Pregenerated sensors for TSPAN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000117472Ensembl transcript IDs: ENST00000372003.6, ENST00000464786.5, ENST00000469330.5, ENST00000470318.1, ENST00000472170.1, ENST00000475163.5, ENST00000482143.5, ENST00000482928.5, ENST00000498443.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCCAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTaGTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LAQVTLLDPVPSPNH*CLPGCLFTVPMWQQ Trigger: CTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR GCA 90 bp | CTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAATaGCCCCCACCCATCCACCCACCAATGGAAGGAAAGTCAGGCATC | + |
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Preference number: 1 (lower is better) Translates to: LGEWATELATLEALE*PPPIHPPMEGKSGI Trigger: GATGCCTGACTTTCCTTCCATTGGTGGGTGGATGGGTGGGGGGCATTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR CAA 90 bp | CAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATaGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QVWSRKGRSILAQVT*LDPVPSPNHCCLPG Trigger: CCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTCCAATCACTGCTGCTTaGCAGGGTGCCTCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PYLAPSLEQKGQVHSGPSPITAA*QGASSQ Trigger: CTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGG...ACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATTGTTAGATCCTCCCCCAATCACTGCTaGTTGCCAGGGTGCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SLEQKGQVHSGPSDIVRSSPNHC*LPGCLF Trigger: GAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGA...GGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR-3UTR GCA 90 bp | TTTAATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAACCCTCCCCCAATCACTaGTGCTTGCCAGGGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FNRLGEWATELATLEALEPSPNH*CLPGCL Trigger: GAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGG...TTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTAAGGGTTTAATAGACTaGGGGAATGGGCAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: CNRFMHFEVPSTHPPRGSKGLID*GNGQQN Trigger: GTTCTGTTGCCCATTCCCCCAGTCTATTAAACCCTT...AGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCCCCAATCACTGCTGCTaGCCAGGGTGCCTCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: WSLSSPKSGAERAGPFWPPNHCC*PGCLFT Trigger: TGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGG...GGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGGACCA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR GCA 72 bp | TGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAATaGCCCCCACCCATCCACCCACCAATGGAAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: WATELATLEALE*PPPIHPPMEGK Trigger: CTTTCCTTCCATTGGTGGGTGGATGGGTGGGGGGCATTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR GCA 72 bp | GTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTaGTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: VTLLDPVPSPNH*CLPGCLFTVPM Trigger: CATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | TCCCCCAGTAGAGCACTGGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTGCCCCCAATTCCAGCTaGCACACCACCCACGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SPSRALGSPLGLGGISRVAPNSS*HTTHGD Trigger: GTCACCGTGGGTGGTGTGGCAGCTGGAATTGGGGGC...AACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCCAGTGCTCTACTGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCCCTCCCCCAATCACTaGTGCTTGCCAGGGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VTLLDPVPSPNHCCLPGCPSPNH*CLPGCL Trigger: GAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGG...GCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GGTCCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCACGATTGACACCCAGATaGCCACTGCCAACAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPYLAPSLEQKGQVHSGPRLTPR*PLPTGL Trigger: CAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCG...TGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | CTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGCTGCTTGCCAGGGTaGCTCTTCACAGTTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LSPPPITAACQGASSQFPCCLPG*LFTVPM Trigger: CATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCA...TGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | CTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCACTTGGCAGTGAGTTCTaGAAGAGGGAACTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPPPITAACQGASSQFPLGSEF*KRELLR Trigger: CCTCAGCAGTTCCCTCTTTCAGAACTCACTGCCAAG...TGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | CAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGGGATGCCCCATCGATTaGCACCCAGATGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: QVTLLDPVPSPNHCCLPGGCPID*HPDAHC Trigger: GCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCC...CCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | TGGTCCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCGGAAGTAGCCCACGTTaGCAAACTGCATGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: WSLSSPKSGAERAGPFWPGSSPR*QTAWHW Trigger: CCAGTGCCATGCAGTTTGTCAACGTGGGCTACTTCC...GGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | AGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATTGTTAGATCCTGTCCCCGGTGTTGCCACTGAGTaGGCAGGCAGAGGGACGCCT | + |
