI
Trigger: AATTGGGTCTGCAGGTTGGCATGGAGTTTGTACCAC...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp AGCCTATTGTTATGTTTGTGCCTCTATTCAGATGCCATGTGGTACAAACTCCATGAGCATGGGTACAGCTaGCTGCAAAGCCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SLLLCLCLYSDAMWYKLHEHGYS*LQSLHS
Trigger: AGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC...ATGGAGTTTGTACCACATGGCATCTGAATAGAGGCACAAACATAACAATAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp AGTCAGCAGAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTACCATGAAAGGTGAATaGATTTCAGTGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: SQQSMGTAACKACTLVTLTMKGE*ISVENK
Trigger: CTTGTTTTCCACTGAAATCCATTCACCTTTCATGGT...AAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTCTGCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCACTGCATTTGCCTTTCTaGGATGCTTCTAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSLHLPF*DASKTL
Trigger: CAGAGTCTTAGAAGCATCTCAGAAAGGCAAATGCAG...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp GCCTTGCCATGTCTACCCATCCTAAACTCTCACATCATGGTCTTTCCCAATCTTGTGCCTCTATTCAGATaGCATGTGGTACAAACTCCA +
Preference number: 4 (lower is better)
Translates to: ALPCLPILNSHIMVFPNLVPLFR*HVVQTP
Trigger: TGGAGTTTGTACCACATGGCATCTGAATAGAGGCAC...AAGATTGGGAAAGACCATGATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR GCA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTGCTCCTGAGGAGAGTTaGCATAGAGATTATTTTCAT +
Preference number: 4 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLIAPEES*HRDYFH
Trigger: ATGAAAATAATCTCTATGGCAACTCTCCTCAGGAGC...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
3UTR CAA 72 bp TCATCCTTCAGAGAACTTGGGAGTCATAGTCAGTTTTaGATTATCTGCATGAATCCCAGGAGGTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSFRELGSHSQF*IICMNPRRLEG
Trigger: GCCCTCCAACCTCCTGGGATTCATGCAGATAATCAAAAACTGACTATGACTCCCAAGTTCTCTGAAGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
3UTR CAA 72 bp AAAGCCCTTCCAGGTGATTCTGATACTCACCGAAGTTaGAGAACGACTGGTTTAGACGCTTGGTCACTATAC +
Preference number: 4 (lower is better)
Translates to: KALPGDSDTHRS*RTTGLDAWSLY
Trigger: GTATAGTGACCAAGCGTCTAAACCAGTCGTTCTCAAACTTCGGTGAGTATCAGAATCACCTGGAAGGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGATAAGTATTTATGGTaGCAGATTCTAAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSDKYLW*QILSAQ
Trigger: CTGTGCACTTAGAATCTGTCACCATAAATACTTATC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR TCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCATGCCTTATCATGGGTTaGTTTGGTGGTATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSCLIMG*FGGIFR
Trigger: CCTGAAAATACCACCAAATCAACCCATGATAAGGCA...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp AGCCTATTGTTATGTTTGTGCCTCTATTCAGATGCCATGTGGTACAAACTCCATCTGCAAGAAAGACCCTaGAAACTCAGACATGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLLLCLCLYSDAMWYKLHLQERP*KLRHVP
Trigger: GGGGACATGTCTGAGTTTTCAGGGTCTTTCTTGCAG...ATGGAGTTTGTACCACATGGCATCTGAATAGAGGCACAAACATAACAATAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp TATATATTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGACTACACTCCTCTaGAAGACCTCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YIFQCLFLGTDGILLPITQTTLL*KTSPRQ
Trigger: CTGCCTGGGTGAGGTCTTCCAGAGGAGTGTAGTCTG...GGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAATATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCACCCATGGTTGATCGTTaGTCTTTGATTTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSPMVDR*SLIWKI
Trigger: TATCTTCCAAATCAAAGATCAACGATCAACCATGGG...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp GCCTTGCCATGTCTACCCATCCTAAACTCTCACATCATGGTCTTTCCCAATCTTTCTATTTTTGGGAACTaGTGGTATTCTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ALPCLPILNSHIMVFPNLSIFGN*WYSAPN
