Pregenerated sensors for TSNAX (Homo sapiens)
Ensembl gene IDs: ENSG00000116918Ensembl transcript IDs: ENST00000366639.9, ENST00000413309.3, ENST00000475168.1, ENST00000476913.1, ENST00000602825.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTATCTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTaGTTGTCATGCTCAATTCAGTTTCACATCACAAGTAATCATCTA | + |
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Preference number: 1 (lower is better) Translates to: PVSRFSKLTKPTGNV*LSCSIQFHITSNHL Trigger: TAGATGATTACTTGTGATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAGATACTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATGGTCAGGCTGGTCTTaGTCTCTTGACCTCGTGATC | + |
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Preference number: 2 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQWSGWS*SLDLVI Trigger: GATCACGAGGTCAAGAGATCAAGACCAGCCTGACCA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCGGAGAAAGCAACATCTaGGCACCTGTCAAATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIGESNI*APVKFL Trigger: TAAAAATTTGACAGGTGCCCAGATGTTGCTTTCTCC...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCCTATTTTTGAGGCTTaGCACGATATTAACAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIPIFEA*HDINKK Trigger: TTTCTTGTTAATATCGTGCCAAGCCTCAAAAATAGG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAAGGAATAAGCCTATTTTaGAGGCTTGGCACGATATTA | + |
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Preference number: 3 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQGISLF*RLGTIL Trigger: TAATATCGTGCCAAGCCTCAAAAATAGGCTTATTCC...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR CCA 72 bp | ATTCTTGTTCCATGGAATAAGCCTATTTTTGAGGCTTaGCACGATATTAACAAGAAATTTAAACAGGACGCT | + |
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Preference number: 3 (lower is better) Translates to: ILVPWNKPIFEA*HDINKKFKQDA Trigger: AGCGTCCTGTTTAAATTTCTTGTTAATATCGTGCCAAGCCTCAAAAATAGGCTTATTCCATGGAACAAGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR GCA 72 bp | AAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATaGTCAATTCAGTTTCACATCACAAGTAATCATCTA | + |
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Preference number: 3 (lower is better) Translates to: KLTKPTGNVWLS*SIQFHITSNHL Trigger: TAGATGATTACTTGTGATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCTGGAGCAAGAGGAGTaGGCGAGGTACAGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHILEQEE*ARYRPR Trigger: CCTCGGCCTGTACCTCGCGCACTCCTCTTGCTCCAG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACGTCACAGCCTACGGTaGGACGAGCGGAGACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQRHSLR*DERRLK Trigger: CTTCAGTCTCCGCTCGTCTCACCGTAGGCTGTGACG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCTGGTCAGGCTGGTCTTaGTCTCTTGACCTCGTGATC | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIWSGWS*SLDLVI Trigger: GATCACGAGGTCAAGAGATCAAGACCAGCCTGACCA...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACAGGCCGAGGGAACCTaGGAAAACAGCCTGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQQAEGT*ENSLQK Trigger: TTTCTGCAGGCTGTTTTCCCAGGTTCCCTCGGCCTG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCGGTAATCGACAGGTGTaGCTCTCAGTCTCCAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIGNRQV*LSVSKY Trigger: GTACTTGGAGACTGAGAGTCACACCTGTCGATTACC...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATGCAGAAAAACGCTTTaGAGCCGGGCCGACTACAAC | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQCRKTL*SRADYN Trigger: GTTGTAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACATGCTTCCTTTTCCTaGACCCTCCTGATCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQHASFS*TLLILL Trigger: AAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQMARWN*CISSPD Trigger: ATCAGGGGAAGATATGCATCAGTTCCATCGAGCCAT...