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Preference number: 4 (lower is better) Translates to: SRKGRSILAQVTLLDPVPGVATE*AGRGTP Trigger: AGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACC...GGGGACAGGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | GCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGACAAACTGCATGGCACTaGACGACAGTGGCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: AACQGASSQFPCGSSSGRQTAWH*TTVARR Trigger: TCTTCGGGCCACTGTCGTCCAGTGCCATGCAGTTTG...TCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | TTTAATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAACCCGGGTGTTGCCACTaGGTGGGCAGGCAGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FNRLGEWATELATLEALEPGCCH*VGRQRD Trigger: GTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGG...TTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGACCAATCACTGCTGCTTaGCAGGGTGCCTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GASSQFPCGSSSGRGRSGPITAA*QGASSQ Trigger: CTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGG...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGAAGTATGAGGTGGATGTaGGGTGGATGTGCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GASSQFPCGSSSGRGRSGSMRWM*GGCASV Trigger: CACAGAGGCACATCCACCTCACATCCACCTCATACT...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGACACTGCCAACAGGGCTaGACCACACAGAAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: GASSQFPCGSSSGRGRSGHCQQG*TTQKDE Trigger: CTCATCTTTCTGTGTGGTGCAGCCCTGTTGGCAGTG...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAAGCAACGTCAGGAAGTaGTCAGCCATTGTGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: AACQGASSQFPCGSSSGRSNVRK*SAIVVY Trigger: GTACACCACAATGGCTGAGCACTTCCTGACGTTGCT...TCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | CCAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGAGGTGGATGTGAGGTaGATGTGCCTCTGTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSDIVRSCPLPQSLLLAREVDVR*MCLCVP Trigger: AGGCACACAGAGGCACATCCACCTCACATCCACCTC...CCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGAAGTGCTCAGCCATTGTaGTGTACACCAAGGCGACCA | + |
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Preference number: 4 (lower is better) Translates to: GASSQFPCGSSSGRGRSGSAQPL*CTPRRP Trigger: TGGTCGCCTTGGTGTACACCACAATGGCTGAGCACT...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| 3UTR CAA 72 bp | AGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATaGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRKGRSILAQVT*LDPVPSPNHCC Trigger: GCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | ACTAGGCCTAGGGGGCATATCAAGGGTTTAATAGACTGGGGGAATGGGCAACAGGCCTCTGTGTGCCTGTaGTGGTCAGCGTGTAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TRPRGHIKGLIDWGNGQQASVCL*WSACRC Trigger: ACACCTACACGCTGACCATCACAGGCACACAGAGGC...CTGTTGCCCATTCCCCCAGTCTATTAAACCCTTGATATGCCCCCTAGGCCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | GCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGAGAGTACACAAGTATaGGGTGGATGTGAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AACQGASSQFPCGSSSGRESTQV*GGCEVD Trigger: ATCCACCTCACATCCACCTCATACTTGTGTACTCTC...TCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCCTTACACTCCTAACTaGACAGGGAGAAGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: DIVRSCPLPQSLLLARVPPYTPN*TGRRVS Trigger: AGAGACCCTTCTCCCTGTGCAGTTAGGAGTGTAAGG...AGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCATGAAGCTGAAGCACTaGATGGTGGCTCCTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VTLLDPVPSPNHCCLPGCMKLKH*MVAPVQ Trigger: CTGAACAGGAGCCACCATGCAGTGCTTCAGCTTCAT...GCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | TATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACCCCACGTTGACAAACTaGATGGCACTGGACGACAGT | + |
