RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSNARE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171045

Ensembl transcript IDs: ENST00000307180.4, ENST00000518720.5, ENST00000518928.1, ENST00000519651.5, ENST00000520166.5, ENST00000520462.5, ENST00000521825.1, ENST00000524325.6, ENST00000662555.1

Found 540 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTaGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: LSRVRLRASTPSARR*LCSASRCSSRFCWA
Trigger: GGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR TCA 90 bp GGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATaGGTGTGCTCTGCTGCTGGGCCCAGGAGGACAGCAGGGCGCCCT +
Preference number: 1 (lower is better)
Translates to: GSARPAAAAAGFAGP*VCSAAGPRRTAGRP
Trigger: AGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp CGCTGCAGCAGCAGGTTTTGCTGGGCCATGAGTGTGCTCTGCTGCTaGGCCCAGGAGGACAGCAGGGCGCCCTGCTGCCGGTGGGAGTCC +
Preference number: 1 (lower is better)
Translates to: RCSSRFCWAMSVLCC*AQEDSRAPCCRWES
Trigger: GGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp CCTCCAGCAGGCCCCTGGGCCACTCCACTGGCAGGACTACCGTCCTaGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGC +
Preference number: 1 (lower is better)
Translates to: PPAGPWATPLAGLPS*SEGEASRVGRASTS
Trigger: GCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp GCCTCCACGCCATCGGCCAGACGCTGGCTCTGCTCGGCCAGCCGCTaGAGCAGCAGGTTTTGCTGGGCCATGAGTGTGCTCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: ASTPSARRWLCSASR*SSRFCWAMSVLCCW
Trigger: CCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp AGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCTaGTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGAGT +
Preference number: 1 (lower is better)
Translates to: RVRLRASTPSARRWL*SASRCSSRFCWAMS
Trigger: ACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp CAGGGCGCCCTGCTGCCGGTGGGAGTCCAGCAGCTGCTGCTCAAATaGGGACGTTTCAGATGCTGCCGCTGGGGTCCTCCTGGAGGGCAA +
Preference number: 1 (lower is better)
Translates to: QGALLPVGVQQLLLK*GRFRCCRWGPPGGQ
Trigger: TTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp GAGGACAGCAGGGCGCCCTGCTGCCGGTGGGAGTCCAGCAGCTGCTaGTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: EDSRAPCCRWESSSC*SNADVSDAAAGVLL
Trigger: CAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTaGGCCATGAGTGTGCTCTGCTGCTGGGCCCAGGAGGACAGCAGG +
Preference number: 1 (lower is better)
Translates to: RRWLCSASRCSSRFC*AMSVLCCWAQEDSR
Trigger: CCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp TCAAGATCATCCCTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTaGGGCTGTCCTGGGAGCCTCCAGCAGGCCCCTGGGCCACTCCAC +
Preference number: 1 (lower is better)
Translates to: SRSSLRRPRAPSGCP*GCPGSLQQAPGPLH
Trigger: GTGGAGTGGCCCAGGGGCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp AGTGTGCTCTGCTGCTGGGCCCAGGAGGACAGCAGGGCGCCCTGCTaGCGGTGGGAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCA +
Preference number: 1 (lower is better)
Translates to: SVLCCWAQEDSRAPC*RWESSSCCSNADVS
Trigger: TGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp CCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTaGTGCCACATGGGGTTGGAGCCTCCAACAGCATCATCCCTGAGT +
Preference number: 1 (lower is better)
Translates to: PPPLLPGTLGCRLRS*CHMGLEPPTASSLS
Trigger: ACTCAGGGATGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR TCA 90 bp GGACAGCAGGCAGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTaGCGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: GQQAAVKLSGPLQAK*RHQLTTQRTPSAPS
Trigger: GCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCTGCCTGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
3UTR GCA 90 bp CTCAGCAGGGGAAAGACTGGAGGCCCTGCTCCTGCCCTTTGGCTCTaGCAGCACCCCCGACCAGCCCTATATCTCCTCCTCCACCTTCAA +
Preference number: 1 (lower is better)
Translates to: LSRGKTGGPAPALWL*QHPRPALYLLLHLQ
Trigger: TTGAAGGTGGAGGAGGAGATATAGGGCTGGTCGGGGGTGCTGGCAGAGCCAAAGGGCAGGAGCAGGGCCTCCAGTCTTTCCCCTGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 90 bp CCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTaGCACATGGGGTTGGAGCCTCCAACAGCATCATCCCTGAGTAGA +
Preference number: 1 (lower is better)
Translates to: PPLLPGTLGCRLRSC*HMGLEPPTASSLSR
Trigger: TCTACTCAGGGATGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp ACAGGTAGACAGCCCACATCCTCTCATCCTTCCGGTCTCCTGGACTaGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGCCACCTCTC +
Preference number: 1 (lower is better)
Translates to: TGRQPTSSHPSGLLD*SCPGALETQSLPPL
Trigger: GAGAGGTGGCAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGATGAGAGGATGTGGGCTGTCTACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp ACATCACAGGTAGACAGCCCACATCCTCTCATCCTTCCGGTCTCCTaGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGCCAC +
Preference number: 1 (lower is better)
Translates to: TSQVDSPHPLILPVS*TGVVPVPWRPSHCH
Trigger: GTGGCAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGATGAGAGGATGTGGGCTGTCTACCTGTGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 90 bp CCACCAAAGGGACAGGGGCTTTCAGGAGTCACACCAGATCACGCTTaGGACCTTTTTAGAGCCTGGCTGAGCCACCCTTTCCAGAGTTCC +
Preference number: 1 (lower is better)
Translates to: PPKGQGLSGVTPDHA*DLFRAWLSHPFQSS
Trigger: GGAACTCTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGAAAGCCCCTGTCCCTTTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CAA 90 bp GCTTCCCGGGTAGGGCGTGCTTCCACCAGCCTCTCGAGGGTCCGGTaGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCTGCTCGGCC +
Preference number: 2 (lower is better)
Translates to: ASRVGRASTSLSRVR*RASTPSARRWLCSA
Trigger: GGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCGCGCCCTGCTGCCGGTaGGAGTCCAGCAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SLSRVRLRASTPSARRWLAPCCR*ESSSCC
Trigger: GCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGC...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCCCATCGGCCAGACGCTaGCTCTGCTCGGCCAGCCGC +
Preference number: 2 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLPSARR*LCSASR
Trigger: GCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGG...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCGCTGGAAGGCCCCCATaGGTGTGGTTGCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SLSRVRLRASTPSARRWLAGRPP*VWLLVG
Trigger: CCCCACCAGCAACCACACTCATGGGGGCCTTCCAGC...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCCCGCTGGGGTCCTCCTaGAGGGCAAGGGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLPLGSS*RAREVL
Trigger: CAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGG...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CAA 90 bp GGCCAGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTaGCTGGGCCATGAGTGTGCTCTGCTGCTGGGCCCAGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: GQTLALLGQPLQQQV*LGHECALLLGPGGQ
Trigger: CTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCTCTCGAGGGTCCGGTTaGGGGCCTCCACGCCATCGG +
Preference number: 2 (lower is better)
Translates to: GLPSWSEGEASRVGRASTSRGSG*GPPRHR
Trigger: CCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGA...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 2 (lower is better)
Translates to: TASADNAADSISSQLRARRGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
3UTR-3UTR CCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCGAGGGCGGGGAAGGCTaGAAGGCCCCCATGAGTGTG +
Preference number: 2 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLEGGEG*KAPMSV
Trigger: CACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTC...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCATGCGGACGTTTCAGATaGTGCCGCTGGGGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPCGRFR*CRWGPP
Trigger: AGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCA...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCCACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGC +
Preference number: 2 (lower is better)
Translates to: LGSIAGQVTASADNAADSHTTAS*RFSGRC
Trigger: GCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTG...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
3UTR-3UTR GCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTGGACGTTTCAGATGCTaGCGCTGGGGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPGRFRC*RWGPPG
Trigger: TCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCC...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp CCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGTGCTCGGCCAGCCGCTaGAGCAGCAGGTTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: PSGLLDWSCPGALETQSLCSASR*SSRFCW
Trigger: CCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCA...CAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp CCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGTTCCCGGGTAGGGCGTaGTTCCACCAGCCTCTCGAG +
Preference number: 2 (lower is better)
Translates to: PSGLLDWSCPGALETQSLFPGRA*FHQPLE
Trigger: CTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAA...CAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTCTGGAGTTGTCCCGGTaGCCTGGAGACCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPLELSR*PGDPVT
Trigger: AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAG...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 2 (lower is better)
Translates to: GSIAGQVTASADNAADSIRGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
3UTR-3UTR TCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTCACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGC +
Preference number: 2 (lower is better)
Translates to: ISHSGLFGCSAGADTGASHTTAS*RFSGRC
Trigger: GCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTG...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
3UTR-3UTR CCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTGAGGAGGTGGGTGCGTaGAAGACTCCTCGTAAGTCC +
Preference number: 2 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPEEVGA*KTPRKS
Trigger: GGACTTACGAGGAGTCTTCCACGCACCCACCTCCTC...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp CTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTCCAACAGCAGGGAGGGTGAGGAGGTaGGTGCGTGGAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: LGCRLRSCCHMGLEPPTAGRVRR*VRGRLL
Trigger: GAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCC...TGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp ACCTGGTCCACTGAGTCCCACAGGTCGGCTCTCTGCAGCCTTTCCCTGCAGGTCGTTGTCCCGGTGCCCTaGAGACCCAGTCACTGCCAC +
Preference number: 2 (lower is better)
Translates to: TWSTESHRSALCSLSLQVVVPVP*RPSHCH
Trigger: GTGGCAGTGACTGGGTCTCCAGGGCACCGGGACAAC...GACCTGCAGGGAAAGGCTGCAGAGAGCCGACCTGTGGGACTCAGTGGACCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CAA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTaGGAGCCTCCAACAGCATCATCCCTGAGTAGACCTGGTCCACTG +
Preference number: 2 (lower is better)
Translates to: PGTLGCRLRSCCHMG*EPPTASSLSRPGPL
Trigger: CAGTGGACCAGGTCTACTCAGGGATGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp ACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCATCGGAGGGCAAGGGAGGTaGTGGCGCCGAAGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: TGNGKDATSQVDSPHPLIGGQGR*WRRRGR
Trigger: CCGCCCTCTTCGGCGCCAGCACCTCCCTTGCCCTCC...GATGAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTTGGGAGTCCAGCAGCTaGTGCTCAAATGCGGACGTT +
Preference number: 2 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPWESSS*CSNADV
Trigger: AACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCA...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 2 (lower is better)
Translates to: SCEALGSIAGQVTASADNRGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
3UTR-3UTR CCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGCAGCAGGTTTTGCTaGGCCATGAGTGTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GLPSWSEGEASRVGRASTSSRFC*AMSVLC
Trigger: GCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCT...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp CCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGTTTTGCTGGGCCATaGGTGTGCTCTGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: PPSRSSLRRPRAPSGCPWGFAGP*VCSAAG
Trigger: CCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACC...CCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCCAGCTGCTGCTCAAATaGGGACGTTTCAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: GLPSWSEGEASRVGRASTQLLLK*GRFRCC
Trigger: GCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTG...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCCCTGCCCTTTGGCTCTaGCAGCACCCCCGACCAGCC +
Preference number: 2 (lower is better)
Translates to: STGNGKDATSQVDSPHPLPALWL*QHPRPA
Trigger: GGCTGGTCGGGGGTGCTGGCAGAGCCAAAGGGCAGG...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTAGTGACGGCATCAGCTaGCAACGCAGCGGACTCCAT +
Preference number: 2 (lower is better)
Translates to: ISHSGLFGCSAGADTGASSDGIS*QRSGLH
Trigger: ATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACT...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
3UTR-3UTR GCA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTTGCAGCAGCAGGTTTTaGTGGGCCATGAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTCSSRF*WAMSVL
Trigger: GAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCA...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR TCA 90 bp ATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGGGCAGAGGAGCCCTGCCCTTTTTTAGAGCCTGGCTaGGCCACCCTTTCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: MGCGSPGPEPRRAEEPCPFLEPG*ATLSRV
Trigger: AACTCTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAA...AGGGCAGGGCTCCTCTGCCCTACGTGGTTCTGGCCCAGGGGAACCACATCCCAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCAAAGACTGGAGGCCCTaGTCCTGCCCTTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: STGNGKDATSQVDSPHPLKDWRP*SCPLAL
Trigger: CAGAGCCAAAGGGCAGGAGCAGGGCCTCCAGTCTTT...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR GCA 90 bp TCAGGAGTCACACCAGATCACGCTTGGGACCTTTTTAGAGCCTGGCTGAGCCACTGCAGACTTCGCAGCTaGTGCCACATGGGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: SGVTPDHAWDLFRAWLSHCRLRS*CHMGLE
Trigger: CTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCA...GTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CCA 90 bp ATAGAAATTATTCCAGGCATATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGCAGGACTACCGTCCTaGAGTGAGGGTGAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: IEIIPGIWDVVPLGQNHVAGLPS*SEGEAS
Trigger: GGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGC...TACGTGGTTCTGGCCCAGGGGAACCACATCCCATATGCCTGGAATAATTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp GTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTaGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: VRLRASTPSARR*LCSASRCSSRF
Trigger: AAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp GGCCCCTGGGCCACTCCACTGGCAGGACTACCGTCCTaGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCT +
Preference number: 3 (lower is better)
Translates to: GPWATPLAGLPS*SEGEASRVGRA
Trigger: AGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp TTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCTaGTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LRASTPSARRWL*SASRCSSRFCW
Trigger: CCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp AGCAGGTTTTGCTGGGCCATGAGTGTGCTCTGCTGCTaGGCCCAGGAGGACAGCAGGGCGCCCTGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: SRFCWAMSVLCC*AQEDSRAPCCR
Trigger: CCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp CCATCGGCCAGACGCTGGCTCTGCTCGGCCAGCCGCTaGAGCAGCAGGTTTTGCTGGGCCATGAGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: PSARRWLCSASR*SSRFCWAMSVL
Trigger: GAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CAA 90 bp TCCACCAGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCCTGCAGCAGCAGGTTTaGCTGGGCCATGAGTGTGCT +
Preference number: 3 (lower is better)
Translates to: STSLSRVRLRASTPSARRLQQQV*LGHECA
Trigger: AGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAG...GCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR-3UTR CAA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTCTCTCGAGGGTCCGGTaGAGGGCCTCCACGCCATCG +
Preference number: 3 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTLSRVR*RASTPS
Trigger: CGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAG...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp CAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTaGCGCTGGGGTCCTCCTGGAGGGCAAGGGAGGTGC +
