RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSNAXIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102904

Ensembl transcript IDs: ENST00000388833.7, ENST00000415766.7, ENST00000431934.2, ENST00000466164.5, ENST00000487120.5, ENST00000561639.6, ENST00000561654.5, ENST00000562321.1, ENST00000562633.5, ENST00000563363.5, ENST00000565148.5, ENST00000565339.5, ENST00000565558.1, ENST00000567852.5, ENST00000568990.5, ENST00000569504.5

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGGGAGAGGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACCTaGGGCCCTGCCGGCTGCCCTCACCTTTGCACTTGGTCCAGTCAG +
Preference number: 1 (lower is better)
Translates to: VGRGSWSLGPHVSRT*GPAGCPHLCTWSSQ
Trigger: CTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CCA 90 bp CGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCTaGTCGCTGTTCTTGCCCTCAGCCAGCATCTGCCAGCGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: RSSPEPISSRSTSTS*SLFLPSASICQRSG
Trigger: CCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp AGCACGTCCACCAGCTGGTCGCTGTTCTTGCCCTCAGCCAGCATCTaGCAGCGCTCTGGGCCCCCAGCCACCACATCTTTGCACTTGGTC +
Preference number: 1 (lower is better)
Translates to: STSTSWSLFLPSASI*QRSGPPATTSLHLV
Trigger: GACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR GCA 90 bp AACCAATCTCTTCCAGGAGCACGTCCACCAGCTGGTCGCTGTTCTTaGCCTCAGCCAGCATCTGCCAGCGCTCTGGGCCCCCAGCCACCA +
Preference number: 1 (lower is better)
Translates to: NQSLPGARPPAGRCS*PQPASASALGPQPP
Trigger: TGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp GCCGGCTGCCCTCACCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATTGGTCCC +
Preference number: 1 (lower is better)
Translates to: AGCPHLCTWSSQAAA*KCAGSPAAQRRIGP
Trigger: GGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR TCA 90 bp GCAGGCTCTGGCTCTCGAGGTCCCACACGCCTGATGTCAATCACCTaGAGCCGCTCCAGGGCAGTCTGGAGGATTTCCACCACGGCTTCT +
Preference number: 1 (lower is better)
Translates to: AGSGSRGPTRLMSIT*SRSRAVWRISTTAS
Trigger: AGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp CCCCAGCCACCACATCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATTGGTCCC +
Preference number: 1 (lower is better)
Translates to: PQPPHLCTWSSQAAA*KCAGSPAAQRRIGP
Trigger: GGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR CCA 90 bp GGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTaGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCA +
Preference number: 1 (lower is better)
Translates to: GRPGSCRCSLSACPG*GRWSSGPLAAWAES
Trigger: TGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp CACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTaGAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATG +
Preference number: 1 (lower is better)
Translates to: HLVQSGRGVEVRWIS*SSEKNWSRSFSVLM
Trigger: CATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp TGCCCTCACCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCTCAGAGAAGAATTGGTCCCGTTCCT +
Preference number: 1 (lower is better)
Translates to: CPHLCTWSSQAAAWK*AGSPAAQRRIGPVP
Trigger: AGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CCA 90 bp GACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTCTaGCTCTCGAGGTCCCACACGCCTGATGTCAATCACCTGAAGCCG +
Preference number: 1 (lower is better)
Translates to: DWSTQAAHKFLACRL*LSRSHTPDVNHLKP
Trigger: CGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp CCACCACATCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCTCAGAGAAGAATTGGTCCCGTTCCT +
Preference number: 1 (lower is better)
Translates to: PPHLCTWSSQAAAWK*AGSPAAQRRIGPVP
Trigger: AGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR CCA 90 bp CGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCATGAGGATC +
Preference number: 1 (lower is better)
Translates to: RGVEVRWISCSSEKN*SRSFSVLMCSCMRI
Trigger: GATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp GGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATaGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCAT +
Preference number: 1 (lower is better)
Translates to: GSCRCSLSACPGWGR*SSGPLAAWAESLPH
Trigger: ATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp TCACCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGC +
Preference number: 1 (lower is better)
Translates to: SPLHLVQSGRGVEVR*ISCSSEKNWSRSFS
Trigger: GCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR TCA 90 bp CAAGTTCCTAGCTTGCAGGCTCTGGCTCTCGAGGTCCCACACGCCTaGTGTCAATCACCTGAAGCCGCTCCAGGGCAGTCTGGAGGATTT +
Preference number: 1 (lower is better)
Translates to: QVPSLQALALEVPHA*CQSPEAAPGQSGGF
Trigger: AAATCCTCCAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp ACATCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGC +
Preference number: 1 (lower is better)
Translates to: TSLHLVQSGRGVEVR*ISCSSEKNWSRSFS
Trigger: GCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR CCA 90 bp CTGGAGGATTTCCACCACGGCTTCTTCCTTCTCGTCACCCTCCTCTaGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGT +
Preference number: 1 (lower is better)
Translates to: LEDFHHGFFLLVTLL*HFRLRELEGLAHVG
Trigger: ACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp ACAGAGCCTCAAGGGAATGCTGATGCCTCTTCCCTCACCAGGTGCTaGTCTGGGTGTTTCCTGTTCTGGGAGTGGGTGGAGGAGAGACTT +
Preference number: 1 (lower is better)
Translates to: TEPQGNADASSLTRC*SGCFLFWEWVEERL
Trigger: AAGTCTCTCCTCCACCCACTCCCAGAACAGGAAACACCCAGAGCAGCACCTGGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR TCA 90 bp AGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCTGGCTCTCA +
Preference number: 1 (lower is better)
Translates to: RRIGPVPSACSCAAA*GSHAPCEPPRSWLS
Trigger: TGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp TTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTaGCGGGTCATCTTAAGAGCCAGGGTTAACTTCACAGGGTCCTCC +
Preference number: 1 (lower is better)
Translates to: LAFMLLSSICVRVRS*RVILRARVNFTGSS
Trigger: GGAGGACCCTGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp GGGACCACATCTCCAAAGTTGGCCTTCATGTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGCCGGGTCATCTTAAGAGCCAGGGTT +
Preference number: 1 (lower is better)
Translates to: GTTSPKLAFMLLSSI*VRVRSCRVILRARV
Trigger: AACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGATGTGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp GTGGAGGAGAGACTTGGGGAGGGAGGTGCTGCCTGGGATGGAATCTaGCCATACTACTTCCTACCAGTTTTAGCCTCACAGCATCTGTTC +
Preference number: 1 (lower is better)
Translates to: VEERLGEGGAAWDGI*PYYFLPVLASQHLF
Trigger: GAACAGATGCTGTGAGGCTAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTCCCCAAGTCTCTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR GCA 90 bp CACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTCTTaGCGGTTGCTGACAGAGCCTCAAGGGAATGCTGATGCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: HRRRSNPWFSSFTFS*RLLTEPQGNADASS
Trigger: GGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGAGAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR TCA 90 bp TTTTACATTCTCTTGCCGGTTGCTGACAGAGCCTCAAGGGAATGCTaGTGCCTCTTCCCTCACCAGGTGCTGCTCTGGGTGTTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: FYILLPVADRASREC*CLFPHQVLLWVFPV
Trigger: AACAGGAAACACCCAGAGCAGCACCTGGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGAGAATGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CCA 90 bp TTCCTTCCAGGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTaGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGG +
Preference number: 1 (lower is better)
Translates to: FLPGILEEVDHVLLA*LLVLHEAIKPKKSR
Trigger: CCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR TCA 90 bp TTGAGGACAGTGTTGAACTGCTCCATGGTTAGTAGCCCCTCGTTCTaGCTGTCAGCATTTGTCATCTCCTTCAGCAGCTGGGCTACTGTC +
Preference number: 1 (lower is better)
Translates to: LRTVLNCSMVSSPSF*LSAFVISFSSWATV
Trigger: GACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 90 bp TCAGCATTTGTCATCTCCTTCAGCAGCTGGGCTACTGTCTCCTTCTaGGTGACATACACATTCTCACTCCGCTTTCCCATCAAGACTGCA +
Preference number: 1 (lower is better)
Translates to: SAFVISFSSWATVSF*VTYTFSLRFPIKTA
Trigger: TGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR TCA 90 bp CATTTGTCATCTCCTTCAGCAGCTGGGCTACTGTCTCCTTCTGGGTaGCATACACATTCTCACTCCGCTTTCCCATCAAGACTGCATAGA +
Preference number: 1 (lower is better)
Translates to: HLSSPSAAGLLSPSG*HTHSHSAFPSRLHR
Trigger: TCTATGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp TGTAAGTACTCGTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTaGACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGT +
Preference number: 1 (lower is better)
Translates to: CKYSSFSSMYCSQSF*TKGSLWPSSSSINS
Trigger: ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 90 bp AGAGTCACTTCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTCTCATCCATGTATTGTTCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: RVTSSWSSMPSSCFS*CKYSSFSSMYCSQS
Trigger: ACTCTGGGAACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp GAACCAATCTCTTCCAGGAGCACGTCCACCAGCTGGTCGCTGTTCTaGCCCTCAGCCAGCATCTGCCAGCGCTCTGGGCCCCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: EPISSRSTSTSWSLF*PSASICQRSGPPAT
Trigger: GGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGTTGCTGCTGCTGGGATaGCAGCCCCCTGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWLLLLG*QPPASI
Trigger: GATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAA...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCTGGTCGCTGTTCTTaGCCTCAGCCAGCATCTGCC +
Preference number: 2 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWAGRCS*PQPASA
Trigger: GGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGC...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGG +
Preference number: 2 (lower is better)
Translates to: ALGPVRPRRGSALDLLQLDMSSR*YRSSFR
Trigger: CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTC...GAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCCATCTGCCAGCGCTCTaGGCCCCCAGCCACCACATC +
Preference number: 2 (lower is better)
Translates to: SFSRSSPEPISSRSTSTSHLPAL*APSHHI
Trigger: GATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATG...GCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: ALGPVRPRRGSALDLLQLLLSSI*VRVRSC
Trigger: GCAAGACCTGACCCGCACGCAGATGGAACTCAACAA...GAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQAAAWK*AGSPAA
Trigger: AGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGC...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGCATCTGCCAGCGCTCTaGGCCCCCAGCCACCACATC +
Preference number: 2 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQHLPAL*APSHHI
Trigger: GATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATG...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp TGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTaGGGCAGAGTCACTTCCTCATGGAGTTCTATGCCAAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CLSRLGSMVIRPPRS*GRVTSSWSSMPSSC
Trigger: GCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGGCCAGCACCTGCTCCTaGAGATCCTTGTTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMASTCS*RSLLVF
Trigger: GAAGACCAACAAGGATCTTCAGGAGCAGGTGCTGGC...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTTGGGGCCCTGCCGGCTaGCCTCACCTTTGCACTTGG +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCWGPAG*PHLCTW
Trigger: CCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCA...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CAA 90 bp CCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATaGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCATGAGGAT +
Preference number: 2 (lower is better)
Translates to: PRRGSALDLLQLREE*VPFLQRAHVQLHED
Trigger: ATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp TCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGCAGGCGTCTCTTGCCGGTTGCTaGCAGAGCCTCAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: SSILMPESVVKPVPAPQASLAGC*QSLKGM
Trigger: CATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGAGA...CGCCTGCGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTG +
Preference number: 2 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWSSEKN*SRSFSV
Trigger: CACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCT...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCSQAAA*KCAGSP
Trigger: AGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACT...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp TCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: SFSRSSPEPISSRSTSTSSCAAA*GSHAPC
Trigger: GCAAGGAGCATGAGATCCTCATGCAGCTGCACATGA...GCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCCACCACATCTTTaGACTTGGTCCAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: EVFLPQQPRTNLFQEHVHQPPHL*TWSSQA
Trigger: GGCCTGACTGGACCAAGTGCAAAGATGTGGTGGCTG...GTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGAGTTCTTCCTCAGTTTaGTCACCTCGCTCTGCAATG +
Preference number: 2 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWSSSSV*SPRSAM
Trigger: CATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACT...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp ACATCTGCATGTGGGGAGAGGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACCAGATGCCTGGCGACTaGGCTAATGACATGTCCTCC +
Preference number: 2 (lower is better)
Translates to: TSACGERELESGPTCKQDQMPGD*ANDMSS
Trigger: GGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTG...GTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCACATGCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTGGCCCCCTCGCAGCTTaGGCAGAGTCACTTCCTCAT +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCGPLAA*AESLPH
Trigger: ATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCC...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTGTGCGGGTCAGGTCTTaGCGGGTCATCTTAAGAGCC +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCVRVRS*RVILRA
Trigger: GGCTCTTAAGATGACCCGGCAAGACCTGACCCGCAC...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TCTGCAGCCCCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGTGTTCTGGGAGTGGGTaGAGGAGAGACTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SAAPESSILMPESVVKPVCSGSG*RRDLGR
Trigger: CCTCCCCAAGTCTCTCCTCCACCCACTCCCAGAACA...CACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGGGGCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR-3UTR TCA 90 bp TGCAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCAGGCATCTCGCTCACTaGGGTAGTGCAGGTACTCCT +
Preference number: 2 (lower is better)
Translates to: CSSEKNWSRSFSVLMCSCRHLAH*GSAGTP
Trigger: AGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCT...GCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCTGGCCTTCATGTTGTTaGGTTCCATCTGCGTGCGGG +
Preference number: 2 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAIWPSCC*VPSACG
Trigger: CCCGCACGCAGATGGAACTCAACAACATGAAGGCCA...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp TCTGCAGCCCCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGATCCCTCAACCTaGCCTTTGCCACACCTCTTC +
Preference number: 2 (lower is better)
Translates to: SAAPESSILMPESVVKPVPDPST*PLPHLF
Trigger: GAAGAGGTGTGGCAAAGGTCAGGTTGAGGGATCTGG...CACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGGGGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR-3UTR GCA 90 bp TGCAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCGGATCTCATGCTCCTTaGGAACCTCCTCGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: CSSEKNWSRSFSVLMCSCGSHAP*EPPRSW
Trigger: CCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCC...GCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCGGATCTCATGCTCCTTaGGAACCTCCTCGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAIGSHAP*EPPRSW
Trigger: CCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCC...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCAGTGCTCATGTGCAGCTaGATGAGGATCTCATGCTCC +
Preference number: 2 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAVLMCS*MRISCS
Trigger: GGAGCATGAGATCCTCATGCAGCTGCACATGAGCAC...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACAGGACCTGGGGCCCTaGCGGCTGCCCTCACCTTTG +
Preference number: 2 (lower is better)
Translates to: LDLLFCLEREGTLEDSVEQDLGP*RLPSPL
Trigger: CAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGTCCTG...TTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAACCTCCTCGTAGCTaGCTCTCAGGGTGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHEPPRS*LSGCPA
Trigger: AGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTC...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGGAACCTCCTCGTAGCTaGCTCTCAGGGTGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: FCTKGSLWPSSSSINSEREPPRS*LSGCPA
Trigger: AGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTC...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCACGTCCTTCTTGCTTaGCTTCTTGTTCTCCACGAG +
Preference number: 2 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGHVLLA*LLVLHE
Trigger: CTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTG...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTGCCTCCATCAGCTCCTaGATTTGCTCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGASISS*ICSSVL