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Preference number: 4 (lower is better) Translates to: YLAPSLEQKGQVHSGPSDPTLTN*MALDDS Trigger: ACTGTCGTCCAGTGCCATGCAGTTTGTCAACGTGGG...GTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | ACTAGGCCTAGGGGGCATATCAAGGGTTTAATAGACTGGGGGAATGGGCAACAGTCCCCCAATCACTGCTaGTTGCCAGGGTGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TRPRGHIKGLIDWGNGQQSPNHC*LPGCLF Trigger: GAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGA...CTGTTGCCCATTCCCCCAGTCTATTAAACCCTTGATATGCCCCCTAGGCCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | CTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGGCAGAGGCAGAAGTaGACTTATTGTAGATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPPPITAACQGASSQFPWQRQK*TYCRLQ Trigger: CTGCAATCTACAATAAGTCCACTTCTGCCTCTGCCA...TGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | CAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGGTGGTGTTCCACACTTaGGTGAAGTCTTCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QVTLLDPVPSPNHCCLPGVVFHT*VKSSWE Trigger: TTCCCAGGAAGACTTCACTCAAGTGTGGAACACCAC...CCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | TCCCCCAGTAGAGCACTGGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTTCTACTTTTTGGTCGTaGGCCTTTTGCTTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPSRALGSPLGLGGISRVSTFWS*AFCLVQ Trigger: CTGCACCAAGCAAAAGGCTCACGACCAAAAAGTAGA...AACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCCAGTGCTCTACTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | TTTAATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAACACCCAGATGCCCACTaGCAACAGGGCTGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: FNRLGEWATELATLEALEHPDAH*QQGCTT Trigger: TGTGGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTG...TTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | GTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCGATAGGATGAAAGACTaGACCCTGAGAGTACACAAG | + |
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Preference number: 4 (lower is better) Translates to: VTLLDPVPSPNHCCLPGCDRMKD*TLRVHK Trigger: CTTGTGTACTCTCAGGGTTCAGTCTTTCATCCTATC...GCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | CCAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGCATTGGCTGTGTTGGTaGCGTTGTCATTGCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: PSDIVRSCPLPQSLLLARHWLCW*RCHCNR Trigger: TCTGTTGCAATGACAACGTCACCAACACAGCCAATG...CCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | TATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACGTCATTGCAACAGAATaGGGGAAAGGCACTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLAPSLEQKGQVHSGPSDVIATE*GKGTVL Trigger: GAGAACAGTGCCTTTCCCCCATTCTGTTGCAATGAC...GTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | AGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATTGTTAGATCCCCATCCACCCACCAATaGAAGGAAAGTCAGGCATCG | + |
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Preference number: 4 (lower is better) Translates to: SLEQKGQVHSGPSDIVRSPSTHQ*KESQAS Trigger: CGATGCCTGACTTTCCTTCCATTGGTGGGTGGATGG...GGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | TCCCCCAGTAGAGCACTGGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTCTCTTTGAAGTAGGGTaGGTCCTCAAAATCCGTATA | + |
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Preference number: 4 (lower is better) Translates to: SPSRALGSPLGLGGISRVLFEVG*VLKIRI Trigger: TATACGGATTTTGAGGACTCACCCTACTTCAAAGAG...AACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCCAGTGCTCTACTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | GTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCAGGTTTATGCATTTTaGAGTGCCTTCTACACATCC | + |
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Preference number: 4 (lower is better) Translates to: VTLLDPVPSPNHCCLPGCQVYAF*SAFYTS Trigger: GGATGTGTAGAAGGCACTTCAAAATGCATAAACCTG...GCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | TGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTGACCACAACGCCGGCTaGGATGAGGAAGTAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CNRFMHFEVPSTHPPRGSDHNAG*DEEVAH Trigger: GTGGGCTACTTCCTCATCGCAGCCGGCGTTGTGGTC...AGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR TCA 90 bp | GCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGACATACAAAAGCTGATTaGAGCAACCCTCTACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: AACQGASSQFPCGSSSGRHTKAD*SNPLLF Trigger: AAAAAGTAGAGGGTTGCTTCAATCAGCTTTTGTATG...TCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR GCA 90 bp | GGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTTAATAGACTGGGGGAATACCACCCACGGTGACTaGATTAGTTCGGATGTCATA | + |