Preference number: 3 (lower is better)
Translates to: QQLLLKCGRFRC*RWGPPGGQGRC
Trigger: GCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp GTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATaGTGCCGCTGGGGTCCTCCTGGAGGGCAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: VQQLLLKCGRFR*CRWGPPGGQGR
Trigger: CCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp GGAAAGACTGGAGGCCCTGCTCCTGCCCTTTGGCTCTaGCAGCACCCCCGACCAGCCCTATATCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: GKTGGPAPALWL*QHPRPALYLLL
Trigger: GAGGAGGAGATATAGGGCTGGTCGGGGGTGCTGGCAGAGCCAAAGGGCAGGAGCAGGGCCTCCAGTCTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp TCATCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTaGCCTGGAGACCCAGTCACTGCCACCTCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: SSFRSPGLELSR*PGDPVTATSPL
Trigger: CAGGGGAGAGGTGGCAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR TCA 72 bp TCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTaGCAACGCAGCGGACTCCATCAGCTCCCAGCTCCG +
Preference number: 3 (lower is better)
Translates to: SRVHCRPSDGIS*QRSGLHQLPAP
Trigger: CGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
3UTR GCA 72 bp CTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTaGCACATGGGGTTGGAGCCTCCAACAGCATCATCC +
Preference number: 3 (lower is better)
Translates to: LPGTLGCRLRSC*HMGLEPPTASS
Trigger: GGATGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR GCA 72 bp CTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTaGTGCCACATGGGGTTGGAGCCTCCAACAGCATCA +
Preference number: 3 (lower is better)
Translates to: LLPGTLGCRLRS*CHMGLEPPTAS
Trigger: TGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp TTCAAGATCATCCCTGAGAAGACCTCGAGCCCCGAGTaGGTGCCCTTGGGGCTGTCCTGGGAGCCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: FKIIPEKTSSPE*VPLGLSWEPPA
Trigger: TGCTGGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp GTAGACAGCCCACATCCTCTCATCCTTCCGGTCTCCTaGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGT +
Preference number: 3 (lower is better)
Translates to: VDSPHPLILPVS*TGVVPVPWRPS
Trigger: ACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGATGAGAGGATGTGGGCTGTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR TCA 72 bp GCCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTaGGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: ALYLLLHLQDHP*EDLEPRVGALG
Trigger: CCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR TCA 72 bp CACCAGATCACGCTTGGGACCTTTTTAGAGCCTGGCTaGGCCACCCTTTCCAGAGTTCCAGTGAGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: HQITLGTFLEPG*ATLSRVPVSRG
Trigger: CCCCCTGCTCACTGGAACTCTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp AGCCTTTCCCTGCAGGTCACCACCCTCTACAGGCAATaGCAAGGACGCGACATCACAGGTAGACAGCCCACA +
Preference number: 3 (lower is better)
Translates to: SLSLQVTTLYRQ*QGRDITGRQPT
Trigger: TGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGAGGGTGGTGACCTGCAGGGAAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp GGACAGGGGCTTTCAGGAGTCACACCAGATCACGCTTaGGACCTTTTTAGAGCCTGGCTGAGCCACCCTTTC +
Preference number: 3 (lower is better)
Translates to: GQGLSGVTPDHA*DLFRAWLSHPF
Trigger: GAAAGGGTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGAAAGCCCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CCA 72 bp GTCACACCAGATCACGCTTGGGACCTTTTTAGAGCCTaGCTGAGCCACCCTTTCCAGAGTTCCAGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: VTPDHAWDLFRA*LSHPFQSSSEQ
Trigger: CTGCTCACTGGAACTCTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGCCCGCCATCCGGCCATaGGGCCCAGCAGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPPAIRP*GPAAES
Trigger: GGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGG...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTGCCGGAACCAGGGCTaGGGCCATGGGCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTACRNQG*GHGPPS
Trigger: GGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGTGCCGGAACCAGGGCTaGGGCCATGGGCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQCRNQG*GHGPPS
Trigger: GGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCA...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTGCTGCAGACGCTCCTaGGGGCAGGAGCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTACCRRS*GQELRS
Trigger: GCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTCCGGGAGCAGCGCCTaGTCCTGGCCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTASGSSA*SWPCHM
Trigger: CATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGTCCGGGAGCAGCGCCTaGTCCTGGCCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQSGSSA*SWPCHM
Trigger: CATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGA...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCGCCTCCACACTGAGCTaGGCCTCGGTGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAASTLS*ASVARG
Trigger: TCCGCGAGCCACCGAGGCCCAGCTCAGTGTGGAGGC...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR TCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGCAGCAGCCTCCACACTaGGCTGGGCCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPQQPPH*AGPRWL
Trigger: GAGCCACCGAGGCCCAGCTCAGTGTGGAGGCTGCTG...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGCTCCGGCATCCGGCTaGCTTCAGGGGCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADAPASG*LQGQPQ
Trigger: CTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACTGCTGCAGACGCTCCTaGGGGCAGGAGCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADCCRRS*GQELRS
Trigger: GCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCA...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACTCCGGGAGCAGCGCCTaGTCCTGGCCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADSGSSA*SWPCHM
Trigger: CATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGA...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTGGTGGGTGATGAGGTaGGCTCCGGCATCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAWWVMR*APASGC
Trigger: GCAGCCGGATGCCGGAGCCCACCTCATCACCCACCA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCCCTCCCGCAGCCGGATaGCCTCCAGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAPPAAG*PPGPLQ
Trigger: CTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGG...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGCTCCAGCCAGGAGCTaGCGGGCTGCCTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRAPARS*RAASAC
Trigger: GCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGGAGTTGGTGCCGGCTaGCTCCAGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPGVGAG*LQPGAG
Trigger: GCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTCC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPRGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCAGCAGCCTCCACACTaGGCTGGGCCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRQQPPH*AGPRWL
Trigger: GAGCCACCGAGGCCCAGCTCAGTGTGGAGGCTGCTG...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR TCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGTGGGCGGCTCCAGACTaGAGCCCTCGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMWAAPD*SPRRAG
Trigger: CCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCA...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACTGGGCGGCTCCAGACTaGAGCCCTCGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHWAAPD*SPRRAG
Trigger: CCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCA...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGGAGGTCGCCCAGCTTaGGCCGCACGACGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRGGRPA*AARRLV
Trigger: TACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCCTGCGGGCAGGAGCTaGGCAGCAGCTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVPAGRS*AAARPS
Trigger: AGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCAGGAGCTGGCGGGCTaGCTCCGCATGCGAGGACGC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQQELAG*LRMRGR
Trigger: GCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTG...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACCAGGAGCTGGCGGGCTaGCTCCGCATGCGAGGACGC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHQELAG*LRMRGR
Trigger: GCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTG...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGTGGTGGGTGATGAGGTaGGCTCCGGCATCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPWWVMR*APASGC
Trigger: GCAGCCGGATGCCGGAGCCCACCTCATCACCCACCA...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTACCCGCCATCCGGCCATaGGGCCCAGCAGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVPAIRP*GPAAES
Trigger: GGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGG...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACATTCGGGTGCTCAGCTaGGGCCGACACAGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADIRVLS*GRHRGE
Trigger: CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAAT...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR TCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATGGGCGGCTCCAGACTaGAGCCCTCGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVWAAPD*SPRRAG
Trigger: CCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAGVPKD*RLRSKE
Trigger: CTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACC...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRHTTAS*RFSGRC
Trigger: GCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTG...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGAGCGGTTCTGCAGCTTaGTCTCTGGCGACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPSGSAA*SLATGR
Trigger: CCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCT...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACAGCGGTTCTGCAGCTTaGTCTCTGGCGACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADSGSAA*SLATGR
Trigger: CCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCT...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGGCTCCGGCATCCGGCTaGCTTCAGGGGCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMAPASG*LQGQPQ
Trigger: CTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGC...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGAGCGCATTCACGGCCTaGAGGATGCGGCTCCACACG +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPSAFTA*RMRLHT
Trigger: CGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCT...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGGAGGTCGCCCAGCTTaGGCCGCACGACGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQGGRPA*AARRLV
Trigger: TACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCC...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGGGAGGTCGCCCAGCTTaGGCCGCACGACGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMGGRPA*AARRLV
Trigger: TACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCC...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTGTCTTGGCCACCACCTaGTCCACGGGCGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVVLATT*STGVRA
Trigger: GGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGTTGGTCTCCTGCTGTaGCGTGTGCAGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADVGLLL*RVQAVP
Trigger: CGGGACAGCCTGCACACGGCACAGCAGGAGACCAAC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGCCTGCTCCTGGCCCTaGCACATGTTGTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADACSWP*HMLSLP
Trigger: CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACCGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHRAASA*EDAASR
Trigger: CCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCG...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPRAASA*EDAASR
Trigger: CCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCG...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGCAGGAGCTGGCGGGCTaGCTCCGCATGCGAGGACGC +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMQELAG*LRMRGR
Trigger: GCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTG...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTACAGGAGCTGGCGGGCTaGCTCCGCATGCGAGGACGC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVQELAG*LRMRGR
Trigger: GCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTG...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGGCCTCCACACTGAGCTaGGCCTCGGTGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMASTLS*ASVARG
Trigger: TCCGCGAGCCACCGAGGCCCAGCTCAGTGTGGAGGC...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGTCCTCGGGCCAATGGTaGGTGATGAGGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPSSGQW*VMRWAP
Trigger: CGGAGCCCACCTCATCACCCACCATTGGCCCGAGGA...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGGTGAGAGCCAGGGCCTaGGGCTTGCCGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMVRARA*GLPEPG
Trigger: CCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCAC...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGTTGCACGGATCGACCTaGGTGGCTCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRLHGST*VALGGS
Trigger: GGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAA...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGAGTTGGTGCCGGCTaGCTCCAGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHGVGAG*LQPGAG
Trigger: GCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTCC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGGCGCCCTGCTGCCGGTaGGAGTCCAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMAPCCR*ESSSCC
Trigger: GCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGC...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTCGGCAAACGGGGCCTaGGGACTCTGTTTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTASANGA*GLCLLP
Trigger: GGGCAGTAAACAGAGTCCCCAGGCCCCGTTTGCCGA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADGVPKD*RLRSKE
Trigger: CTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPGVPKD*RLRSKE
Trigger: CTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCCCATTGCAGGCCAAGTaGCGGCATCAGCTGACAACG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAPLQAK*RHQLTT
Trigger: CGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGG...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp CCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGCCTCGCTGGAAGGCCCCCATaGGTGTGGTTGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSWSEGEASRVGRASTSLAGRPP*VWLLVG
Trigger: CCCCACCAGCAACCACACTCATGGGGGCCTTCCAGC...GAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGAGCGGTTCTGCAGCTTaGTCTCTGGCGACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRSGSAA*SLATGR
Trigger: CCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCT...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGCCCACACAGCGGTTCTaGAGCTTGCTCTCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPPTQRF*SLLSGD
Trigger: GTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGG...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACAGCACCTCGGTCTCCTaGGGGCAGAAGTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADSTSVS*GQKLGF
Trigger: GAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCT...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTCACGGCCTGCAGGATaGGGCTCCACACGCGGTACC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQSRPAG*GSTRGT
Trigger: GGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCATCACGGCCTGCAGGATaGGGCTCCACACGCGGTACC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSSRPAG*GSTRGT
Trigger: GGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGA...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTAGCGCATTCACGGCCTaGAGGATGCGGCTCCACACG +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVSAFTA*RMRLHT
Trigger: CGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCT...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGTCTTGGCCACCACCTaGTCCACGGGCGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQVLATT*STGVRA
Trigger: GGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTCTTGGCCACCACCTaGTCCACGGGCGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSVLATT*STGVRA
Trigger: GGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCGTCTTGTTGGTCTCCTaGTGTGCCGTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTAVLLVS*CAVCRL
Trigger: CAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGAGCGGTTTATTCGGGTaGTCAGCTGGGGCCGACACA +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQSGLFG*SAGADT
Trigger: TGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCT...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGGCTCCGGGCAGGAGCTaGGCAGCAGCTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMAPGRS*AAARPS