Trigger: CAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGC...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp TGCCAGCCCCCTGCCTCCATCAGCTCCTGGATTTGCTCTTCTGTCTaGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCTCCATG +
Preference number: 2 (lower is better)
Translates to: CQPPASISSWICSSV*RGKVLLRTVLNCSM
Trigger: CATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCTGCATGAGGATCTCATaGTCCTTGCGAACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAICMRIS*SLRTSS
Trigger: CGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCA...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATTCAGCGTGCTCATGTaGAGCTGCATGAGGATCTCA +
Preference number: 2 (lower is better)
Translates to: PGSCRCSLSACPGWGRWSFSVLM*SCMRIS
Trigger: TGAGATCCTCATGCAGCTGCACATGAGCACGCTGAA...TGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GAAGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTTCCCTCACCAGGTaGTGCTCTGGGTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: EASASTAGGPTHGFLLLHSSLTR*CSGCFL
Trigger: CAGGAAACACCCAGAGCAGCACCTGGTGAGGGAAGA...ATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR-3UTR CCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGTCTCCTCAGCTCTCATaGCCAGGATCCTCTCATTGC +
Preference number: 2 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRSPQLS*PGSSHC
Trigger: GCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGA...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCAAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPSQAAA*KCAGSP
Trigger: AGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACT...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGAGAGTCACTTCCTCATaGAGTTCTATGCCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGRVTSS*SSMPSS
Trigger: GGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCCACCACATCTGCATGTaGGGAGAGGGAGCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: WATVSFWVTYTFSLRFPIHHICM*GEGAGV
Trigger: GACTCCAGCTCCCTCTCCCCACATGCAGATGTGGTG...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR-3UTR CCA 90 bp GAAGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATGGGTGTTTCCTGTTCTaGGAGTGGGTGGAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: EASASTAGGPTHGFLLLHGCFLF*EWVEER
Trigger: TCTCTCCTCCACCCACTCCCAGAACAGGAAACACCC...ATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CAA 90 bp CAGGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTaGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATGGCT +
Preference number: 2 (lower is better)
Translates to: QASLRRLTTSFLLGF*FSTRPSNRRKAGMA
Trigger: AGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp GCCCAGGCCATGGCATCACTGGGCCCAAAGCGATGCTCCAGGAAATaGAAGAAGAAATCTGGGAACGTCTCTTTCTGCTCCTCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: AQAMASLGPKRCSRK*KKKSGNVSFCSSAR
Trigger: TCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHSCAAA*GSHAPC
Trigger: GCAAGGAGCATGAGATCCTCATGCAGCTGCACATGA...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGTCTCCTTCTGGGTaGCATACACATTCTCACTCC +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCLSPSG*HTHSHS
Trigger: GGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAG...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGTTGGTCACCTCGCTCTaGAATGAAATCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGLVTSL*NEIFSS
Trigger: TGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAA...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCAGCTCATTCAGGTCTaGGATGAGGATCTTACAGGC +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCQLIQV*DEDLTG
Trigger: GCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTG...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: FCTKGSLWPSSSSINSERLLSSI*VRVRSC
Trigger: GCAAGACCTGACCCGCACGCAGATGGAACTCAACAA...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGTGCATGAGGATCTCATaGTCCTTGCGAACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: FCTKGSLWPSSSSINSERCMRIS*SLRTSS
Trigger: CGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCA...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGGTGCGCTGGATCTCCTaGAGCTCAGAGAAGAATTGG +
Preference number: 2 (lower is better)
Translates to: FCTKGSLWPSSSSINSERVRWIS*SSEKNW
Trigger: CCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCAC...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGCTTTCCCATCAAGACTaGATAGAACTGACTCATAAC +
Preference number: 2 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMLSHQD*IELTHN
Trigger: GTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAG...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCAATCAGCTCCTGGATTTaGTCTTCTGTCTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PGSCRCSLSACPGWGRWSISSWI*SSVLRG
Trigger: CCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGAT...TGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GGGTTAGCAGGACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTTCTATGCCAAGCTCCTaGTTTAGCTGCTGTAAGTAC +
Preference number: 2 (lower is better)
Translates to: GLAGLEYAGCPQVPSLQASMPSS*FSCCKY
Trigger: GTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGA...AGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTCCTGCTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCACAGGGTGTCCAGCTGTaGGCAAGGACATTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPQGVQL*ARTLAL
Trigger: CAGGGCCAATGTCCTTGCCCACAGCTGGACACCCTG...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCAGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: WSSMPSSCFSCCKYSSFSGVEVR*ISCSSE
Trigger: CTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCC...TGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAAGGCCATGGCATCACTaGGCCCAAAGCGATGCTCCA +
Preference number: 2 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSRPWHH*AQSDAP
Trigger: TGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCT...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp AACGTCTCTTTCTGCTCCTCAGCAAGACGTTCCTTCCAGGCATCCTaGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: NVSFCSSARRSFQAS*RRLTTSFLLGFLFS
Trigger: GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGCATCTCGCTCACTaGGGTAGTGCAGGTACTCCT +
Preference number: 2 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSRHLAH*GSAGTP
Trigger: AGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCT...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CAGGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCTTCAGCGTGCTCATGTaGAGCTGCATGAGGATCTCA +
Preference number: 2 (lower is better)
Translates to: QASLRRLTTSFLLGFLFSFSVLM*SCMRIS
Trigger: TGAGATCCTCATGCAGCTGCACATGAGCACGCTGAA...GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTC +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCSSCFS*CKYSSF
Trigger: GAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCT...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp GAGATTTCATATTTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATaGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: EISYFSSALMARILS*QSSFTVTSLAFRGS
Trigger: GGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR-3UTR GCA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCCAGCTCATTCAGGTCTaGGATGAGGATCTTACAGGC +
Preference number: 2 (lower is better)
Translates to: WATVSFWVTYTFSLRFPIQLIQV*DEDLTG
Trigger: GCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTG...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCAAGACTGCATCTCCTCAGCTCTCATaGCCAGGATCCTCTCATTGC +
Preference number: 2 (lower is better)
Translates to: VSFWVTYTFSLRFPIKTASPQLS*PGSSHC
Trigger: GCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGA...TGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACCTGAAGATCCTTGTTaGTCTTCTCCTGCATTTCAA +
Preference number: 2 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAPEDPC*SSPAFQ
Trigger: TTGAAATGCAGGAGAAGACCAACAAGGATCTTCAGG...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTGCTACTGTCTCCTTCTaGGTGACATACACATTCTCA +
Preference number: 2 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCATVSF*VTYTFS
Trigger: TGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGC...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACTTGGTCACCTCGCTCTaGAATGAAATCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHLVTSL*NEIFSS
Trigger: TGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAA...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGTATAAGCCCAGGCCATaGCATCACTGGGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: VLLIHVLFPEFLHKGLTLYKPRP*HHWAQS
Trigger: GCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATA...CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATTCATCTTCTCTTTCTTaGGCAGGGAGATTTCATATT +
Preference number: 2 (lower is better)
Translates to: EGLAHVGVHCLLVQAGVDSSSLS*AGRFHI
Trigger: AATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGA...ATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCAGTAGTTGAGCAAGTCTaGATTGCTGCTGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: WSSMPSSCFSCCKYSSFSVVEQV*IAAAGM
Trigger: CATCCCAGCAGCAGCAATGCAGACTTGCTCAACTAC...TGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTTGTTCCCAGAGTTTTTaGACAAAGGGCTCACTCTGG +
Preference number: 2 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSCSQSF*TKGSLW
Trigger: CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACA...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp GTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGATCTCCTTCAGCAGCTaGGCTACTGTCTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VLLIHVLFPEFLHKGLTLISFSS*ATVSFW
Trigger: CCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGAT...CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCATCTCCTTCAGCAGCTaGGCTACTGTCTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCISFSS*ATVSFW
Trigger: CCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGAT...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGCCTCCATCAGCTCCTaGATTTGCTCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVASISS*ICSSVL
Trigger: CAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGC...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 90 bp CGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTaGATGGAGGATAGTAATGGCTTGTACGTTTTGAAGTCCTCTATG +
Preference number: 2 (lower is better)
Translates to: RIFSLWWASIPSYAF*MEDSNGLYVLKSSM
Trigger: CATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR-3UTR TCA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGCATTCAGGTCTGCGATaGGGATCTTACAGGCATCTC +
Preference number: 2 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWHSGLR*GSYRHL
Trigger: GAGATGCCTGTAAGATCCTCATCGCAGACCTGAATG...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCCCTGAAGATCCTTGTTaGTCTTCTCCTGCATTTCAA +
Preference number: 2 (lower is better)
Translates to: WATVSFWVTYTFSLRFPIPEDPC*SSPAFQ
Trigger: TTGAAATGCAGGAGAAGACCAACAAGGATCTTCAGG...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTG +
Preference number: 2 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCSSEKN*SRSFSV
Trigger: CACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCT...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR GCA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGATCAGCTCCTGGATTTaGTCTTCTGTCTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWISSWI*SSVLRG
Trigger: CCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGAT...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp GTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGATGCTCCAGGAAATTaGAGAAGAAATCTGGGAACG +
Preference number: 2 (lower is better)
Translates to: VLLIHVLFPEFLHKGLTLDAPGN*RRNLGT
Trigger: CGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATC...CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR TCA 90 bp TTCTCTTTCTTGAGCAGGGAGATTTCATATTTCTCCTCAGCTCTCATGGCCAGGCCTCATACGCATTCTTaGTGGAGGATAGTAATGGCT +
Preference number: 2 (lower is better)
Translates to: FSFLSREISYFSSALMARPHTHS*WRIVMA
Trigger: AGCCATTACTATCCTCCATCAAGAATGCGTATGAGG...CCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR-3UTR TCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCATCATCTTCTCTTTCTTaGGCAGGGAGATTTCATATT +
Preference number: 2 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSSSSLS*AGRFHI
Trigger: AATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGA...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGATCTTCTCCCTTTGGTaGGCCAGCATCCCCTCATAC +
Preference number: 2 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKIFSLW*ASIPSY
Trigger: GTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGAT...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR-3UTR CCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCCGAATCTTCTCCCTTTaGTGGGCCAGCATCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFRIFSL*WASIPS
Trigger: TGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCG...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR-3UTR CCA 90 bp CTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAAATTGAAGAAGAAATCTaGGAACGTCTCTTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LDLLFCLEREGTLEDSVEIEEEI*ERLFLL
Trigger: GAGCAGAAAGAGACGTTCCCAGATTTCTTCTTCAAT...TTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp ACCTGGGGCCCTGCCGGCTGCCCTCACCTTTGCACTTaGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGA +
Preference number: 3 (lower is better)
Translates to: TWGPAGCPHLCT*SSQAAAWKCAG
Trigger: TCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR GCA 72 bp CTTCCAGGAGCACGTCCACCAGCTGGTCGCTGTTCTTaGCCTCAGCCAGCATCTGCCAGCGCTCTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: LPGARPPAGRCS*PQPASASALGP
Trigger: GGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp GGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACCTaGGGCCCTGCCGGCTGCCCTCACCTTTGCACTTGG +
Preference number: 3 (lower is better)
Translates to: GSWSLGPHVSRT*GPAGCPHLCTW
Trigger: CCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR-3UTR CAA 90 bp GAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCCCTCACCTTTGCACTaGGTCCAGTCAGGCCGCGGC +
Preference number: 3 (lower is better)
Translates to: EVFLPQQPRTNLFQEHVHPSPLH*VQSGRG
Trigger: GCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGG...GTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR TCA 72 bp AGCTTGCAGGCTCTGGCTCTCGAGGTCCCACACGCCTaGTGTCAATCACCTGAAGCCGCTCCAGGGCAGTCT +
Preference number: 3 (lower is better)
Translates to: SLQALALEVPHA*CQSPEAAPGQS
Trigger: AGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp CAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTaGAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: QSGRGVEVRWIS*SSEKNWSRSFS
Trigger: GCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp GACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTaGAGGCTCTGGCTCTCGAGGTCCCACACGCCTGAT +
Preference number: 3 (lower is better)
Translates to: DWSTQAAHKFLA*RLWLSRSHTPD
Trigger: ATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp CACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAGAAGAATTGGTCCCGT +
Preference number: 3 (lower is better)
Translates to: HLVQSGRGVEVR*ISCSSEKNWSR
Trigger: ACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp AGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATaGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: RCSLSACPGWGR*SSGPLAAWAES
Trigger: TGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp GGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTaGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: GSCRCSLSACPG*GRWSSGPLAAW
Trigger: CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp CCTCACCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: PHLCTWSSQAAA*KCAGSPAAQRR
Trigger: TCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CCA 72 bp CCACATCTTTGCACTTGGTCCAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: PHLCTWSSQAAA*KCAGSPAAQRR
Trigger: TCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR CCA 72 bp ACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTCTaGCTCTCGAGGTCCCACACGCCTGATGTCAATCAC +
Preference number: 3 (lower is better)
Translates to: TQAAHKFLACRL*LSRSHTPDVNH
Trigger: GTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTAGGCCCCCTCGCAGCTaGGGCAGAGTCACTTCCTCA +
Preference number: 3 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCRPPRS*GRVTSS
Trigger: TGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCT...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCCGTGCGGGTCAGGTCTaGCCGGGTCATCTTAAGAGC +
Preference number: 3 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAIRAGQV*PGHLKS
Trigger: GCTCTTAAGATGACCCGGCAAGACCTGACCCGCACG...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR TCA 72 bp GGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGCGAACCTCCTCGTAGC +
Preference number: 3 (lower is better)
Translates to: GPVPSACSCAAA*GSHAPCEPPRS
Trigger: GCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp CTTTGCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCTCAGAGAAGAATTGGT +