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Preference number: 4 (lower is better) Translates to: GITTRPRGHIKGLIDWGNTTHGD*ISSDVI Trigger: TATGACATCCGAACTAATGCAGTCACCGTGGGTGGT...ATTCCCCCAGTCTATTAAACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CCA 90 bp | AATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAATGCCATCTTGGAAGGTATTaGGAGGCACAGATCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRLGEWATELATLEALECHLGRY*EAQIRE Trigger: CTCTCTGATCTGTGCCTCCCAATACCTTCCAAGATG...GCATTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR TCA 90 bp | TATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATGTCATACAAAAGCTaGTTGAAGCAACCCTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: YLAPSLEQKGQVHSGPSDMSYKS*LKQPST Trigger: AGTAGAGGGTTGCTTCAATCAGCTTTTGTATGACAT...GTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CCA 90 bp | ACTAGGCCTAGGGGGCATATCAAGGGTTTAATAGACTGGGGGAATGGGCAACAGAAGGGTTTAATAGACTaGGGGAATGGGCAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPRGHIKGLIDWGNGQQKGLID*GNGQQN Trigger: GTTCTGTTGCCCATTCCCCCAGTCTATTAAACCCTT...CTGTTGCCCATTCCCCCAGTCTATTAAACCCTTGATATGCCCCCTAGGCCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGGACTTATTGTAGATTaGAGTACAGATACATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSDIVRSCPLPQSLLLARGLIVD*STDTWT Trigger: TGTCCATGTATCTGTACTGCAATCTACAATAAGTCC...CCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CCA 90 bp | CAACATTGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAACATGGACACAATCATaGCAGCCAGCTCGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHCNRFMHFEVPSTHPPRTWTQS*QPARGP Trigger: GGGGCCTCGAGCTGGCTGCCATGATTGTGTCCATGT...TCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACAATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR TCA 90 bp | AACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTGCTTGTTCCACACTTGAGTaGAGTCTTCCTGGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRFMHFEVPSTHPPRGSACSTLE*SLPGNH Trigger: ATGGTTCCCAGGAAGACTTCACTCAAGTGTGGAACA...AGCAGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR TCA 90 bp | CAACATTGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAACCCAGAGGCTCTGCTaGTTTCACTTATGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHCNRFMHFEVPSTHPPRTQRLC*FHLCPG Trigger: GCCTGGGCATAAGTGAAATCAGCAGAGCCTCTGGGT...TCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACAATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CCA 90 bp | CAACATTGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCACTGGACGACAGTaGCCCGAAGATCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHCNRFMHFEVPSTHPPRGTGRQ*PEDLQK Trigger: TTTCTGAAGATCTTCGGGCCACTGTCGTCCAGTGCC...TCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR TCA 90 bp | TGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTAACCATAATCTTTCTTaGTGGCAGGCACTACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNRFMHFEVPSTHPPRGSNHNLS*WQALPA Trigger: TGCTGGTAGTGCCTGCCATCAAGAAAGATTATGGTT...AGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTGCTAACATAGACCATCTTTaGTCTCAGCTCTTGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRFMHFEVPSTHPPRGSANIDHL*SQLLIC Trigger: GCAGATCAAGAGCTGAGACCAAAGATGGTCTATGTT...AGCAGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CCA 90 bp | CAACATTGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGATGCAGTACAGATACATaGACACAATCATGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHCNRFMHFEVPSTHPPRCSTDT*TQSWQP Trigger: TGGCTGCCATGATTGTGTCCATGTATCTGTACTGCA...TCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACAATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS CCA 90 bp | GAGGCTCCACAAAGGACAAAACAGCTCCCGGGTGTTGCCACTGAGTaGGCAGGCAGAGGGACGCCTGGCTCTCACACACCACTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: EAPQRTKQLPGVATE*AGRGTPGSHTPLLT Trigger: GGTGAGCAGTGGTGTGTGAGAGCCAGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTTTTGTCCTTTGTGGAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469330.5 |
||
| CDS CCA 90 bp | GGGTTTGGGAATCCCAGGGCCTGGTGTCAAGGGCGAGGGGACTCTTaGTCATCAGCCTGTGGAGCTGGGTTTCACACACCGTCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFGNPRAWCQGRGDS*SSACGAGFHTPSRG Trigger: CCCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACACCAGGCCCTGGGATTCCCAAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
||
| CDS CCA 90 bp | GAGGCTCCACAAAGGACAAAACAGCTCCCGGGTGTTGCCACTGAGTaGGCAGGCAGAGGGACGCCTGGCTCTCACACACCACTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: EAPQRTKQLPGVATE*AGRGTPGSHTPLLT Trigger: TGTGAGCAGTGGTGTGTGAGAGCCAGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTTTTGTCCTTTGTGGAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372003.6 ENST00000498443.5 |
||
| CDS CCA 90 bp | CAGGGCCTGGTGTCAAGGGCGAGGGGACTCTTGGTCATCAGCCTGTaGAGCTGGGTTTCACACACCGTCACGAGGGCACACTTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGLVSRARGLLVISL*SWVSHTVTRAHLLS Trigger: TGAGAGCAAGTGTGCCCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACACCAGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
||
