RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSKU (Homo sapiens)

Ensembl gene IDs: ENSG00000182704

Ensembl transcript IDs: ENST00000333090.5, ENST00000525167.1, ENST00000527881.1, ENST00000533752.1, ENST00000612930.1

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCTCCCAGGTCCAAAGCCTCTCCTAGGCCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTGCGGGCTCCCCACTGGTGTTGGCAC +
Preference number: 1 (lower is better)
Translates to: WLPGPKPLLGPQLLW*RCHIGLRAPHWCWH
Trigger: GTGCCAACACCAGTGGGGAGCCCGCAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGGGCCTAGGAGAGGCTTTGGACCTGGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 90 bp CTGGATGCTGGGGGACCCCAACCCAGGGTGAGAAACTGGCTAGGCTaGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: LDAGGPQPRVRNWLG*NQCALSFQRLRRAE
Trigger: CTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGGTTGGGGTCCCCCAGCATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 90 bp TGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTaGCTTAGCCCATGCCGCACAGCTGGTCAGAGGCCCAGAGTCCCA +
Preference number: 1 (lower is better)
Translates to: WNQCALSFQRLRRAE*LSPCRTAGQRPRVP
Trigger: TGGGACTCTGGGCCTCTGACCAGCTGTGCGGCATGGGCTAAGTCACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 90 bp CATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTCCTaGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTGGGGACTG +
Preference number: 1 (lower is better)
Translates to: HRHGSGRPCLLSRHS*EGKKGCRAQGQWGL
Trigger: CAGTCCCCACTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR GCA 90 bp TGGGTCCGGGCTGGGAGGCAGGAGGCTGTGCTCCAGTCATGCCACTaGCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCTCA +
Preference number: 1 (lower is better)
Translates to: WVRAGRQEAVLQSCH*PQELRLAFFLLKAS
Trigger: TGAGGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCCCAGCCCGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 90 bp GCTCCCCACTGGTGTTGGCACATTGAACATAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAGTCTGTTATGTGGCCCTGGGCCACA +
Preference number: 1 (lower is better)
Translates to: APHWCWHIEHKLLGT*GSPGQQSVMWPWAT
Trigger: TGTGGCCCAGGGCCACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR GCA 90 bp GTGCATTGGGTCCGGGCTGGGAGGCAGGAGGCTGTGCTCCAGTCATaGCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAG +
Preference number: 1 (lower is better)
Translates to: VHWVRAGRQEAVLQS*HCPQELRLAFFLLK
Trigger: CTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCCCAGCCCGGACCCAATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGTCCCACCCACCCTCTaGCCATTGCGGGTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVVPPTL*PLRVRP
Trigger: CGGCCTGACCCGCAATGGGCAGAGGGTGGGTGGGAC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCCATGCCGCACAGCTaGTCAGAGGCCCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPMPHS*SEAQSP
Trigger: GGGACTCTGGGCCTCTGACCAGCTGTGCGGCATGGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGACCCGAGTCTGGTTTaGCATCGAAGTCCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGDPSLV*HRSPSA
Trigger: AGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRARASGD*IQEAPW
Trigger: CCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHRASGD*IQEAPW
Trigger: CCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCT...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGGAGGCAGGAGGCTGTaGTCCAGTCATGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVGGRRL*SSHATA
Trigger: GGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTG +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVPQLLW*RCHIGL
Trigger: CAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGGCTCTTGCCTGTCCTaGTGCTGCTACTCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQGSCLS*CCYSCA
Trigger: AGCACAGGAGTAGCAGCAGCAGGACAGGCAAGAGCC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGAGGGGACCCGAGTCTaGTTTGGCATCGAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQEGTRV*FGIEVP
Trigger: AGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAG +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAKLLGT*GSPGQQ
Trigger: CTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAG +
Preference number: 2 (lower is better)
Translates to: GPESGLASKSLCSWFGEAKLLGT*GSPGQQ
Trigger: CTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACCAGAGTCCCACTTGTaGGGCTCTTGCCTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAPESHL*GSCLSC
Trigger: GCAGGACAGGCAAGAGCCTCACAAGTGGGACTCTGG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQLRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCCAGGCGGGGAGGGTaGGGCTTATTAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPRRGG*GLLEET