Trigger: ATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGA...AAGATTGGGAAAGACCATGATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTATAGCATCTAATGACTaGTTTATTCTCCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLIIASND*FILQDS
Trigger: AGAGTCTTGGAGAATAAACCAGTCATTAGATGCTAT...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp TTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCCAGATGTATTCAGATGCCATGTaGTACAAACTCCATGCCAAC +
Preference number: 4 (lower is better)
Translates to: FQCLFLGTDGILLPITQMYSDAM*YKLHAN
Trigger: GTTGGCATGGAGTTTGTACCACATGGCATCTGAATA...CATCTGGGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp AGCCTATTGTTATGTTTGTGCCTCTATTCAGATGCCATGTGGTACAAACTCCATGCTAGAAATTATCATTaGATTGCAGCTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLLCLCLYSDAMWYKLHARNYH*IAAGEA
Trigger: TGCTTCCCCAGCTGCAATTCAATGATAATTTCTAGC...ATGGAGTTTGTACCACATGGCATCTGAATAGAGGCACAAACATAACAATAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR TCA 90 bp CACAAAGCCTATTGTTATGTTTGTGCCTCTATTCAGATGCCATGTGGTACAAACGAATTCACCCATGGTTaGTCGTTGATCTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: HKAYCYVCASIQMPCGTNEFTHG*SLIFDL
Trigger: CAAATCAAAGATCAACGATCAACCATGGGTGAATTC...GTTTGTACCACATGGCATCTGAATAGAGGCACAAACATAACAATAGGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp TATATATTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCTCATTGAATTGCAGCTaGGGAAGCAGATTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YIFQCLFLGTDGILLPITSLNCS*GSRFLE
Trigger: TTCAAGGAATCTGCTTCCCCAGCTGCAATTCAATGA...GGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAATATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CCA 90 bp CTAATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTGCCTTGCCATGTCTAGCTATGCCTTATCATaGGTTGATTTGGTGGTATTT +
Preference number: 4 (lower is better)
Translates to: LMTGLFSKTLQNSCLAMSSYALS*VDLVVF
Trigger: AAATACCACCAAATCAACCCATGATAAGGCATAGCT...AGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS GCA 90 bp CGTGTGGGCAGCCCGGCCCGCGCCCCTGCGCCCACTGAGGCTTCCTaGCGGCCCTCTAGTCCCCGCCTGCCCAGCGCTCGGCCGCGACGC +
Preference number: 5 (lower is better)
Translates to: RVGSPARAPAPTEAS*RPSSPRLPSARPRR
Trigger: GCGTCGCGGCCGAGCGCTGGGCAGGCGGGGACTAGAGGGCCGGCAGGAAGCCTCAGTGGGCGCAGGGGCGCGGGCCGGGCTGCCCACACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCAGTTCAGGGCTCTGTaGGGGTCAGCACTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LLVSAPASSGKGSMECAGQFRAL*GSALGG
Trigger: GCCACCCAGTGCTGACCCCAACAGAGCCCTGAACTG...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS GCA 90 bp GGCACCTGGCGGCCCTCGGCCTCCCGCAACAGGATGTACGTGCTGTaGTGCCAGTCGGCTGAGCTGTTGCTTCCACAGCACTTGAAATCC +
Preference number: 5 (lower is better)
Translates to: GTWRPSASRNRMYVL*CQSAELLLPQHLKS
Trigger: GGATTTCAAGTGCTGTGGAAGCAACAGCTCAGCCGACTGGCAGCACAGCACGTACATCCTGTTGCGGGAGGCCGAGGGCCGCCAGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCACTAGAGGCCAGGGCTaGGGGCCATGGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPTRGQG*GPWSPR
Trigger: CCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCTCAGCAGCTCCGACTTaGCAGGGTTGCGAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCSAAPT*QGCELV
Trigger: GACCAACTCGCAACCCTGCAAAGTCGGAGCTGCTGA...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGACGGGCCTTAGCCCTTaGGGCTCTTGGCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLTGLSP*GSWPLP
Trigger: AGGCAGTGGCCAAGAGCCCAAAGGGCTAAGGCCCGT...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGTTTCCAAGCCCTGGGTaGTTCTACCACTGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: GRALLLVSAPASSGKGSMFPSPG*FYHCLP
Trigger: CGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAA...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGACGCGCCCTTCTCTaGGTGTCTGCCCCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGGRALL*VSAPAS