| CDS-3UTR CAA 90 bp | CCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTAACAGCTCCCGGGTGTaGCCACTGAGTGGGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PYLAPSLEQKGQVHSGPSNSSRV*PLSGQA Trigger: TGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTT...ACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS GCA 90 bp | GCCCGAAGATCTTCAGAAAGGATGCCCCATCGATTGACACCCAGATaGCCACTGCCAACAGGGCTGCACCACACAGCTGAGGCCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ARRSSERMPHRLTPR*PLPTGLHHTAEAPF Trigger: AAATGGGGCCTCAGCTGTGTGGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGATCTTCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464786.5 ENST00000482143.5 |
||
| CDS CCA 90 bp | CTGGTGTCAAGGGCGAGGGGACTCTTGGTCATCAGCCTGTGGAGCTaGGTTTCACACACCGTCACGAGGGCACACTTGCTCTCAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVSRARGLLVISLWS*VSHTVTRAHLLSVL Trigger: TAAGACTGAGAGCAAGTGTGCCCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
||
| CDS TCA 90 bp | GGACGACAGTGGCCCGAAGATCTTCAGAAAGGATGCCCCATCGATTaGCACCCAGATGCCCACTGCCAACAGGGCTGCACCACACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRQWPEDLQKGCPID*HPDAHCQQGCTTQK Trigger: TTTCTGTGTGGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGATCTTCGGGCCACTGTCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000475163.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS-3UTR CAA 90 bp | TGGTCCCTATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCGAAGTAGGGGCTCTCTaGCCTTACACTCCTAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLSSPKSGAERAGPFWPEVGAL*PYTPNC Trigger: GCAGTTAGGAGTGTAAGGCAAGAGAGCCCCTACTTC...GGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATAGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATCCTGTTCAGGGCTCTaGGCAGTGAGTTCTGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPITAACQGASSQFPSCSGL*AVSSER Trigger: TCTTTCAGAACTCACTGCCAAGAGCCCTGAACAGGA...TGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAGTAGAGCACTGGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTGGTGGTGTTCCACACTaGAGTGAAGTCTTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPSRALGSPLGLGGISRVGGVPH*SEVFLG Trigger: TCCCAGGAAGACTTCACTCAAGTGTGGAACACCACC...AACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCCAGTGCTCTACTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | CCAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGCTGGCCCAAGTGACATaGTTAGATCCTGTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSDIVRSCPLPQSLLLARLAQVT*LDPVPS Trigger: GGAGGGGACAGGATCTAACAATGTCACTTGGGCCAG...CCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS TCA 90 bp | AGCACTGCATGGTGGCTCCTGTTCAGGGCTCTTGGCAGTGAGTTCTaGAAGAGGGAACTGCTGAGGCTCCACAAAGGACAAAACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STAWWLLFRALGSEF*KRELLRLHKGQNSS Trigger: GGAGCTGTTTTGTCCTTTGTGGAGCCTCAGCAGTTCCCTCTTTCAGAACTCACTGCCAAGAGCCCTGAACAGGAGCCACCATGCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
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| CDS GCA 90 bp | CAGCTCGAGGCCCCCAATTCCAGCTGCCACACCACCCACGGTGACTaGATTAGTTCGGATGTCATACAAAAGCTGATTGAAGCAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLEAPNSSCHTTHGD*ISSDVIQKLIEATL Trigger: GAGGGTTGCTTCAATCAGCTTTTGTATGACATCCGAACTAATGCAGTCACCGTGGGTGGTGTGGCAGCTGGAATTGGGGGCCTCGAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000470318.1 ENST00000475163.5 |
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| CDS-3UTR CAA 90 bp | CTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCACAACATAGACCATCTTaGGTCTCAGCTCTTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPITAACQGASSQFPQHRPS*VSALDL Trigger: CAGATCAAGAGCTGAGACCAAAGATGGTCTATGTTG...TGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | AGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATTGTTAGATCCTGTCCCCGTCACGAGGGCACACTaGCTCTCAGTCTTAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKGRSILAQVTLLDPVPVTRAH*LSVLAP Trigger: TGGTGCTAAGACTGAGAGCAAGTGTGCCCTCGTGAC...GGGGACAGGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | TCCCCCAGTAGAGCACTGGGATCACCACTAGGCCTAGGGGGCATATCAAGGGTTTTGGTGCAGGTTTCATaGGCTGTGTTGGTGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSRALGSPLGLGGISRVLVQVS*AVLVTL Trigger: CAACGTCACCAACACAGCCAATGAAACCTGCACCAA...AACCCTTGATATGCCCCCTAGGCCTAGTGGTGATCCCAGTGCTCTACTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | AGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACATTGTTAGATCCCCCAATCACTGCTGCTaGCCAGGGTGCCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQKGQVHSGPSDIVRSPNHCC*PGCLFT Trigger: TGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTGGG...GGATCTAACAATGTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | TATCTAGCCCCAAGTCTGGAGCAGAAAGGGCAGGTCCATTCTGGCCCAAGTGACGCTGTGTTGGTGACGTaGTCATTGCAACAGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLAPSLEQKGQVHSGPSDAVLVT*SLQQNG Trigger: CCCATTCTGTTGCAATGACAACGTCACCAACACAGC...GTCACTTGGGCCAGAATGGACCTGCCCTTTCTGCTCCAGACTTGGGGCTAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS-3UTR CAA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGATTGGTCGTGAGCCTTTaGCTTGGTGCAGGTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GASSQFPCGSSSGRGRSGLVVSL*LGAGFI Trigger: AATGAAACCTGCACCAAGCAAAAGGCTCACGACCAA...