Preference number: 3 (lower is better)
Translates to: LCTWSSQAAAWK*AGSPAAQRRIG
Trigger: ACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp CCTCAAGGGAATGCTGATGCCTCTTCCCTCACCAGGTaGTGCTCTGGGTGTTTCCTGTTCTGGGAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: PQGNADASSLTR*CSGCFLFWEWV
Trigger: CACCCACTCCCAGAACAGGAAACACCCAGAGCAGCACCTGGTGAGGGAAGAGGCATCAGCATTCCCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CCA 72 bp ATGCCTGGCGACTGGGCTAATGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGGTCTGCGATGAGGATC +
Preference number: 3 (lower is better)
Translates to: MPGDWANDMSSR*YRSSFRSAMRI
Trigger: GATCCTCATCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCCTCTTGAGGACAGTGTaGAACTGCTCCATGGTTAGT +
Preference number: 3 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSLLRTV*NCSMVS
Trigger: ACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAG...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGCTCTTGAGGACAGTGTaGAACTGCTCCATGGTTAGT +
Preference number: 3 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMLLRTV*NCSMVS
Trigger: ACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAG...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR TCA 72 bp TGGGGACCACATCTCCAAAGTTGGCCTTCATGTTGTTaGGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGG +
Preference number: 3 (lower is better)
Translates to: WGPHLQSWPSCC*VPSACGSGLAG
Trigger: CCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGATGTGGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp CATGTCCTCCCGCTGGTACCGCAGCTCATTCAGGTCTaGGATGAGGATCTTACAGGCATCTCGCTCACTGAG +
Preference number: 3 (lower is better)
Translates to: HVLPLVPQLIQV*DEDLTGISLTE
Trigger: CTCAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp GAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: EVRWISCSSEKN*SRSFSVLMCSC
Trigger: GCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGTTGACCACGTCCTTCTaGCTTGGCTTCTTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGLTTSF*LGFLFS
Trigger: GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAA...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTTTGAGCAAGTCTGCATaGCTGCTGCTGGGATGCCAG +
Preference number: 3 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCLSKSA*LLLGCQ
Trigger: CTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAA...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp AATTGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTaGATGAGGATCTCATGCTCCTTGCGAACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: NWSRSFSVLMCS*MRISCSLRTSS
Trigger: CGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CGTGCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCCAGGATCCTCTCATaGCAGTCCTCATTCACAGTG +
Preference number: 3 (lower is better)
Translates to: RAHVQLHEDLMLLANLLVARILS*QSSFTV
Trigger: CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGC...TACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTTTGTTCCCAGAGTTTTaGCACAAAGGGCTCACTCTG +
Preference number: 3 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGLFPEF*HKGLTL
Trigger: CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAA...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp GAGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATGTaGAGCTGCATGAGGATCTCATGCTCCTTGCGAACC +
Preference number: 3 (lower is better)
Translates to: EKNWSRSFSVLM*SCMRISCSLRT
Trigger: GGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp TCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATaGCTTCCCCATAGCCCAGACCAGGGAAGAAGTCTT +
Preference number: 3 (lower is better)
Translates to: SPRGHQTEEKQG*LPHSPDQGRSL
Trigger: AAGACTTCTTCCCTGGTCTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CCA 72 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTaGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAG +
Preference number: 3 (lower is better)
Translates to: GILEEVDHVLLA*LLVLHEAIKPK
Trigger: CTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTCGTGCGGGTCAGGTCTaGCCGGGTCATCTTAAGAGC +
Preference number: 3 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVRAGQV*PGHLKS
Trigger: GCTCTTAAGATGACCCGGCAAGACCTGACCCGCACG...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGCAGCTCAGAGAAGAATaGGTCCCGTTCCTTCAGCGT +
Preference number: 3 (lower is better)
Translates to: FCTKGSLWPSSSSINSERQLREE*VPFLQR
Trigger: ACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTG...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGCGGCTGCCCTCACCTTaGCACTTGGTCCAGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWRLPSP*HLVQSG
Trigger: GCCTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCG...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR-3UTR CAA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGTTCTTTTACATTCTCTaGCCGGTTGCTGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: PESSILMPESVVKPVPAPFFYIL*PVADRA
Trigger: GGCTCTGTCAGCAACCGGCAAGAGAATGTAAAAGAA...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CCA 72 bp GTCATCTCCTTCAGCAGCTGGGCTACTGTCTCCTTCTaGGTGACATACACATTCTCACTCCGCTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: VISFSSWATVSF*VTYTFSLRFPI
Trigger: GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGGCCAGGATCCTCTCATaGCAGTCCTCATTCACAGTG +
Preference number: 3 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKARILS*QSSFTV
Trigger: CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGC...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAATTGGCCTTCATGTTGTaGAGTTCCATCTGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: PRPSCLASCSPRGHQTEELAFML*SSICVR
Trigger: CCGCACGCAGATGGAACTCAACAACATGAAGGCCAA...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATGGCTTCCCCACAGCTCAGAGAAGAATaGGTCCCGTTCCTTCAGCGT +
Preference number: 3 (lower is better)
Translates to: FLFSTRPSNRRKAGMASPQLREE*VPFLQR
Trigger: ACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTG...TGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCACCACATCTTTGCACTaGGTCCAGTCAGGCCGCGGC +
Preference number: 3 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCTTSLH*VQSGRG
Trigger: GCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGGT...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
3UTR-3UTR CAA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCTTCTCATCCATGTATaGTTCCCAGAGTTTTTGCAC +
Preference number: 3 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGLLIHV*FPEFLH
Trigger: GTGCAAAAACTCTGGGAACAATACATGGATGAGAAG...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CAGGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCAAGTTGGCCTTCATGTaGTTGAGTTCCATCTGCGTG +
Preference number: 3 (lower is better)
Translates to: QASLRRLTTSFLLGFLFSKLAFM*LSSICV
Trigger: CACGCAGATGGAACTCAACAACATGAAGGCCAACTT...GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR TCA 72 bp TCTCCTTCAGCAGCTGGGCTACTGTCTCCTTCTGGGTaGCATACACATTCTCACTCCGCTTTCCCATCAAGA +
Preference number: 3 (lower is better)
Translates to: SPSAAGLLSPSG*HTHSHSAFPSR
Trigger: TCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp ATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTaGCGGGTCATCTTAAGAGCCAGGGTTAACTTCACA +
Preference number: 3 (lower is better)
Translates to: MLLSSICVRVRS*RVILRARVNFT
Trigger: TGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp TCTCCAAAGTTGGCCTTCATGTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGCCGGGTCATCTTAAGA +
Preference number: 3 (lower is better)
Translates to: SPKLAFMLLSSI*VRVRSCRVILR
Trigger: TCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp TCGTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTaGACAAAGGGCTCACTCTGGCCCTCCTCATCCTCC +
Preference number: 3 (lower is better)
Translates to: SSFSSMYCSQSF*TKGSLWPSSSS
Trigger: GGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGTTCTTCCTCAGTTaGGTCACCTCGCTCTGCAAT +
Preference number: 3 (lower is better)
Translates to: PRPSCLASCSPRGHQTEEKFFLS*VTSLCN
Trigger: ATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACTT...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGCATCCTTGAGGAGGTaGACCACGTCCTTCTTGCTT +
Preference number: 3 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVASLRR*TTSFLL
Trigger: AAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGC...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAG +
Preference number: 3 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQFSSFF*SMSFSK
Trigger: CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAA...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGTTGGCCTTCATGTTGTaGAGTTCCATCTGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWLAFML*SSICVR
Trigger: CCGCACGCAGATGGAACTCAACAACATGAAGGCCAA...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCCAGAATGGCTTGTACGTTTaGAAGTCCTCTATGAAGAAC +
Preference number: 3 (lower is better)
Translates to: PLIAVLIHSDKLGLQGLQNGLYV*KSSMKN
Trigger: GTTCTTCATAGAGGACTTCAAAACGTACAAGCCATT...CTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
3UTR GCA 72 bp AGAGTCACTTCCTCATGGAGTTCTATGCCAAGCTCCTaGTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCC +
Preference number: 3 (lower is better)
Translates to: RVTSSWSSMPSS*FSCCKYSSFSS
Trigger: GGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp CGGTCCAACCCATGGTTTTCTTCTTTTACATTCTCTTaGCGGTTGCTGACAGAGCCTCAAGGGAATGCTGAT +
Preference number: 3 (lower is better)
Translates to: RSNPWFSSFTFS*RLLTEPQGNAD
Trigger: ATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGAGAATGTAAAAGAAGAAAACCATGGGTTGGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CCA 72 bp CCCAAAGCGATGCTCCAGGAAATTGAAGAAGAAATCTaGGAACGTCTCTTTCTGCTCCTCAGCAAGACGTTC +
Preference number: 3 (lower is better)
Translates to: PKAMLQEIEEEI*ERLFLLLSKTF
Trigger: GAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCAAAGTTGGCCTTCATGTaGTTGAGTTCCATCTGCGTG +
Preference number: 3 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPKLAFM*LSSICV
Trigger: CACGCAGATGGAACTCAACAACATGAAGGCCAACTT...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAATTGACCACGTCCTTCTaGCTTGGCTTCTTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: LDLLFCLEREGTLEDSVELTTSF*LGFLFS
Trigger: GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAA...TTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGTCTGACTGTCAGCATTaGTCATCTCCTTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWSDCQH*SSPSAA
Trigger: AGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGA...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR GCA 72 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTCTCATCCATGTATTGT +
Preference number: 3 (lower is better)
Translates to: SSWSSMPSSCFS*CKYSSFSSMYC
Trigger: ACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR-3UTR CAA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAG +
Preference number: 3 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVFSSFF*SMSFSK
Trigger: CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAA...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCCCAGGCTGGGGTCGATaGTCATCAGGCCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: ALGPVRPRRGSALDLLQLPGWGR*SSGPLA
Trigger: TGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGG...GAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCGTGCGAAAGGGGTGCTaGTGGCAGCTCCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: ALGPVRPRRGSALDLLQLVRKGC*WQLPTR
Trigger: GCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCAC...GAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR GCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGTGGGGCCCTGCCGGCTaGCCTCACCTTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWWGPAG*PHLCTW
Trigger: CCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCA...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp GCACTTGGTCCAGTCAGGCCGCGGCGTGGAAGTGCGCTGGATCTCCTGCAGCTCCCACATCTTTGCACTTaGTCCAGTCAGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ALGPVRPRRGSALDLLQLPHLCT*SSQAAA
Trigger: CGCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGG...GAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR GCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGTTGCTGCTGCTGGGATaGCAGCCCCCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMLLLLG*QPPASI
Trigger: GATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAA...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMSQAAA*KCAGSP
Trigger: AGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACT...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGCTGCATTGCTGCTGCTaGGATGCCAGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMLHCCC*DASPLP
Trigger: AGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAG...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGCGCTCCAGGGCAGTCTaGAGGATTTCCACCACGGCT +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWRSRAV*RISTTA
Trigger: AGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCG...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TGCAGCTCAGAGAAGAATTGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTGCGGGCGGAGTCAGGGATaGGCCACGCCCCCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: CSSEKNWSRSFSVLMCSCGRSQG*ATPPSL
Trigger: TAGGCTCGGGGGCGTGGCGCATCCCTGACTCCGCCC...GCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGTTAGCAGGACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTCATCTGCCAGCGCTCTaGGCCCCCAGCCACCACATC +
Preference number: 4 (lower is better)
Translates to: GLAGLEYAGCPQVPSLQAHLPAL*APSHHI
Trigger: GATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATG...AGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTCCTGCTAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGCAGGGTGTCCAGCTGTaGGCAAGGACATTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMQGVQL*ARTLAL
Trigger: CAGGGCCAATGTCCTTGCCCACAGCTGGACACCCTG...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGCATGTAAGCAGGACCTaGGGCCCTGCCGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGHVSRT*GPAGCP
Trigger: AGGGCAGCCGGCAGGGCCCCAGGTCCTGCTTACATG...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp TCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGCAGGCGTCCCCTGCTGGCCTTTaGGGAAAGCTCTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SSILMPESVVKPVPAPQASPAGL*GKLSPL
Trigger: CAGCGGGGAGAGCTTTCCCCAAAGGCCAGCAGGGGA...CGCCTGCGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCAGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAAAAWK*AGSPAA
Trigger: AGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGC...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCCTCGTCACCCTCCTCTaGCATTTCCGACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSLVTLL*HFRLRE
Trigger: CTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAG...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CCTGGCGACTGGGCTAATGACATGTCCTCCCGCTGGTACCGCAGCTCATTCAGGCCACCCATGGAGAACTaGCCAGTCAGCGTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: PGDWANDMSSRWYRSSFRPPMEN*PVSVLR
Trigger: ACGAAGGACGCTGACTGGTCAGTTCTCCATGGGTGG...CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR TCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGTGGCCTTCATGTTGTTaGGTTCCATCTGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMWPSCC*VPSACG
Trigger: CCCGCACGCAGATGGAACTCAACAACATGAAGGCCA...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCTGCCGCGGCGTGGAAGTaGGCTGGATCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AHVQLHEDLMLLANLLVAAAAWK*AGSPAA
Trigger: AGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGC...AGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGTGGTACCGCGACTGCTaGCAGGCCATGACCCACGGG +
Preference number: 4 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRWYRDC*QAMTHG
Trigger: CCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCA...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCCCAAGTACTGGGGCTTaGCAGTGCGAAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SFSRSSPEPISSRSTSTSPSTGA*QCERGA
Trigger: AGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGG...GCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp AGACTTGGGGAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGGCTGGGGTCGATaGTCATCAGGCCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RLGEGGAAWDGICPYYFLPGWGR*SSGPLA
Trigger: TGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGG...TAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTCCCCAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CCAGAGCCCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTCGAAAGGGGTGCTGCTaGCAGCTCCAGCGTCCTTCG +
Preference number: 4 (lower is better)
Translates to: PEPESSPFGGPASPHTHSRKGCC*QLQRPS
Trigger: CGAAGGACGCTGGAGCTGCCAGCAGCACCCCTTTCG...AGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR GCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTGCGGGTCAGGTCTTaGCGGGTCATCTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGVRVRS*RVILRA