Trigger: TGTCTCCTCTAATAAGCCCCACCCTCCCCGCCTGGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGCATCGAAGTCCCTCTaGTCATGGTTTGGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQASKSL*SWFGEA
Trigger: TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGTGCCTGTCCTGCTGCTaGTACTCCTGTGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVCLSCC*YSCANG
Trigger: CCCATTAGCACAGGAGTAGCAGCAGCAGGACAGGCA...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGCTCCCCACTGGTGTTaGCACATTGAACATAAGTTA +
Preference number: 2 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGAPHWC*HIEHKL
Trigger: TAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVLRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACACTTGGGGGATAAGTaGGGAAGGGAAGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAHLGDK*GREAGG
Trigger: CCCTCCTGCTTCCCTTCCCCACTTATCCCCCAAGTG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGATGAGGGAAGGCACTTaGGGGATAAGTGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVMREGT*GISGEG
Trigger: CCCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCAT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CAA 90 bp TCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCCAGGTCCAAAGCCTCTCCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: SAHGLGKQRRQRGET*LLGVAPRSKASPRP
Trigger: GGGCCTAGGAGAGGCTTTGGACCTGGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 2 (lower is better)
Translates to: KGSRRGPESGLASKSLCSQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 2 (lower is better)
Translates to: GPESGLASKSLCSWFGEALRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGACCCGAGTCTGGTTTaGCATCGAAGTCCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRADPSLV*HRSPSA
Trigger: AGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAPQLLW*RCHIGL
Trigger: CAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCCAGGGTGAGAAACTaGCTAGGCTGGAACCAATGT +
Preference number: 2 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPRVRN*LGWNQC
Trigger: ACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGATGCTCAGGGGAAAATaGGTAGGTTTCCAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQMLRGK*VGFQSG
Trigger: TCCAGACTGGAAACCTACCCATTTTCCCCTGAGCAT...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCATCTTGCCTGTCCTGCTaGTGCTACTCCTGTGCTAAT +
Preference number: 2 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRASCLSC*CYSCAN
Trigger: ATTAGCACAGGAGTAGCAGCAGCAGGACAGGCAAGA...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCCTCTGCTCATGGTTTaGGGAAGCAACGTAGACAAA +
Preference number: 2 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVPLLMV*GSNVDK
Trigger: TTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGCTCCCCACTGGTGTTaGCACATTGAACATAAGTTA +
Preference number: 2 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGAPHWC*HIEHKL
Trigger: TAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCATGAGGGAAGGCACTTaGGGGATAAGTGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAMREGT*GISGEG
Trigger: CCCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCAT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTCGCCCCTGAGTGACTaGGCCATGGGCCCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SFPICHMRRVDLILCNSFSPLSD*AMGPRG
Trigger: TCCCCTTGGGCCCATGGCCCAGTCACTCAGGGGCGA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGCATCGAAGTCCCTCTaGTCATGGTTTGGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAASKSL*SWFGEA
Trigger: TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPQLLW*RCHIGL
Trigger: CAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 72 bp GGTCCAAAGCCTCTCCTAGGCCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTGCGGGCTCCCCACTGG +
Preference number: 3 (lower is better)
Translates to: GPKPLLGPQLLW*RCHIGLRAPHW
Trigger: CCAGTGGGGAGCCCGCAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGGGCCTAGGAGAGGCTTTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 72 bp GGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTCCTaGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: GSGRPCLLSRHS*EGKKGCRAQGQ
Trigger: CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAGACAAGGTCTGCCCGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 72 bp CTGAATCCAGGAGGCCCCTTGGAGATCCCAGCCAGATaGGGCTCCAGAACTGCAGCAACTCCTTGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: LNPGGPLEIPAR*GSRTAATPWGS