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCTGATCCTTCTTTGTTaGTCATGTCGTCACAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHILILLC*SCRHSL Trigger: TAGGCTGTGACGACATGAGCAACAAAGAAGGATCAG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCTCCAAGTACCAAACTaGTTATCCTGTGCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHILQVPN*LSCASE Trigger: CTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCAAACTGCTTATCCTGTaGATCAGAGGAGGGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIKLLIL*IRGGSF Trigger: AAAACTCCCTCCTCTGATGCACAGGATAAGCAGTTT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCAGCTCTTGGGCTACCTaGAATATCTTTTGTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHISSWAT*NIFCLT Trigger: TGTCAGACAAAAGATATTCCAGGTAGCCCAAGAGCT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATCCCCTGATAGCTCTTaGGCTACCTGGAATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQSPDSS*ATWNIF Trigger: AAAGATATTCCAGGTAGCCCAAGAGCTATCAGGGGA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAAGCATCAAGTTCCTGCTaGAATGATTTAAAGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQASSSC*NDLKAN Trigger: GTTGGCCTTTAAATCATTTCAGCAGGAACTTGATGC...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR TCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCAGTGTTGCCAATGAATaGAAACCCATCATAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHISVANE*KPIINL Trigger: CAGGTTTATGATGGGTTTTCATTCATTGGCAACACT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATGTGGGAAATTGTCATaGTTCCTTTTCCTGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQCGKLS*FLFLNP Trigger: AGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACTCTCATATTTGTCATaGCTTGCATCAAGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQLSYLS*LASSSC Trigger: GCAGGAACTTGATGCAAGGCATGACAAATATGAGAG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACCAACTGGAAATGTCTaGTTGTCATGCTCAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQPTGNV*LSCSIQ Trigger: CTGAATTGAGCATGACAACCAGACATTTCCAGTTGG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCAATGTCTGGTTGTCATaGTCAATTCAGTTTCACATC | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHINVWLS*SIQFHI Trigger: GATGTGAAACTGAATTGAGCATGACAACCAGACATT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCTCTTCTTTGGTTATGTaGGAAATTGTCATGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHISSLVM*EIVMLP Trigger: AGGAAGCATGACAATTTCCCACATAACCAAAGAAGA...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCTTCCCTTCTCTTCTTTaGTTATGTGGGAAATTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIFPSLL*LCGKLS Trigger: TGACAATTTCCCACATAACCAAAGAAGAGAAGGGAA...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCGCACTTGTAATCCTATaGAGGAGAAAAATTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIALVIL*RRKIVL Trigger: AAGGACAATTTTTCTCCTCCATAGGATTACAAGTGC...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAAGGAGAAAGCAACATCTaGGCACCTGTCAAATTTTTA | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQGESNI*APVKFL Trigger: TAAAAATTTGACAGGTGCCCAGATGTTGCTTTCTCC...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCACTTACAAAACCAACTaGAAATGTCTGGTTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: LTKPTGNVWLSCSIQFHITYKTN*KCLVVM Trigger: CATGACAACCAGACATTTCCAGTTGGTTTTGTAAGT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR GCA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAAATATTTGTCATGCCTTaGATCAAGTTCCTGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQIFVMP*IKFLLK Trigger: TTTCAGCAGGAACTTGATGCAAGGCATGACAAATAT...