Trigger: GGCTCTTAAGATGACCCGGCAAGACCTGACCCGCAC...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCGTGCTCATGTGCAGCTaGATGAGGATCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSVLMCS*MRISCS
Trigger: GGAGCATGAGATCCTCATGCAGCTGCACATGAGCAC...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGTTCAGCGTGCTCATGTaGAGCTGCATGAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWFSVLM*SCMRIS
Trigger: TGAGATCCTCATGCAGCTGCACATGAGCACGCTGAA...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGAGGACAGTGTTGAACTaGTCCATGGTTAGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWRTVLN*SMVSSP
Trigger: GGGGCTACTAACCATGGAGCAGTTCAACACTGTCCT...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGTTCAGCCACAGTCAGTaGAGAGGCCTGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PESSILMPESVVKPVPAPFSHSQ*RGLAWP
Trigger: GGGCCAAGCCAGGCCTCTGCACTGACTGTGGCTGAA...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGATGGTACCGCGACTGCTaGCAGGCCATGACCCACGGG +
Preference number: 4 (lower is better)
Translates to: PNLLPLVGQHPLIRILDGWYRDC*QAMTHG
Trigger: CCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCA...TCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGAAAGGGGTGCTGCTaGCAGCTCCCTACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGARKGCC*QLPTRF
Trigger: GAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCG...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp CGTGCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAAGTCAGGCCGCGGCGTaGAAGTGCGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAHVQLHEDLMLLANLLVSQAAA*KCAGSP
Trigger: AGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACT...TACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp ACATCTGCATGTGGGGAGAGGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACTCTGCTTGTCCAGGCTaGGGTCGATGGTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: TSACGERELESGPTCKQDSACPG*GRWSSG
Trigger: GCCTGATGACCATCGACCCCAGCCTGGACAAGCAGA...GTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCACATGCAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCCCACCTCACCAGATCCCTCAACCTGACCTTTGCCACACCTCTTCAGCCACACGCTCCAGGGCAGTCTaGAGGATTTCCACCACGGCT +
Preference number: 4 (lower is better)
Translates to: SPPHQIPQPDLCHTSSATRSRAV*RISTTA
Trigger: AGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCG...TGTGGCTGAAGAGGTGTGGCAAAGGTCAGGTTGAGGGATCTGGTGAGGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGATCTTCTCCCTTTGGTaGGCTGCAGCCTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWIFSLW*AAALVP
Trigger: AGGAACTAAGGCTGCAGCCCACCAAAGGGAGAAGAT...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp GAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTATGCAGAGGCCTGGCTTaGCCCGCAGACCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGAAWDGICPYYFLPVLCRGLA*PADLQP
Trigger: GGGCTGGAGGTCTGCGGGCCAAGCCAGGCCTCTGCA...TAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR TCA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCAGTAGCCCCTCGTTCTaGCTGTCAGCATTTGTCATC +
Preference number: 4 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSSSPSF*LSAFVI
Trigger: GATGACAAATGCTGACAGTCAGAACGAGGGGCTACT...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGCTGATGTCAATCACCTaGAGCCGCTCCAGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQLMSIT*SRSRAV
Trigger: GACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAG...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TCTTGCCGGTTGCTGACAGAGCCTCAAGGGAATGCTGATGCCTCTTCCCTCACCGCCTCAAGGGAATGCTaGTGCCTCTTCCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SCRLLTEPQGNADASSLTASREC*CLFPHQ
Trigger: CTGGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGC...GGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp ATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCCCTGTGGTACCGCGACTaGTGGCAGGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: ILSLQSSFTVTSLAFRGSLWYRD*WQAMTH
Trigger: GTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAG...GGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTGCTGGTCGCTGTTCTTaGCCTCAGCCAGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCAGRCS*PQPASA
Trigger: GGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGC...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCCTGGGCCCAAAGCGATaGTCCAGGAAATTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSLGPKR*SRKLKK
Trigger: CTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAG...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGTTGCTGCTGCTGGGATaGCAGCCCCCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLLLLLG*QPPASI
Trigger: GATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAA...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGGGCGGAGTCAGGGATaGGCCACGCCCCCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVGRSQG*ATPPSL
Trigger: TAGGCTCGGGGGCGTGGCGCATCCCTGACTCCGCCC...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGTGGTACCGCGACTGCTaGCAGGCCATGACCCACGGG +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKWYRDC*QAMTHG
Trigger: CCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCA...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGCGGACGAGAAGCTGTaGTACCGCGACTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHADEKL*YRDCWQ
Trigger: CTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGC...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGGGCCACTGGTGTATGTaGGCCATGGGGACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: FCTKGSLWPSSSSINSERGHWCM*AMGTGA
Trigger: GGCACCTGTCCCCATGGCCCACATACACCAGTGGCC...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCGVEVR*ISCSSE
Trigger: CTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCC...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCTTGCCGGTTGCTGACAGAGCCTCAAGGGAATGCTGATGCCTCTTCCCTCACCTCTGCTTGTCCAGGCTaGGGTCGATGGTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SCRLLTEPQGNADASSLTSACPG*GRWSSG
Trigger: GCCTGATGACCATCGACCCCAGCCTGGACAAGCAGA...GGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGCTCGTCACCCTCCTCTaGCATTTCCGACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PESSILMPESVVKPVPAPLVTLL*HFRLRE
Trigger: CTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAG...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTTACAGCCGGTCGCCATaGCGACCAGGCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSYSRSP*RPGPRG
Trigger: GCCTCTGGGGCCTGGTCGCCATGGCGACCGGCTGTA...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACTCAGCACCCGCGGCCTaGGAAGCTGTGGTAGCGTAC +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHSAPAA*EAVVAY
Trigger: GTACGCTACCACAGCTTCCCAGGCCGCGGGTGCTGA...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AGACTTGGGGAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTAGCCCCACCCTCTCCTTaGTGTTTCTGCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLGEGGAAWDGICPYYFLAPPSP*CFCSPR
Trigger: TCTGGGGCTGCAGAAACACCAAGGAGAGGGTGGGGC...TAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTCCCCAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR TCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGAGTCCTCATTCACAGTaGCAAGCTTGGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGSPHSQ*QAWPSG
Trigger: CCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACT...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTGGCCTTCATGTTGTTaGGTTCCATCTGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHWPSCC*VPSACG
Trigger: CCCGCACGCAGATGGAACTCAACAACATGAAGGCCA...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGATCCTCCATAAACAGTaGGCGGTAGTTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMILHKQ*AVVEQV
Trigger: GACTTGCTCAACTACCGCTCACTGTTTATGGAGGAT...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGCTGATGTCAATCACCTaGAGCCGCTCCAGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRLMSIT*SRSRAV
Trigger: GACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAG...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCCGGCAGCGGGTGCCCTaGGAGTCAACCACTACAGCC +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSRQRVP*ESTTTA
Trigger: GGCTGTAGTGGTTGACTCTCAGGGCACCCGCTGCCG...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAACTGTGGTACCGCGACTaGTGGCAGGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: PRPSCLASCSPRGHQTEELWYRD*WQAMTH
Trigger: GTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAG...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QDPLIAVLIHSDKLGLQGPGWNL*PGPAGG
Trigger: TCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGG...CCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR GCA 90 bp GAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EVFLPQQPRTNLFQEHVHLLSSI*VRVRSC
Trigger: GCAAGACCTGACCCGCACGCAGATGGAACTCAACAA...GTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCAGTCTGCATTGCTGCTaGTGGGATGCCAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: QASLRRLTTSFLLGFLFSSLHCC*WDASPL
Trigger: CAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACT...GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGGCAAGTCTGCATTGCTaGTGCTGGGATGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FCTKGSLWPSSSSINSERASLHC*CWDASP
Trigger: GGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGC...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGGTGCGAAAGGGGTGCTaGTGGCAGCTCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKVRKGC*WQLQRP
Trigger: AGGACGCTGGAGCTGCCAGCAGCACCCCTTTCGCAC...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCACAGGTGCCCACCCATaGAGAACTGACCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAITGAHP*RTDQSA
Trigger: CGCTGACTGGTCAGTTCTCCATGGGTGGGCACCTGT...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp CCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATATAAGCCCAGGCCATaGCATCACTGGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGSCRCSLSACPGWGRWSYKPRP*HHWAQS
Trigger: GCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATA...TGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCGGCCCCCTCGCAGCTTaGGCAGAGTCACTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFGPLAA*AESLPH
Trigger: ATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCC...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGGGCCCCCTCGCAGCTTaGGCAGAGTCACTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLGPLAA*AESLPH
Trigger: ATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCC...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCCTCACCTTTGCACTTaGTCCAGTCAGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKPHLCT*SSQAAA
Trigger: CGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGG...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGCACCACATCTGCATGTaGGGAGAGGGAGCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRHHICM*GEGAGV
Trigger: GACTCCAGCTCCCTCTCCCCACATGCAGATGTGGTG...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTAGCGAGCCCCAGGGCAGATaGAGGGATCTGTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GRCCLGWNLPILLPTSFSEPQGR*RDLWAN
Trigger: GTTTGCCCACAGATCCCTCCATCTGCCCTGGGGCTC...GCTAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp AGACTTGGGGAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTATGTTCTGGGAGTGGGTaGAGGAGAGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLGEGGAAWDGICPYYFLCSGSG*RRDLGR
Trigger: CCTCCCCAAGTCTCTCCTCCACCCACTCCCAGAACA...TAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTCCCCAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CAA 72 bp CTGGGGACCACATCTCCAAAGTTGGCCTTCATGTTGTaGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: LGTTSPKLAFML*SSICVRVRSCR
Trigger: CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGATGTGGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 72 bp GGAAGTGCGCTGGATCTCCTGCAGCTCAGAGAAGAATaGGTCCCGTTCCTTCAGCGTGCTCATGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSALDLLQLREE*VPFLQRAHVQL
Trigger: CAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGSVLRF*RSLRFW
Trigger: CCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCT...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CCAGAGCCCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTAGTCCTCATTCACAGTaGCAAGCTTGGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PEPESSPFGGPASPHTHSSPHSQ*QAWPSG
Trigger: CCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACT...AGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR TCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCCACTACAGCCGATTTaGCCCCAGGTACCAGAACTG +
Preference number: 4 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCPLQPI*PQVPEL
Trigger: CAGTTCTGGTACCTGGGGTCAAATCGGCTGTAGTGG...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR GCA 90 bp GCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCTGGATCTCATGCTCCTTaGGAACCTCCTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHVQLHEDLMLLANLLVAGSHAP*EPPRSW
Trigger: CCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCC...AGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTGCATGAGGATCTCATaGTCCTTGCGAACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHCMRIS*SLRTSS
Trigger: CGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCA...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp AGCCCAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTGTGCGCTGGATCTCCTaGAGCTCAGAGAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: SPDQGRSLSPAAAPNQSLVRWIS*SSEKNW
Trigger: CCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCAC...AAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp ACATCTGCATGTGGGGAGAGGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACCTGGGCCCAAAGCGATaGTCCAGGAAATTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TSACGERELESGPTCKQDLGPKR*SRKLKK
Trigger: CTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAG...GTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCACATGCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR GCA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTAGGACAGTGTTGAACTaGTCCATGGTTAGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGRTVLN*SMVSSP
Trigger: GGGGCTACTAACCATGGAGCAGTTCAACACTGTCCT...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCCCTCATGGAGTTCTATaGCAAGCTCCTGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SFSRSSPEPISSRSTSTSPHGVL*QAPALA
Trigger: AGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGG...GCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCACAAGTTCCTAGCTTaGAGGCTCTGGCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCHKFLA*RLWLSR
Trigger: CCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTG...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCTCTTTCTTGAGCAGGGAGATTTCATATTTCTCCTCAGCTCTCATGGCCAGGCAGGACCTGGGGCCCTaGCGGCTGCCCTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: FSFLSREISYFSSALMARQDLGP*RLPSPL
Trigger: CAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGTCCTG...CCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp AGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCCCAAGTACTGGGGCTTaGCAGTGCGAAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RILSLQSSFTVTSLAFRGPSTGA*QCERGA
Trigger: AGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGG...GCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHDMSSR*YRSSFR
Trigger: CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTC...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGCAGATGCCTGGCGACTaGGCTAATGACATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRQMPGD*ANDMSS
Trigger: GGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTG...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGCCTGAAGATCCTTGTTaGTCTTCTCCTGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWPEDPC*SSPAFQ
Trigger: TTGAAATGCAGGAGAAGACCAACAAGGATCTTCAGG...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGCCTCCATCAGCTCCTaGATTTGCTCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGASISS*ICSSVL
Trigger: CAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGC...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGCGCTCCAGGGCAGTCTaGAGGATTTCCACCACGGCT +
Preference number: 4 (lower is better)
Translates to: FSSALMARILSLQSSFTVRSRAV*RISTTA
Trigger: AGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCG...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCTACAGCCGGTCGCCATaGCGACCAGGCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCYSRSP*RPGPRG
Trigger: GCCTCTGGGGCCTGGTCGCCATGGCGACCGGCTGTA...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATCGAATCTTCTCCCTTTaGTGGGCAGCGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: EGLAHVGVHCLLVQAGVDRIFSL*WAASFV
Trigger: AACGAAGGACGCTGCCCACCAAAGGGAGAAGATTCG...ATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR CCA 90 bp CAGATGGAGGGATCTGTGGGCAAACTGGGTCTCAGGTACCTGACTTTCCTCTGTGAGGGAGGTGCTGCCTaGGATGGAATCTGCCCATAC +
Preference number: 4 (lower is better)
Translates to: QMEGSVGKLGLRYLTFLCEGGAA*DGICPY
Trigger: GTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTC...ACAGAGGAAAGTCAGGTACCTGAGACCCAGTTTGCCCACAGATCCCTCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CAA 72 bp CTCCTGGGGACCACATCTCCAAAGTTGGCCTTCATGTaGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLGTTSPKLAFM*LSSICVRVRSC