Trigger: GCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGGACGCGCCCTTCTCTaGGTGTCTGCCCCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRGRALL*VSAPAS
Trigger: GCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGACGGGCCTTAGCCCTTaGGGCTCTTGGCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQTGLSP*GSWPLP
Trigger: AGGCAGTGGCCAAGAGCCCAAAGGGCTAAGGCCCGT...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS TCA 90 bp GCTGTTGCTTCCACAGCACTTGAAATCCTGCTGGAGTCGGTCCACTaGGGCGGTGATCTGCGTGGCTCCGGGCTGCCCGTAGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: AVASTALEILLESVH*GGDLRGSGLPVVLS
Trigger: GCTGAGAACTACGGGCAGCCCGGAGCCACGCAGATCACCGCCTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGTTGCTTCCACAGCACTaGAAATCCTGCTGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: GRALLLVSAPASSGKGSMLLPQH*KSCWSR
Trigger: CCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCAA...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGACGCGCCCTTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGCAGTCGGCTGAGCTGTaGCTTCCACAGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: GRALLLVSAPASSGKGSMQSAEL*LPQHLK
Trigger: TTTCAAGTGCTGTGGAAGCAACAGCTCAGCCGACTG...CATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAAGGGCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCACTAGAGGCCAGGGCTaGGGGCCATGGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPTRGQG*GPWSPR
Trigger: CCTGGGAGACCATGGCCCCAAGCCCTGGCCTCTAGT...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTCCGACTTTGCAGGGTaGCGAGTTGGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLSDFAG*RVGPLQ
Trigger: CTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGGA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCGGGTCCCTATGGGTGTaGTACAAAAAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCGSLWV*YKKLPA
Trigger: TGCTGGCAGCTTTTTGTACAACACCCATAGGGACCC...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGGACCTCGCTCAGCCTaGGCCTTAGCACAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGGPRSA*ALAQGA
Trigger: GGCACCTTGTGCTAAGGCCAAGGCTGAGCGAGGTCC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGAGGAACTGCTCCAGCTaGGTGAGGCAGCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLRNCSS*VRQPPS
Trigger: GGAGGGAGGCTGCCTCACCAAGCTGGAGCAGTTCCT...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTGGCCACATGTTGTCTaGAGGGGCAGTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLWPHVV*RGSWKR
Trigger: CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGCAGCACTGGGTGGCCTaGAGGCCACTCCTATGTATG +
Preference number: 5 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQQHWVA*RPLLCM
Trigger: CATACATAGGAGTGGCCTCAAGGCCACCCAGTGCTG...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCCAGCACTGGGTGGCCTaGAGGCCACTCCTATGTATG +
Preference number: 5 (lower is better)
Translates to: LWSQALGGFAGARHKGGGQHWVA*RPLLCM
Trigger: CATACATAGGAGTGGCCTCAAGGCCACCCAGTGCTG...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGGGACAGTCCCTGCTCTaGCTTTGGGGTCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLGQSLL*LWGQCL
Trigger: CAAACACTGACCCCAAAGCAAGAGCAGGGACTGTCC...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCAATAACGGCTGGCACTaGCACAGGGCAGGGTATGGG +
Preference number: 5 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPNNGWH*HRAGYG
Trigger: CCCATACCCTGCCCTGTGCAAGTGCCAGCCGTTATT...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp TGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAAGGAACTGCTCCAGCTaGGTGAGGCAGCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: CRPCRWHVATCCLEGQLERNCSS*VRQPPS