Trigger: GCTGCCCCAAGGAGTTGCTGCAGTTCTGGAGCCTCATCTGGCTGGGATCTCCAAGGGGCCTCCTGGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 72 bp GTAAGAAGGGCTGTCGTGCTCAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGGAGATCCCAGCCAGAT +
Preference number: 3 (lower is better)
Translates to: VRRAVVLRASGD*IQEAPWRSQPD
Trigger: ATCTGGCTGGGATCTCCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCTGAGCACGACAGCCCTTCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR GCA 72 bp AAGTGCATTGGGTCCGGGCTGGGAGGCAGGAGGCTGTaGTCCAGTCATGCCACTGCCCGCAGGAACTTAGAT +
Preference number: 3 (lower is better)
Translates to: KCIGSGLGGRRL*SSHATARRNLD
Trigger: ATCTAAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCCCAGCCCGGACCCAATGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 72 bp GGGGGACCCCAACCCAGGGTGAGAAACTGGCTAGGCTaGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGA +
Preference number: 3 (lower is better)
Translates to: GGPQPRVRNWLG*NQCALSFQRLR
Trigger: TCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGGTTGGGGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 72 bp CTGGATGCTGGGGGACCCCAACCCAGGGTGAGAAACTaGCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: LDAGGPQPRVRN*LGWNQCALSFQ
Trigger: CTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGGTTGGGGTCCCCCAGCATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVQRGET*LLGVAP
Trigger: GGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CAA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAACTGCAGCAACTCCTaGGGGCAGCATCTAGAGGAT +
Preference number: 3 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRANCSNS*GQHLED
Trigger: ATCCTCTAGATGCTGCCCCAAGGAGTTGCTGCAGTT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR TCA 72 bp TGGTGTTGGCACATTGAACATAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAGTCTGTTATGTGGCCC +
Preference number: 3 (lower is better)
Translates to: WCWHIEHKLLGT*GSPGQQSVMWP
Trigger: GGGCCACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAATGTGCCAACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGACTGGTGTTGGCACATaGAACATAAGTTACTCGGGA +
Preference number: 3 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVTGVGT*NISYSG
Trigger: TCCCGAGTAACTTATGTTCAATGTGCCAACACCAGT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 72 bp GTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTaGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGC +
Preference number: 3 (lower is better)
Translates to: VWFGIEVPLLMV*GSNVDKGVRLC
Trigger: GCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR-3UTR CAA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACTGGTGTTGGCACATaGAACATAAGTTACTCGGGA +
Preference number: 3 (lower is better)
Translates to: GPESGLASKSLCSWFGEATGVGT*NISYSG
Trigger: TCCCGAGTAACTTATGTTCAATGTGCCAACACCAGT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CCA 72 bp GAAATAGAAAAGGATGAAGCGGGCCTCATGGCCTCATaGCAAAGAAAGGGCTATGTTAGAAAAGAAACTCGC +
Preference number: 3 (lower is better)
Translates to: EIEKDEAGLMAS*QRKGYVRKETR
Trigger: GCGAGTTTCTTTTCTAACATAGCCCTTTCTTTGCCATGAGGCCATGAGGCCCGCTTCATCCTTTTCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACCCACGCTGACGCTCTaGAGTGCCGGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGPTLTL*SAGRWR
Trigger: CCTCCACCTCCCGGCACTGCAGAGCGTCAGCGTGGG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGCTCACGGAAGCCACTaGGCGCCAGCTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGAHGSH*APAQGA
Trigger: GGCTCCCTGAGCTGGCGCCCAGTGGCTTCCGTGAGC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACGGCACCGCACATCCTaGCCCACGCTGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGRHRTS*PTLTLC
Trigger: GCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGRASGD*IQEAPW
Trigger: CCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCT...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGGGGCCACGGCATGGTaGGGGCTGGAAGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQGATAW*GLEACA
Trigger: GGCGCAGGCTTCCAGCCCCCACCATGCCGTGGCCCC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333090.5
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGGGCCACCTTGGGGCTaGAGCCAGGCCTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQGPPWG*SQASGG
Trigger: ACCCCCGGAGGCCTGGCTCCAGCCCCAAGGTGGCCC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACCCATGCCGCACAGCTaGTCAGAGGCCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGPMPHS*SEAQSP
Trigger: GGGACTCTGGGCCTCTGACCAGCTGTGCGGCATGGG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGCAGGGGCCACGGCATaGTGGGGGCTGGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQAGATA*WGLEAC