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| 3UTR CAA 72 bp | TTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTaGTCATGCTCAATTCAGTTTCACATCACAAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: FSKLTKPTGNVW*SCSIQFHITSN Trigger: ATTACTTGTGATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS CCA 90 bp | CGTACTTCCGGCCTGCGTCCGGAGGGGAGGGGAGGCCGTCGCCGCTaGCTCCGCCCACCGCGTGGTCCAAGGACCACCACCCGCCACCGC | + |
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Preference number: 5 (lower is better) Translates to: RTSGLRPEGRGGRRR*LRPPRGPRTTTRHR Trigger: GCGGTGGCGGGTGGTGGTCCTTGGACCACGCGGTGGGCGGAGCCAGCGGCGACGGCCTCCCCTCCCCTCCGGACGCAGGCCGGAAGTACG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS CCA 90 bp | TCCGGAGGGGAGGGGAGGCCGTCGCCGCTGGCTCCGCCCACCGCGTaGTCCAAGGACCACCACCCGCCACCGCCGCGCGAGCGTACTATT | + |
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Preference number: 5 (lower is better) Translates to: SGGEGRPSPLAPPTA*SKDHHPPPPRERTI Trigger: AATAGTACGCTCGCGCGGCGGTGGCGGGTGGTGGTCCTTGGACCACGCGGTGGGCGGAGCCAGCGGCGACGGCCTCCCCTCCCCTCCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS CCA 90 bp | CAGCCTGCAGAAAAACGCTTTGCAGCCGGGCCGACTACAACGCAGTaGCCGGAAGTCTCCTCTCACGTACTTCCGGCCTGCGTCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QPAEKRFAAGPTTTQ*PEVSSHVLPACVRR Trigger: CCTCCGGACGCAGGCCGGAAGTACGTGAGAGGAGACTTCCGGCCACTGCGTTGTAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCAGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS GCA 90 bp | GAGGAGTGCGCGAGGTACAGGCCGAGGGAACCTGGGAAAACAGCCTaGAGAAAAACGCTTTGCAGCCGGGCCGACTACAACGCAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: EECARYRPREPGKTA*RKTLCSRADYNAVA Trigger: GGCCACTGCGTTGTAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCAGGCTGTTTTCCCAGGTTCCCTCGGCCTGTACCTCGCGCACTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS CCA 90 bp | GGACCTGGAGCAAGAGGAGTGCGCGAGGTACAGGCCGAGGGAACCTaGGAAAACAGCCTGCAGAAAAACGCTTTGCAGCCGGGCCGACTA | + |
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Preference number: 5 (lower is better) Translates to: GPGARGVREVQAEGT*ENSLQKNALQPGRL Trigger: TAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCAGGCTGTTTTCCCAGGTTCCCTCGGCCTGTACCTCGCGCACTCCTCTTGCTCCAGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS TCA 90 bp | TTTGTTGCTCATGTCGTCACAGCCTACGGTGAGACGAGCGGAGACTaGAGGACCTGGAGCAAGAGGAGTGCGCGAGGTACAGGCCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: FVAHVVTAYGETSGD*RTWSKRSARGTGRG Trigger: CCCTCGGCCTGTACCTCGCGCACTCCTCTTGCTCCAGGTCCTTCAGTCTCCGCTCGTCTCACCGTAGGCTGTGACGACATGAGCAACAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS TCA 90 bp | ACCCTCCTGATCCTTCTTTGTTGCTCATGTCGTCACAGCCTACGGTaGGACGAGCGGAGACTGAAGGACCTGGAGCAAGAGGAGTGCGCG | + |
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Preference number: 5 (lower is better) Translates to: TLLILLCCSCRHSLR*DERRLKDLEQEECA Trigger: CGCGCACTCCTCTTGCTCCAGGTCCTTCAGTCTCCGCTCGTCTCACCGTAGGCTGTGACGACATGAGCAACAAAGAAGGATCAGGAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS TCA 90 bp | ATTCTCCAGTTAAGTCAGCCACTCCCAGAAGGTAATCGACAGGTGTaGCTCTCAGTCTCCAAGTACCAAACTGCTTATCCTGTGCATCAG | + |
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Preference number: 5 (lower is better) Translates to: ILQLSQPLPEGNRQV*LSVSKYQTAYPVHQ Trigger: CTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTGAGAGTCACACCTGTCGATTACCTTCTGGGAGTGGCTGACTTAACTGGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366639.9 ENST00000475168.1 |