Trigger: AGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGGAGC...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCTGCTCGGCCAGCCGCTaGAGCAGCAGGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLCSASR*SSRFCW
Trigger: CCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCA...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCCCTGCCCTTTGGCTCTaGCAGCACCCCCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GLPSWSEGEASRVGRASTPALWL*QHPRPA
Trigger: GGCTGGTCGGGGGTGCTGGCAGAGCCAAAGGGCAGG...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACCTGCAGCTTGCTCTCTaGCGACGGGCAGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADLQLAL*RRAGEM
Trigger: CATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAG...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACTCGCTTCCTGGCCCTTaGGACAATAGGCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADSLPGP*DNRRAC
Trigger: GCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGA...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTTCCTCGGGCCAATGGTaGGTGATGAGGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVSSGQW*VMRWAP
Trigger: CGGAGCCCACCTCATCACCCACCATTGGCCCGAGGA...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGCCTTCCTCGGGCCAATaGTGGGTGATGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPPSSGQ*WVMRWA
Trigger: AGCCCACCTCATCACCCACCATTGGCCCGAGGAAGG...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGGGTGCTTGCTCACCTTaGACACCAGCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQGACSP*TPAPRS
Trigger: AGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACC...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTAGTGAGAGCCAGGGCCTaGGGCTTGCCGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVVRARA*GLPEPG
Trigger: CCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCAC...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGTCGGAGGGCAGGGCCTaGCAAGAGAAGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRSEGRA*QEKVLA
Trigger: GGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGA...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTCGGCAAACGGGGCCTaGGGACTCTGCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: SQLRARRGARGWRAHTTASANGA*GLCCLL
Trigger: CAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000520166.5
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGTCTCCATCTGCAGGATaGCCTCCTCCCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRSPSAG*PPPAAG
Trigger: TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGA...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCGGGAGGGTGAGGAGGTaGGTGCGTGGAAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLGRVRR*VRGRLL
Trigger: GAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCC...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACCTGCTCCTGCCCTTTaGCTCTGCCAGCACCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPPAPAL*LCQHPR
Trigger: TCGGGGGTGCTGGCAGAGCCAAAGGGCAGGAGCAGG...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGCAGCAGCCTCCACACTaGGCTGGGCCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSGLLDWSCPGALETQSLQQPPH*AGPRWL
Trigger: GAGCCACCGAGGCCCAGCTCAGTGTGGAGGCTGCTG...CAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTGCGCACTCTAGGGGCTaGCAGCCTTGTCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVAHSRG*QPCLEG
Trigger: ACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGC...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGACAATAGGCGTGCCTaGTGGCCCCAGATCACCTTC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPDNRRA*WPQITF
Trigger: GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGAGCGCATTCACGGCCTaGAGGATGCGGCTCCACACG +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQSAFTA*RMRLHT
Trigger: CGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCT...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACAGGTCCCGCCACTTGTaGTTCAGGTCCACAACGTCG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADRSRHL*FRSTTS
Trigger: CGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCT...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCCCAGGGCCTGGGGCTTaGCGGAACCAGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIPGPGA*RNQGWG
Trigger: GCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGG...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGTTGGTCTCCTGCTGTaGCGTGTGCAGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHVGLLL*RVQAVP
Trigger: CGGGACAGCCTGCACACGGCACAGCAGGAGACCAAC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTTGGTCTCCTGCTGTaGCGTGTGCAGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSVGLLL*RVQAVP
Trigger: CGGGACAGCCTGCACACGGCACAGCAGGAGACCAAC...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPGAGAG*NGLVGL
Trigger: GAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADGAGAG*NGLVGL
Trigger: GAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQSSSAI*FTELAL
Trigger: CAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCT...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGCCTGCTCCTGGCCCTaGCACATGTTGTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQACSWP*HMLSLP
Trigger: CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGC...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGAGCTCTCGGGTCCATTaGAGGCCAAGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPSSRVH*RPSDGI
Trigger: GATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCT...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGGAGGGCAAGGGAGGTaGTGGCGCCGAAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTGGQGR*WRRRGR
Trigger: CCGCCCTCTTCGGCGCCAGCACCTCCCTTGCCCTCC...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGACGGGCAGGGGAAATaGCGGATTCCATACTCGGTC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPDGQGK*RIPYSV
Trigger: GACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGAATAGGCGTGCCTGCTaGCCCCAGATCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRNRRAC*PQITFP
Trigger: GGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATT...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCTTCCTCGGGCCAATaGTGGGTGATGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRPSSGQ*WVMRWA
Trigger: AGCCCACCTCATCACCCACCATTGGCCCGAGGAAGG...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCCTGCGGGCAGAAGTTaGGCTTCCTCTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVPAGRS*ASSSWP
Trigger: GGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCCAAACAGCAGCTGGTaGTGCTTGCTCACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQPNSSW*CLLTLD
Trigger: GTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGG...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCATCGGAGGGCAGGGCCTaGCAAGAGAAGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSSEGRA*QEKVLA
Trigger: GGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGA...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATTGCACGGATCGACCTaGGTGGCTCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVLHGST*VALGGS
Trigger: GGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACTCACGGAGCTGGCGCTaGCTGCAATGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADSRSWR*LQWSCW
Trigger: CCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGA...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGTCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPSASRS*RWLQWS
Trigger: AGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGTGCCCCTCTGCGCCATaGGAAGCAGCGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMCPSAP*EAALWT
Trigger: AGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCA...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGCCTCCCGCAGCCGGATaGCCTCCAGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARPPAAG*PPGPLQ
Trigger: CTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGG...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCCCTGGGCCACTCCACTaGCAGGACTACCGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLPGPLH*QDYRPG
Trigger: TCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGG...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
3UTR CAA 72 bp CTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTaGCTGGGCCATGAGTGTGCTCTGCTGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LALLGQPLQQQV*LGHECALLLGP
Trigger: TGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADALNGI*ELGFQP
Trigger: CGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGC...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTAGTGACGGCATCAGCTaGCAACGCAGCGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVSDGIS*QRSGLH
Trigger: ATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACT...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGAGTGACGGCATCAGCTaGCAACGCAGCGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRSDGIS*QRSGLH
Trigger: ATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACT...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCGGTTTTGCTGGGCCATaGGTGTGCTCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLGFAGP*VCSAAG
Trigger: CCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACC...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCCCACACAGCGGTTCTaGAGCTTGCTCTCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQPTQRF*SLLSGD
Trigger: GTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGG...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGAGCACCTCGGTCTCCTaGGGGCAGAAGTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMSTSVS*GQKLGF
Trigger: GAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCT...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGAACAGCAGCTGGTGGTaGTTGCTCACCTTGGACACC +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPNSSWW*LLTLDT
Trigger: GGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTT...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCACTGTCCCGAAGCTCCTaGGTGTCACTCGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSLSRSS*VSLGVP
Trigger: AGGGACACCGAGTGACACGCAGGAGCTTCGGGACAG...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGGCTGTCCTGGGAGCCTCCTGTCCCGAAGCTCCTaGGTGTCACTCGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LRRPRAPSGCPWGCPGSLLSRSS*VSLGVP
Trigger: AGGGACACCGAGTGACACGCAGGAGCTTCGGGACAG...GAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCTGTCCCGAAGCTCCTaGGTGTCACTCGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMLSRSS*VSLGVP
Trigger: AGGGACACCGAGTGACACGCAGGAGCTTCGGGACAG...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLGAGAG*NGLVGL
Trigger: GAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCC...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTAAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVSSSAI*FTELAL
Trigger: CAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCT...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGTCAACAGCTTCTCCTTaGTCTGACACCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQSTASP*SDTMEA
Trigger: GGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTGCAGCAGCAGGTTTTGCTGGGCCATGAGTGTGCTCTGCTGCTGGGCCCAGGAGCCTCCACACTGAGCTaGGCCTCGGTGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LQQQVLLGHECALLLGPGASTLS*ASVARG
Trigger: TCCGCGAGCCACCGAGGCCCAGCTCAGTGTGGAGGC...TCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGACGGGCAGGGGAAATaGCGGATTCCATACTCGGTC +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRDGQGK*RIPYSV
Trigger: GACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCTGCAGCTTGCTCTCTaGCGACGGGCAGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMLQLAL*RRAGEM
Trigger: CATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAG...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTCGCTTCCTGGCCCTTaGGACAATAGGCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQSLPGP*DNRRAC
Trigger: GCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATCCTCGGGCCAATGGTaGGTGATGAGGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVSSGQW*VMRWAP
Trigger: CGGAGCCCACCTCATCACCCACCATTGGCCCGAGGA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCACCTTCCTCGGGCCAATaGTGGGTGATGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSPSSGQ*WVMRWA
Trigger: AGCCCACCTCATCACCCACCATTGGCCCGAGGAAGG...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCCCCGCCATCCGGCCATaGGGCCCAGCAGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISPAIRP*GPAAES
Trigger: GGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGG...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACCCTGCGGGCAGAAGTTaGGCTTCCTCTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHPAGRS*ASSSWP
Trigger: GGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGG...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGTGCCAAACAGCAGCTaGTGGTGCTTGCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPVPNSS*WCLLTL
Trigger: CAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCAC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACC +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVSWNSS*RLHGST
Trigger: GGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGA...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTGCCCCTCTGCGCCATaGGAAGCAGCGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARCPSAP*EAALWT
Trigger: AGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTCTCCATCTGCAGGATaGCCTCCTCCCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARSPSAG*PPPAAG
Trigger: TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCACCTCTCCCCTGCCTGGACTCAGCAGGGGAAAGACTGGAGGCCCTGCTCCTGTCTCCATCTGCAGGATaGCCTCCTCCCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PPLPCLDSAGERLEALLLSPSAG*PPPAAG
Trigger: TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGA...CAGGAGCAGGGCCTCCAGTCTTTCCCCTGCTGAGTCCAGGCAGGGGAGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTGCTCCAGCCAGGAGCTaGCGGGCTGCCTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: ISHSGLFGCSAGADTGASAPARS*RAASAC
Trigger: GCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGC...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp GATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGGGAGTTGGTGCCGGCTaGCTCCAGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DKPQRFIRVLSWGRHRGEGVGAG*LQPGAG
Trigger: GCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTCC...CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTTGTGTCTCTGGAGTTaGTGCCGGCTGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQLCLWS*CRLAPA
Trigger: GGCTGGAGCCAGCCGGCACCAACTCCAGAGACACAA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AATGCGGACGTTTCAGATGCTGCCGCTGGGGTCCTCCTGGAGGGCAAGGGAGGTACCTCGAGCCCCGAGTaGGTGCCCTTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NADVSDAAAGVLLEGKGGTSSPE*VPLGLS
Trigger: GGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGT...ACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCCACCAGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCCAGGCATATGGGATGTaGTTCCCCTGGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: STSLSRVRLRASTPSARRQAYGM*FPWART
Trigger: GGTTCTGGCCCAGGGGAACCACATCCCATATGCCTG...GCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGAGGTCACACTGGAGTTaGTTCGGAAGACGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRRSHWS*FGRRWP
Trigger: CGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCT...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTAGGTCACACTGGAGTTaGTTCGGAAGACGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVRSHWS*FGRRWP
Trigger: CGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCT...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRALNGI*ELGFQP
Trigger: CGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCAGCTTCTCCTTGCTCTaGCACCATGGAGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLSFSLL*HHGGQV
Trigger: GACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCT...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGTGGGTGGCTAGGGGCTaGCAGCCTTGTCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMWVARG*QPCLEG
Trigger: ACCTTCGAGACAAGGCTGTCAGCCCCTAGCCACCCA...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TCCACCAGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCCTTCAAGATCATCCCTaGGAAGACCTCGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: STSLSRVRLRASTPSARRLQDHP*EDLEPR