Trigger: GCAGGCTTCCAGCCCCCACCATGCCGTGGCCCCTGC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333090.5
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGGGCCACCTTGGGGCTaGAGCCAGGCCTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSGPPWG*SQASGG
Trigger: ACCCCCGGAGGCCTGGCTCCAGCCCCAAGGTGGCCC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATGGATGGGCACCGGCATaGTGTGGGGGCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHGWAPA*CGGPGR
Trigger: GCGGCCTGGGCCCCCACATCATGCCGGTGCCCATCC...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGGATGGGCACCGGCATaGTGTGGGGGCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAGWAPA*CGGPGR
Trigger: GCGGCCTGGGCCCCCACATCATGCCGGTGCCCATCC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGKLLGT*GSPGQQ
Trigger: CTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTT...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGPQLLW*RCHIGL
Trigger: CAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGTGGGGGCTGGAAGCCTaGGCCACAGCCGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVWGLEA*ATAASA
Trigger: TGCCGAGGCGGCTGTGGCGCAGGCTTCCAGCCCCCA...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333090.5
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGCACCCGGGGAAGCATaGCCGGGTTGTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSAPGEA*PGCLGP
Trigger: GGGGCCCAGACAACCCGGCCATGCTTCCCCGGGTGC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTCAGGCTCTGAATGGTaGGCGCAGGCAGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQSGSEW*AQAGRP
Trigger: GGGCCGGCCTGCCTGCGCCCACCATTCAGAGCCTGA...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACCCAGGCGGGGAGGGTaGGGCTTATTAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGPRRGG*GLLEET
Trigger: TGTCTCCTCTAATAAGCCCCACCCTCCCCGCCTGGG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACCCCTGATGCCCATGTaGCCACTGATGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGPLMPM*PLMPSF
Trigger: GAAGCTGGGCATCAGTGGCCACATGGGCATCAGGGG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTCAGGGGTGAGCTGGTaGAGCTCTCGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQSGVSW*SSRLAG
Trigger: CCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGA...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGAGGCCGGCCCAGGCATaGGGGAAGGCACTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVRPAQA*GKALGG
Trigger: TCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGAAGACAGAGCTCACTaGCCTGTGGGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGEDRAH*PVGSLW
Trigger: CCACAGAGACCCCACAGGGCAGTGAGCTCTGTCTTC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCGGCATGGTGGGGGCTaGAAGCCTGCGCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHRHGGG*KPAPQP
Trigger: CGGCTGTGGCGCAGGCTTCCAGCCCCCACCATGCCG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333090.5
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACATGGCCGGGTTGTCTaGGCCCCACTCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSHGRVV*APLTAS
Trigger: GCTGGCCGTGAGTGGGGCCCAGACAACCCGGCCATG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATGCACCCGGGGAAGCATaGCCGGGTTGTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHAPGEA*PGCLGP
Trigger: GGGGCCCAGACAACCCGGCCATGCTTCCCCGGGTGC...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATCAGGCTCTGAATGGTaGGCGCAGGCAGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSSGSEW*AQAGRP
Trigger: GGGCCGGCCTGCCTGCGCCCACCATTCAGAGCCTGA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGACAAGAAAGTGCATTaGGTCCGGGCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGDKKVH*VRAGRQ
Trigger: CTGCCTCCCAGCCCGGACCCAATGCACTTTCTTGTC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACCTGTGGGGTCTCTGTaGGGCCAGCCCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGPVGSL*GQPLMP
Trigger: GGGCATCAGGGGCTGGCCCCACAGAGACCCCACAGG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACACGTCGCTCAGGGGTaGGCTGGTGAAGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGHVAQG*AGEALG
Trigger: GCCGAGAGCTTCACCAGCTCACCCCTGAGCGACGTG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTGGGGCACGAGGCGGTaGATGAGGTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQWGTRR*MRLWER
Trigger: CCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCA...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGCCAGGTTCAGGCTCTaGATGGTGGGCGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSARFRL*MVGAGR