Trigger: GCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGATGTGGTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp ACATCTGCATGTGGGGAGAGGGAGCTGGAGTCTGGGCCCACATGTAAGCAGGACATCCTCCATAAACAGTaGGCGGTAGTTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TSACGERELESGPTCKQDILHKQ*AVVEQV
Trigger: GACTTGCTCAACTACCGCTCACTGTTTATGGAGGAT...GTCCTGCTTACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCACATGCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR TCA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCCCAGATCCCTCAACCTaGCCTTTGCCACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFPDPST*PLPHLF
Trigger: GAAGAGGTGTGGCAAAGGTCAGGTTGAGGGATCTGG...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR TCA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTCTCTTGCCGGTTGCTaGCAGAGCCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFSLAGC*QSLKGM
Trigger: CATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGAGA...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCACCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSPGWNL*PGPAGG
Trigger: TCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGG...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCATTCAGCGTGCTCATGTaGAGCTGCATGAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAFSVLM*SCMRIS
Trigger: TGAGATCCTCATGCAGCTGCACATGAGCACGCTGAA...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGCTGGAGTACGCAGGCTaGCCACAAGTTCCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLLEYAG*PQVPSL
Trigger: CAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAG...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGACGTGGGTGCCTTTTTaGGGGATCTGCGAGATACTT +
Preference number: 4 (lower is better)
Translates to: PESSILMPESVVKPVPAPTWVPF*GICEIL
Trigger: AAGTATCTCGCAGATCCCGCAAAAAGGCACCCACGT...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGGCCTGGGATGGAATCTaGCCATACTACTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: PESSILMPESVVKPVPAPAWDGI*PYYFLP
Trigger: TGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGC...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTCTTCCCTCACCAGGTaGTGCTCTGGGTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFSSLTR*CSGCFL
Trigger: CAGGAAACACCCAGAGCAGCACCTGGTGAGGGAAGA...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGGTGTATGTGGGCCATaGGGACAGGTGCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSGVCGP*GQVPTH
Trigger: ATGGGTGGGCACCTGTCCCCATGGCCCACATACACC...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp CAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCGAATCTTCTCCCTTTaGTGGGCCAGCATCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QDPLIAVLIHSDKLGLQGRIFSL*WASIPS
Trigger: TGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCG...CCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCTCTCCTCAGCTCTCATaGCCAGGATCCTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAISPQLS*PGSSHC
Trigger: GCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGA...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACCAGATGCCTGGCGACTaGGCTAATGACATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHQMPGD*ANDMSS
Trigger: GGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTG...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGATTGAAGAAGAAATCTaGGAACGTCTCTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSACPGWGRWSSGPLAAWIEEEI*ERLFLL
Trigger: GAGCAGAAAGAGACGTTCCCAGATTTCTTCTTCAAT...CCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGAGGCCATGGCATCACTaGGCCCAAAGCGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKRPWHH*AQSDAP
Trigger: TGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCT...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TGGCATTTCCGACTCAGGGAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTATCTCCTTCAGCAGCTaGGCTACTGTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WHFRLRELEGLAHVGVHCISFSS*ATVSFW
Trigger: CCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGAT...ACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACAGAGTCACTTCCTCATaGAGTTCTATGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVFLPQQPRTNLFQEHVHRVTSS*SSMPSS
Trigger: GGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT...GTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAACTCGTCACCCTCCTCTaGCATTTCCGACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRPSCLASCSPRGHQTEELVTLL*HFRLRE
Trigger: CTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAG...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGGTAGCAAAGGTGGACTaGGACCCGGCAGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWVAKVD*DPAAGA
Trigger: GGCACCCGCTGCCGGGTCCCAGTCCACCTTTGCTAC...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACCGAATCTTCTCCCTTTaGTGGGCTGCAGCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHRIFSL*WAAALV
Trigger: AACTAAGGCTGCAGCCCACCAAAGGGAGAAGATTCG...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CAA 72 bp TTCTGCTCCTCAGCAAGACGTTCCTTCCAGGCATCCTaGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCSSARRSFQAS*RRLTTSFLLGF
Trigger: GAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGAGGCATCTCGCTCACTaGGGTAGTGCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: FSSALMARILSLQSSFTVRHLAH*GSAGTP
Trigger: AGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCT...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCTAGTAGCCCCTCGTTCTaGCTGTCAGCATTTGTCATC +
Preference number: 4 (lower is better)
Translates to: AHVQLHEDLMLLANLLVASSPSF*LSAFVI
Trigger: GATGACAAATGCTGACAGTCAGAACGAGGGGCTACT...AGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCAAGACTGCAGAGGTCCCACACGCCTaGTGTCAATCACCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSFWVTYTFSLRFPIKTAEVPHA*CQSPEA
Trigger: GGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTC...TGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CAGATGGAGGGATCTGTGGGCAAACTGGGTCTCAGGTACCTGACTTTCCTCTGTTTCCATCCTGATGCCTaGGTCGGTAGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QMEGSVGKLGLRYLTFLCFHPDA*VGSEAS
Trigger: ACTGGCTTCACTACCGACTCAGGCATCAGGATGGAA...ACAGAGGAAAGTCAGGTACCTGAGACCCAGTTTGCCCACAGATCCCTCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCAGCAGTGCGAAAGGGGTaGTGCTGGCAGCTCCCTACT +
Preference number: 4 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPAVRKG*CWQLPT
Trigger: AGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGC...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR GCA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCGTGCGGGTCAGGTCTTaGCGGGTCATCTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSVRVRS*RVILRA
Trigger: GGCTCTTAAGATGACCCGGCAAGACCTGACCCGCAC...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTGTTCCCAGAGTTTTTaGACAAAGGGCTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHCSQSF*TKGSLW
Trigger: CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACA...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGTCTATGCCAAGCTCCTaGTTTAGCTGCTGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGSMPSS*FSCCKY
Trigger: GTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGA...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACCTCATGGAGTTCTATaGCAAGCTCCTGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAPHGVL*QAPALA
Trigger: AGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGG...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCCACAAGTTCCTAGCTTaGAGGCTCTGGCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: WATVSFWVTYTFSLRFPIHKFLA*RLWLSR
Trigger: CCTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTG...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCCTGGAGTACGCAGGCTaGCCACAAGTTCCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: WATVSFWVTYTFSLRFPILEYAG*PQVPSL
Trigger: CAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAG...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAAGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATCCTTTTTGCGGGATCTaGGAGATACTTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EASASTAGGPTHGFLLLHPFCGI*EILPWL
Trigger: GAGCCAGGGAAGTATCTCGCAGATCCCGCAAAAAGG...ATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCGAAAGGATTCGTCTATaGTCACTCCTGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAIERIRL*SLLKAV
Trigger: CACGGCCTTCAGGAGTGACCATAGACGAATCCTTTC...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGAGGAGCCTTAGTTCCTGGGTaGAATCTGTGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NLLPLVGQHPLIRILDGGALVPG*NLCPGP
Trigger: TGGACCTGGGCACAGATTCCACCCAGGAACTAAGGC...TCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp AGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCATCTTCTCCCTTTGGTaGGCCAGCATCCCCTCATAC +
Preference number: 4 (lower is better)
Translates to: RILSLQSSFTVTSLAFRGIFSLW*ASIPSY
Trigger: GTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGAT...GCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp ATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCCTCTCCTCAGCTCTCATaGCCAGGATCCTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: ILSLQSSFTVTSLAFRGSSPQLS*PGSSHC
Trigger: GCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGA...GGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSDMSSR*YRSSFR
Trigger: CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTC...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EEVDHVLLAWLLVLHEAISSEKN*SRSFSV
Trigger: CACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCT...GATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGGCGTGGAAGTGCGCTaGATCTCCTGCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVGVEVR*ISCSSE
Trigger: CTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCC...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTGCTACTGTCTCCTTCTaGGTGACATACACATTCTCA +
Preference number: 4 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGATVSF*VTYTFS
Trigger: TGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGC...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACATCTCCTTCAGCAGCTaGGCTACTGTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHISFSS*ATVSFW
Trigger: CCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGAT...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTGAGCGGACAAAGGGCTCACTCTaGCCCTCCTCATCCTCCATA +
Preference number: 4 (lower is better)
Translates to: FCTKGSLWPSSSSINSERTKGSL*PSSSSI
Trigger: TATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGT...CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACAGAGTCACTTCCTCATaGAGTTCTATGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHRVTSS*SSMPSS
Trigger: GGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCAGGCCCCCTCGCAGCTTaGGCAGAGTCACTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: WSSMPSSCFSCCKYSSFSGPLAA*AESLPH
Trigger: ATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCC...TGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCATCTGCTTGTCCAGGCTaGGGTCGATGGTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSSACPG*GRWSSG
Trigger: GCCTGATGACCATCGACCCCAGCCTGGACAAGCAGA...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGTCAGCACCCGCGGCCTaGGAAGCTGTGGTAGCGTAC +
Preference number: 4 (lower is better)
Translates to: VLLIHVLFPEFLHKGLTLSAPAA*EAVVAY
Trigger: GTACGCTACCACAGCTTCCCAGGCCGCGGGTGCTGA...CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGCAGGCGAGGCGGTCCAACCCATaGTTTTCTTCTTTTACATTC +
Preference number: 4 (lower is better)
Translates to: SSILMPESVVKPVPAPQARRSNP*FSSFTF
Trigger: GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCT...CGCCTGCGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
3UTR CAA 72 bp CCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTaGTCATCTCCTTCAGCAGCTGGGCTACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PWLVAPRSDCQH*SSPSAAGLLSP
Trigger: AGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCCAGAAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLQSSFTVTSLAFRGSRSVLRF*RSLRFW
Trigger: CCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCT...TCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR TCA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTTCCGGTAGTCATCTaGACAGGGTTTTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGALPVVI*TGFSIL
Trigger: CAAAATCGAAAACCCTGTTCAGATGACTACCGGAAG...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR TCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCAGGCATCTCGCTCACTaGGGTAGTGCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSRHLAH*GSAGTP
Trigger: AGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCT...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGCATTCAGGTCTGCGATaGGGATCTTACAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLHSGLR*GSYRHL
Trigger: GAGATGCCTGTAAGATCCTCATCGCAGACCTGAATG...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKSCAAA*GSHAPC
Trigger: GCAAGGAGCATGAGATCCTCATGCAGCTGCACATGA...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCAAGACTGCAGCCAGCACCTGCTCCTaGAGATCCTTGTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSFWVTYTFSLRFPIKTAASTCS*RSLLVF
Trigger: GAAGACCAACAAGGATCTTCAGGAGCAGGTGCTGGC...TGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp AGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCGCAGGAGGAGCTCCTTaGGTAGGTAGTTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RILSLQSSFTVTSLAFRGAGGAP*VGSFPV
Trigger: AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGC...GCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR GCA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGTTGGTCACCTCGCTCTaGAATGAAATCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQLVTSL*NEIFSS
Trigger: TGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAA...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAGGATCTCATGCTCCTTaGGAACCTCCTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSGSHAP*EPPRSW
Trigger: CCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCC...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATGGCTTCCCCATGCATGAGGATCTCATaGTCCTTGCGAACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FLFSTRPSNRRKAGMASPCMRIS*SLRTSS
Trigger: CGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCA...TGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTCAGCCACCACATCTTTaGACTTGGTCCAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSQPPHL*TWSSQA
Trigger: GGCCTGACTGGACCAAGTGCAAAGATGTGGTGGCTG...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR CCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGAGTTCCTCCAAGTACTaGGGCTTGGCAGTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKSSSKY*GLAVRK
Trigger: CTTTCGCACTGCCAAGCCCCAGTACTTGGAGGAACT...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCAGAACCTCCTCGTAGCTaGCTCTCAGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPEPPRS*LSGCPA
Trigger: AGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTC...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGAGCTCAGAGAAGAATTaGTCCCGTTCCTTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLSSEKN*SRSFSV
Trigger: CACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCT...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGCACGTCCTTCTTGCTTaGCTTCTTGTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: YRSSFRSAMRILQASRSLHVLLA*LLVLHE
Trigger: CTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTG...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGCCAGGCTGGGGTCGATaGTCATCAGGCCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLPGWGR*SSGPLA
Trigger: TGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGG...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGCAGGGTGTCCAGCTGTaGGCAAGGACATTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWQGVQL*ARTLAL
Trigger: CAGGGCCAATGTCCTTGCCCACAGCTGGACACCCTG...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAAGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTGCGAGATACTTCCCTaGCTCCTCCAAGTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EASASTAGGPTHGFLLLHCEILP*LLQVRL
Trigger: CAACCTTACTTGGAGGAGCCAGGGAAGTATCTCGCA...ATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCAGGTGCTGCCTGGGATaGAATCTGCCCATACTACTT +
Preference number: 4 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFRCCLG*NLPILL
Trigger: AAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCT...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR TCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCATTCAGGTCTGCGATaGGGATCTTACAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKHSGLR*GSYRHL
Trigger: GAGATGCCTGTAAGATCCTCATCGCAGACCTGAATG...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATGGCTTCCCCAGCAGGAGGAGCTCCTTaGGTAGGTAGTTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLFSTRPSNRRKAGMASPAGGAP*VGSFPV