Trigger: TCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAG...GCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTGTAGACCTGGTCCACTaGGTCCCACAGGTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPVDLVH*VPQVGS
Trigger: AGAGCCGACCTGTGGGACTCAGTGGACCAGGTCTAC...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGGACAATAGGCGTGCCTaGTGGCCCCAGATCACCTTC +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMDNRRA*WPQITF
Trigger: GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTC...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGACAATAGGCGTGCCTaGTGGCCCCAGATCACCTTC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSDNRRA*WPQITF
Trigger: GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTC...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTAAGCACCTCGGTCTCCTaGGGGCAGAAGTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVSTSVS*GQKLGF
Trigger: GAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCT...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACCCAGGGCCTGGGGCTTaGCGGAACCAGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNPGPGA*RNQGWG
Trigger: GCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGG...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGTCTTGTTGGTCTCCTaGTGTGCCGTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHVLLVS*CAVCRL
Trigger: CAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGCCTCGTCTTGTTGGTCTCCTaGTGTGCCGTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSWSEGEASRVGRASTSLVLLVS*CAVCRL
Trigger: CAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC...GAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSGAGAG*NGLVGL
Trigger: GAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCC...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTTGCTGCAGACGCTCCTaGGGGCAGGAGCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ISHSGLFGCSAGADTGASCCRRS*GQELRS
Trigger: GCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCA...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTGTTTACTGCCCCTCTaGGCCATGGGAAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQCLLPL*AMGSSA
Trigger: AGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGAGCTCTCGGGTCCATTaGAGGCCAAGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQSSRVH*RPSDGI
Trigger: GATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCT...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACAGCGGTTTATTCGGGTaGTCAGCTGGGGCCGACACA +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHSGLFG*SAGADT
Trigger: TGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCT...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCTGCGGACGTTTCAGATaGTGCCGCTGGGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLPSWSEGEASRVGRASTCGRFR*CRWGPP
Trigger: AGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCA...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCAAAAGACTGGAGGCCCTaGTCCTGCCCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPKDWRP*SCPLAL
Trigger: CAGAGCCAAAGGGCAGGAGCAGGGCCTCCAGTCTTT...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CCACCTCTCCCCTGCCTGGACTCAGCAGGGGAAAGACTGGAGGCCCTGCTCCTGCTGGAGTTGTCCCGGTaGCCTGGAGACCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PPLPCLDSAGERLEALLLLELSR*PGDPVT
Trigger: AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAG...CAGGAGCAGGGCCTCCAGTCTTTCCCCTGCTGAGTCCAGGCAGGGGAGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ACCTGGTCCACTGAGTCCCACAGGTCGGCTCTCTGCAGCCTTTCCCTGCAGGTCCCAGGGACGCTGGGCTaGAGACTTCGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWSTESHRSALCSLSLQVPGTLG*RLRSCC
Trigger: GCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG...GACCTGCAGGGAAAGGCTGCAGAGAGCCGACCTGTGGGACTCAGTGGACCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCTGGTGGGTGATGAGGTaGGCTCCGGCATCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSWWVMR*APASGC
Trigger: GCAGCCGGATGCCGGAGCCCACCTCATCACCCACCA...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGCCTGCGGGCAGAAGTTaGGCTTCCTCTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARPAGRS*ASSSWP
Trigger: GGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGG...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGGTGCTTGCTCACCTTaGACACCAGCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQGACSP*TPAPRS
Trigger: AGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACC...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGTGCTTGCTCACCTTaGACACCAGCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHGACSP*TPAPRS
Trigger: AGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCCAAACAGCAGCTGGTaGTGCTTGCTCACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVPNSSW*CLLTLD
Trigger: GTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCGTGAGAGCCAGGGCCTaGGGCTTGCCGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIVRARA*GLPEPG
Trigger: CCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCAC...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCATCACGGAGCTGGCGCTaGCTGCAATGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPSRSWR*LQWSCW
Trigger: CCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGA...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATTGTGTCTCTGGAGTTaGTGCCGGCTGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVLCLWS*CRLAPA
Trigger: GGCTGGAGCCAGCCGGCACCAACTCCAGAGACACAA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGTTGATCTTGTGTCTCTaGAGTTGGTGCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPLILCL*SWCRLA
Trigger: AGCCAGCCGGCACCAACTCCAGAGACACAAGATCAA...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AATGCGGACGTTTCAGATGCTGCCGCTGGGGTCCTCCTGGAGGGCAAGGGAGGTTCAGTTGGTGCCGGCTaGCTCCAGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: NADVSDAAAGVLLEGKGGSVGAG*LQPGAG
Trigger: GCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTGA...ACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGGAGGTGGGTGCGTGGAAGACTCCTCGTAAGTCCAGGGGGTCAGGTTCAGGCACCGCTGGGGTCCTCCTaGAGGGCAAGGGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RRWVRGRLLVSPGGQVQAPLGSS*RAREVL
Trigger: CAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGG...TGCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCAGCAGCAGGTTTTGCTaGGCCATGAGTGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLSSRFC*AMSVLC
Trigger: GCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCT...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSALNGI*ELGFQP
Trigger: CGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGC...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACAGCTTCTCCTTGCTCTaGCACCATGGAGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHSFSLL*HHGGQV
Trigger: GACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCT...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGAGTGACGGCATCAGCTaGCAACGCAGCGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARSDGIS*QRSGLH
Trigger: ATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACT...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCGCTCCGGCATCCGGCTaGCTTCAGGGGCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISAPASG*LQGQPQ
Trigger: CTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGC...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCCCTGCGGGCAGGAGCTaGGCAGCAGCTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISPAGRS*AAARPS
Trigger: AGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATGTTTACTGCCCCTCTaGGCCATGGGAAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVCLLPL*AMGSSA
Trigger: AGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCTGTTTACTGCCCCTCTaGGCCATGGGAAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GLPSWSEGEASRVGRASTCLLPL*AMGSSA
Trigger: AGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACA...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GGGAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGGCCTGCTCCTGGCCCTaGCACATGTTGTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: GSPAAAAQMRTFQMLPLGACSWP*HMLSLP
Trigger: CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGC...CCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTTGGAGACCCAGTCACTaGCACCTCTCCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTWRPSH*HLSPAW
Trigger: CCAGGCAGGGGAGAGGTGGCAGTGACTGGGTCTCCA...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp AGGAGGTGGGTGCGTGGAAGACTCCTCGTAAGTCCAGGGGGTCAGGTTCAGGCACTTCCCCACCTCCCCTaGTTCCAGGGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRWVRGRLLVSPGGQVQALPHLP*FQGRWA
Trigger: AGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGGGAAG...TGCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGGGGGACTCTGTTTACTaGCCCTCTGCGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARGDSVY*PSAPWE
Trigger: TTCCCATGGCGCAGAGGGGCAGTAAACAGAGTCCCC...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTAGACGGGCAGGGGAAATaGCGGATTCCATACTCGGTC +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVDGQGK*RIPYSV
Trigger: GACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTC...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCACCAAACAGCAGCTGGTaGTGCTTGCTCACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSPNSSW*CLLTLD
Trigger: GTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGG...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGTGCCAAACAGCAGCTaGTGGTGCTTGCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHVPNSS*WCLLTL
Trigger: CAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCAC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATGCCGGAACCAGGGCTaGGGCCATGGGCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNACRNQG*GHGPPS
Trigger: GGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCTCGGAGGGCAGGGCCTaGCAAGAGAAGGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSSEGRA*QEKVLA
Trigger: GGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGA...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACC +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARSWNSS*RLHGST
Trigger: GGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQLADIS*NSSWRL
Trigger: CAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGCTCCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SLSRVRLRASTPSARRWLLQWSC*SPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAG...GAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACTGGCGCTGGCTGCAATaGTCTTGTTGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHWRWLQ*SCWSPA
Trigger: AGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCA...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGTGGCGCTGGCTGCAATaGTCTTGTTGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMWRWLQ*SCWSPA
Trigger: AGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCA...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACATGGCATCTGAGAGCTaGGTTTTCAGCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHMASES*VFSRSS
Trigger: GCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCAT...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTGCCCCTCTGCGCCATaGGAAGCAGCGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: DKPQRFIRVLSWGRHRGECPSAP*EAALWT
Trigger: AGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCA...CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp ACCTGGTCCACTGAGTCCCACAGGTCGGCTCTCTGCAGCCTTTCCCTGCAGGTCTGCCCCTCTGCGCCATaGGAAGCAGCGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TWSTESHRSALCSLSLQVCPSAP*EAALWT
Trigger: AGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCA...GACCTGCAGGGAAAGGCTGCAGAGAGCCGACCTGTGGGACTCAGTGGACCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTCGGCAAACGGGGCCTaGGGACTCTGCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARSANGA*GLCCLL
Trigger: CAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000520166.5
CDS-3UTR CCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGACGCAGCCTCAAGGCTaGCTTCAATACTATCAACAG +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQTQPQG*LQYYQQ
Trigger: CTGTTGATAGTATTGAAGCCAGCCTTGAGGCTGCGT...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISRGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGATCCTTCCGGTCTCCTaGACTGGAGTTGTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMILPVS*TGVVPV
Trigger: CACCGGGACAACTCCAGTCCAGGAGACCGGAAGGAT...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCGCGCACTCTAGGGGCTaGCAGCCTTGTCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSAHSRG*QPCLEG
Trigger: ACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGC...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGCCTCTCGAGGAGGTCACACTGGAGTTaGTTCGGAAGACGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: WSEGEASRVGRASTSLSRRSHWS*FGRRWP
Trigger: CGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCT...CCTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGAGCTTCTCCTTGCTCTaGCACCATGGAGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARSFSLL*HHGGQV
Trigger: GACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCT...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCCACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISHTTAS*RFSGRC
Trigger: GCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTG...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGAACAGCAGCTGGTGGTaGTTGCTCACCTTGGACACC +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARNSSWW*LLTLDT
Trigger: GGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTT...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGGACTCTGCTGTTTACTaGCCCTCTGCGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMDSAVY*PSAPWE
Trigger: TTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTC...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCGCCTGCTCCTGGCCCTaGCACATGTTGTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIACSWP*HMLSLP
Trigger: CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGC...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACTCAACAGCTTCTCCTTaGTCTGACACCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHSTASP*SDTMEA
Trigger: GGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCACGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNARAASA*EDAASR
Trigger: CCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCG...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTCCAACAGCAGGACGTTTCAGATGCTaGCGCTGGGGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGCRLRSCCHMGLEPPTAGRFRC*RWGPPG
Trigger: TCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCC...TGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CACCAAAGGGACAGGGGCTTTCAGGAGTCACACCAGATCACGCTTGGGACCTTTGACAGCAGGGCGCCCTaGTGCCGGTGGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HQRDRGFQESHQITLGTFDSRAP*CRWESS
Trigger: GCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTC...AAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGAAAGCCCCTGTCCCTTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGGGCAGAGGAGCCCTGCCCTCCTGCCCTCCAAGTGTaGATGCCCACCAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: MGCGSPGPEPRRAEEPCPPALQV*MPTKGT
Trigger: TGTCCCTTTGGTGGGCATGCACACTTGGAGGGCAGG...AGGGCAGGGCTCCTCTGCCCTACGTGGTTCTGGCCCAGGGGAACCACATCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACCTCCACGGGCGATaGATCCGTATGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMHLHGR*IRMTSS
Trigger: AGAAGATGTCATACGGATCCATCGCCCGTGGAGGTG...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGCTGCAGCTTGCTCTCTaGCGACGGGCAGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: DKPQRFIRVLSWGRHRGELQLAL*RRAGEM
Trigger: CATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAG...CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp CCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACC +
Preference number: 4 (lower is better)
Translates to: PSGLLDWSCPGALETQSLSWNSS*RLHGST
Trigger: GGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGA...CAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGTTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMLADIS*NSSWRL
Trigger: CAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAA...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVLADIS*NSSWRL
Trigger: CAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGTGGCGCTGGCTGCAATaGTCTTGTTGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMWRWLQ*SCWSPA