Trigger: GGAGGGAGGCTGCCTCACCAAGCTGGAGCAGTTCCT...TTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCAACCGGCCCCGAGGCTGGGCTTCCCTCTGTCCATGTGGGTACTTCCTGTGCCACTCCAGGAGATGTTaGACACCCATCAACATTAGG +
Preference number: 5 (lower is better)
Translates to: GNRPRGWASLCPCGYFLCHSRRC*TPINIR
Trigger: CCTAATGTTGATGGGTGTCAAACATCTCCTGGAGTG...GCACAGGAAGTACCCACATGGACAGAGGGAAGCCCAGCCTCGGGGCCGGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCTTGCAGGGTTGCGAGTaGGTCCACTCCAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: LWSQALGGFAGARHKGGGLQGCE*VHSRRC
Trigger: ACATCTCCTGGAGTGGACCAACTCGCAACCCTGCAA...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGGACCTCGCTCAGCCTaGGCCTTAGCACAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RPCRWHVATCCLEGQLEEGPRSA*ALAQGA
Trigger: GGCACCTTGTGCTAAGGCCAAGGCTGAGCGAGGTCC...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATCAGTTCAGGGCTCTGTaGGGGTCAGCACTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYQFRAL*GSALGG
Trigger: GCCACCCAGTGCTGACCCCAACAGAGCCCTGAACTG...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp TTCTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGCCACGTTTCATTCTaGCCTGCTGTCCTGACACAG +
Preference number: 5 (lower is better)
Translates to: FSWCLPLRAQGRAAWSVQGHVSF*PAVLTQ
Trigger: CTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCC...CTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTCAGCAGCTCCGACTTaGCAGGGTTGCGAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGSAAPT*QGCELV
Trigger: GACCAACTCGCAACCCTGCAAAGTCGGAGCTGCTGA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCGGGTCCCTATGGGTGTaGTACAAAAAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LWSQALGGFAGARHKGGGGSLWV*YKKLPA
Trigger: TGCTGGCAGCTTTTTGTACAACACCCATAGGGACCC...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGCCAGGTGTGGGGTTCTaGTGTAGTGAATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRPGVGF*CSEWAA
Trigger: GGCAGCCCATTCACTACACAAGAACCCCACACCTGG...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCACCACTGTCTGCCGCTaGGACAAGCCATCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LWSQALGGFAGARHKGGGTTVCR*DKPSFK
Trigger: CTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTTTGTACCTGGGGTGACGGGCTGGGTGGTCGTCACGGGCCTTAGCCCTTTGTGGAAGAGGAGGTGGTaGGCCATTAGTAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: VFVPGVTGWVVVTGLSPLWKRRW*AISKNA
Trigger: GGCATTTTTACTAATGGCCAACCACCTCCTCTTCCA...CAAAGGGCTAAGGCCCGTGACGACCACCCAGCCCGTCACCCCAGGTACAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTGGCCACATGTTGTCTaGAGGGGCAGTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGWPHVV*RGSWKR
Trigger: CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGTGGCCACATGTTGTCTaGAGGGGCAGTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRWPHVV*RGSWKR
Trigger: CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCA...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTTGCAGGGTTGCGAGTaGGTCCACTCCAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGLQGCE*VHSRRC
Trigger: ACATCTCCTGGAGTGGACCAACTCGCAACCCTGCAA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGTCCGACTTTGCAGGGTaGCGAGTTGGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: RPCRWHVATCCLEGQLEESDFAG*RVGPLQ
Trigger: CTGGAGTGGACCAACTCGCAACCCTGCAAAGTCGGA...CTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGTTCGTTTTAATGAATTaGCATTGGCAACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LLVSAPASSGKGSMECAGFVLMN*HWQPQG
Trigger: GCCCTGGGGTTGCCAATGCAAATTCATTAAAACGAA...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTCTTGGTGTCTGCCCCTGCGAGCTCAGGGAAGGGCAGCATGGAGTGTGCAGGGGATACTCACCGAAGTTaGAGAACGACTGGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LLVSAPASSGKGSMECAGDTHRS*RTTGLD