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | GACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGTGCCTGCAACCCTCTACTTTTaGGTCGTGAGCCTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DIVRSCPLPQSLLLARVPATLYF*VVSLLL Trigger: AAGCAAAAGGCTCACGACCAAAAAGTAGAGGGTTGC...AGGCACCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000372003.6 |
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| CDS CCA 90 bp | GGCAGAGGCAGAAGTGGACTTATTGTAGATTGCAGTACAGATACATaGACACAATCATGGCAGCCAGCTCGAGGCCCCCAATTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGRSGLIVDCSTDT*TQSWQPARGPQFQL Trigger: CAGCTGGAATTGGGGGCCTCGAGCTGGCTGCCATGATTGTGTCCATGTATCTGTACTGCAATCTACAATAAGTCCACTTCTGCCTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000470318.1 ENST00000475163.5 |
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| CDS-3UTR CAA 90 bp | CAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTATTGGTGACGTTGTCATaGCAACAGAATGGGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSLLLARVPLHSSHVAAVLVTLS*QQNGGK Trigger: CTTTCCCCCATTCTGTTGCAATGACAACGTCACCAA...TACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGAGTTTCATTGGCTGTGTaGGTGACGTTGTCATTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GASSQFPCGSSSGRGRSGVSLAV*VTLSLQ Trigger: TTGCAATGACAACGTCACCAACACAGCCAATGAAAC...TCCACTTCTGCCTCTGCCACTACTGCTGCCACATGGGAACTGTGAAGAGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS GCA 90 bp | GATCTGCCCCATGAAGTAGGGGCTCTCTTGCCTTACACTCCTAACTaGACAGGGAGAAGGGTCTCTGTAAACATCTTGGAAGGTATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPHEVGALLPYTPN*TGRRVSVNILEGIG Trigger: CCCAATACCTTCCAAGATGTTTACAGAGACCCTTCTCCCTGTGCAGTTAGGAGTGTAAGGCAAGAGAGCCCCTACTTCATGGGGCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS GCA 90 bp | TGTGGCAGCAGTAGTGGCAGAGGCAGAAGTGGACTTATTGTAGATTaGAGTACAGATACATGGACACAATCATGGCAGCCAGCTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGSSSGRGRSGLIVD*STDTWTQSWQPARG Trigger: GCCTCGAGCTGGCTGCCATGATTGTGTCCATGTATCTGTACTGCAATCTACAATAAGTCCACTTCTGCCTCTGCCACTACTGCTGCCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000470318.1 ENST00000475163.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAATGCACATCTTGGAAGGTATaGGGAGGCACAGATCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRLGEWATELATLEALECTSWKV*GGTDQR Trigger: TCTCTGATCTGTGCCTCCCAATACCTTCCAAGATGT...GCATTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | TGTAACAGGTTTATGCATTTTGAAGTGCCTTCTACACATCCACCCAGAGGCTCTAGGATGCCCCATCGATaGACACCCAGATGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CNRFMHFEVPSTHPPRGSRMPHR*TPRCPL Trigger: CAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCT...AGAGCCTCTGGGTGGATGTGTAGAAGGCACTTCAAAATGCATAAACCTGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACATTGTTAGATCCTGTCCCCTCCCCCAATCACTGCTGCTTGCCAGGGAGAAAGATGAGCAAATaGAAGAGGATCATCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVTLLDPVPSPNHCCLPGRKMSK*KRIIMV Trigger: GACCATGATGATCCTCTTCAATTTGCTCATCTTTCT...CCCTGGCAAGCAGCAGTGATTGGGGGAGGGGACAGGATCTAACAATGTCACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS-3UTR CAA 90 bp | CAATCACTGCTGCTTGCCAGGGTGCCTCTTCACAGTTCCCATGTGGCAGCAGTAACAGGTTTATGCATTTaGAAGTGCCTTCTACACATC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLLARVPLHSSHVAAVTGLCI*KCLLHI Trigger: GATGTGTAGAAGGCACTTCAAAATGCATAAACCTGT...TACTGCTGCCACATGGGAACTGTGAAGAGGCACCCTGGCAAGCAGCAGTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS TCA 90 bp | ATTGCAACAGAATGGGGGAAAGGCACTGTTCTCTTTGAAGTAGGGTaGGTCCTCAAAATCCGTATAGTTGGTGAAGCCACAGCACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IATEWGKGTVLFEVG*VLKIRIVGEATALE Trigger: CTCAAGTGCTGTGGCTTCACCAACTATACGGATTTTGAGGACTCACCCTACTTCAAAGAGAACAGTGCCTTTCCCCCATTCTGTTGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000470318.1 ENST00000475163.5 ENST00000498443.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACTGGGGGAATGGGCAACAGAACTGGCTACCTTAGAGGCTCTGGAATGCTGGACTTATTGTAGATaGCAGTACAGATACATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NRLGEWATELATLEALECWTYCR*QYRYMD Trigger: GTCCATGTATCTGTACTGCAATCTACAATAAGTCCA...GCATTCCAGAGCCTCTAAGGTAGCCAGTTCTGTTGCCCATTCCCCCAGTCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372003.6 |
||