Trigger: AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGC...TGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR GCA 90 bp GGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTAGCCCTCATGGAGTTCTATaGCAAGCTCCTGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GRCCLGWNLPILLPTSFSPHGVL*QAPALA
Trigger: AGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGG...GCTAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR GCA 90 bp GAAGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTCCTTGGTGTTTCTaGAGCCCCAGAATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: EASASTAGGPTHGFLLLHSPWCF*SPRIFH
Trigger: ATGGAAGATTCTGGGGCTGCAGAAACACCAAGGAGA...ATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp AATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGAGGAGAAAGGATTCGTCTATaGTCACTCCTGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NLLPLVGQHPLIRILDGGERIRL*SLLKAV
Trigger: CACGGCCTTCAGGAGTGACCATAGACGAATCCTTTC...TCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp CCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGAAGAAGCTTGCGATTCTaGGTGCTCTTGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PNLLPLVGQHPLIRILDGRSLRF*VLLSSV
Trigger: CACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCT...TCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp GGCATCCTTGAGGAGGTTGACCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACAGTTCTTCCTCAGTTTaGTCACCTCGCTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: GILEEVDHVLLAWLLVLHSSSSV*SPRSAM
Trigger: CATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACT...GTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTAGCAGAGTCACTTCCTCATaGAGTTCTATGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRCCLGWNLPILLPTSFSRVTSS*SSMPSS
Trigger: GGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT...GCTAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR TCA 90 bp CCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGACCTCATACGCATTCTTaGTGGAGGATAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: PNLLPLVGQHPLIRILDGPHTHS*WRIVMA
Trigger: AGCCATTACTATCCTCCATCAAGAATGCGTATGAGG...TCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR TCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGCGGCAGCGGGTGCCCTaGGAGTCAACCACTACAGCC +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKRQRVP*ESTTTA
Trigger: GGCTGTAGTGGTTGACTCTCAGGGCACCCGCTGCCG...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCCAGCTCATTCAGGTCTaGGATGAGGATCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSQLIQV*DEDLTG
Trigger: GCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTG...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGCTTTCCCATCAAGACTaGATAGAACTGACTCATAAC +
Preference number: 4 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQLSHQD*IELTHN
Trigger: GTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAG...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGATCAGCTCCTGGATTTaGTCTTCTGTCTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKISSWI*SSVLRG
Trigger: CCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGAT...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCGTAGTTGAGCAAGTCTaGATTGCTGCTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSVVEQV*IAAAGM
Trigger: CATCCCAGCAGCAGCAATGCAGACTTGCTCAACTAC...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRPSCLASCSPRGHQTEESSCFS*CKYSSF
Trigger: GAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCT...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGAGAAGCTTGCGATTCTaGGTGCTCTTGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSSALMARILSLQSSFTVRSLRF*VLLSSV
Trigger: CACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCT...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAGAAGCTTGCGATTCTaGGTGCTCTTGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPSCLASCSPRGHQTEERSLRF*VLLSSV
Trigger: CACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCT...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGCATCTGCCAGCGCTCTaGGCCCCCAGCCACCACATC +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKHLPAL*APSHHI
Trigger: GATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATG...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCCACGTCCTTCTTGCTTaGCTTCTTGTTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSHVLLA*LLVLHE
Trigger: CTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTG...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAGCCTCCATCAGCTCCTaGATTTGCTCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSASISS*ICSSVL
Trigger: CAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGC...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTACAAAGGGCTCACTCTaGCCCTCCTCATCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVTKGSL*PSSSSI
Trigger: TATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGT...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCATCTTCTCCCTTTGGTaGGCAGCGTCCTTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSIFSLW*AASFVS
Trigger: AGAAACGAAGGACGCTGCCCACCAAAGGGAGAAGAT...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR TCA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTCATCTTCTCTTTCTTaGGCAGGGAGATTTCATATT +
Preference number: 4 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHSSSLS*AGRFHI
Trigger: AATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGA...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CCAGAGCCCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTTCATCTTCTCTTTCTTaGGCAGGGAGATTTCATATT +
Preference number: 4 (lower is better)
Translates to: PEPESSPFGGPASPHTHSSSSLS*AGRFHI
Trigger: AATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGA...AGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR TCA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGGATGCTCCAGGAAATTaGAGAAGAAATCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: FSSALMARILSLQSSFTVDAPGN*RRNLGT
Trigger: CGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATC...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGGAGGTCCCACACGCCTaGTGTCAATCACCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLEVPHA*CQSPEA
Trigger: GGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTC...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGCTTTCCCATCAAGACTaGATAGAACTGACTCATAAC +
Preference number: 4 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRLSHQD*IELTHN
Trigger: GTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAG...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCTGTTCCCAGAGTTTTTaGACAAAGGGCTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSCSQSF*TKGSLW
Trigger: CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACA...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSSSCFS*CKYSSF
Trigger: GAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCT...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGTCTATGCCAAGCTCCTaGTTTAGCTGCTGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: FSSALMARILSLQSSFTVSMPSS*FSCCKY
Trigger: GTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGA...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTATCTTTTACATTCTCTTaGCGGTTGCTGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EGGAAWDGICPYYFLPVLSFTFS*RLLTEP
Trigger: AGGCTCTGTCAGCAACCGGCAAGAGAATGTAAAAGA...TAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGGCGGACGAGAAGCTGTaGTACCGCGACTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKADEKL*YRDCWQ
Trigger: CTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGC...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAAAGGATTCGTCTATaGTCACTCCTGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVERIRL*SLLKAV
Trigger: CACGGCCTTCAGGAGTGACCATAGACGAATCCTTTC...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGAGTTCCTCCAAGTACTaGGGCTTGGCAGTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: SFSSMYCSQSFCTKGSLWSSSKY*GLAVRK
Trigger: CTTTCGCACTGCCAAGCCCCAGTACTTGGAGGAACT...CCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568990.5
3UTR CAA 72 bp TCCCTTTGGTGGGCCAGCATCCCCTCATACGCATTCTaGATGGAGGATAGTAATGGCTTGTACGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLWWASIPSYAF*MEDSNGLYVLK
Trigger: CTTCAAAACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR TCA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCSVLRF*RSLRFW
Trigger: CCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCT...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAGATGCTCCAGGAAATTaGAGAAGAAATCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSDAPGN*RRNLGT
Trigger: CGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATC...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCTCTTTCTTGAGCAGGGAGATTTCATATTTCTCCTCAGCTCTCATGGCCAGGCAGCTCATTCAGGTCTaGGATGAGGATCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: FSFLSREISYFSSALMARQLIQV*DEDLTG
Trigger: GCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTG...CCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCAATCAGCTCCTGGATTTaGTCTTCTGTCTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WSSMPSSCFSCCKYSSFSISSWI*SSVLRG
Trigger: CCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGAT...TGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGAGTCTGCATTGCTGCTaGTGGGATGCCAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKSLHCC*WDASPL
Trigger: CAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACT...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GTCCTTCTCATCCATGTATTGTTCCCAGAGTTTTTGCACAAAGGGCTCACTCTGGTAGTTGAGCAAGTCTaGATTGCTGCTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: VLLIHVLFPEFLHKGLTLVVEQV*IAAAGM
Trigger: CATCCCAGCAGCAGCAATGCAGACTTGCTCAACTAC...CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCGCTACTGTCTCCTTCTaGGTGACATACACATTCTCA +
Preference number: 4 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSATVSF*VTYTFS
Trigger: TGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGC...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCCTGCATTGCTGCTGCTaGGATGCCAGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFLHCCC*DASPLP
Trigger: AGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAG...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTGTAGCAAAGGTGGACTaGGACCCGGCAGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSVAKVD*DPAAGA
Trigger: GGCACCCGCTGCCGGGTCCCAGTCCACCTTTGCTAC...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCCTGTGGTACCGCGACTaGTGGCAGGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFLWYRD*WQAMTH
Trigger: GTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAG...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTTGTTGAGTTCCATCTaGGTGCGGGTCAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLLLSSI*VRVRSC
Trigger: GCAAGACCTGACCCGCACGCAGATGGAACTCAACAA...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGGTGCTCATGTGCAGCTaGATGAGGATCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLVLMCS*MRISCS
Trigger: GGAGCATGAGATCCTCATGCAGCTGCACATGAGCAC...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCGCAAGTCTGCATTGCTaGTGCTGGGATGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFASLHC*CWDASP
Trigger: GGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGC...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTGCAGTGCGAAAGGGGTaGTGCTGGCAGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSAVRKG*CWQLQR
Trigger: ACGCTGGAGCTGCCAGCAGCACCCCTTTCGCACTGC...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGGAACCTCCTCGTAGCTaGCTCTCAGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKEPPRS*LSGCPA
Trigger: AGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTC...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCCTAGCTTGCAGGCTCTaGCTCTCGAGGTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFLACRL*LSRSHT
Trigger: CGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAG...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGCTGTCTCCTTCTGGGTaGCATACACATTCTCACTCC +
Preference number: 4 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLLSPSG*HTHSHS
Trigger: GGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAG...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGGCCAGCACCTGCTCCTaGAGATCCTTGTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKASTCS*RSLLVF
Trigger: GAAGACCAACAAGGATCTTCAGGAGCAGGTGCTGGC...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTGCTGGTCGCTGTTCTTaGCCTCAGCCAGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSAGRCS*PQPASA
Trigger: GGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGC...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTTTCGATTTTGCAAAATaGTCTGGCCACTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVFDFAK*SGHWCM
Trigger: CATACACCAGTGGCCAGACCATTTTGCAAAATCGAA...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CCA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTATTGAAGAAGAAATCTaGGAACGTCTCTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSIEEEI*ERLFLL
Trigger: GAGCAGAAAGAGACGTTCCCAGATTTCTTCTTCAAT...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCAGGCCATGGCATCACTaGGCCCAAAGCGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFRPWHH*AQSDAP
Trigger: TGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCT...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCAAATGGTCTGGCCACTaGTGTATGTGGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFKWSGH*CMWAMG
Trigger: CCCCATGGCCCACATACACCAGTGGCCAGACCATTT...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR TCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCAGTCCTCATTCACAGTaGCAAGCTTGGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFSPHSQ*QAWPSG
Trigger: CCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACT...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCTCATGTGCAGCTGCATaGGGATCTCATGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFSCAAA*GSHAPC
Trigger: GCAAGGAGCATGAGATCCTCATGCAGCTGCACATGA...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR TCA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGCTGTCTCCTTCTGGGTaGCATACACATTCTCACTCC +
Preference number: 4 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKLSPSG*HTHSHS
Trigger: GGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAG...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCGCCTTAGTTCCTGGGTaGAATCTGTGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFALVPG*NLCPGP
Trigger: TGGACCTGGGCACAGATTCCACCCAGGAACTAAGGC...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563363.5
ENST00000568990.5
CDS-3UTR GCA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTGTGCGCTGGATCTCCTaGAGCTCAGAGAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSVRWIS*SSEKNW
Trigger: CCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCAC...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CCA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTCTCCTCAGCTCTCATaGCCAGGATCCTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSSPQLS*PGSSHC
Trigger: GCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGA...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CCA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCAGTTCTTCCTCAGTTTaGTCACCTCGCTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFSSSSV*SPRSAM
Trigger: CATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACT...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR GCA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCTTGGTCACCTCGCTCTaGAATGAAATCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFLVTSL*NEIFSS
Trigger: TGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAA...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
3UTR CAA 72 bp ACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSLCNEIFSSFF*SMSFSKFIFSF
Trigger: GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR TCA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCTCATCTTCTCTTTCTTaGGCAGGGAGATTTCATATT +
Preference number: 4 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFSSSLS*AGRFHI
Trigger: AATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGA...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS CCA 90 bp GCCCTCATCCCTGCCAGCGCCTACCTCGACGCGGACGAGAAGCTGTaGTACCGCGACTGCTGGCAGGCCATGACCCACGGGCAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: ALIPASAYLDADEKL*YRDCWQAMTHGQAG
Trigger: GCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGGTAGGCGCTGGCAGGGATGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561654.5
ENST00000562633.5
ENST00000567852.5
CDS CCA 90 bp GCAGGCCATGACCCACGGGCAGGCGGGCAATCAGCACCCGCGGCCTaGGAAGCTGTGGTAGCGTACAGCCGGTCGCCATGGCGACCAGGC +
Preference number: 5 (lower is better)
Translates to: AGHDPRAGGQSAPAA*EAVVAYSRSPWRPG
Trigger: GCCTGGTCGCCATGGCGACCGGCTGTACGCTACCACAGCTTCCCAGGCCGCGGGTGCTGATTGCCCGCCTGCCCGTGGGTCATGGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000561639.6
ENST00000568990.5
CDS TCA 90 bp TCGACGCGGACGAGAAGCTGTGGTACCGCGACTGCTGGCAGGCCATaGCCCACGGGCAGGCGGGCAATCAGCACCCGCGGCCTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: STRTRSCGTATAGRP*PTGRRAISTRGLGS