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| CDS GCA 90 bp | CATCATTCAGATATCATTCTGCTCAAGGACTGCTTAAGAATCACGTaGCTCCCTCCTCCCTTACTCTCCATTCCTTACCACGCTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: HHSDIILLKDCLRIT*LPPPLLSIPYHASL Trigger: CAGTGAAGCGTGGTAAGGAATGGAGAGTAAGGGAGGAGGGAGGCACGTGATTCTTAAGCAGTCCTTGAGCAGAATGATATCTGAATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS GCA 90 bp | AATACCTTACTGTACCGGAACTACAAAATAGTCTCTTGTCTGGTCTaGGTCTGCCCACCTTGCCTTTCTGTAGCTGCCAGAGTGACATTT | + |
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Preference number: 5 (lower is better) Translates to: NTLLYRNYKIVSCLV*VCPPCLSVAARVTF Trigger: AAATGTCACTCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCGGTACAGTAAGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS TCA 90 bp | CCTGAAACAAACCTAGACTTACCTGTAGTAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGATAGCTCTTGGGCTACCTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: PETNLDLPVVMARWN*CISSPDSSWATWNI Trigger: GATATTCCAGGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATTACTACAGGTAAGTCTAGGTTTGTTTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476913.1 |
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| CDS TCA 90 bp | CTTCTCTCACATCTTTCTCTACCTGTAGTAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGATAGCTCTTGGGCTACCTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: LLSHLSLPVVMARWN*CISSPDSSWATWNI Trigger: GATATTCCAGGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATTACTACAGGTAGAGAAAGATGTGAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602825.5 |
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| CDS GCA 90 bp | TTACTGTACCGGAACTACAAAATAGTCTCTTGTCTGGTCTGCGTCTaGCCACCTTGCCTTTCTGTAGCTGCCAGAGTGACATTTCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LLYRNYKIVSCLVCV*PPCLSVAARVTFLK Trigger: TTTTAGAAATGTCACTCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCGGTACAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCTGCAGAAAAACGCTTaGCAGCCGGGCCGACTACAA | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHILQKNA*QPGRLQ Trigger: TTGTAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCAG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS GCA 90 bp | CGGAACTACAAAATAGTCTCTTGTCTGGTCTGCGTCTGCCCACCTTaGCTTTCTGTAGCTGCCAGAGTGACATTTCTAAAATATACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RNYKIVSCLVCVCPP*LSVAARVTFLKYTL Trigger: TAAAGTATATTTTAGAAATGTCACTCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCCTGATCCTTCTTTGTaGCTCATGTCGTCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIPDPSL*LMSSQP Trigger: AGGCTGTGACGACATGAGCAACAAAGAAGGATCAGG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS GCA 90 bp | TTAACATCCTTCCCTTCTCTTCTTTGGTTATGTGGGAAATTGTCATaGTTCCTTTTCCTGAACCCTCCTGATCCTTCTTTGTTGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LTSFPSLLWLCGKLS*FLFLNPPDPSLLLM Trigger: CATGAGCAACAAAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACATAACCAAAGAAGAGAAGGGAAGGATGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS-3UTR CAA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAACCTCCTGATCCTTCTTaGTTGCTCATGTCGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQPPDPS*LLMSSQ Trigger: CTGTGACGACATGAGCAACAAAGAAGGATCAGGAGG...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCTGGTTATGTGGGAAATaGTCATGCTTCCTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIWLCGK*SCFLFL Trigger: CAGGAAAAGGAAGCATGACAATTTCCCACATAACCA...