| CDS CAA 72 bp | CTGAGGCTCCACAAAGGACAAAACAGCTCCCGGGTGTaGCCACTGAGTGGGCAGGCAGAGGGACGCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRLHKGQNSSRV*PLSGQAEGRLA Trigger: AGCCAGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTTTTGTCCTTTGTGGAGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
||
| CDS CAA 90 bp | AGGGAACTGCTGAGGCTCCACAAAGGACAAAACAGCTCCCGGGTGTaGCCACTGAGTGGGCAGGCAGAGGGACGCCTGGCTCTCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: RELLRLHKGQNSSRV*PLSGQAEGRLALTH Trigger: GTGTGTGAGAGCCAGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTTTTGTCCTTTGTGGAGCCTCAGCAGTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
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| CDS CAA 90 bp | AGGGTTTGGGAATCCCAGGGCCTGGTGTCAAGGGCGAGGGGACTCTaGGTCATCAGCCTGTGGAGCTGGGTTTCACACACCGTCACGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVWESQGLVSRARGL*VISLWSWVSHTVTR Trigger: CCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACACCAGGCCCTGGGATTCCCAAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
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| CDS CCA 72 bp | CAAAGGACAAAACAGCTCCCGGGTGTTGCCACTGAGTaGGCAGGCAGAGGGACGCCTGGCTCTCACACACCA | + |
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Preference number: 6 (lower is better) Translates to: QRTKQLPGVATE*AGRGTPGSHTP Trigger: TGGTGTGTGAGAGCCAGGCGTCCCTCTGCCTGCCCACTCAGTGGCAACACCCGGGAGCTGTTTTGTCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
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| CDS CCA 72 bp | AGGGCGAGGGGACTCTTGGTCATCAGCCTGTGGAGCTaGGTTTCACACACCGTCACGAGGGCACACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RARGLLVISLWS*VSHTVTRAHLL Trigger: GAGCAAGTGTGCCCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
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| CDS CCA 72 bp | GTGTCAAGGGCGAGGGGACTCTTGGTCATCAGCCTGTaGAGCTGGGTTTCACACACCGTCACGAGGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: VSRARGLLVISL*SWVSHTVTRAH Trigger: GTGTGCCCTCGTGACGGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
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| CDS CAA 72 bp | GAATCCCAGGGCCTGGTGTCAAGGGCGAGGGGACTCTaGGTCATCAGCCTGTGGAGCTGGGTTTCACACACC | + |
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Preference number: 6 (lower is better) Translates to: ESQGLVSRARGL*VISLWSWVSHT Trigger: GGTGTGTGAAACCCAGCTCCACAGGCTGATGACCAAGAGTCCCCTCGCCCTTGACACCAGGCCCTGGGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482143.5 ENST00000482928.5 |
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| CDS TCA 72 bp | TGGCCCGAAGATCTTCAGAAAGGATGCCCCATCGATTaGCACCCAGATGCCCACTGCCAACAGGGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: WPEDLQKGCPID*HPDAHCQQGCT Trigger: GGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGATCTTCGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000469330.5 ENST00000472170.1 ENST00000475163.5 ENST00000482143.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS CAA 72 bp | GTGGCCCGAAGATCTTCAGAAAGGATGCCCCATCGATaGACACCCAGATGCCCACTGCCAACAGGGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VARRSSERMPHR*TPRCPLPTGLH Trigger: GTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGATCTTCGGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000469330.5 ENST00000472170.1 ENST00000475163.5 ENST00000482143.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS CAA 90 bp | TGGACGACAGTGGCCCGAAGATCTTCAGAAAGGATGCCCCATCGATaGACACCCAGATGCCCACTGCCAACAGGGCTGCACCACACAGAA | + |
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Preference number: 6 (lower is better) Translates to: WTTVARRSSERMPHR*TPRCPLPTGLHHTE Trigger: TTCTGTGTGGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGATCTTCGGGCCACTGTCGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000475163.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS TCA 72 bp | CACTGCATGGTGGCTCCTGTTCAGGGCTCTTGGCAGTaGGTTCTGAAAGAGGGAACTGCTGAGGCTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: HCMVAPVQGSWQ*VLKEGTAEAPQ Trigger: TTGTGGAGCCTCAGCAGTTCCCTCTTTCAGAACTCACTGCCAAGAGCCCTGAACAGGAGCCACCATGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
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| CDS CCA 72 bp | GCCCACGTTGACAAACTGCATGGCACTGGACGACAGTaGCCCGAAGATCTTCAGAAAGGATGCCCCATCGAT | + |