Trigger: GTCTAAACCAGTCGTTCTCAAACTTCGGTGAGTATC...CCCTGCACACTCCATGCTGCCCTTCCCTGAGCTCGCAGGGGCAGACACCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS CCA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTaGAAGAGGAGGTGGTTGGCCATTAGTAAAAATGCCGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GLADGMWPHVVLRGS*KRRWLAISKNAAGA
Trigger: GGCTCCAGCGGCATTTTTACTAATGGCCAACCACCTCCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGAAGAGGTTGCTTCCACAGCACTaGAAATCCTGCTGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: GLADGMWPHVVLRGSWKRLLPQH*KSCWSR
Trigger: CCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCAA...CCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp GGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGAAGGGAAGCAGAGCTGGACCCTTGCTTCCACAGCACTaGAAATCCTGCTGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: GKSSVHSRTGGKGSRAGPLLPQH*KSCWSR
Trigger: CCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCAA...GGGTCCAGCTCTGCTTCCCTTCCCACCTGTCCTAGAGTGGACAGAGCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGCAGTCGGCTGAGCTGTaGCTTCCACAGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGQSAEL*LPQHLK
Trigger: TTTCAAGTGCTGTGGAAGCAACAGCTCAGCCGACTG...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTAGGAACTGCTCCAGCTaGGTGAGGCAGCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSRNCSS*VRQPPS
Trigger: GGAGGGAGGCTGCCTCACCAAGCTGGAGCAGTTCCT...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCTGGAAGAGGAGGTGGTaGGCCATTAGTAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPWKRRW*AISKNA
Trigger: GGCATTTTTACTAATGGCCAACCACCTCCTCTTCCA...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTGGGTTTTCTGCCGATaGTTCCAGGTTCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGWVFCR*FQVQEL
Trigger: CAGCTCCTGAACCTGGAACAATCGGCAGAAAACCCA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCCACTCCAGGAGATGTTaGACACCCATCAACATTAGG +
Preference number: 5 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPHSRRC*TPINIR
Trigger: CCTAATGTTGATGGGTGTCAAACATCTCCTGGAGTG...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGGCCACGTTTCATTCTaGCCTGCTGTCCTGACACAG +
Preference number: 5 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYGHVSF*PAVLTQ
Trigger: CTGTGTCAGGACAGCAGGCAAGAATGAAACGTGGCC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CAACAACATTGGGCTGCCTGGAATAACGGCTGGCACTTGCACAGGGCAGGGTATGGACAGTCCCTGCTCTaGCTTTGGGGTCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: QQHWAAWNNGWHLHRAGYGQSLL*LWGQCL
Trigger: CAAACACTGACCCCAAAGCAAGAGCAGGGACTGTCC...ATACCCTGCCCTGTGCAAGTGCCAGCCGTTATTCCAGGCAGCCCAATGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGTGGAGAGTGGGCAGGTCAAAGGGCAAGGTCTTCTGGGGGAAATGCCAGCCCTTCGTTTTAATGAATTaGCATTGGCAACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: VWRVGRSKGKVFWGKCQPFVLMN*HWQPQG
Trigger: GCCCTGGGGTTGCCAATGCAAATTCATTAAAACGAA...GGGCTGGCATTTCCCCCAGAAGACCTTGCCCTTTGACCTGCCCACTCTCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGGACTGGTTTAGACGCTaGGTCACTATACCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLDWFRR*VTIPSV
Trigger: CACTGAGGGTATAGTGACCAAGCGTCTAAACCAGTC...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTGAGGGGCAGTTGTGGAAGAGGAGGTGGTaGGCCATTAGTAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: LCRPCRWHVATCCLEGQLWKRRW*AISKNA
Trigger: GGCATTTTTACTAATGGCCAACCACCTCCTCTTCCA...CAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTCCAGGTGTGGGGTTCTaGTGTAGTGAATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSPGVGF*CSEWAA
Trigger: GGCAGCCCATTCACTACACAAGAACCCCACACCTGG...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGACCACTGTCTGCCGCTaGGACAAGCCATCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELTTVCR*DKPSFK