Trigger: AGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCA...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCGCTCCAGCCAGGAGCTaGCGGGCTGCCTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPAPARS*RAASAC
Trigger: GCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGC...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAAGGGGTGCTCGGGGCTaGAGAGCCCACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNARGARG*RAHTTA
Trigger: GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCT...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTACGGATCGACCTGGGTaGCTAGGGGCTGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTTDRPG*LGADSL
Trigger: AAGGCTGTCAGCCCCTAGCCACCCAGGTCGATCCGT...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCGAGTGGGTGCCCTTGGGTCCTCCTCATCAGTTaGTGCCGGCTGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PPSRSSLRRPRAPSGCPWVLLIS*CRLAPA
Trigger: GGCTGGAGCCAGCCGGCACCAACTGATGAGGAGGAC...CCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AATGCGGACGTTTCAGATGCTGCCGCTGGGGTCCTCCTGGAGGGCAAGGGAGGTGCAGCCACAAGCAGCTaGGGGTCTCGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NADVSDAAAGVLLEGKGGAATSS*GSRPPH
Trigger: ATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGC...ACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp ACCCCCGACCAGCCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGCCATCGGCCAGACGCTaGCTCTGCTCGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TPDQPYISSSTFKIIPEKPSARR*LCSASR
Trigger: GCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGG...CTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGGCTGGTCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGGAGGTGGGTGCGTGGAAGACTCCTCGTAAGTCCAGGGGGTCAGGTTCAGGCATCCGGTCTCCTGGACTaGAGTTGTCCCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRWVRGRLLVSPGGQVQASGLLD*SCPGAL
Trigger: CAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGA...TGCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGCGATGGATCCGTATaGCATCTTCTTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHGDGSV*HLLTDG
Trigger: GCCATCTGTAAGAAGATGTCATACGGATCCATCGCC...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp CCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCAGCCTCGGCGATGGATCCGTATaGCATCTTCTTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: PSWSEGEASRVGRASTSLGDGSV*HLLTDG
Trigger: GCCATCTGTAAGAAGATGTCATACGGATCCATCGCC...GAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGAAGTCCTTGATGATCTaGTTCACATCCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQKSLMI*FTSSKL
Trigger: CAACTTGCTGGATGTGAATCAGATCATCAAGGACTT...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCACACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNAHTTAS*RFSGRC
Trigger: GCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTG...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCTCTCGAGGGTCCGGTTaGGGGCCTCCACGCCATCGG +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLSRGSG*GPPRHR
Trigger: CCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGA...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCCTGTCCCGAAGCTCCTaGGTGTCACTCGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSILSRSS*VSLGVP
Trigger: AGGGACACCGAGTGACACGCAGGAGCTTCGGGACAG...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCTCCGGGAGCAGCGCCTaGTCCTGGCCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLSGSSA*SWPCHM
Trigger: CATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGA...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp GGGAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGAAGTTGCTCTCCATCTaGAGGATGGCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GSPAAAAQMRTFQMLPLGKLLSI*RMASSR
Trigger: GCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTT...CCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCAAGTTGCTCTCCATCTaGAGGATGGCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSKLLSI*RMASSR
Trigger: GCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTT...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTGTCTCTGGAGTTGGTaGCGGCTGGCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISCLWSW*RLAPAR
Trigger: CCTGGCTGGAGCCAGCCGGCACCAACTCCAGAGACA...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp CCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTCAGCTGCTGCTCAAATaGGGACGTTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLGCRLRSCCHMGLEPQLLLK*GRFRCC
Trigger: GCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTG...AGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGGGCAGAGGAGCCCTGCCCTTCTGCAGCCTTTCCCTaGAGGTCACCACCCTCTACA +
Preference number: 4 (lower is better)
Translates to: MGCGSPGPEPRRAEEPCPSAAFP*RSPPST
Trigger: TGTAGAGGGTGGTGACCTGCAGGGAAAGGCTGCAGA...AGGGCAGGGCTCCTCTGCCCTACGTGGTTCTGGCCCAGGGGAACCACATCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTAATAGGCGTGCCTGCTaGCCCCAGATCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ISHSGLFGCSAGADTGASNRRAC*PQITFP
Trigger: GGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATT...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATTGCACGGATCGACCTaGGTGGCTCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNALHGST*VALGGS
Trigger: GGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCTCACGGAGCTGGCGCTaGCTGCAATGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSSRSWR*LQWSCW
Trigger: CCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGA...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCTCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSSASRS*RWLQWS
Trigger: AGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCACCTCCCGCAGCCGGATaGCCTCCAGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNAPPAAG*PPGPLQ
Trigger: CTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGG...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACATTCGGGTGCTCAGCTaGGGCCGACACAGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNIRVLS*GRHRGE
Trigger: CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAAT...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR TCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCAGGTCACACTGGAGTTaGTTCGGAAGACGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSRSHWS*FGRRWP
Trigger: CGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCT...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp CTGGGCTGCAGACTTCGCAGCTGCTGCCACATGGGGTTGGAGCCTCCAACAGCAGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGCRLRSCCHMGLEPPTAALNGI*ELGFQP
Trigger: CGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGC...TGCTGTTGGAGGCTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCCCATTGCAGGCCAAGTaGCGGCATCAGCTGACAACG +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIPLQAK*RHQLTT
Trigger: CGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGG...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCGACAGCAGGCAGCTGTaGAGCTCTCGGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISDSRQL*SSRVHC
Trigger: GCAATGGACCCGAGAGCTTCACAGCTGCCTGCTGTC...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNSSSAI*FTELAL
Trigger: CAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCT...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCGACTCTGCTGTTTACTaGCCCTCTGCGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSDSAVY*PSAPWE
Trigger: TTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTC...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000520166.5
CDS-3UTR GCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAAGTTGCTCTCCATCTaGAGGATGGCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIKLLSI*RMASSR
Trigger: GCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTT...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATGTCTCTGGAGTTGGTaGCGGCTGGCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNACLWSW*RLAPAR
Trigger: CCTGGCTGGAGCCAGCCGGCACCAACTCCAGAGACA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACTGTCTCTGGAGTTGGTaGCGGCTGGCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNCLWSW*RLAPAR
Trigger: CCTGGCTGGAGCCAGCCGGCACCAACTCCAGAGACA...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTAGCTCTCGGGTCCATTaGAGGCCAAGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: ISHSGLFGCSAGADTGASSSRVH*RPSDGI
Trigger: GATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCT...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCAATAGGCGTGCCTGCTaGCCCCAGATCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISNRRAC*PQITFP
Trigger: GGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGGTGCCAAACAGCAGCTaGTGGTGCTTGCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: DKPQRFIRVLSWGRHRGEVPNSS*WCLLTL
Trigger: CAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCAC...CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCACCAGCCTCTCGAGGGTCCGGTTGAGGGCCTCCACGCCATCGGCCAGACGCTGGGAAGCAGCGCTCTaGACTTTTCTGCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: STSLSRVRLRASTPSARRWEAAL*TFLQFS
Trigger: AGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCA...GCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGTCTCGGCAAACGGGGCCTaGGGACTCTGCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: ESSSCCSNADVSDAAAGVSANGA*GLCCLL
Trigger: CAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGA...GACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCCCTCCCGCAGCCGGATaGCCTCCAGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPPPAAG*PPGPLQ
Trigger: CTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGG...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCGAGGGCGGGGAAGGCTaGAAGGCCCCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLEGGEG*KAPMSV
Trigger: CACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTC...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp ATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGGGCAGAGGAGCCCTGCCCTGACCTTTTTAGAGCCTaGCTGAGCCACCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MGCGSPGPEPRRAEEPCPDLFRA*LSHPFQ
Trigger: CTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAAGGTC...AGGGCAGGGCTCCTCTGCCCTACGTGGTTCTGGCCCAGGGGAACCACATCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGACGCTGGCTCTGCTCGGCCAGCCGCTGCAGCAGCAGGTTTTGCTGGGCCATGATTATTCCAGGCATATaGGATGTGGTTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRWLCSASRCSSRFCWAMIIPGI*DVVPLG
Trigger: GCCCAGGGGAACCACATCCCATATGCCTGGAATAAT...CATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGCACTCTAGGGGCTaGCAGCCTTGTCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNAAHSRG*QPCLEG
Trigger: ACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGC...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCCCATTGCAGGCCAAGTaGCGGCATCAGCTGACAACG +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISPLQAK*RHQLTT
Trigger: CGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGG...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGACAGCAGGCAGCTGTaGAGCTCTCGGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNDSRQL*SSRVHC
Trigger: GCAATGGACCCGAGAGCTTCACAGCTGCCTGCTGTC...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp CACCAAAGGGACAGGGGCTTTCAGGAGTCACACCAGATCACGCTTGGGACCTTTGTTGGTCTCCTGCTGTaGCGTGTGCAGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: HQRDRGFQESHQITLGTFVGLLL*RVQAVP
Trigger: CGGGACAGCCTGCACACGGCACAGCAGGAGACCAAC...AAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGAAAGCCCCTGTCCCTTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ACCCCCGACCAGCCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TPDQPYISSSTFKIIPEKSSSAI*FTELAL
Trigger: CAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCT...CTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGGCTGGTCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTGTTTACTGCCCCTCTaGGCCATGGGAAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISCLLPL*AMGSSA
Trigger: AGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACA...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCGACTCTGCTGTTTACTaGCCCTCTGCGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIDSAVY*PSAPWE
Trigger: TTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTC...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000520166.5
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCAAGTTGCTCTCCATCTaGAGGATGGCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISKLLSI*RMASSR
Trigger: GCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp GATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTCAACAGCTTCTCCTTaGTCTGACACCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DKPQRFIRVLSWGRHRGESTASP*SDTMEA
Trigger: GGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA...CTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp ACCCCCGACCAGCCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGGCCATGAGTGTGCTCTaGTGCTGGGCCCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TPDQPYISSSTFKIIPEKAMSVL*CWAQED
Trigger: GTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGC...CTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGGCTGGTCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CACCAAAGGGACAGGGGCTTTCAGGAGTCACACCAGATCACGCTTGGGACCTTTTTCCCGGGTAGGGCGTaGTTCCACCAGCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: HQRDRGFQESHQITLGTFFPGRA*FHQPLE
Trigger: CTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAA...AAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGAAAGCCCCTGTCCCTTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATCGCTTCCTGGCCCTTaGGACAATAGGCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNASLPGP*DNRRAC
Trigger: GCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISSWNSS*RLHGST
Trigger: GGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGA...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCTTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSILADIS*NSSWRL
Trigger: CAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAA...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LGSIAGQVTASADNAADSLQWSC*SPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAG...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCTGGCGCTGGCTGCAATaGTCTTGTTGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSIWRWLQ*SCWSPA
Trigger: AGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCA...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTATGGCATCTGAGAGCTaGGTTTTCAGCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISHSGLFGCSAGADTGASMASES*VFSRSS
Trigger: GCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCAT...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGACGCAGCCTCAAGGCTaGCTTCAATACTATCAACAG +
Preference number: 4 (lower is better)
Translates to: TASADNAADSISSQLRARTQPQG*LQYYQQ
Trigger: CTGTTGATAGTATTGAAGCCAGCCTTGAGGCTGCGT...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATTGTGTCTCTGGAGTTaGTGCCGGCTGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNALCLWS*CRLAPA
Trigger: GGCTGGAGCCAGCCGGCACCAACTCCAGAGACACAA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCAGGAGTCACACCAGATCACGCTTGGGACCTTTTTAGAGCCTGGCTGAGCCACGTTGTCCCGGTGCCCTaGAGACCCAGTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SGVTPDHAWDLFRAWLSHVVPVP*RPSHCH
Trigger: GTGGCAGTGACTGGGTCTCCAGGGCACCGGGACAAC...GTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GCCCTCCAAGTGTGCATGCCCACCAAAGGGACAGGGGCTTTCAGGAGTCACACCGCTGCCACATGGGGTTaGAGCCTCCAACAGCATCAT +
Preference number: 4 (lower is better)
Translates to: ALQVCMPTKGTGAFRSHTAATWG*SLQQHH
Trigger: ATGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGC...GGTGTGACTCCTGAAAGCCCCTGTCCCTTTGGTGGGCATGCACACTTGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TCAGGAGTCACACCAGATCACGCTTGGGACCTTTTTAGAGCCTGGCTGAGCCACGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SGVTPDHAWDLFRAWLSHGVPKD*RLRSKE
Trigger: CTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACC...GTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACAAGTCCTTGATGATCTaGTTCACATCCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SGLESPHHSQLTVQRPMHKSLMI*FTSSKL
Trigger: CAACTTGCTGGATGTGAATCAGATCATCAAGGACTT...GTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR TCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCTTTCCAGAGTTCCAGTaGGCAGGGGGCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPFPEFQ*AGGPSV