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCTTCCCTTCTCTTCTTaGGTTATGTGGGAAATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHILPFSS*VMWEIV Trigger: GACAATTTCCCACATAACCAAAGAAGAGAAGGGAAG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCATATTTGTCATGCCTaGCATCAAGTTCCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIHICHA*HQVPAE Trigger: TTCAGCAGGAACTTGATGCAAGGCATGACAAATATG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCAAGCATTCTCCACTTaGGCCAAACTTTGTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIQAFST*AKLCFK Trigger: CTTGAAACAAAGTTTGGCCAAAGTGGAGAATGCTTG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCACAAGTCTCTCATATTaGTCATGCCTTGCATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHITSLSY*SCLASS Trigger: ACTTGATGCAAGGCATGACAAATATGAGAGACTTGT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCCACTTTGGCCAAACTTaGTTTCAAGGTATACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHIHFGQT*FQGIQL Trigger: AAGCTGTATACCTTGAAACAAAGTTTGGCCAAAGTG...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATTCAGTTTCACATCACTGGAAATGTCTGGTaGTCATGCTCAATTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTKPTGNVWLSCSIQFHITGNVW*SCSIQF Trigger: AAACTGAATTGAGCATGACAACCAGACATTTCCAGT...GATGTGAAACTGAATTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS-3UTR CAA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATGTTTTGATGAAGTGTaGAAAAGAGACAGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQCFDEV*KRDSFH Trigger: GTGGAAGCTGTCTCTTTTCAACACTTCATCAAAACA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS CCA 90 bp | TTACGTTTAACAAACTCCAAACTCTTTATGAAGCCTTACATTACTTaGTCCCTTGCAATACCCCCAAAAAGAACAAATCAACAAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LRLTNSKLFMKPYIT*SLAIPPKRTNQQTI Trigger: GATGGTTTGTTGATTTGTTCTTTTTGGGGGTATTGCAAGGGACCAAGTAATGTAAGGCTTCATAAAGAGTTTGGAGTTTGTTAAACGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS-3UTR CAA 90 bp | CTAGATTCTCAAAACTTACAAAACCAACTGGAAATGTCTGGTTGTCATGCTCAATACCTGGAATATCTTTaGTCTGACACCATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSQNLQNQLEMSGCHAQYLEYL*SDTIQF Trigger: AAATTGGATGGTGTCAGACAAAAGATATTCCAGGTA...TTGAGCATGACAACCAGACATTTCCAGTTGGTTTTGTAAGTTTTGAGAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS CCA 72 bp | GAGGGGAGGCCGTCGCCGCTGGCTCCGCCCACCGCGTaGTCCAAGGACCACCACCCGCCACCGCCGCGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGRPSPLAPPTA*SKDHHPPPPRE Trigger: CTCGCGCGGCGGTGGCGGGTGGTGGTCCTTGGACCACGCGGTGGGCGGAGCCAGCGGCGACGGCCTCCCCTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS CCA 72 bp | GGCCTGCGTCCGGAGGGGAGGGGAGGCCGTCGCCGCTaGCTCCGCCCACCGCGTGGTCCAAGGACCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLRPEGRGGRRR*LRPPRGPRTTT Trigger: GGTGGTGGTCCTTGGACCACGCGGTGGGCGGAGCCAGCGGCGACGGCCTCCCCTCCCCTCCGGACGCAGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS CCA 72 bp | GAAAAACGCTTTGCAGCCGGGCCGACTACAACGCAGTaGCCGGAAGTCTCCTCTCACGTACTTCCGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EKRFAAGPTTTQ*PEVSSHVLPAC Trigger: GCAGGCCGGAAGTACGTGAGAGGAGACTTCCGGCCACTGCGTTGTAGTCGGCCCGGCTGCAAAGCGTTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS TCA 72 bp | ATCCTTCTTTGTTGCTCATGTCGTCACAGCCTACGGTaGGACGAGCGGAGACTGAAGGACCTGGAGCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILLCCSCRHSLR*DERRLKDLEQE Trigger: CTCTTGCTCCAGGTCCTTCAGTCTCCGCTCGTCTCACCGTAGGCTGTGACGACATGAGCAACAAAGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS GCA 72 bp | CGGAACTACAAAATAGTCTCTTGTCTGGTCTGCGTCTaGCCACCTTGCCTTTCTGTAGCTGCCAGAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RNYKIVSCLVCV*PPCLSVAARVT