Trigger: CTTGAAAGATGGCTTGTCCAAGCGGCAGACAGTGGT...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTGATGCAAGAGAGAACCCAAGGAAAAAGCTCTGTCCACTCTAGGACAGGTGGGTTTCCAAGCCCTGGGTaGTTCTACCACTGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: VMQERTQGKSSVHSRTGGFPSPG*FYHCLP
Trigger: CGGCAGACAGTGGTAGAACAACCCAGGGCTTGGAAA...CCCACCTGTCCTAGAGTGGACAGAGCTTTTTCCTTGGGTTCTCTCTTGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGATACTCACCGAAGTTaGAGAACGACTGGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGDTHRS*RTTGLD
Trigger: GTCTAAACCAGTCGTTCTCAAACTTCGGTGAGTATC...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGTTTAATGAATTTGCATaGGCAACCCCAGGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGFNEFA*ATPGPF
Trigger: AAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAAA...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp AGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGCATCCTTCAGAGAACTaGGGAGTCATAGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SYGLRHSVDSQELGTKEGHPSEN*GVIVSF
Trigger: AAAACTGACTATGACTCCCAAGTTCTCTGAAGGATG...CCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GAGCATGGGTACAGCTGCCTGCAAAGCCTGCACTCTTGTCACTCTTCTACCTTCTCTTTGTTTGGGGGTTaGCCTCTCTGCGATTCAGAG +
Preference number: 5 (lower is better)
Translates to: EHGYSCLQSLHSCHSSTFSLFGG*PLCDSE
Trigger: CTCTGAATCGCAGAGAGGCAAACCCCCAAACAAAGA...GAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGCAGGCAGCTGTACCCATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp GCCTTGCCATGTCTACCCATCCTAAACTCTCACATCATGGTCTTTCCCAATCTTCGAGCTGCCGGCTCTTaGTTTGGGGGTTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: ALPCLPILNSHIMVFPNLRAAGS*FGGLPL
Trigger: GAGAGGCAAACCCCCAAACAAAGAGCCGGCAGCTCG...AAGATTGGGAAAGACCATGATGTGAGAGTTTAGGATGGGTAGACATGGCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS TCA 90 bp CTAACTCTGCAGGCCTTGCAGATGGCATGTGGCCACATGTTGTCTTaGGGGGCAGTTGGAAGAGGAGGTGGTTGGCCATTAGTAAAAATG +
Preference number: 5 (lower is better)
Translates to: LTLQALQMACGHMLS*GAVGRGGGWPLVKM
Trigger: CATTTTTACTAATGGCCAACCACCTCCTCTTCCAACTGCCCCTCAAGACAACATGTGGCCACATGCCATCTGCAAGGCCTGCAGAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS-3UTR CAA 90 bp AAGCTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGTTTAATGAATTTGCATaGGCAACCCCAGGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: KLWSQALGGFAGARHKGGFNEFA*ATPGPF
Trigger: AAAAGGCCCTGGGGTTGCCAATGCAAATTCATTAAA...CCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp CTATGGTCTCAGGCACTCGGTGGATTCGCAGGAGCTAGGCACAAAGGAGGGGGCAGTCATAGTCAGTTTTaGATTATCTGCATGAATCCC +
Preference number: 5 (lower is better)
Translates to: LWSQALGGFAGARHKGGGSHSQF*IICMNP
Trigger: GGGATTCATGCAGATAATCAAAAACTGACTATGACT...GCCCCCTCCTTTGTGCCTAGCTCCTGCGAATCCACCGAGTGCCTGAGACCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGACTGGTTTAGACGCTaGGTCACTATACCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSDWFRR*VTIPSV
Trigger: CACTGAGGGTATAGTGACCAAGCGTCTAAACCAGTC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGTCAGCAATGTGCTCATCACAGTGCAATCTGGATCAAGCAGGGAGGTGAGCTGGCAGCTCCTGGGAACTaGTCAGAAATGCAAATGATT +
Preference number: 5 (lower is better)
Translates to: GQQCAHHSAIWIKQGGELAAPGN*SEMQMI
Trigger: AATCATTTGCATTTCTGACAAGTTCCCAGGAGCTGC...CAGCTCACCTCCCTGCTTGATCCAGATTGCACTGTGATGAGCACATTGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GTCAAGTGTCTTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCAGACTCTTCAAAACTCTaGCCTTGCCATGTCTACCCA +
Preference number: 5 (lower is better)
Translates to: VKCLLPHHGSRKPSYALSDSSKL*PCHVYP
Trigger: TGGGTAGACATGGCAAGGCAAGAGTTTTGAAGAGTC...TGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAAGACACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp CCTGAAAACTCAGACATGTCCCCCACTTCTGCATTTGCCTTTCTGAGATGCTTCGGGGAAGCAGATTCCTaGAAGTTAGGTAAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: PENSDMSPTSAFAFLRCFGEADS*KLGKLP