Trigger: CCTGCCTGCGCCCACCATTCAGAGCCTGAACCTGGC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCATCCTGGCCCACGCTaGCGCTCTGCAGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHHPGPR*RSAVPG
Trigger: TCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATAGGCCGGCCCAGGCATaGGGGAAGGCACTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHRPAQA*GKALGG
Trigger: TCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCT...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCCACGCTGACGCTCTaGAGTGCCGGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPTLTL*SAGRWR
Trigger: CCTCCACCTCCCGGCACTGCAGAGCGTCAGCGTGGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACGGGTGTCTACGCAGTaGAGGGCCACCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSRVSTQ*RATLGL
Trigger: CAGCCCCAAGGTGGCCCTGCACTGCGTAGACACCCG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGTCCCACCCACCCTCTaGCCATTGCGGGTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAVPPTL*PLRVRP
Trigger: CGGCCTGACCCGCAATGGGCAGAGGGTGGGTGGGAC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGTTCGGAAGCTGAGATaGTACCCTGGGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGVRKLR*YPGGRA
Trigger: TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAAC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACATGGCCGGGTTGTCTaGGCCCCACTCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAHGRVV*APLTAS
Trigger: GCTGGCCGTGAGTGGGGCCCAGACAACCCGGCCATG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTCAGGCTCTGAATGGTaGGCGCAGGCAGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHSGSEW*AQAGRP
Trigger: GGGCCGGCCTGCCTGCGCCCACCATTCAGAGCCTGA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGGTTGGGCACGGCATaGAGCCGGTTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGRLGTA*SRFQAR
Trigger: CCTGGCCTGGAACCGGCTCCATGCCGTGCCCAACCT...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGCAAGTCTCGGAGGTTaGGCACGGCATGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQASLGG*ARHGAG
Trigger: ACCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGCTCACGGAAGCCACTaGGCGCCAGCTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAAHGSH*APAQGA
Trigger: GGCTCCCTGAGCTGGCGCCCAGTGGCTTCCGTGAGC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAGTGCAGGGCCACCTTaGGGCTGGAGCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRASAGPP*GWSQAS
Trigger: GGAGGCCTGGCTCCAGCCCCAAGGTGGCCCTGCACT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGTCGCCCCTGAGTGACTaGGCCATGGGCCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVSPLSD*AMGPRG
Trigger: TCCCCTTGGGCCCATGGCCCAGTCACTCAGGGGCGA...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGATCGCCCCTGAGTGACTaGGCCATGGGCCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGSPLSD*AMGPRG
Trigger: TCCCCTTGGGCCCATGGCCCAGTCACTCAGGGGCGA...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCTGTGGGGTCTCTGTaGGGCCAGCCCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPVGSL*GQPLMP
Trigger: GGGCATCAGGGGCTGGCCCCACAGAGACCCCACAGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGCAGGGGCCACGGCATaGTGGGGGAATTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGAGATA*WGNSTW
Trigger: CCACGTGGAATTCCCCCACCATGCCGTGGCCCCTGC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR TCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCACCCGAGTCAGGCTaGAGCTGTCGAAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPPESG*SCRKGR
Trigger: TCGGCCTTTTCGACAGCTTCAGCCTGACTCGGGTGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCATCAGGGGTGAGCTGGTaGAGCTCTCGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEASGVSW*SSRLAG
Trigger: CCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGA...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCACGTCGCTCAGGGGTaGGCTGGTGAAGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHHVAQG*AGEALG
Trigger: GCCGAGAGCTTCACCAGCTCACCCCTGAGCGACGTG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCGTGAAGGCAGACACTaGGACCTCCCGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQREGRH*DLPELV
Trigger: AACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEARASGD*IQEAPW
Trigger: CCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCAGGGTTCGGAAGCTaGGATGCTACCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPGFGS*DATLGV
Trigger: TACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGTGCCCATGTGGCCACTaGTGCCCAGCTTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVCPCGH*CPASPN
Trigger: GTTGGGGGAAGCTGGGCATCAGTGGCCACATGGGCA...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGATTCACGGACTGGCGTTaGGTGTCTGCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGFTDWR*VSAAFP