Trigger: TGTCACTCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS GCA 72 bp | CTGTACCGGAACTACAAAATAGTCTCTTGTCTGGTCTaGGTCTGCCCACCTTGCCTTTCTGTAGCTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LYRNYKIVSCLV*VCPPCLSVAAR Trigger: TCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCGGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS GCA 72 bp | GACTCTCAGTCTCCAAGTACCAAACTGCTTATCCTGTaGATCAGAGGAGGGCTTCTATCCTCCAGTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DSQSPSTKLLIL*IRGGLLSSSLR Trigger: TCTGAGACTGGAGGATAGAAGCCCTCCTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS GCA 72 bp | TCGACAGGTGTGACTCTCAGTCTCCAAGTACCAAACTaGTTATCCTGTGCATCAGAGGAGGGCTTCTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: STGVTLSLQVPN*LSCASEEGFYP Trigger: AGGATAGAAGCCCTCCTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTGAGAGTCACACCTGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS CAA 90 bp | GCTTCTATCCTCCAGTCTCAGATGATGAGTTGTCCCTCCTCTTGTTaGAGGTTAACTCTTCCAAATGACCTTGACCCATCTCCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ASILQSQMMSCPSSC*RLTLPNDLDPSPPT Trigger: GGTGGGAGGAGATGGGTCAAGGTCATTTGGAAGAGTTAACCTCAAACAAGAGGAGGGACAACTCATCATCTGAGACTGGAGGATAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS TCA 72 bp | TATTCCTGTAGTCCTGTAGTAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGATAGCTCTTGGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: YSCSPVVMARWN*CISSPDSSWAT Trigger: GGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATTACTACAGGACTACAGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000475168.1 |
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| CDS TCA 72 bp | TTAAGTCAGCCACTCCCAGAAGGTAATCGACAGGTGTaGCTCTCAGTCTCCAAGTACCAAACTGCTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSQPLPEGNRQV*LSVSKYQTAYP Trigger: AGGATAAGCAGTTTGGTACTTGGAGACTGAGAGTCACACCTGTCGATTACCTTCTGGGAGTGGCTGACTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366639.9 ENST00000475168.1 |
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| CDS TCA 72 bp | AACCTAGACTTACCTGTAGTAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGATAGCTCTTGGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: NLDLPVVMARWN*CISSPDSSWAT Trigger: GGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATTACTACAGGTAAGTCTAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476913.1 |
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| CDS TCA 72 bp | CATCTTTCTCTACCTGTAGTAATGGCTCGATGGAACTaGTGCATATCTTCCCCTGATAGCTCTTGGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: HLSLPVVMARWN*CISSPDSSWAT Trigger: GGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATTACTACAGGTAGAGAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602825.5 |
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| CDS GCA 72 bp | TCGACAGGTGTGACTCTCAGTCTCCAAGTACCAAACTaGTTATCCTGTGCATCAGAGGAGGGAGTTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: STGVTLSLQVPN*LSCASEEGVLF Trigger: AAATAAAACTCCCTCCTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTGAGAGTCACACCTGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366639.9 |