Trigger: CACTGAGGGGCCCCCTGCTCACTGGAACTCTGGAAA...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCAACAGCAGCTGGTGGTaGTTGCTCACCTTGGACACC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISNSSWW*LLTLDT
Trigger: GGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACAGGTCCCGCCACTTGTaGTTCAGGTCCACAACGTCG +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNRSRHL*FRSTTS
Trigger: CGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCT...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR GCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGTCTTGTTGGTCTCCTaGTGTGCCGTGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNAVLLVS*CAVCRL
Trigger: CAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSILQWSC*SPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAG...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACTCACGGAGCTGGCGCTaGCTGCAATGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNSRSWR*LQWSCW
Trigger: CCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGA...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNASASRS*RWLQWS
Trigger: AGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCATGGCATCTGAGAGCTaGGTTTTCAGCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISMASES*VFSRSS
Trigger: GCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCAT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTATGGGAAGCAGCGCTCTaGACTTTTCTGCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: AGEPTPQPADGSAADARVWEAAL*TFLQFS
Trigger: AGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCA...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp GGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCTTGATCTTGTGTCTCTaGAGTTGGTGCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSIAGQVTASADNAADSILILCL*SWCRLA
Trigger: AGCCAGCCGGCACCAACTCCAGAGACACAAGATCAA...GATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCTGCTTCCAGGGACGCTaGGCTGCAGACTTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPCFQGR*AADFAA
Trigger: AGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCA...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp GGGAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGACACCAGATCACGCTTaGGACCTTTTTAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPAAAAQMRTFQMLPLGTPDHA*DLFRAW
Trigger: CCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGT...CCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAAGCTTCTCCTTGCTCTaGCACCATGGAGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNASFSLL*HHGGQV
Trigger: GACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCT...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR GCA 90 bp ACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCATCTGCAGACTTCGCAGCTaGTGCCACATGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TGNGKDATSQVDSPHPLICRLRS*CHMGLE
Trigger: CTCCAACCCCATGTGGCAGCAGCTGCGAAGTCTGCA...GATGAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TGGATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGACGCAGCCTCAAGGCTaGCTTCAATACTATCAACAG +
Preference number: 4 (lower is better)
Translates to: WISHSGLFGCSAGADTGATQPQG*LQYYQQ
Trigger: CTGTTGATAGTATTGAAGCCAGCCTTGAGGCTGCGT...CGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524325.6
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCGAGGAGGTGGGTGCGTaGAAGACTCCTCGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPEEVGA*KTPRKS
Trigger: GGACTTACGAGGAGTCTTCCACGCACCCACCTCCTC...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp CCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGAAGTCCTTGATGATCTaGTTCACATCCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PSGLLDWSCPGALETQSLKSLMI*FTSSKL
Trigger: CAACTTGCTGGATGTGAATCAGATCATCAAGGACTT...CAGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCTGGGAGTCCAGCAGCTaGTGCTCAAATGCGGACGTT +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLWESSS*CSNADV
Trigger: AACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCA...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCTGCAGCAGCAGGTTTTaGTGGGCCATGAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPCSSRF*WAMSVL
Trigger: GAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCA...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp AGCTGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SCEALGSIAGQVTASADNLQWSC*SPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAG...GTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CCA 90 bp AGCCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCTCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SPISPPPPSRSSLRRPRASASRS*RWLQWS
Trigger: AGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA...GGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCTCAACAGCTTCTCCTTaGTCTGACACCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLSTASP*SDTMEA
Trigger: GGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ATAGAAATTATTCCAGGCATATGGGATGTGGTTCCCCTGGGCCAGAACCACGTACTCCTCATCAGTTGGTaGCGGCTGGCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IEIIPGIWDVVPLGQNHVLLISW*RLAPAR
Trigger: CCTGGCTGGAGCCAGCCGGCACCAACTGATGAGGAG...TACGTGGTTCTGGCCCAGGGGAACCACATCCCATATGCCTGGAATAATTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCCACCTCCACGGGCGATaGATCCGTATGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPHLHGR*IRMTSS
Trigger: AGAAGATGTCATACGGATCCATCGCCCGTGGAGGTG...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCACCCTCTACAGGCAATaGCAAGGACGCGACATCACA +
Preference number: 4 (lower is better)
Translates to: STGNGKDATSQVDSPHPLTLYRQ*QGRDIT
Trigger: TGTGATGTCGCGTCCTTGCCATTGCCTGTAGAGGGT...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp ACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCATCTTTTTAGAGCCTGGCTaGGCCACCCTTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TGNGKDATSQVDSPHPLIFLEPG*ATLSRV
Trigger: AACTCTGGAAAGGGTGGCTCAGCCAGGCTCTAAAAA...GATGAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR GCA 90 bp ATAGAAATTATTCCAGGCATATGGGATGTGGTTCCCCTGGGCCAGAACCACGTACACAGGTCGGCTCTCTaGAGCCTTTCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IEIIPGIWDVVPLGQNHVHRSAL*SLSLQV
Trigger: GACCTGCAGGGAAAGGCTGCAGAGAGCCGACCTGTG...TACGTGGTTCTGGCCCAGGGGAACCACATCCCATATGCCTGGAATAATTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CCA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTGGGAAGCAGCGCTCTaGACTTTTCTGCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: SIAGQVTASADNAADSISWEAAL*TFLQFS
Trigger: AGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCA...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp CCCTATATCTCCTCCTCCACCTTCAAGATCATCCCTGAGAAGACCTCGAGCCCCACGCAGCCTCAAGGCTaGCTTCAATACTATCAACAG +
Preference number: 4 (lower is better)
Translates to: PYISSSTFKIIPEKTSSPTQPQG*LQYYQQ
Trigger: CTGTTGATAGTATTGAAGCCAGCCTTGAGGCTGCGT...GGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR TCA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAAAGTCCTTGATGATCTaGTTCACATCCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: CEALGSIAGQVTASADNAKSLMI*FTSSKL
Trigger: CAACTTGCTGGATGTGAATCAGATCATCAAGGACTT...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CCA 90 bp ATAGAAATTATTCCAGGCATATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAATGGCATCTGAGAGCTaGGTTTTCAGCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IEIIPGIWDVVPLGQNHVMASES*VFSRSS
Trigger: GCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCAT...TACGTGGTTCTGGCCCAGGGGAACCACATCCCATATGCCTGGAATAATTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS CCA 90 bp GTGAGAGCCAGGGCCTGGGGCTTGCCGGAACCAGGGCTGGGGCCATaGGCCGCCTTCCGGAGGTCGCCCAGCTTGCGCCGCACGACGGCT +
Preference number: 5 (lower is better)
Translates to: VRARAWGLPEPGLGP*AAFRRSPSLRRTTA
Trigger: AGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 90 bp CTGCCTGCAGGATGCGGCTCCACACGCGGTGCTTTCGGGCAGGTGTaGCCCGCAGCGCCCCGAACAGCAGCGGGTAGTGGCGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: LPAGCGSTRGAFGQV*PAAPRTAAGSGAAP
Trigger: GGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 90 bp CCAGGTCGCGGCGGCAGTAGCCCAGCGCGTTCACTGCCTGCAGGATaGGGCTCCACACGCGGTGCTTTCGGGCAGGTGTGCCCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: PGRGGSSPARSLPAG*GSTRGAFGQVCPAA
Trigger: CGCTGCGGGGCACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CCA 90 bp AAGGTCTTGGCCACCACCTGCTCCACGGGCGTGAGAGCCAGGGCCTaGGGCTTGCCGGAACCAGGGCTGGGGCCATGGGCCGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: KVLATTCSTGVRARA*GLPEPGLGPWAAFR
Trigger: CCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS-3UTR CAA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCGGAGGTCGCCCAGCTaGCGCCGCACGACGGCTCGT +
Preference number: 5 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRRRSPS*RRTTAR
Trigger: ACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCG...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCGGAGGTCGCCCAGCTaGCGCCGCACGACGGCTCGT +
Preference number: 5 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVRRSPS*RRTTAR
Trigger: ACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS TCA 90 bp AGTGGCGCCGCACCCTCTGCACCAGCACCTCCGTCTCCTGGGGGCTaGAGTTGGGCTTGCGTGTCTTGGTGCGGGAGTGGGGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SGAAPSAPAPPSPGG*SWACVSWCGSGGPA
Trigger: GGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 90 bp CCCTCGGAGGGCAGGGCCTGGCAAGAGAAGGTCTTGGCCACCACCTaGTCCACGGGCGTGAGAGCCAGGGCCTGGGGCTTGCCGGAACCA +
Preference number: 5 (lower is better)
Translates to: PSEGRAWQEKVLATT*STGVRARAWGLPEP
Trigger: TGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp GCCCAGCAGCCGAGTCCTTCCTCGGGCCAATGGTGGGTGATGAGGTaGGCTCCGGCATCCGGCTGCCTTCAGGGGCAACCCCAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: AQQPSPSSGQWWVMR*APASGCLQGQPQAL
Trigger: GAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp CCATCCGGCCATGGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATaGTGGGTGATGAGGTGGGCTCCGGCATCCGGCTGCCTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: PSGHGAQQPSPSSGQ*WVMRWAPASGCLQG
Trigger: CCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS-3UTR CAA 90 bp TCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACCAGCGGTTCTGCAGCTaGCTCTCTGGCGACGGGCAG +
Preference number: 5 (lower is better)
Translates to: SGPGGVLGAGEPTPQPADQRFCS*LSGDGQ
Trigger: CTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTG...GTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCCTTGTGTCTCTGGAGTaGGTGCCGGCTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SQLRARRGARGWRAHTTALVSLE*VPAGSS
Trigger: GCTGGAGCCAGCCGGCACCAACTCCAGAGACACAAG...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS GCA 90 bp TCCTCGGGCCAATGGTGGGTGATGAGGTGGGCTCCGGCATCCGGCTaGCTTCAGGGGCAACCCCAGGCCCTCGCTTCCTGGCCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: SSGQWWVMRWAPASG*LQGQPQALASWPLG
Trigger: TCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 90 bp CTTGAGGTCCCCCAGGTCGCGGCGGCAGTAGCCCAGCGCGTTCACTaGCTGCAGGATGCGGCTCCACACGCGGTGCTTTCGGGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: LEVPQVAAAVAQRVH*LQDAAPHAVLSGRC
Trigger: ACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CCA 90 bp TCCGGCCATGGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATGGTaGGTGATGAGGTGGGCTCCGGCATCCGGCTGCCTTCAGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SGHGAQQPSPSSGQW*VMRWAPASGCLQGQ
Trigger: TTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp CTCGTCCTCCTCATCAGTTGGTGCCGGCTGGCTCCAGCCAGGAGCTaGCGGGCTGCCTCCGCATGCGAGGACGCAGCCTCAAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LVLLISWCRLAPARS*RAASACEDAASRLA
Trigger: AGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTGATGAGGAGGACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519651.5
ENST00000521825.1
CDS-3UTR CAA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGTTCTGCAGCTaGCTCTCTGGCGACGGGCAG +
Preference number: 5 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVQRFCS*LSGDGQ
Trigger: CTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCGTAGGTCCCGCCACTaGTGCTTCAGGTCCACAACG +
Preference number: 5 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQRRSRH*CFRSTT
Trigger: CGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACG...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCTGGCAAGAGAAGGTCTaGGCCACCACCTGCTCCACG +
Preference number: 5 (lower is better)
Translates to: SQLRARRGARGWRAHTTAWQEKV*ATTCST
Trigger: CGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCA...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS TCA 90 bp CCAGCTTCTTGCGCACAGCACCTCGCAGGTCCCGCCACTTGTGCTTaGGGTCCCCCAGGTCGCGGCGGCAGTAGCCCAGCGCGTTCACTG +
Preference number: 5 (lower is better)
Translates to: PASCAQHLAGPATCA*GPPGRGGSSPARSL
Trigger: CAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 90 bp CAACGTCGCGGCGACAGTAGCCCAGCGCATTCACGGCCTGCAGGATaGGGCTCCACACGCGGTACCTGCGAGTGGGCTCGGCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: QRRGDSSPAHSRPAG*GSTRGTCEWARPSA
Trigger: TGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp TTCCTCTTCTTGGCCCGGGTAGTGCTGGGCCCCGCCATCCGGCCATaGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATGGTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: FLFLARVVLGPAIRP*GPAAESFLGPMVGD
Trigger: ATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp ACATTTCCAATGTGCCAAAAATTGTCCCAGGACACTGGGCCTCGGTaGCTCGCGGACCGCTCCGGGCGCTCACGGCGGGCGAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TFPMCQKLSQDTGPR*LADRSGRSRRARRA
Trigger: CGCCCGCCTCGCCCGCCGTGAGCGCCCGGAGCGGTCCGCGAGCCACCGAGGCCCAGTGTCCTGGGACAATTTTTGGCACATTGGAAATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518720.5
CDS-3UTR CAA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGGCTGCAATGGTCTTGTaGGTCTCCTGCTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQAAMVL*VSCCAV
Trigger: CACGGCACAGCAGGAGACCAACAAGACCATTGCAGC...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCCTGGCTGCAATGGTCTaGTTGGTCTCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SQLRARRGARGWRAHTTALAAMV*LVSCCA
Trigger: GGCACAGCAGGAGACCAACAAGACCATTGCAGCCAG...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGGCTGCAATGGTCTaGTTGGTCTCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQLAAMV*LVSCCA
Trigger: GGCACAGCAGGAGACCAACAAGACCATTGCAGCCAG...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACGTCCTCCTCATCAGTaGGTGCCGGCTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPRPPHQ*VPAGSS
Trigger: GCTGGAGCCAGCCGGCACCAACTGATGAGGAGGACG...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCCTCTCGAGGGTCCGGTaGAGGGCCTCCACGCCATCG +
Preference number: 5 (lower is better)
Translates to: GLPSWSEGEASRVGRASTLSRVR*RASTPS
Trigger: CGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAG...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS TCA 90 bp GGATGGCCTCCTCCCGCAGCCGGATGGCCTCCAGGTCCTCTTCAGTaGTGTCCGGGAGCAGCGCCTGCTCCTGGCCCTGCCACATGTTGT +
Preference number: 5 (lower is better)
Translates to: GWPPPAAGWPPGPLQ*CPGAAPAPGPATCC
Trigger: ACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp ATCTTGTGTCTCTGGAGTTGGTGCCGGCTGGCTCCAGCCAGGAGCTaGCGGGCTGCCTCCGCATGCGAGGACGCAGCCTCAAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ILCLWSWCRLAPARS*RAASACEDAASRLA
Trigger: AGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTCCAGAGACACAAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGCACGGGTACAGCGGTTCTGCAGCTaGCTCTCTGGCGACGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGEPTPQPADGSAADARVQRFCS*LSGDGQ
Trigger: CTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTG...TACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGTTGGGCTTCCTCTTCTaGGCCCGGGTAGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMLGFLF*ARVVLG
Trigger: GCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAA...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCGTAGGTCCCGCCACTaGTGCTTCAGGTCCACAACG +
Preference number: 5 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVRRSRH*CFRSTT
Trigger: CGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACG...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCGAGGTCACACTGGAGTaGATTCGGAAGACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SQLRARRGARGWRAHTTAEVTLE*IRKTLA
Trigger: GGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGCTGCAATGGTCTTGTaGGTCTCCTGCTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPAAMVL*VSCCAV