Trigger: TGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAA...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGGGGCACCAGGTTGGTaGCCGAAAGGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGGAPGW*PKGPAP
Trigger: AGGAGCTGGACCTTTCGGGCACCAACCTGGTGCCCC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGGGGCACCAGGTTGGTaGCCGAAAGGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSGAPGW*PKGPAP
Trigger: AGGAGCTGGACCTTTCGGGCACCAACCTGGTGCCCC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGAGTGGACCTGAACTCTaGCCTGCAGCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVSGPEL*PAAGGP
Trigger: GGGACCCCCTGCTGCAGGGCAGAGTTCAGGTCCACT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGTCTCCACCTCGCATTaGCACCCGGGGAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSVSTSH*HPGKHG
Trigger: GCCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGAC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCATCTCCAGCCGGTTaGAGGACAGGTCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPSPAG*RTGPSG
Trigger: CCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGGTTCAGGCTCTGAATaGTGGGCGCAGGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAGSGSE*WAQAGR
Trigger: CCGGCCTGCCTGCGCCCACCATTCAGAGCCTGAACC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAAGGTTGGGCACGGCATaGAGCCGGTTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEARLGTA*SRFQAR
Trigger: CCTGGCCTGGAACCGGCTCCATGCCGTGCCCAACCT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAGGTTGGGCACGGCATaGAGCCGGTTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRARLGTA*SRFQAR
Trigger: CCTGGCCTGGAACCGGCTCCATGCCGTGCCCAACCT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGCAAGTCTCGGAGGTTaGGCACGGCATGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVASLGG*ARHGAG
Trigger: ACCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGGCCACCTTGGGGCTaGAGCCAGGCCTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGPPWG*SQASGG
Trigger: ACCCCCGGAGGCCTGGCTCCAGCCCCAAGGTGGCCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCATCGCCCCTGAGTGACTaGGCCATGGGCCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEASPLSD*AMGPRG
Trigger: TCCCCTTGGGCCCATGGCCCAGTCACTCAGGGGCGA...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGCATTGGGTCCGGGCTaGGAGGCAGGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAALGPG*EAGGCA
Trigger: AGCACAGCCTCCTGCCTCCCAGCCCGGACCCAATGC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACCACCCGAGTCAGGCTaGAGCTGTCGAAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSPPESG*SCRKGR
Trigger: TCGGCCTTTTCGACAGCTTCAGCCTGACTCGGGTGG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCATGTAGTGCCCGGCCCTaGCTGTGCGTCGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEACSARP*LCVVKA
Trigger: TGCCTTCACGACGCACAGTCAGGGCCGGGCACTACA...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGCACGAGGCGGTGAATaGGGTTGTGGGAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGARGGE*GCGRGP
Trigger: TGGACCTCTCCCACAACCTCATTCACCGCCTCGTGC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCATGGGGCACGAGGCGGTaGATGAGGTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAWGTRR*MRLWER
Trigger: CCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCA...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTGGGGCACGAGGCGGTaGATGAGGTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHWGTRR*MRLWER
Trigger: CCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTAGGCCGGCCCAGGCATaGGGGAAGGCACTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVARPAQA*GKALGG
Trigger: TCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACCAGAGTCCCACTTGTaGGGCTCTTGCCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSPESHL*GSCLSC
Trigger: GCAGGACAGGCAAGAGCCTCACAAGTGGGACTCTGG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACCAGGGTTCGGAAGCTaGGATGCTACCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGPGFGS*DATLGV
Trigger: TACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTGCCCATGTGGCCACTaGTGCCCAGCTTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHCPCGH*CPASPN
Trigger: GTTGGGGGAAGCTGGGCATCAGTGGCCACATGGGCA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCCCACGCTGACGCTCTaGAGTGCCGGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAPTLTL*SAGRWR
Trigger: CCTCCACCTCCCGGCACTGCAGAGCGTCAGCGTGGG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGGAGGCAGGAGGCTGTaGTCCAGTCATGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAGGRRL*SSHATA