Trigger: GCTTCCCAGGCCGCGGGTGCTGATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000563363.5
ENST00000565339.5
ENST00000568990.5
CDS CCA 90 bp AGCGCCTACCTCGACGCGGACGAGAAGCTGTGGTACCGCGACTGCTaGCAGGCCATGACCCACGGGCAGGCGGGCAATCAGCACCCGCGG +
Preference number: 5 (lower is better)
Translates to: SAYLDADEKLWYRDC*QAMTHGQAGNQHPR
Trigger: CCGCGGGTGCTGATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGGTAGGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567852.5
CDS CCA 90 bp GGCTGTAATCTCGACGCGGACGAGAAGCTGTGGTACCGCGACTGCTaGCAGGCCATGACCCACGGGCAGGCGGGCAATCAGCACCCGCGG +
Preference number: 5 (lower is better)
Translates to: GCNLDADEKLWYRDC*QAMTHGQAGNQHPR
Trigger: CCGCGGGTGCTGATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGATTACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000563363.5
ENST00000565148.5
ENST00000565339.5
ENST00000568990.5
CDS GCA 90 bp TCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGGCTaGCCCACAGGAAAGAGAGTGACAGGCCCTGACCCCTCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: SSGPLAAWAESLPHG*PTGKRVTGPDPSSP
Trigger: CGGAGAGGAGGGGTCAGGGCCTGTCACTCTCTTTCCTGTGGGGCAGCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS GCA 90 bp TGGCTTGGCCCGCAGACCTCCAGCCCGCCGAGCTGTAGACGTGGGTaGCTTTTTGCGGGATCTGCGAGATACTTCCCTGGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: WLGPQTSSPPSCRRG*LFAGSARYFPGSSK
Trigger: CTTGGAGGAGCCAGGGAAGTATCTCGCAGATCCCGCAAAAAGGCACCCACGTCTACAGCTCGGCGGGCTGGAGGTCTGCGGGCCAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CAA 90 bp GAGACTTGGGGAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTGTGCAGAGGCCTGGCTaGGCCCGCAGACCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ETWGGRCCLGWNLPILLPVQRPG*ARRPPA
Trigger: GGCTGGAGGTCTGCGGGCCAAGCCAGGCCTCTGCAC...AGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTCCCCAAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS TCA 90 bp GGACCCGGCAGCGGGTGCCCTGAGAGTCAACCACTACAGCCGATTTaGCCCCAGGTACCAGAACTGAGGCAGGGGGATGAACAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GPGSGCPESQPLQPI*PQVPELRQGDEQRP
Trigger: TGGCCTCTGTTCATCCCCCTGCCTCAGTTCTGGTACCTGGGGTCAAATCGGCTGTAGTGGTTGACTCTCAGGGCACCCGCTGCCGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415766.7
CDS-3UTR CAA 90 bp GGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGGGCAGAGTCACTTCCTCATGACCACATCTTTGCACTaGGTCCAGTCAGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: GVDGHQAPSQLGQSHFLMTTSLH*VQSGRG
Trigger: GCCGCGGCCTGACTGGACCAAGTGCAAAGATGTGGT...CATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS CCA 90 bp GGGAGACCCAGGGGCTTCAGGGGCCCAGCCTGTGGGACTCGCCTATaGATGAGGGTCACTCACAGTTCTATGCCAAGCTCCTGCTTTAGC +
Preference number: 5 (lower is better)
Translates to: GRPRGFRGPACGTRL*MRVTHSSMPSSCFS
Trigger: GCTAAAGCAGGAGCTTGGCATAGAACTGTGAGTGACCCTCATCCATAGGCGAGTCCCACAGGCTGGGCCCCTGAAGCCCCTGGGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS CCA 90 bp TGCATGGTGCACAGGGAGACCCAGGGGCTTCAGGGGCCCAGCCTGTaGGACTCGCCTATGGATGAGGGTCACTCACAGTTCTATGCCAAG +
Preference number: 5 (lower is better)
Translates to: CMVHRETQGLQGPSL*DSPMDEGHSQFYAK
Trigger: CTTGGCATAGAACTGTGAGTGACCCTCATCCATAGGCGAGTCCCACAGGCTGGGCCCCTGAAGCCCCTGGGTCTCCCTGTGCACCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS-3UTR CAA 90 bp GGCTCCAGAGCCCGAATCTTCTCCCTTTGGTGGGCCAGCATCCCCTCATACGCATCCAAGTACTGGGGCTaGGCAGTGCGAAAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: GSRARIFSLWWASIPSYASKYWG*AVRKGC
Trigger: GCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGA...TGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp GGGTTAGCAGGACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTCGTGCGGGTCAGGTCTaGCCGGGTCATCTTAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLAGLEYAGCPQVPSLQARAGQV*PGHLKS
Trigger: GCTCTTAAGATGACCCGGCAAGACCTGACCCGCACG...AGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTCCTGCTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGCCAGCACCGAGGCCCCCTCGCAGCTaGGGCAGAGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PESSILMPESVVKPVPAPRPPRS*GRVTSS
Trigger: TGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCT...CGGTGCTGGCACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CAA 90 bp TCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACGTCCACCAGCCCACAAGTTCCTAGCTaGCAGGCTCTGGCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: SFSRSSPEPISSRSTSTSPQVPS*QALALE
Trigger: CTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTGG...GCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCCGAATCTTCTCCCTTaGGTGGGCAGCGTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: AGRPGSCRCSLSACPGWGPNLLP*VGSVLR
Trigger: ACGAAGGACGCTGCCCACCAAAGGGAGAAGATTCGG...ACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR CAA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGTTCACAGTGACAAGCTaGGCCTTCAGGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGFTVTS*AFRGSR
Trigger: TCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAA...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CCTGGCGACTGGGCTAATGACATGTCCTCCCGCTGGTACCGCAGCTCATTCAGGCAGCTCAGAGAAGAATaGGTCCCGTTCCTTCAGCGT +
Preference number: 5 (lower is better)
Translates to: PGDWANDMSSRWYRSSFRQLREE*VPFLQR
Trigger: ACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTG...CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCATCAGGCCCCCTCGCAGCTTGACCACGTCCTTCTaGCTTGGCTTCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FTVCLSRLGSMVIRPPRSLTTSF*LGFLFS
Trigger: GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAA...GCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGGTCAGTGTTCACTGTCTGCTaGTCCAGGCTGGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: PGSCRCSLSACPGWGRWSVFTVC*SRLGSM
Trigger: CATCGACCCCAGCCTGGACAAGCAGACAGTGAACAC...TGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACCACAAGTTCCTAGCTaGCAGGCTCTGGCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: QGRSLSPAAAPNQSLPGAPQVPS*QALALE
Trigger: CTCGAGAGCCAGAGCCTGCAAGCTAGGAACTTGTGG...TGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAACCCTCACCTTTGCACTaGGTCCAGTCAGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: PRPSCLASCSPRGHQTEEPSPLH*VQSGRG
Trigger: GCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGG...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CAA 90 bp TACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCATCTCGCTCACTGCGGCTGCCCTCACCTTaGCACTTGGTCCAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: YRSSFRSAMRILQASRSLRLPSP*HLVQSG
Trigger: GCCTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCG...CAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CAA 90 bp TCTTGCCGGTTGCTGACAGAGCCTCAAGGGAATGCTGATGCCTCTTCCCTCACCCTCCTCCAAGTAAGGTaGGGTTTTCCCCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SCRLLTEPQGNADASSLTLLQVR*GFPLLA
Trigger: GGCCAGCAGGGGAAAACCCAACCTTACTTGGAGGAG...GGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS GCA 90 bp TTCTCCCTTTGGTGGGCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FSLWWAAALVPGWNL*PGPAGGAPCVGSFP
Trigger: TGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCCACCAAAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415766.7
ENST00000487120.5
ENST00000567852.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGCCGAATCTTCTCCCTTaGGTGGGCTGCAGCCTTAGT +
Preference number: 5 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQPNLLP*VGCSLS
Trigger: ACTAAGGCTGCAGCCCACCAAAGGGAGAAGATTCGG...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CAA 90 bp TCTTGCCGGTTGCTGACAGAGCCTCAAGGGAATGCTGATGCCTCTTCCCTCACCACATTCTCTTGCCGGTaGCTGACAGAGCCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: SCRLLTEPQGNADASSLTTFSCR*LTEPQG
Trigger: CCCTTGAGGCTCTGTCAGCAACCGGCAAGAGAATGT...GGTGAGGGAAGAGGCATCAGCATTCCCTTGAGGCTCTGTCAGCAACCGGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CAA 90 bp GAGGGAGGTGCTGCCTGGGATGGAATCTGCCCATACTACTTCCTACCAGTTTTAAGCCCCACCCTCTCCTaGGTGTTTCTGCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: EGGAAWDGICPYYFLPVLSPTLS*VFLQPQ
Trigger: CTGGGGCTGCAGAAACACCAAGGAGAGGGTGGGGCT...TAAAACTGGTAGGAAGTAGTATGGGCAGATTCCATCCCAGGCAGCACCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS GCA 90 bp TCCTCAGTTTGGTCACCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SSVWSPAALVPGWNL*PGPAGGAPCVGSFP
Trigger: TGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGGTGACCAAACTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562321.1
ENST00000565148.5
CDS-3UTR CAA 90 bp CGTGCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTATTCACAGTGACAAGCTaGGCCTTCAGGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RAHVQLHEDLMLLANLLVFTVTS*AFRGSR
Trigger: TCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAA...TACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGGTCGATGCCAGGATCCTCTCATaGCAGTCCTCATTCACAGTG +
Preference number: 5 (lower is better)
Translates to: EGLAHVGVHCLLVQAGVDARILS*QSSFTV
Trigger: CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGC...ATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGCCAGGATCCTCTCATaGCAGTCCTCATTCACAGTG +
Preference number: 5 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQARILS*QSSFTV
Trigger: CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGC...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGCGTGCGGGTCAGGTCTaGCCGGGTCATCTTAAGAGC +
Preference number: 5 (lower is better)
Translates to: FSSALMARILSLQSSFTVRAGQV*PGHLKS
Trigger: GCTCTTAAGATGACCCGGCAAGACCTGACCCGCACG...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGTTGGCCTTCATGTTGTaGAGTTCCATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: QTREEVFLPQQPRTNLFQLAFML*SSICVR
Trigger: CCGCACGCAGATGGAACTCAACAACATGAAGGCCAA...CTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GAGCTGGAAGGCCTGGCTCATGTAGGTGTTCACTGTCTGCTTGTCCAGGCTGGGTTCTTGCTTGGCTTCTaGTTCTCCACGAGGCCATCA +
Preference number: 5 (lower is better)
Translates to: ELEGLAHVGVHCLLVQAGFLLGF*FSTRPS
Trigger: TGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA...CCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CGTGCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTATTGAGCAAGTCTGCATaGCTGCTGCTGGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: RAHVQLHEDLMLLANLLVLSKSA*LLLGCQ
Trigger: CTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAA...TACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGCCCCCTCGCAGCTaGGGCAGAGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLLAWLLVLHEAIKPKKSRPPRS*GRVTSS
Trigger: TGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCT...GCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CAGATGGAGGGATCTGTGGGCAAACTGGGTCTCAGGTACCTGACTTTCCTCTGTGTGTTCACTGTCTGCTaGTCCAGGCTGGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: QMEGSVGKLGLRYLTFLCVFTVC*SRLGSM
Trigger: CATCGACCCCAGCCTGGACAAGCAGACAGTGAACAC...ACAGAGGAAAGTCAGGTACCTGAGACCCAGTTTGCCCACAGATCCCTCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CAA 90 bp TCTGCAGCCCCAGAATCTTCCATCCTGATGCCTGAGTCGGTAGTGAAGCCAGTGGACGTGGGTGCCTTTTaGCGGGATCTGCGAGATACT +
Preference number: 5 (lower is better)
Translates to: SAAPESSILMPESVVKPVDVGAF*RDLRDT
Trigger: AGTATCTCGCAGATCCCGCAAAAAGGCACCCACGTC...CACTGGCTTCACTACCGACTCAGGCATCAGGATGGAAGATTCTGGGGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS GCA 90 bp AGATCTCTCTGTAAGGCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RSLCKAAALVPGWNL*PGPAGGAPCVGSFP
Trigger: TGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCTTACAGAGAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000563363.5
CDS CCA 90 bp AATTCAGGCTTACCTGGCGACTGGGCTAATGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGGTCTGCGATGAGGATCTTACAGGCA +
Preference number: 5 (lower is better)
Translates to: NSGLPGDWANDMSSR*YRSSFRSAMRILQA
Trigger: TGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGTAAGCCTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562321.1
CDS-3UTR CAA 90 bp CCTGGCGACTGGGCTAATGACATGTCCTCCCGCTGGTACCGCAGCTCATTCAGGACAGGGTTTTCGATTTaGCAAAATGGTCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: PGDWANDMSSRWYRSSFRTGFSI*QNGLAT
Trigger: AGTGGCCAGACCATTTTGCAAAATCGAAAACCCTGT...CCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568990.5
CDS-3UTR CAA 90 bp GGGTTAGCAGGACTGGAGTACGCAGGCTGCCCACAAGTTCCTAGCTTGCAGGCTAAGTTCTTCCTCAGTTaGGTCACCTCGCTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: GLAGLEYAGCPQVPSLQAKFFLS*VTSLCN
Trigger: ATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACTT...AGCCTGCAAGCTAGGAACTTGTGGGCAGCCTGCGTACTCCAGTCCTGCTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACTTCTTGCTTGGCTTCTaGTTCTCCACGAGGCCATCA +
Preference number: 5 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHFLLGF*FSTRPS
Trigger: TGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AAGTTGGCCTTCATGTTGTTGAGTTCCATCTGCGTGCGGGTCAGGTCTTGCCGGGCATCCTTGAGGAGGTaGACCACGTCCTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KLAFMLLSSICVRVRSCRASLRR*TTSFLL
Trigger: AAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGC...CCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTAGGCCCCCTCGCAGCTaGGGCAGAGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVRPPRS*GRVTSS
Trigger: TGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCT...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS TCA 90 bp GCACGTAACGTCTTCACTGGGCTAAATCAGCCCGATTCTAACCATTaGCTCTGTGGTGCTGGAGCCCTAGATCAATGGTCAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARNVFTGLNQPDSNH*LCGAGALDQWSEAS
Trigger: GCTGGCCTCTGACCATTGATCTAGGGCTCCAGCACCACAGAGTCAATGGTTAGAATCGGGCTGATTTAGCCCAGTGAAGACGTTACGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561654.5
ENST00000562633.5
ENST00000567852.5
CDS-3UTR CAA 90 bp TGGTGGGCCAGCATCCCCTCATACGCATTCTTGATGGAGGATAGTAATGGCTTGTTCACAGTGACAAGCTaGGCCTTCAGGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WWASIPSYAFLMEDSNGLFTVTS*AFRGSR
Trigger: TCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAA...CAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp AGCCCAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTAAGTTGGCCTTCATGTaGTTGAGTTCCATCTGCGTG +
Preference number: 5 (lower is better)
Translates to: SPDQGRSLSPAAAPNQSLKLAFM*LSSICV
Trigger: CACGCAGATGGAACTCAACAACATGAAGGCCAACTT...AAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTCCAGGAGCACCTCTTGAGGACAGTGTaGAACTGCTCCATGGTTAGT +
Preference number: 5 (lower is better)
Translates to: REEVFLPQQPRTNLFQEHLLRTV*NCSMVS
Trigger: ACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAG...GTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AGCCCAGACCAGGGAAGAAGTCTTTCTCCCGCAGCAGCCCCGAACCAATCTCTTTTGTTCCCAGAGTTTTaGCACAAAGGGCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: SPDQGRSLSPAAAPNQSLLFPEF*HKGLTL
Trigger: CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAA...AAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCTTGTTCTCCACGAGGCCATCAAACCGAAGAAAAGCAGGGATGGCTTCCCCATTGGCCTTCATGTTGTaGAGTTCCATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: FLFSTRPSNRRKAGMASPLAFML*SSICVR
Trigger: CCGCACGCAGATGGAACTCAACAACATGAAGGCCAA...TGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCTCCTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGCCACGTCCTTCTTGCTaGGCTTCTTGTTCTCCACGA +
Preference number: 5 (lower is better)
Translates to: FSSALMARILSLQSSFTVPRPSC*ASCSPR
Trigger: TCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG...CACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCATCCTTCCAGGCATCCTaGAGGAGGTTGACCACGTCC +
Preference number: 5 (lower is better)
Translates to: VLCQAPALAAVSTRPSHPSFQAS*RRLTTS
Trigger: GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGA...TGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCAAGACTGCATTGAGCAAGTCTGCATaGCTGCTGCTGGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: VSFWVTYTFSLRFPIKTALSKSA*LLLGCQ
Trigger: CTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAA...TGCAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCCGATTCTGGGTGCTCTaGTCTTCTGTGAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: RILSLQSSFTVTSLAFRGRFWVL*SSVRKD
Trigger: ATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCG...GCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp GCTCCATGGTTAGTAGCCCCTCGTTCTGACTGTCAGCATTTGTCATCTCCTTCAGCATCCTTGAGGAGGTaGACCACGTCCTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: APWLVAPRSDCQHLSSPSASLRR*TTSFLL
Trigger: AAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGC...TGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GCTCATGTGCAGCTGCATGAGGATCTCATGCTCCTTGCGAACCTCCTCGTAGCTCGATGCTCCAGGAAATaGAAGAAGAAATCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: AHVQLHEDLMLLANLLVARCSRK*KKKSGN
Trigger: GTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCG...AGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp AGCCAGTGCCAGCACCGCAGGCGGTCCAACCCATGGTTTTCTTCTTTTACATTCTTCTTTTACATTCTCTaGCCGGTTGCTGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: SQCQHRRRSNPWFSSFTFFFYIL*PVADRA