Trigger: GGGCAACTTACCTAACTTCAAGGAATCTGCTTCCCC...GAAGCATCTCAGAAAGGCAAATGCAGAAGTGGGGGACATGTCTGAGTTTTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTGCAGCTCCTGGGAACTaGTCAGAAATGCAAATGATT +
Preference number: 5 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSAAPGN*SEMQMI
Trigger: AATCATTTGCATTTCTGACAAGTTCCCAGGAGCTGC...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp GGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTGGTGGTATTTTCAGCAAAGCCTGCACTCTaGTCACTCTTCTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: GSRKPSYALSWVDLVVFSAKPAL*SLFYLL
Trigger: GAGAAGGTAGAAGAGTGACAAGAGTGCAGGCTTTGC...TGAAAATACCACCAAATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp ATCACGCACTATACCATTTCTCTCGGCCTCTGTGCAGTCTGGGATATCTGGTCTCATCCTTCAGAGAACTaGGGAGTCATAGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: ITHYTISLGLCAVWDIWSHPSEN*GVIVSF
Trigger: AAAACTGACTATGACTCCCAAGTTCTCTGAAGGATG...AGACCAGATATCCCAGACTGCACAGAGGCCGAGAGAAATGGTATAGTGCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261177.10
ENST00000546076.6
CDS-3UTR CAA 90 bp TTCTCCCTCACCATGGTAGCAGGAAGCCCAGCTATGCCTTATCATGGGTTGATTTTCCAGTGTCTATTTTaGGGAACTGATGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: FSLTMVAGSPAMPYHGLIFQCLF*GTDGIL
Trigger: CAGAATACCATCAGTTCCCAAAAATAGACACTGGAA...AATCAACCCATGATAAGGCATAGCTGGGCTTCCTGCTACCATGGTGAGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp CTAATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTGCCTTGCCATGTCTAAAGAACCGGACCCTTaGTACAGCAGGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: LMTGLFSKTLQNSCLAMSKEPDP*YSRART
Trigger: TGTTCTAGCCCTGCTGTACAAAGGGTCCGGTTCTTT...AGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp CTAATGACTGGTTTATTCTCCAAGACTCTTCAAAACTCTTGCCTTGCCATGTCTATGCCTTATCATGGGTaGATTTGGTGGTATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LMTGLFSKTLQNSCLAMSMPYHG*IWWYFQ
Trigger: CTGAAAATACCACCAAATCAACCCATGATAAGGCAT...AGACATGGCAAGGCAAGAGTTTTGAAGAGTCTTGGAGAATAAACCAGTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS-3UTR CAA 90 bp TATATATTCCAGTGTCTATTTTTGGGAACTGATGGTATTCTGCTCCCAATTACCTTCAAAACTCTTGCCTaGCCATGTCTACCCATCCTA +
Preference number: 5 (lower is better)
Translates to: YIFQCLFLGTDGILLPITFKTLA*PCLPIL
Trigger: TAGGATGGGTAGACATGGCAAGGCAAGAGTTTTGAA...GGTAATTGGGAGCAGAATACCATCAGTTCCCAAAAATAGACACTGGAATATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS GCA 72 bp AGCCCGGCCCGCGCCCCTGCGCCCACTGAGGCTTCCTaGCGGCCCTCTAGTCCCCGCCTGCCCAGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: SPARAPAPTEAS*RPSSPRLPSAR
Trigger: CCGAGCGCTGGGCAGGCGGGGACTAGAGGGCCGGCAGGAAGCCTCAGTGGGCGCAGGGGCGCGGGCCGGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545802.1
CDS CCA 72 bp GCCACCCCGATGCCCACTGCCCCCATAAGCAGCAGGTaGTCGGCCAGGAACTGCTCCAGCTTGGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: ATPMPTAPISSR*SARNCSSLVRQ
Trigger: CTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCACCTGCTGCTTATGGGGGCAGTGGGCATCGGGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS TCA 72 bp TCCACAGCACTTGAAATCCTGCTGGAGTCGGTCCACTaGGGCGGTGATCTGCGTGGCTCCGGGCTGCCCGTA +
Preference number: 6 (lower is better)
Translates to: STALEILLESVH*GGDLRGSGLPV
Trigger: TACGGGCAGCCCGGAGCCACGCAGATCACCGCCTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6
CDS TCA 72 bp GCAGCAGGTGGTCGGCCAGGAACTGCTCCAGCTTGGTaGGGCAGCCTCCCTCCACCTTATAGATGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: AAGGRPGTAPAW*GSLPPPYRCWR
Trigger: CCTCCAACATCTATAAGGTGGAGGGAGGCTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261177.10
ENST00000535215.5
ENST00000546076.6