Trigger: GGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGATCTTGCCTGTCCTGCTaGTGCTACTCCTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGSCLSC*CYSCAN
Trigger: ATTAGCACAGGAGTAGCAGCAGCAGGACAGGCAAGA...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCACCCCCGTGGCTTTaGAGGGTGCAGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPPPWL*RVQPPF
Trigger: GAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGGTGAAGCTCTCGGCTaGCAGGGCTGTCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGGEALG*QGCQAI
Trigger: AATGGCCTGACAGCCCTGCCAGCCGAGAGCTTCACC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTCCCGGAGCTGGTTGTaGCTAAGGTTCACGTCGCTC +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQSRSWL*LRFTSL
Trigger: GAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGA...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCACTTGGGGGATAAGTaGGGAAGGGAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQHLGDK*GREAGG
Trigger: CCCTCCTGCTTCCCTTCCCCACTTATCCCCCAAGTG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACCCAGGCGGGGAGGGTaGGGCTTATTAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGPRRGG*GLLEET
Trigger: TGTCTCCTCTAATAAGCCCCACCCTCCCCGCCTGGG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGCAGGGGCCACGGCATaGTGGGGGCTTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGAGATA*WGLGRG
Trigger: CCCTCTCCCAAGCCCCCACCATGCCGTGGCCCCTGC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCACCCGAGTCAGGCTaGAGCTGTCGAAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPPESG*SCRKGR
Trigger: TCGGCCTTTTCGACAGCTTCAGCCTGACTCGGGTGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACGTGAAGGCAGACACTaGGACCTCCCGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAREGRH*DLPELV
Trigger: AACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGCACGAGGCGGTGAATaGGGTTGTGGGAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAARGGE*GCGRGP
Trigger: TGGACCTCTCCCACAACCTCATTCACCGCCTCGTGC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACAGGGAGCTCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAQGAQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGAGCTCCCTG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCATCCTGGCCCACGCTaGCGCTCTGCAGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAHPGPR*RSAVPG
Trigger: TCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHKLLGT*GSPGQQ
Trigger: CTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTT...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTAGGGCCAGTGGGGACTaGATCCAGGAGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVARASGD*IQEAPW
Trigger: CCAAGGGGCCTCCTGGATTCAGTCCCCACTGGCCCT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGACCGGTTAGATAGATaGTGGGCTAGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVDRLDR*WARQVG
Trigger: CCCCACCTGCCTAGCCCATCATCTATCTAACCGGTC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGACCGGTTAGATAGATaGTGGGCTAGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGDRLDR*WARQVG
Trigger: CCCCACCTGCCTAGCCCATCATCTATCTAACCGGTC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCGGGTGTCTACGCAGTaGAGGGCCACCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVARVSTQ*RATLGL
Trigger: CAGCCCCAAGGTGGCCCTGCACTGCGTAGACACCCG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGTCCCACCCACCCTCTaGCCATTGCGGGTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAVPPTL*PLRVRP
Trigger: CGGCCTGACCCGCAATGGGCAGAGGGTGGGTGGGAC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGCTGTGCTCCAGTCATaGCACTGCCCGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVAVLQS*HCPQEL
Trigger: AAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGGCTCTTGCCTGTCCTaGTGCTGCTACTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVGSCLS*CCYSCA
Trigger: AGCACAGGAGTAGCAGCAGCAGGACAGGCAAGAGCC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGGCTCTTGCCTGTCCTaGTGCTGCTACTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSGSCLS*CCYSCA
Trigger: AGCACAGGAGTAGCAGCAGCAGGACAGGCAAGAGCC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGATGAGGCTCCAGAACTaGAGCAACTCCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQMRLQN*SNSLGQ
Trigger: CTGCCCCAAGGAGTTGCTGCAGTTCTGGAGCCTCAT...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGAGGACAGGTCCAAGTaGGCTGTGTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSEDRSK*AVSRGM
Trigger: CATCCCTCTGGACACAGCCCACTTGGACCTGTCCTC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCATCTCCAGCCGGTTaGAGGACAGGTCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPSPAG*RTGPSG