Trigger: GGCTCTGTCAGCAACCGGCAAGAGAATGTAAAAGAA...GAATGTAAAAGAAGAAAACCATGGGTTGGACCGCCTGCGGTGCTGGCACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS-3UTR CAA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCGATTCTGGGTGCTCTaGTCTTCTGTGAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKRFWVL*SSVRKD
Trigger: ATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCG...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CCACGTCCTTCTTGCTTGGCTTCTTGTTCTCCACGAGGCCATCAAACCGAAGAATCTGACTGTCAGCATTaGTCATCTCCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PRPSCLASCSPRGHQTEESDCQH*SSPSAA
Trigger: AGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGA...TTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TGGGCTACTGTCTCCTTCTGGGTGACATACACATTCTCACTCCGCTTTCCCATCTCTGACTGTCAGCATTaGTCATCTCCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: WATVSFWVTYTFSLRFPISDCQH*SSPSAA
Trigger: AGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGA...GATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS TCA 90 bp TTCGTTTCTGAAGAAGCTTGCGATTCTGGGTGCTCTTGTCTTCTGTaGGAAAGGATTCGTCTATGGTCACTCCTGAAGGCCGTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: FVSEEACDSGCSCLL*ERIRLWSLLKAVAV
Trigger: TACAGCCACGGCCTTCAGGAGTGACCATAGACGAATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000388833.7
ENST00000415766.7
ENST00000431934.2
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000561654.5
ENST00000562321.1
ENST00000562633.5
ENST00000563363.5
ENST00000565148.5
ENST00000565339.5
ENST00000567852.5
ENST00000568990.5
ENST00000569504.5
CDS-3UTR CAA 90 bp ATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGCTTGGCCTTCAGGGGCTCCGAGGATAGTAATGGCTaGTACGTTTTGAAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: ILSLQSSFTVTSLAFRGSEDSNG*YVLKSS
Trigger: AGAGGACTTCAAAACGTACAAGCCATTACTATCCTC...GGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp CAGAGTTTTTGCACAAAGGGCTCACTCTGGCCCTCCTCATCCTCCATAAACAGTAAGTTCTTCCTCAGTTaGGTCACCTCGCTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QSFCTKGSLWPSSSSINSKFFLS*VTSLCN
Trigger: ATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACTT...ACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCAAGTTGGCCTTCATGTaGTTGAGTTCCATCTGCGTG +
Preference number: 5 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSKLAFM*LSSICV
Trigger: CACGCAGATGGAACTCAACAACATGAAGGCCAACTT...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGGTGTTCACTGTCTGCTaGTCCAGGCTGGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLVFTVC*SRLGSM
Trigger: CATCGACCCCAGCCTGGACAAGCAGACAGTGAACAC...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS GCA 90 bp TGGATGAGGGTCACTCACAGTTCTATGCCAAGCTCCTGCTTTAGCTaGTGTAAGTACTCGTCCTTCTCATCCATGTATTGTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: WMRVTHSSMPSSCFS*CKYSSFSSMYCSQS
Trigger: ACTCTGGGAACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTGTGAGTGACCCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS GCA 90 bp ACTCGCCTATGGATGAGGGTCACTCACAGTTCTATGCCAAGCTCCTaGTTTAGCTGCTGTAAGTACTCGTCCTTCTCATCCATGTATTGT +
Preference number: 5 (lower is better)
Translates to: TRLWMRVTHSSMPSS*FSCCKYSSFSSMYC
Trigger: ACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTGTGAGTGACCCTCATCCATAGGCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS-3UTR CAA 90 bp ATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTGAACTGCCGATTCTGGGTGCTCTaGTCTTCTGTGAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: ICSSVLRGKVLLRTVLNCRFWVL*SSVRKD
Trigger: ATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCG...GCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTCCGAATCTTCTCCCTTaGGTGGGCCAGCATCCCCTC +
Preference number: 5 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSPNLLP*VGQHPL
Trigger: GAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGG...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp CTCAGCTCTCATGGCCAGGATCCTCTCATTGCAGTCCTCATTCACAGTGACAAGTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSSHGQDPLIAVLIHSDKFSSFF*SMSFSK
Trigger: CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAA...CTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CTCCTGGATTTGCTCTTCTGTCTTGAGAGGGAAGGTACTCTTGAGGACAGTGTTCTTCTCATCCATGTATaGTTCCCAGAGTTTTTGCAC +
Preference number: 5 (lower is better)
Translates to: LLDLLFCLEREGTLEDSVLLIHV*FPEFLH
Trigger: GTGCAAAAACTCTGGGAACAATACATGGATGAGAAG...AACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GCCAGCATCCCCTCATACGCATTCTTGATGGAGGATAGTAATGGCTTGTACGTTAATGGCTTGTACGTTTaGAAGTCCTCTATGAAGAAC +
Preference number: 5 (lower is better)
Translates to: ASIPSYAFLMEDSNGLYVNGLYV*KSSMKN
Trigger: GTTCTTCATAGAGGACTTCAAAACGTACAAGCCATT...AACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp TCCTCATGGAGTTCTATGCCAAGCTCCTGCTTTAGCTGCTGTAAGTACTCGTCCTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSWSSMPSSCFSCCKYSSFSSFF*SMSFSK
Trigger: CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAA...GGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCTCCTTCCAGGCATCCTaGAGGAGGTTGACCACGTCC +
Preference number: 5 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFSFQAS*RRLTTS
Trigger: GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGA...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGACCACATCTCCAAAGTaGGCCTTCATGTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLTTSPK*AFMLLS
Trigger: ACTCAACAACATGAAGGCCAACTTTGGAGATGTGGT...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCCCACGTCCTTCTTGCTaGGCTTCTTGTTCTCCACGA +
Preference number: 5 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFPRPSC*ASCSPR
Trigger: TCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGTGG...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TTCCTCAGTTTGGTCACCTCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGCGATGCTCCAGGAAATaGAAGAAGAAATCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: FLSLVTSLCNEIFSSFFLRCSRK*KKKSGN
Trigger: GTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCG...CAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp CTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCTTGACCACGTCCTTCTaGCTTGGCTTCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LCNEIFSSFFLSMSFSKFLTTSF*LGFLFS
Trigger: GGAGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAA...GAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTGTTCCCAGAGTTTTaGCACAAAGGGCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKLFPEF*HKGLTL
Trigger: CAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAA...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp GAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTACCACTACAGCCGATTaGACCCCAGGTACCAGAACT +
Preference number: 5 (lower is better)
Translates to: EIFSSFFLSMSFSKFIFSTTTAD*TPGTRT
Trigger: AGTTCTGGTACCTGGGGTCAAATCGGCTGTAGTGGT...AGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466164.5
CDS-3UTR CAA 90 bp TCGCTCTGCAATGAAATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGACCACATCTCCAAAGTaGGCCTTCATGTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: SLCNEIFSSFFLSMSFSKTTSPK*AFMLLS
Trigger: ACTCAACAACATGAAGGCCAACTTTGGAGATGTGGT...CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCCCCTCATACGCATTCTaGATGGAGGATAGTAATGGC +
Preference number: 5 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFPSYAF*MEDSNG
Trigger: GCCATTACTATCCTCCATCAAGAATGCGTATGAGGG...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563363.5
CDS-3UTR CAA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCCTCTTGAGGACAGTGTaGAACTGCTCCATGGTTAGT +
Preference number: 5 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFLLRTV*NCSMVS
Trigger: ACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAG...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000568990.5
CDS-3UTR CAA 90 bp ATCTTCTCCTCATTCTTTTTGTCGATGAGTTTTAGCAAGTTCATCTTCTCTTTCTTCTCCTCATTCTTTTaGTCGATGAGTTTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: IFSSFFLSMSFSKFIFSFFSSFF*SMSFSK
Trigger: CTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAA...GAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000466164.5
ENST00000563363.5
ENST00000568990.5
CDS CCA 72 bp GACCCACGGGCAGGCGGGCAATCAGCACCCGCGGCCTaGGAAGCTGTGGTAGCGTACAGCCGGTCGCCATGG +
Preference number: 6 (lower is better)
Translates to: DPRAGGQSAPAA*EAVVAYSRSPW
Trigger: CCATGGCGACCGGCTGTACGCTACCACAGCTTCCCAGGCCGCGGGTGCTGATTGCCCGCCTGCCCGTGGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000568990.5
CDS CCA 72 bp CCTGCCAGCGCCTACCTCGACGCGGACGAGAAGCTGTaGTACCGCGACTGCTGGCAGGCCATGACCCACGGG +
Preference number: 6 (lower is better)
Translates to: PASAYLDADEKL*YRDCWQAMTHG
Trigger: CCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGGTAGGCGCTGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561654.5
ENST00000562633.5
ENST00000567852.5
CDS CCA 72 bp CTCGACGCGGACGAGAAGCTGTGGTACCGCGACTGCTaGCAGGCCATGACCCACGGGCAGGCGGGCAATCAG +
Preference number: 6 (lower is better)
Translates to: LDADEKLWYRDC*QAMTHGQAGNQ
Trigger: CTGATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000388833.7
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000563363.5
ENST00000565148.5
ENST00000565339.5
ENST00000567852.5
ENST00000568990.5
CDS GCA 72 bp TACCTCGACGCGGACGAGAAGCTGTGGTACCGCGACTaGTGGCAGGCCATGACCCACGGGCAGGCGGGCAAT +
Preference number: 6 (lower is better)
Translates to: YLDADEKLWYRD*WQAMTHGQAGN
Trigger: ATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561654.5
ENST00000562633.5
ENST00000567852.5
CDS CCA 72 bp GGCCGTGGCTGTAATCTCGACGCGGACGAGAAGCTGTaGTACCGCGACTGCTGGCAGGCCATGACCCACGGG +
Preference number: 6 (lower is better)
Translates to: GRGCNLDADEKL*YRDCWQAMTHG
Trigger: CCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGATTACAGCCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000563363.5
ENST00000565148.5
ENST00000565339.5
ENST00000568990.5
CDS CAA 90 bp ACCTTTGCCACACCTCTTCAGCCACAGTCAGTGCAGAGGCCTGGCTaGGCCCGCAGACCTCCAGCCCGCCGAGCTGTAGACGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: TFATPLQPQSVQRPG*ARRPPARRAVDVGA
Trigger: GGCACCCACGTCTACAGCTCGGCGGGCTGGAGGTCTGCGGGCCAAGCCAGGCCTCTGCACTGACTGTGGCTGAAGAGGTGTGGCAAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS GCA 72 bp AATCTCGACGCGGACGAGAAGCTGTGGTACCGCGACTaGTGGCAGGCCATGACCCACGGGCAGGCGGGCAAT +
Preference number: 6 (lower is better)
Translates to: NLDADEKLWYRD*WQAMTHGQAGN
Trigger: ATTGCCCGCCTGCCCGTGGGTCATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415766.7
ENST00000466164.5
ENST00000487120.5
ENST00000561639.6
ENST00000563363.5
ENST00000565148.5
ENST00000565339.5
ENST00000568990.5
CDS CCA 72 bp TCCGTGCCCCAGACTCCCAGGTGCCCTCCTCTGTGCTaGGCTGAGCAGTGGATGGTGCATGGTGCACAGGGA +
Preference number: 6 (lower is better)
Translates to: SVPQTPRCPPLC*AEQWMVHGAQG
Trigger: TCCCTGTGCACCATGCACCATCCACTGCTCAGCCCAGCACAGAGGAGGGCACCTGGGAGTCTGGGGCACGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS CAA 72 bp ACACCTCTTCAGCCACAGTCAGTGCAGAGGCCTGGCTaGGCCCGCAGACCTCCAGCCCGCCGAGCTGTAGAC +
Preference number: 6 (lower is better)
Translates to: TPLQPQSVQRPG*ARRPPARRAVD
Trigger: GTCTACAGCTCGGCGGGCTGGAGGTCTGCGGGCCAAGCCAGGCCTCTGCACTGACTGTGGCTGAAGAGGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS CCA 72 bp CACAGGGAGACCCAGGGGCTTCAGGGGCCCAGCCTGTaGGACTCGCCTATGGATGAGGGTCACTCACAGTTC +
Preference number: 6 (lower is better)
Translates to: HRETQGLQGPSL*DSPMDEGHSQF
Trigger: GAACTGTGAGTGACCCTCATCCATAGGCGAGTCCCACAGGCTGGGCCCCTGAAGCCCCTGGGTCTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS CAA 72 bp CCTCCAGCCCGCCGAGCTGTAGACGTGGGTGCCTTTTaGCGGGATCTGCGAGATACTTCCCTGGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPARRAVDVGAF*RDLRDTSLAPP
Trigger: TGGAGGAGCCAGGGAAGTATCTCGCAGATCCCGCAAAAAGGCACCCACGTCTACAGCTCGGCGGGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS CAA 90 bp GCCCGCAGACCTCCAGCCCGCCGAGCTGTAGACGTGGGTGCCTTTTaGCGGGATCTGCGAGATACTTCCCTGGCTCCTCCAAGTAAGGTT +
Preference number: 6 (lower is better)
Translates to: ARRPPARRAVDVGAF*RDLRDTSLAPPSKV
Trigger: AACCTTACTTGGAGGAGCCAGGGAAGTATCTCGCAGATCCCGCAAAAAGGCACCCACGTCTACAGCTCGGCGGGCTGGAGGTCTGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565558.1
CDS GCA 72 bp TGGTGGGCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGT +
Preference number: 6 (lower is better)
Translates to: WWAAALVPGWNL*PGPAGGAPCVG
Trigger: ACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415766.7
ENST00000487120.5
ENST00000567852.5
ENST00000568990.5
CDS CCA 72 bp AGGGGCTTCAGGGGCCCAGCCTGTGGGACTCGCCTATaGATGAGGGTCACTCACAGTTCTATGCCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: RGFRGPACGTRL*MRVTHSSMPSS
Trigger: GGAGCTTGGCATAGAACTGTGAGTGACCCTCATCCATAGGCGAGTCCCACAGGCTGGGCCCCTGAAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569504.5
CDS GCA 72 bp TCCTCCAAGTACTGGGGCTTGGCAGTGCGAAAGGGGTaGTGCTGGCAGCTCCAGCGTCCTTCGTTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SSKYWGLAVRKG*CWQLQRPSFLK
Trigger: CTTCAGAAACGAAGGACGCTGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415766.7
ENST00000487120.5
ENST00000562321.1
ENST00000563363.5
ENST00000567852.5
CDS GCA 72 bp TGGTCACCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGT +
Preference number: 6 (lower is better)
Translates to: WSPAALVPGWNL*PGPAGGAPCVG
Trigger: ACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGGTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562321.1
ENST00000565148.5
CDS TCA 72 bp AGCGGGTGCCCTGAGAGTCAACCACTACAGCCGATTTaGCCCCAGGTACCAGAACTGAGGCAGGGGGATGAA +
Preference number: 6 (lower is better)
Translates to: SGCPESQPLQPI*PQVPELRQGDE
Trigger: TTCATCCCCCTGCCTCAGTTCTGGTACCTGGGGTCAAATCGGCTGTAGTGGTTGACTCTCAGGGCACCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415766.7
ENST00000466164.5
CDS GCA 72 bp TGTAAGGCTGCAGCCTTAGTTCCTGGGTGGAATCTGTaGCCAGGTCCAGCAGGAGGAGCTCCTTGCGTAGGT +
Preference number: 6 (lower is better)
Translates to: CKAAALVPGWNL*PGPAGGAPCVG
Trigger: ACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCTTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000563363.5
CDS CCA 72 bp TGGTGTATGTGGGCCATGGGGACAGGTGCCCACCCATaGAGAACTGACCAGTCAGCGTCCTTCGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: WCMWAMGTGAHP*RTDQSASFVSE
Trigger: TTCAGAAACGAAGGACGCTGACTGGTCAGTTCTCCATGGGTGGGCACCTGTCCCCATGGCCCACATACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000565148.5
ENST00000568990.5
CDS CCA 72 bp TTGCAAAATGGTCTGGCCACTGGTGTATGTGGGCCATaGGGACAGGTGCCCACCCATGGAGAACTGACCAGT +
Preference number: 6 (lower is better)
Translates to: LQNGLATGVCGP*GQVPTHGELTS
Trigger: ACTGGTCAGTTCTCCATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000565148.5
ENST00000568990.5
CDS CCA 72 bp TTACCTGGCGACTGGGCTAATGACATGTCCTCCCGCTaGTACCGCAGCTCATTCAGGTCTGCGATGAGGATC +
Preference number: 6 (lower is better)
Translates to: LPGDWANDMSSR*YRSSFRSAMRI
Trigger: GATCCTCATCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562321.1
CDS TCA 72 bp AGGGGTGCTGCTGGCAGCTCCAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGGGTGCTCTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RGAAGSSSVLRF*RSLRFWVLLSS
Trigger: AGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCTGGAGCTGCCAGCAGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415766.7
ENST00000487120.5
ENST00000562321.1
ENST00000563363.5
ENST00000567852.5
CDS TCA 72 bp GTCTTCACTGGGCTAAATCAGCCCGATTCTAACCATTaGCTCTGTGGTGCTGGAGCCCTAGATCAATGGTCA +
Preference number: 6 (lower is better)
Translates to: VFTGLNQPDSNH*LCGAGALDQWS
Trigger: TGACCATTGATCTAGGGCTCCAGCACCACAGAGTCAATGGTTAGAATCGGGCTGATTTAGCCCAGTGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388833.7
ENST00000561654.5
ENST00000562321.1
ENST00000562633.5
ENST00000567852.5
CDS TCA 72 bp AATCTTCTCCCTTTGGTGGGCAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGGGTGCTCTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: NLLPLVGSVLRF*RSLRFWVLLSS
Trigger: AGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCTGCCCACCAAAGGGAGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466164.5
ENST00000561654.5
CDS TCA 72 bp TTCTTCCTCAGTTTGGTCACCAGCGTCCTTCGTTTCTaGAGAAGCTTGCGATTCTGGGTGCTCTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: FFLSLVTSVLRF*RSLRFWVLLSS
Trigger: AGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAAGGACGCTGGTGACCAAACTGAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431934.2
ENST00000565339.5
ENST00000569504.5
CDS CAA 90 bp GCCAGCATCCCCTCATACGCATTCTTGATGGAGGATAGTAATGGCTaGTACGTTTTGAAGTCCTCTATGAAGAACTCAAAGATCTCTCTG +
Preference number: 6 (lower is better)
Translates to: ASIPSYAFLMEDSNG*YVLKSSMKNSKISL
Trigger: CAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000563363.5
CDS CAA 72 bp CCCTCATACGCATTCTTGATGGAGGATAGTAATGGCTaGTACGTTTTGAAGTCCTCTATGAAGAACTCAAAG +
Preference number: 6 (lower is better)
Translates to: PSYAFLMEDSNG*YVLKSSMKNSK
Trigger: CTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388833.7
ENST00000561639.6
ENST00000563363.5