Trigger: CACGGCACAGCAGGAGACCAACAAGACCATTGCAGC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGTGGCCCTGCCACATGTaGTCACTCCCGTTAAAGACC +
Preference number: 5 (lower is better)
Translates to: PAPGQEGCSGLESPHHSQWPCHM*SLPLKT
Trigger: GGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCA...CTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS GCA 90 bp TGCAGACGCTCCTGCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRRSCGQELRSSSAI*FTELALAAMVLLVS
Trigger: GGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 90 bp TGCTGCAGACGCTCCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: CCRRSGQELRSSSAI*FTELALAAMVLLVS
Trigger: GGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGGAGCGTCTGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS GCA 90 bp CCTCATCAGTTGGTGCCGGCTGGCTCCAGCCAGGAGCTGGCGGGCTaGCTCCGCATGCGAGGACGCAGCCTCAAGGCTGGCTTCAATACT +
Preference number: 5 (lower is better)
Translates to: PHQLVPAGSSQELAG*LRMRGRSLKAGFNT
Trigger: AGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAACTGATGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519651.5
ENST00000521825.1
CDS GCA 90 bp TGGTGCCGGCTGGCTCCAGCCAGGAGCTGGCGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGGCTGGCTTCAATACTATTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: WCRLAPARSWRAASA*EDAASRLASILFGR
Trigger: CCTGCCAAATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521825.1
ENST00000662555.1
CDS CCA 90 bp GCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCTTGTTGGTCTCCTGCTGTGCCGTGT +
Preference number: 5 (lower is better)
Translates to: AGRSCAAARPSASRS*RWLQWSCWSPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp CCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCTTGTTGGTCTCCTGCTGTGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PGRSCAAARPSASRS*RWLQWSCWSPAVPC
Trigger: ACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTTGGGCTTCCTCTTCTaGGCCCGGGTAGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TASADNAADSISSQLRARLGFLF*ARVVLG
Trigger: GCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCACGTAGGTCCCGCCACTaGTGCTTCAGGTCCACAACG +
Preference number: 5 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSRRSRH*CFRSTT
Trigger: CGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACG...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS GCA 90 bp GCTGCGCAGCAGCTCGGCCATCTGCTTCACGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTCCTGCTGTGCCGTGTGCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AAQQLGHLLHGAGAG*NGLVGLLLCRVQAV
Trigger: GACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 90 bp TGGTGCCGGCTGGCTCCAGCCAGGAGCTGGCGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGGCTGGCTTCAATACTATCAACAGCT +
Preference number: 5 (lower is better)
Translates to: WCRLAPARSWRAASA*EDAASRLASILSTA
Trigger: AGCTGTTGATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
CDS GCA 90 bp GCTGCGCAGCAGCTCGGCCATCTGCTTCACGGAGCTGGCGCTGGCTaGAATGGTCTTGTTGGTCTCCTGCTGTGCCGTGTGCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: AAQQLGHLLHGAGAG*NGLVGLLLCRVPAP
Trigger: TGGTGCTGGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS-3UTR CAA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGAGGTCACACTGGAGTaGATTCGGAAGACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EGCSGLESPHHSQLTVQREVTLE*IRKTLA
Trigger: GGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CCCACCTCCCCTGCTTCCAGGGACGCTGGGCTGCAGACTTCGCAGCTGCTGCCACTGCAGCAGCAGGTTTaGCTGGGCCATGAGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PTSPASRDAGLQTSQLLPLQQQV*LGHECA
Trigger: AGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAG...TGGCAGCAGCTGCGAAGTCTGCAGCCCAGCGTCCCTGGAAGCAGGGGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS CCA 90 bp TCAGCAGCCCCGTGCCAAACAGCAGCTGGTGGTGCTTGCTCACCTTaGACACCAGCACCTCGGTCTCCTGCGGGCAGAAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SAAPCQTAAGGACSP*TPAPRSPAGRSWAS
Trigger: GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS-3UTR CAA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGGAGGTCACACTGGAGTaGATTCGGAAGACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQEVTLE*IRKTLA
Trigger: GGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCCTTGTGTCTCTGGAGTaGGTGCCGGCTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGSIAGQVTASADNAADSLVSLE*VPAGSS
Trigger: GCTGGAGCCAGCCGGCACCAACTCCAGAGACACAAG...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCCAGCTCCGGGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCGATAGGAAGCAGCACTaGATCTTGTGTCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SQLRARRGARGWRAHTTADRKQH*ILCLWS
Trigger: ACTCCAGAGACACAAGATCAAGTGCTGCTTCCTATC...GGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCCCGGAGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS GCA 90 bp AGCTGGTGGTGCTTGCTCACCTTGGACACCAGCACCTCGGTCTCCTaGGGGCAGAAGTTGGGCTTCCTCTTCTTGGCCCGGGTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SWWCLLTLDTSTSVS*GQKLGFLFLARVVL
Trigger: CAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp ATTTGGCTGAACATTTCCAATGTGCCAAAAATTGTCCCAGGACACTaGGCCTCGGTGGCTCGCGGACCGCTCCGGGCGCTCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: IWLNISNVPKIVPGH*ASVARGPLRALTAG
Trigger: GCCCGCCGTGAGCGCCCGGAGCGGTCCGCGAGCCACCGAGGCCCAGTGTCCTGGGACAATTTTTGGCACATTGGAAATGTTCAGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518720.5
CDS CCA 90 bp AGTTCCAGCCCCTCCAGGTCAAGGGCAAGCAATGGTGCAGCAGGCTaGCACCTGGGCTCCTCTGGTTCCCAGCCTCATGTGGAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SSSPSRSRASNGAAG*HLGSSGSQPHVECG
Trigger: TCCACACTCCACATGAGGCTGGGAACCAGAGGAGCCCAGGTGCCAGCCTGCTGCACCATTGCTTGCCCTTGACCTGGAGGGGCTGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS-3UTR CAA 90 bp CTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCTGGCAAGAGAAGGTCTaGGCCACCACCTGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LGSIAGQVTASADNAADSWQEKV*ATTCST
Trigger: CGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCA...GGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TGGATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAACAGCTCCTGGAGGTaGCACGGATCGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: WISHSGLFGCSAGADTGANSSWR*HGSTWV
Trigger: CACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTT...CGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524325.6
CDS-3UTR CAA 90 bp CCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCATTGATTCGGAAGACGTaGGCCGACATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PGGVLGAGEPTPQPADGSLIRKT*ADISWN
Trigger: GTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAA...TGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGACTACCGTCCTGGAGTGAGGGTGAGGCTTCCCGGGTAGGGCGTGCTTCCACCTGGCCCTGCCACATGTaGTCACTCCCGTTAAAGACC +
Preference number: 5 (lower is better)
Translates to: GLPSWSEGEASRVGRASTWPCHM*SLPLKT
Trigger: GGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCA...GGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp GGCCAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTAAGCAGCACTTGATCTaGTGTCTCTGGAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: GQEGCSGLESPHHSQLTVKQHLI*CLWSWC
Trigger: GCACCAACTCCAGAGACACAAGATCAAGTGCTGCTT...AACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGGATAGGAAGCAGCACTaGATCTTGTGTCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: GCSGLESPHHSQLTVQRPDRKQH*ILCLWS
Trigger: ACTCCAGAGACACAAGATCAAGTGCTGCTTCCTATC...CGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp ATGGGATGTGGTTCCCCTGGGCCAGAACCACGTAGGGCAGAGGAGCCCTGCCCTTGCTGCCACATGGGGTaGGAGCCTCCAACAGCATCA +
Preference number: 5 (lower is better)
Translates to: MGCGSPGPEPRRAEEPCPCCHMG*EPPTAS
Trigger: TGATGCTGTTGGAGGCTCCAACCCCATGTGGCAGCA...AGGGCAGGGCTCCTCTGCCCTACGTGGTTCTGGCCCAGGGGAACCACATCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS GCA 90 bp TTCGGAAGACGTTGGCCGACATCTCCTGGAACAGCTCCTGGAGGTTaGACGGATCGACCTGGGTGGCTAGGGGCTGACAGCCTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: FGRRWPTSPGTAPGG*TDRPGWLGADSLVS
Trigger: CGAGACAAGGCTGTCAGCCCCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS CCA 90 bp GAGTTGATTCGGAAGACGTTGGCCGACATCTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACCTGGGTGGCTCTGGGCGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ELIRKTLADISWNSS*RLHGSTWVALGGSR
Trigger: TCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp GCTTCAATACTATTTGGCAGGGGCTCCGTGGTCTGGCCCTCGCCTTaGGGACCGTGGGCAGAAAAGGTCTCTGCCACCATGCGCTCCACA +
Preference number: 5 (lower is better)
Translates to: ASILFGRGSVVWPSP*GPWAEKVSATMRST
Trigger: TGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAAATAGTATTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521825.1
ENST00000662555.1
CDS-3UTR CAA 90 bp ACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTCCCAGCTCCGGGCCAGGTTGATTCGGAAGACGTaGGCCGACATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TASADNAADSISSQLRARLIRKT*ADISWN
Trigger: GTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAA...CCTGGCCCGGAGCTGGGAGCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCTTCCGGTCTCCTGGACTGGAGTTGTCCCGGTGCCCTGGAGACCCAGTCACTGCTGCAATGGTCTTGTaGGTCTCCTGCTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SFRSPGLELSRCPGDPVTAAMVL*VSCCAV
Trigger: CACGGCACAGCAGGAGACCAACAAGACCATTGCAGC...AGTGACTGGGTCTCCAGGGCACCGGGACAACTCCAGTCCAGGAGACCGGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp TGGATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGCTGGCTGCAATGGTCTaGTTGGTCTCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: WISHSGLFGCSAGADTGALAAMV*LVSCCA
Trigger: GGCACAGCAGGAGACCAACAAGACCATTGCAGCCAG...CGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524325.6
CDS-3UTR CAA 90 bp CAGGAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGTTCACATCCAGCAAGTaGCTCTCCATCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QEGCSGLESPHHSQLTVQFTSSK*LSICRM
Trigger: CATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA...CTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGCCGATGTTCACATCCAGCAAGTaGCTCTCCATCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: CSGLESPHHSQLTVQRPMFTSSK*LSICRM
Trigger: CATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA...CATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCCTTGTGTCTCTGGAGTaGGTGCCGGCTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SIAGQVTASADNAADSISLVSLE*VPAGSS
Trigger: GCTGGAGCCAGCCGGCACCAACTCCAGAGACACAAG...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GAGGGGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTGACGGTTCAGCGGGATAGGAAGCAGCACTaGATCTTGTGTCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EGCSGLESPHHSQLTVQRDRKQH*ILCLWS
Trigger: ACTCCAGAGACACAAGATCAAGTGCTGCTTCCTATC...CCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS CCA 90 bp ACACAGCGGTTCTGCAGCTTGCTCTCTGGCGACGGGCAGGGGAAATaGCGGATTCCATACTCGGTCCAACATCTAGCGCACTCTAGGGGC +
Preference number: 5 (lower is better)
Translates to: TQRFCSLLSGDGQGK*RIPYSVQHLAHSRG
Trigger: GCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS-3UTR CAA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCAACAGCTCCTGGAGGTaGCACGGATCGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SIAGQVTASADNAADSISNSSWR*HGSTWV
Trigger: CACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTT...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS TCA 90 bp AGGCTGTCCCGAAGCTCCTGCGTGTCACTCGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAGGTCACACTGGAGTTGATTCGGAAG +
Preference number: 5 (lower is better)
Translates to: RLSRSSCVSLGVPKD*RLRSKEVTLELIRK
Trigger: CTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp GAGGTCACACTGGAGTTGATTCGGAAGACGTTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTGCACGGATCGACCTGGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EVTLELIRKTLADIS*NSSWRLHGSTWVAL
Trigger: CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp GCCTCCAGGTCCTCTTCAGTGATGTCCGGGAGCAGCGCCTGCTCCTaGCCCTGCCACATGTTGTCACTCCCGTTAAAGACCTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: ASRSSSVMSGSSACS*PCHMLSLPLKTFSS
Trigger: TGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 90 bp GAGGTCACACTGGAGTTGATTCGGAAGACGTTGGCCGACATCTCCTaGAACAGCTCCTGGAGGTTGCACGGATCGACCTGGGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: EVTLELIRKTLADIS*NSSWRLHGSTWVAR
Trigger: CCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCATGGCAAGAGAAGGTCTaGGCCACCACCTGCTCCACG +
Preference number: 5 (lower is better)
Translates to: CEALGSIAGQVTASADNAWQEKV*ATTCST
Trigger: CGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCA...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGTCGAGGTCACACTGGAGTaGATTCGGAAGACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ESSSCCSNADVSDAAAGVEVTLE*IRKTLA
Trigger: GGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTC...GACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCGCTGCAATGGTCTTGTaGGTCTCCTGCTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SIAGQVTASADNAADSISAAMVL*VSCCAV
Trigger: CACGGCACAGCAGGAGACCAACAAGACCATTGCAGC...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS CCA 90 bp TTGGACCAGATGGCCAGAGAGAGGTGGTTAGAATGGGCAAGGCCATaGAGGCCTAGTTCCAGCCCCTCCAGGTCAAGGGCAAGCAATGGT +
Preference number: 5 (lower is better)
Translates to: LDQMARERWLEWARP*RPSSSPSRSRASNG
Trigger: ACCATTGCTTGCCCTTGACCTGGAGGGGCTGGAACTAGGCCTCCATGGCCTTGCCCATTCTAACCACCTCTCTCTGGCCATCTGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS CCA 90 bp GTCTCTCCCTTATTGGACCAGATGGCCAGAGAGAGGTGGTTAGAATaGGCAAGGCCATGGAGGCCTAGTTCCAGCCCCTCCAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: VSPLLDQMARERWLE*ARPWRPSSSPSRSR
Trigger: CCTTGACCTGGAGGGGCTGGAACTAGGCCTCCATGGCCTTGCCCATTCTAACCACCTCTCTCTGGCCATCTGGTCCAATAAGGGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS-3UTR CAA 90 bp TCTACAGGCAATGGCAAGGACGCGACATCACAGGTAGACAGCCCACATCCTCTCAACAGCTCCTGGAGGTaGCACGGATCGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: STGNGKDATSQVDSPHPLNSSWR*HGSTWV
Trigger: CACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTT...GAGAGGATGTGGGCTGTCTACCTGTGATGTCGCGTCCTTGCCATTGCCTGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp ATAAGCCACAGCGGTTTATTCGGGTGCTCAGCTGGGGCCGACACAGGGGCGAGTTTGATTCGGAAGACGTaGGCCGACATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ISHSGLFGCSAGADTGASLIRKT*ADISWN
Trigger: GTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAA...ACTCGCCCCTGTGTCGGCCCCAGCTGAGCACCCGAATAAACCGCTGTGGCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307180.4
ENST00000524325.6
CDS-3UTR CAA 90 bp TCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAGCGGACTCCATCAGCTGGCCCTGCCACATGTaGTCACTCCCGTTAAAGACC +
Preference number: 5 (lower is better)
Translates to: SIAGQVTASADNAADSISWPCHM*SLPLKT
Trigger: GGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCA...GCTGATGGAGTCCGCTGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS-3UTR CAA 90 bp GGGAGTCCAGCAGCTGCTGCTCAAATGCGGACGTTTCAGATGCTGCCGCTGGGGTTCACATCCAGCAAGTaGCTCTCCATCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: GSPAAAAQMRTFQMLPLGFTSSK*LSICRM
Trigger: CATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA...CCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS TCA 90 bp CAGCCTCCTGGAAGTCTAACCACACAGCAAATGAAATGGCCATGGTaGCTGAGAGGCTACCCCAGCATAGACCCCAGCTCCTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: QPPGSLTTQQMKWPW*LRGYPSIDPSSWPE
Trigger: CTCTGGCCAGGAGCTGGGGTCTATGCTGGGGTAGCCTCTCAGTCACCATGGCCATTTCATTTGCTGTGTGGTTAGACTTCCAGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS-3UTR CAA 90 bp TCAGGAGTCACACCAGATCACGCTTGGGACCTTTTTAGAGCCTGGCTGAGCCACTTGATTCGGAAGACGTaGGCCGACATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SGVTPDHAWDLFRAWLSHLIRKT*ADISWN
Trigger: GTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAA...GTGGCTCAGCCAGGCTCTAAAAAGGTCCCAAGCGTGATCTGGTGTGACTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS-3UTR CAA 90 bp TGTGAAGCTCTCGGGTCCATTGCAGGCCAAGTGACGGCATCAGCTGACAACGCAAAGCAGCACTTGATCTaGTGTCTCTGGAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: CEALGSIAGQVTASADNAKQHLI*CLWSWC