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| CDS CAA 90 bp | CCGGAACTACAAAATAGTCTCTTGTCTGGTCTGCGTCTGCCCACCTaGCCTTTCTGTAGCTGCCAGAGTGACATTTCTAAAATATACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PELQNSLLSGLRLPT*PFCSCQSDISKIYF Trigger: AAAGTATATTTTAGAAATGTCACTCTGGCAGCTACAGAAAGGCAAGGTGGGCAGACGCAGACCAGACAAGAGACTATTTTGTAGTTCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS TCA 72 bp | TTTGGTTATGTGGGAAATTGTCATGCTTCCTTTTCCTaGACCCTCCTGATCCTTCTTTGTTGCTCATGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FGYVGNCHASFS*TLLILLCCSCR Trigger: ACGACATGAGCAACAAAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACATAACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS CAA 90 bp | GATGAATTAACATCCTTCCCTTCTCTTCTTTGGTTATGTGGGAAATaGTCATGCTTCCTTTTCCTGAACCCTCCTGATCCTTCTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DELTSFPSLLWLCGK*SCFLFLNPPDPSLL Trigger: CAACAAAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACATAACCAAAGAAGAGAAGGGAAGGATGTTAATTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000366639.9 ENST00000413309.3 ENST00000602825.5 |
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| CDS CAA 90 bp | TCTGACTTTCAAGGCATAACAAGCATTCTCCACTTTGGCCAAACTTaGTTTCAAGGTATACAGCTTCTTAGAAACCTCGTAAGGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDFQGITSILHFGQT*FQGIQLLRNLVRSS Trigger: ACTGGACCTTACGAGGTTTCTAAGAAGCTGTATACCTTGAAACAAAGTTTGGCCAAAGTGGAGAATGCTTGTTATGCCTTGAAAGTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366639.9 ENST00000475168.1 |
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| CDS CAA 72 bp | CAAGGCATAACAAGCATTCTCCACTTTGGCCAAACTTaGTTTCAAGGTATACAGCTTCTTAGAAACCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: QGITSILHFGQT*FQGIQLLRNLV Trigger: TACGAGGTTTCTAAGAAGCTGTATACCTTGAAACAAAGTTTGGCCAAAGTGGAGAATGCTTGTTATGCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366639.9 ENST00000475168.1 |
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| CDS TCA 72 bp | GATTCAGTCAATATATCTTCCATATCAGGAGCACTATaGTCAAGATATTGGGAACTTGTAATCCTATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSVNISSISGAL*SRYWELVILWR Trigger: CCTCCATAGGATTACAAGTTCCCAATATCTTGATCATAGTGCTCCTGATATGGAAGATATATTGACTGAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413309.3 |
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| CDS GCA 72 bp | CAAACTCTTTATGAAGCCTTACATTACTTGGTCCCTTaGAATACCCCCAAAAAGAACAAATCAACAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: QTLYEALHYLVP*NTPKKNKSTNH Trigger: ATGGTTTGTTGATTTGTTCTTTTTGGGGGTATTGCAAGGGACCAAGTAATGTAAGGCTTCATAAAGAGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS CCA 72 bp | ACAAACTCCAAACTCTTTATGAAGCCTTACATTACTTaGTCCCTTGCAATACCCCCAAAAAGAACAAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TNSKLFMKPYIT*SLAIPPKRTNQ Trigger: TTGATTTGTTCTTTTTGGGGGTATTGCAAGGGACCAAGTAATGTAAGGCTTCATAAAGAGTTTGGAGTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS CAA 72 bp | AACAAACTCCAAACTCTTTATGAAGCCTTACATTACTaGGTCCCTTGCAATACCCCCAAAAAGAACAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: NKLQTLYEALHY*VPCNTPKKNKS Trigger: TGATTTGTTCTTTTTGGGGGTATTGCAAGGGACCAAGTAATGTAAGGCTTCATAAAGAGTTTGGAGTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS CAA 90 bp | ATTACGTTTAACAAACTCCAAACTCTTTATGAAGCCTTACATTACTaGGTCCCTTGCAATACCCCCAAAAAGAACAAATCAACAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: ITFNKLQTLYEALHY*VPCNTPKKNKSTNH Trigger: ATGGTTTGTTGATTTGTTCTTTTTGGGGGTATTGCAAGGGACCAAGTAATGTAAGGCTTCATAAAGAGTTTGGAGTTTGTTAAACGTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000475168.1 |
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| CDS TCA 72 bp | ATTGGTCTCTTAGGAGTTCTCAAAAGAATTAGTAACTaGGTAACGTTAGATTCTAAGAAATGCCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGLLGVLKRISN*VTLDSKKCPLL Trigger: AAGAAGAGGGCATTTCTTAGAATCTAACGTTACTCAGTTACTAATTCTTTTGAGAACTCCTAAGAGACCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366639.9 ENST00000475168.1 |
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