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Preference number: 6 (lower is better) Translates to: AHVDKLHGTGRQ*PEDLQKGCPID Trigger: ATCGATGGGGCATCCTTTCTGAAGATCTTCGGGCCACTGTCGTCCAGTGCCATGCAGTTTGTCAACGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000469330.5 ENST00000472170.1 ENST00000475163.5 ENST00000482143.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS CAA 90 bp | CCAGAATCCAACTTCAGGCCCGCCCCTCATGTAGACAAGACCTCCTaGCCTCACAAGAGGAAAGTGAGGTACCAGTGGGAATACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PESNFRPAPHVDKTS*PHKRKVRYQWEYSQ Trigger: CTGGCTGTATTCCCACTGGTACCTCACTTTCCTCTTGTGAGGCAAGGAGGTCTTGTCTACATGAGGGGCGGGCCTGAAGTTGGATTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464786.5 ENST00000482143.5 |
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| CDS TCA 72 bp | TGGTGGCTCCTGTTCAGGGCTCTTGGCAGTGAGTTCTaGAAGAGGGAACTGCTGAGGCTCCACAAAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: WWLLFRALGSEF*KRELLRLHKGQ Trigger: TTGTCCTTTGTGGAGCCTCAGCAGTTCCCTCTTTCAGAACTCACTGCCAAGAGCCCTGAACAGGAGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000498443.5 |
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| CDS GCA 72 bp | TCTTCAGAAAGGATGCCCCATCGATTGACACCCAGATaGCCACTGCCAACAGGGCTGCACCACACAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSERMPHRLTPR*PLPTGLHHTER Trigger: TCTTTCTGTGTGGTGCAGCCCTGTTGGCAGTGGGCATCTGGGTGTCAATCGATGGGGCATCCTTTCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000475163.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS CAA 72 bp | TCAGCTCTTGATCTGCCCCATGAAGTAGGGGCTCTCTaGCCTTACACTCCTAACTGCACAGGGAGAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SALDLPHEVGAL*PYTPNCTGRRV Trigger: GACCCTTCTCCCTGTGCAGTTAGGAGTGTAAGGCAAGAGAGCCCCTACTTCATGGGGCAGATCAAGAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS CAA 72 bp | AACTTCAGGCCCGCCCCTCATGTAGACAAGACCTCCTaGCCTCACAAGAGGAAAGTGAGGTACCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: NFRPAPHVDKTS*PHKRKVRYQWE Trigger: TTCCCACTGGTACCTCACTTTCCTCTTGTGAGGCAAGGAGGTCTTGTCTACATGAGGGGCGGGCCTGAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464786.5 ENST00000482143.5 |
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| CDS CAA 90 bp | TCTTTGGTCTCAGCTCTTGATCTGCCCCATGAAGTAGGGGCTCTCTaGCCTTACACTCCTAACTGCACAGGGAGAAGGGTCTCTGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: SLVSALDLPHEVGAL*PYTPNCTGRRVSVN Trigger: GTTTACAGAGACCCTTCTCCCTGTGCAGTTAGGAGTGTAAGGCAAGAGAGCCCCTACTTCATGGGGCAGATCAAGAGCTGAGACCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS GCA 72 bp | GCCCCCAATTCCAGCTGCCACACCACCCACGGTGACTaGATTAGTTCGGATGTCATACAAAAGCTGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: APNSSCHTTHGD*ISSDVIQKLIE Trigger: TTCAATCAGCTTTTGTATGACATCCGAACTAATGCAGTCACCGTGGGTGGTGTGGCAGCTGGAATTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000470318.1 ENST00000475163.5 |
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| CDS GCA 72 bp | AAGAGGATCATCATGGTCTTAATGAAGCTGAAGCACTaGATGGTGGCTCAGGGAAAGGCTTCAGTGACCGCA | + |
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Preference number: 6 (lower is better) Translates to: KRIIMVLMKLKH*MVAQGKASVTA Trigger: TGCGGTCACTGAAGCCTTTCCCTGAGCCACCATGCAGTGCTTCAGCTTCATTAAGACCATGATGATCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475163.5 ENST00000482928.5 |
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| CDS GCA 72 bp | CATGAAGTAGGGGCTCTCTTGCCTTACACTCCTAACTaGACAGGGAGAAGGGTCTCTGTAAACATCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HEVGALLPYTPN*TGRRVSVNILE Trigger: TTCCAAGATGTTTACAGAGACCCTTCTCCCTGTGCAGTTAGGAGTGTAAGGCAAGAGAGCCCCTACTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000482928.5 ENST00000498443.5 |
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| CDS TCA 72 bp | GAATGGGGGAAAGGCACTGTTCTCTTTGAAGTAGGGTaGGTCCTCAAAATCCGTATAGTTGGTGAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: EWGKGTVLFEVG*VLKIRIVGEAT Trigger: TGTGGCTTCACCAACTATACGGATTTTGAGGACTCACCCTACTTCAAAGAGAACAGTGCCTTTCCCCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000464786.5 ENST00000470318.1 ENST00000475163.5 ENST00000498443.5 |
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| CDS GCA 72 bp | AGTAGTGGCAGAGGCAGAAGTGGACTTATTGTAGATTaGAGTACAGATACATGGACACAATCATGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSGRGRSGLIVD*STDTWTQSWQP Trigger: TGGCTGCCATGATTGTGTCCATGTATCTGTACTGCAATCTACAATAAGTCCACTTCTGCCTCTGCCACTACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372003.6 ENST00000470318.1 ENST00000475163.5 |
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| CDS CAA 72 bp | GCCAACAGGGCTGCACCACACAGAAAGATGAGCAAATaGAAGAGGATCATCATGGTCTTAATGAAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ANRAAPHRKMSK*KRIIMVLMKLK Trigger: CTTCAGCTTCATTAAGACCATGATGATCCTCTTCAATTTGCTCATCTTTCTGTGTGGTGCAGCCCTGTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000372003.6 ENST00000469330.5 ENST00000475163.5 ENST00000482928.5 ENST00000498443.5 |
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