Trigger: GCACCAACTCCAGAGACACAAGATCAAGTGCTGCTT...TGCGTTGTCAGCTGATGCCGTCACTTGGCCTGCAATGGACCCGAGAGCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS TCA 90 bp TTCTGCAATTTTCTTCTGCACCACTCCATAGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCGGTCCAGCTGAGGACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: FCNFLLHHSIALNGI*ELGFQPVQLRTLLL
Trigger: CAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS-3UTR CAA 90 bp ATAGAAATTATTCCAGGCATATGGGATGTGGTTCCCCTGGGCCAGAACCACGTACTGGCTGCAATGGTCTaGTTGGTCTCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: IEIIPGIWDVVPLGQNHVLAAMV*LVSCCA
Trigger: GGCACAGCAGGAGACCAACAAGACCATTGCAGCCAG...TACGTGGTTCTGGCCCAGGGGAACCACATCCCATATGCCTGGAATAATTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS TCA 90 bp GACTGTGCAGCTACAGCAGCTGATGGTTTTGTAGAGGAATTTGGCTaGACATTTCCAATGTGCCAAAAATTGTCCCAGGACACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: DCAATAADGFVEEFG*TFPMCQKLSQDTGP
Trigger: AGGCCCAGTGTCCTGGGACAATTTTTGGCACATTGGAAATGTTCAGCCAAATTCCTCTACAAAACCATCAGCTGCTGTAGCTGCACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518720.5
CDS TCA 90 bp CATGTTCATGGACAGGAACACTCAAGACTGTGCAGCTACAGCAGCTaGTGGTTTTGTAGAGGAATTTGGCTGAACATTTCCAATGTGCCA +
Preference number: 5 (lower is better)
Translates to: HVHGQEHSRLCSYSS*WFCRGIWLNISNVP
Trigger: TGGCACATTGGAAATGTTCAGCCAAATTCCTCTACAAAACCATCAGCTGCTGTAGCTGCACAGTCTTGAGTGTTCCTGTCCATGAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518720.5
CDS GCA 72 bp CTGAACAGCGCGCGAGGACCCGCCGAGGGGCTCATGTaGCCGCGGGCCGGTCCCCGAAATGCGGCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: LNSARGPAEGLM*PRAGPRNAALS
Trigger: CGAGAGCGCCGCATTTCGGGGACCGGCCCGCGGGCACATGAGCCCCTCGGCGGGTCCTCGCGCGCTGTTCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520462.5
CDS CAA 72 bp CTGGGGCCATGGGCCGCCTTCCGGAGGTCGCCCAGCTaGCGCCGCACGACGGCTCGTAGGTCCCGCCACTTG +
Preference number: 6 (lower is better)
Translates to: LGPWAAFRRSPS*RRTTARRSRHL
Trigger: CAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 90 bp TTGGCCACCACCTGCTCCACGGGCGTGAGAGCCAGGGCCTGGGGCTaGCCGGAACCAGGGCTGGGGCCATGGGCCGCCTTCCGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: LATTCSTGVRARAWG*PEPGLGPWAAFRRS
Trigger: CGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 90 bp CGCCGCACCCTCTGCACCAGCACCTCCGTCTCCTGGGGGCTGAAGTaGGGCTTGCGTGTCTTGGTGCGGGAGTGGGGGCCCGGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: RRTLCTSTSVSWGLK*GLRVLVREWGPGRR
Trigger: CCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 72 bp TGGGGCCATGGGCCGCCTTCCGGAGGTCGCCCAGCTTaGGCCGCACGACGGCTCGTAGGTCCCGCCACTTGT +
Preference number: 6 (lower is better)
Translates to: WGHGPPSGGRPA*AARRLVGPATC
Trigger: ACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp GGATGCGGCTCCACACGCGGTGCTTTCGGGCAGGTGTaGCCCGCAGCGCCCCGAACAGCAGCGGGTAGTGGC +
Preference number: 6 (lower is better)
Translates to: GCGSTRGAFGQV*PAAPRTAAGSG
Trigger: GCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CCA 72 bp TTGGCCCGGGTAGTGCTGGGCCCCGCCATCCGGCCATaGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATG +
Preference number: 6 (lower is better)
Translates to: LARVVLGPAIRP*GPAAESFLGPM
Trigger: CATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS TCA 72 bp CCTCCCGCAGCCGGATGGCCTCCAGGTCCTCTTCAGTaGTGTCCGGGAGCAGCGCCTGCTCCTGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: PPAAGWPPGPLQ*CPGAAPAPGPA
Trigger: GGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS TCA 72 bp TGCGCACAGCACCTCGCAGGTCCCGCCACTTGTGCTTaGGGTCCCCCAGGTCGCGGCGGCAGTAGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: CAQHLAGPATCA*GPPGRGGSSPA
Trigger: CGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 72 bp GCGTTCACTGCCTGCAGGATGCGGCTCCACACGCGGTaGTTTCGGGCAGGTGTGCCCCGCAGCGCCCCGAAC +
Preference number: 6 (lower is better)
Translates to: AFTACRMRLHTR*FRAGVPRSAPN
Trigger: GTTCGGGGCGCTGCGGGGCACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 72 bp CCCCAGGTCGCGGCGGCAGTAGCCCAGCGCGTTCACTaGCTGCAGGATGCGGCTCCACACGCGGTGCTTTCG +
Preference number: 6 (lower is better)
Translates to: PQVAAAVAQRVH*LQDAAPHAVLS
Trigger: CGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CAA 72 bp ACCAGCACCTCCGTCTCCTGGGGGCTGAAGTTGGGCTaGCGTGTCTTGGTGCGGGAGTGGGGGCCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: TSTSVSWGLKLG*RVLVREWGPGR
Trigger: GCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS GCA 72 bp TCACGGCCTGCAGGATGCGGCTCCACACGCGGTACCTaGGAGTGGGCTCGGCCTTCAGCAGCCCCGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SRPAGCGSTRGT*EWARPSAAPCQ
Trigger: TTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp GGCGGCAGTAGCCCAGCGCGTTCACTGCCTGCAGGATaGGGCTCCACACGCGGTGCTTTCGGGCAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: GGSSPARSLPAG*GSTRGAFGQVC
Trigger: GCACACCTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CCA 72 bp GGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATGGTaGGTGATGAGGTGGGCTCCGGCATCCGGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: GAQQPSPSSGQW*VMRWAPASGCL
Trigger: AAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp CATGGGGCCCAGCAGCCGAGTCCTTCCTCGGGCCAATaGTGGGTGATGAGGTGGGCTCCGGCATCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: HGAQQPSPSSGQ*WVMRWAPASGC
Trigger: GCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp CAATGGTGGGTGATGAGGTGGGCTCCGGCATCCGGCTaGCTTCAGGGGCAACCCCAGGCCCTCGCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: QWWVMRWAPASG*LQGQPQALASW
Trigger: CCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp CGCTCCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: RSGQELRSSSAI*FTELALAAMVL
Trigger: CAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS CCA 72 bp CCGAGTCCTTCCTCGGGCCAATGGTGGGTGATGAGGTaGGCTCCGGCATCCGGCTGCCTTCAGGGGCAACCC +
Preference number: 6 (lower is better)
Translates to: PSPSSGQWWVMR*APASGCLQGQP
Trigger: GGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp TGGCGCCGCACCCTCTGCACCAGCACCTCCGTCTCCTaGGGGCTGAAGTTGGGCTTGCGTGTCTTGGTGCGG +
Preference number: 6 (lower is better)
Translates to: WRRTLCTSTSVS*GLKLGLRVLVR
Trigger: CCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS CAA 72 bp CTCTGCACCAGCACCTCCGTCTCCTGGGGGCTGAAGTaGGGCTTGCGTGTCTTGGTGCGGGAGTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: LCTSTSVSWGLK*GLRVLVREWGP
Trigger: GGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000662555.1
CDS TCA 72 bp GGTGCTCGGGGCTGGAGAGCCCACACCACAGCCAGCTaGCGGTTCAGCGGCCGATGCACGGGTAGCATCACT +
Preference number: 6 (lower is better)
Translates to: GARGWRAHTTAS*RFSGRCTGSIT
Trigger: AGTGATGCTACCCGTGCATCGGCCGCTGAACCGTCAGCTGGCTGTGGTGTGGGCTCTCCAGCCCCGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS GCA 72 bp TCCTGCGGGCAGGAGCTGCGCAGCAGCTCGGCCATCTaGTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SCGQELRSSSAI*FTELALAAMVL
Trigger: CAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp GCCCTCGCCTTGGGGACCGTGGGCAGAAAAGGTCTCTaGCACCATGCGCTCCACAGGTGTGAGGAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: ALALGTVGRKGL*HHALHRCEEEA
Trigger: GGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521825.1
ENST00000662555.1
CDS CCA 72 bp GCCCTTCCAGGGACCTCAGGGGCAGCCACAAGCAGCTaGGGGTCTCGTCCTCCTCATCAGTTGGTGCCGGCT +
Preference number: 6 (lower is better)
Translates to: ALPGTSGAATSS*GSRPPHQLVPA
Trigger: AGCCGGCACCAACTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519651.5
ENST00000521825.1
CDS GCA 72 bp GGTACCTGCGAGTGGGCTCGGCCTTCAGCAGCCCCGTaGCAAACAGCAGCTGGTGGTGCTTGCTCACCTTGG +
Preference number: 6 (lower is better)
Translates to: GTCEWARPSAAP*QTAAGGACSPW
Trigger: CCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp CTGGCTCCAGCCAGGAGCTGGCGGGCTGCCTCCGCATaGGAGGACGCAGCCTCAAGGCTGGCTTCAATACTA +
Preference number: 6 (lower is better)
Translates to: LAPARSWRAASA*EDAASRLASIL
Trigger: TAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000521825.1
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GGCTCGGCCTTCAGCAGCCCCGTGCCAAACAGCAGCTaGTGGTGCTTGCTCACCTTGGACACCAGCACCTCG +
Preference number: 6 (lower is better)
Translates to: GSAFSSPVPNSS*WCLLTLDTSTS
Trigger: CGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GCTGGCACCTGGGCTCCTCTGGTTCCCAGCCTCATGTaGAGTGTGGAGAGTGAGCACGCTTGCCCACGCCAG +
Preference number: 6 (lower is better)
Translates to: AGTWAPLVPSLM*SVESEHACPRQ
Trigger: CTGGCGTGGGCAAGCGTGCTCACTCTCCACACTCCACATGAGGCTGGGAACCAGAGGAGCCCAGGTGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS CAA 72 bp ACGTTGGCCGACATCTCCTGGAACAGCTCCTGGAGGTaGCACGGATCGACCTGGGTGGCTCTGGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: TLADISWNSSWR*HGSTWVALGGS
Trigger: GGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp TCAGCAGCCCCGTGCCAAACAGCAGCTGGTGGTGCTTaGTCACCTTGGACACCAGCACCTCGGTCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: SAAPCQTAAGGA*SPWTPAPRSPA
Trigger: CGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp TCGGCCTTCAGCAGCCCCGTGCCAAACAGCAGCTGGTaGTGCTTGCTCACCTTGGACACCAGCACCTCGGTC +
Preference number: 6 (lower is better)
Translates to: SAFSSPVPNSSW*CLLTLDTSTSV
Trigger: GACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp CGGAAGACGTTGGCCGACATCTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACCTGGGTGGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RKTLADISWNSS*RLHGSTWVALG
Trigger: GCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GCAGCAGCTCGGCCATCTGCTTCACGGAGCTGGCGCTaGCTGCAATGGTCTTGTTGGTCTCCTGCTGTGCCG +
Preference number: 6 (lower is better)
Translates to: AAARPSASRSWR*LQWSCWSPAVP
Trigger: CGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp CGGAAGACGTTGGCCGACATCTCCTGGAACAGCTCCTaGAGGTTGCACGGATCGACCTGGGTGGCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: RKTLADISWNSS*RLHGSTWVARG
Trigger: GCCCCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519651.5
CDS CCA 72 bp CCCTCCAGGTCAAGGGCAAGCAATGGTGCAGCAGGCTaGCACCTGGGCTCCTCTGGTTCCCAGCCTCATGTG +
Preference number: 6 (lower is better)
Translates to: PSRSRASNGAAG*HLGSSGSQPHV
Trigger: CACATGAGGCTGGGAACCAGAGGAGCCCAGGTGCCAGCCTGCTGCACCATTGCTTGCCCTTGACCTGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS CAA 72 bp TTGGACACCAGCACCTCGGTCTCCTGCGGGCAGAAGTaGGGCTTCCTCTTCTTGGCCCGGGTAGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LDTSTSVSCGQK*GFLFLARVVLG
Trigger: GCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 72 bp CCCGTGCCAAACAGCAGCTGGTGGTGCTTGCTCACCTaGGACACCAGCACCTCGGTCTCCTGCGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PVPNSSWWCLLT*DTSTSVSCGQK
Trigger: CTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 90 bp TTCAGCAGCCCCGTGCCAAACAGCAGCTGGTGGTGCTTGCTCACCTaGGACACCAGCACCTCGGTCTCCTGCGGGCAGAAGTTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: FSSPVPNSSWWCLLT*DTSTSVSCGQKLGF
Trigger: GAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS GCA 72 bp TGCTTGCTCACCTTGGACACCAGCACCTCGGTCTCCTaGGGGCAGAAGTTGGGCTTCCTCTTCTTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: CLLTLDTSTSVS*GQKLGFLFLAR
Trigger: CCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp CCGTGCCAAACAGCAGCTGGTGGTGCTTGCTCACCTTaGACACCAGCACCTCGGTCTCCTGCGGGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: PCQTAAGGACSP*TPAPRSPAGRS
Trigger: ACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GCTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGTGCAGGCTGTCCCGAA +
Preference number: 6 (lower is better)
Translates to: ASRSWRWLQWSC*SPAVPCAGCPE
Trigger: TTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp AGCTGCGCAGCAGCTCGGCCATCTGCTTCACGGAGCTaGCGCTGGCTGCAATGGTCTTGTTGGTCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SCAAARPSASRS*RWLQWSCWSPA
Trigger: AGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GGGCTGCCTCCGCATGCGAGGACGCAGCCTCAAGGCTaGCTTCAATACTATTTGGCAGGGGCTCCGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GLPPHARTQPQG*LQYYLAGAPWS
Trigger: AGACCACGGAGCCCCTGCCAAATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521825.1
ENST00000662555.1
CDS CAA 72 bp TTCAGCAGCCCCGTGCCAAACAGCAGCTGGTGGTGCTaGCTCACCTTGGACACCAGCACCTCGGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: FSSPVPNSSWWC*LTLDTSTSVSC
Trigger: GCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 72 bp TGCTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTGTaGGTCTCCTGCTGTGCCGTGTGCAGGCTGTCCCGA +
Preference number: 6 (lower is better)
Translates to: CFTELALAAMVL*VSCCAVCRLSR
Trigger: TCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 90 bp ATTCGGAAGACGTTGGCCGACATCTCCTGGAACAGCTCCTGGAGGTaGCACGGATCGACCTGGGTGGCTCTGGGCGGCTCCAGACTGAAG +
Preference number: 6 (lower is better)
Translates to: IRKTLADISWNSSWR*HGSTWVALGGSRLK
Trigger: CTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GTCCTTCCCCACACAGCGGTTCTGCAGCTTGCTCTCTaGCGACGGGCAGGGGAAATGGCGGATTCCATACTC +
Preference number: 6 (lower is better)
Translates to: VLPHTAVLQLAL*RRAGEMADSIL
Trigger: GAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp GCTTCACGGAGCTGGCGCTGGCTGCAATGGTCTTGTTaGTCTCCTGCTGTGCCGTGTGCCAGCACCAGTGAA +
Preference number: 6 (lower is better)
Translates to: ASRSWRWLQWSC*SPAVPCASTSE
Trigger: TTCACTGGTGCTGGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS CCA 72 bp CAAGGCTGGCTTCAATACTATTTGGCAGGGGCTCCGTaGTCTGGCCCTCGCCTTGGGGACCGTGGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: QGWLQYYLAGAP*SGPRLGDRGQK
Trigger: TTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAAATAGTATTGAAGCCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521825.1
ENST00000662555.1
CDS TCA 72 bp CGAAGCTCCTGCGTGTCACTCGGTGTCCCTAAGGACTaGAGGCTCCGCTCCAAGGAGGTCACACTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: RSSCVSLGVPKD*RLRSKEVTLEL
Trigger: CAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp TCCTCTTCAGTGATGTCCGGGAGCAGCGCCTGCTCCTaGCCCTGCCACATGTTGTCACTCCCGTTAAAGACC +
Preference number: 6 (lower is better)
Translates to: SSSVMSGSSACS*PCHMLSLPLKT
Trigger: GGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp ATGGCCAGAGAGAGGTGGTTAGAATGGGCAAGGCCATaGAGGCCTAGTTCCAGCCCCTCCAGGTCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: MARERWLEWARP*RPSSSPSRSRA
Trigger: TGCCCTTGACCTGGAGGGGCTGGAACTAGGCCTCCATGGCCTTGCCCATTCTAACCACCTCTCTCTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS CAA 90 bp AGGCTCCGCTCCAAGGAGGTCACACTGGAGTTGATTCGGAAGACGTaGGCCGACATCTCCTGGAACAGCTCCTGGAGGTTGCACGGATCG +
Preference number: 6 (lower is better)
Translates to: RLRSKEVTLELIRKT*ADISWNSSWRLHGS
Trigger: CGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS CCA 72 bp TTCTGCAGCTTGCTCTCTGGCGACGGGCAGGGGAAATaGCGGATTCCATACTCGGTCCAACATCTAGCGCAC +
Preference number: 6 (lower is better)
Translates to: FCSLLSGDGQGK*RIPYSVQHLAH
Trigger: GTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518720.5
ENST00000520166.5
ENST00000520462.5
ENST00000524325.6
ENST00000662555.1
CDS CAA 72 bp GCAGTGACTCCAGCTGATAGGAAGCAGCACTTGATCTaGTGTCTCTGGAGTTGGTGCCGGCTGGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: AVTPADRKQHLI*CLWSWCRLAPA
Trigger: GGCTGGAGCCAGCCGGCACCAACTCCAGAGACACAAGATCAAGTGCTGCTTCCTATCAGCTGGAGTCACTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307180.4
ENST00000520166.5
ENST00000524325.6
CDS CAA 72 bp TCCAAGGAGGTCACACTGGAGTTGATTCGGAAGACGTaGGCCGACATCTCCTGGAACAGCTCCTGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: SKEVTLELIRKT*ADISWNSSWRL
Trigger: CAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307180.4
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS TCA 72 bp TTTCTTCTGCACCACTCCATAGCACTGAATGGCATCTaGGAGCTGGGTTTTCAGCCGGTCCAGCTGAGGACG +
Preference number: 6 (lower is better)
Translates to: FLLHHSIALNGI*ELGFQPVQLRT
Trigger: CGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307180.4
ENST00000518928.1
ENST00000519651.5
ENST00000520166.5
ENST00000524325.6
ENST00000662555.1
CDS TCA 72 bp GGAAGTCTAACCACACAGCAAATGAAATGGCCATGGTaGCTGAGAGGCTACCCCAGCATAGACCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSLTTQQMKWPW*LRGYPSIDPSS
Trigger: GGAGCTGGGGTCTATGCTGGGGTAGCCTCTCAGTCACCATGGCCATTTCATTTGCTGTGTGGTTAGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518928.1
CDS TCA 72 bp GGACAGGAACACTCAAGACTGTGCAGCTACAGCAGCTaGTGGTTTTGTAGAGGAATTTGGCTGAACATTTCC +
Preference number: 6 (lower is better)
Translates to: GQEHSRLCSYSS*WFCRGIWLNIS
Trigger: GGAAATGTTCAGCCAAATTCCTCTACAAAACCATCAGCTGCTGTAGCTGCACAGTCTTGAGTGTTCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518720.5