Trigger: CCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGCTGTCAGGCCATTGTaGCTGAGGTCAAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGAVRPL*LRSSDS
Trigger: GGAGTCGCTTGACCTCAGCCACAATGGCCTGACAGC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGGTGAAGCTCTCGGCTaGCAGGGCTGTCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAGEALG*QGCQAI
Trigger: AATGGCCTGACAGCCCTGCCAGCCGAGAGCTTCACC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATCCCGGAGCTGGTTGTaGCTAAGGTTCACGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSSRSWL*LRFTSL
Trigger: GAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGATCCCGGAGCTGGTTGTaGCTAAGGTTCACGTCGCTC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGSRSWL*LRFTSL
Trigger: GAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGA...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGAGACCTCCCGGAGCTaGTTGTGGCTAAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGETSRS*LWLRFT
Trigger: CGTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGCGGCACCGCACATCCTaGCCCACGCTGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGRHRTS*PTLTLC
Trigger: GCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCG...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAGTGCAGGGCCACCTTaGGGCTGGAGCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKASAGPP*GWSQAS
Trigger: GGAGGCCTGGCTCCAGCCCCAAGGTGGCCCTGCACT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCACCATTTGTCACAAGATaGTGGGGCCCCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSPFVTR*WGPWQQ
Trigger: CTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGG...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGAGGGGACCCGAGTCTaGTTTGGCATCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGEGTRV*FGIEVP
Trigger: AGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCACTTGGGGGATAAGTaGGGAAGGGAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVHLGDK*GREAGG
Trigger: CCCTCCTGCTTCCCTTCCCCACTTATCCCCCAAGTG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGACAAGAAAGTGCATTaGGTCCGGGCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVDKKVH*VRAGRQ
Trigger: CTGCCTCCCAGCCCGGACCCAATGCACTTTCTTGTC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACCCAGGCGGGGAGGGTaGGGCTTATTAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAPRRGG*GLLEET
Trigger: TGTCTCCTCTAATAAGCCCCACCCTCCCCGCCTGGG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCCCATGCCGCACAGCTaGTCAGAGGCCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAPMPHS*SEAQSP
Trigger: GGGACTCTGGGCCTCTGACCAGCTGTGCGGCATGGG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCCCTGATGCCCATGTaGCCACTGATGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPLMPM*PLMPSF
Trigger: GAAGCTGGGCATCAGTGGCCACATGGGCATCAGGGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAGTGCAGCCTCCTTTCTaGCTGCTTTCACGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGVQPPF*LLSRTG
Trigger: GCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCAC...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGCTTCTCCTAGACTTTaGAGGGCCTCGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSASPRL*RASGCR
Trigger: TCTGCACCCCGAGGCCCTCCAAAGTCTAGGAGAAGC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTCAGGCCATTGTGGCTaGGGTCAAGCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHSGHCG*GQATPG
Trigger: ACCTGGAGTCGCTTGACCTCAGCCACAATGGCCTGA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCTGACTGTGCGTCGTaGAGGCAGACACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPDCAS*RQTLRP
Trigger: AGGTCTCAGTGTCTGCCTTCACGACGCACAGTCAGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAGGCACCCGGACCAATaGCAGCTAGAGGGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRARHPDQ*QLEGSH
Trigger: ATGGGAACCCTCTAGCTGTCATTGGTCCGGGTGCCT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCGGGTGTCTACGCAGTaGAGGGCCACCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKARVSTQ*RATLGL
Trigger: CAGCCCCAAGGTGGCCCTGCACTGCGTAGACACCCG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGCCTGTCCTGCTGCTaGTACTCCTGTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSCLSCC*YSCANG
Trigger: CCCATTAGCACAGGAGTAGCAGCAGCAGGACAGGCA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAGGCTCTTGCCTGTCCTaGTGCTGCTACTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAGSCLS*CCYSCA
Trigger: AGCACAGGAGTAGCAGCAGCAGGACAGGCAAGAGCC...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCGGTCTAGAGGATGGTaGCCCTCTTCTCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHRSRGW*PSSHSS
Trigger: GGAGCTGTGAGAAGAGGGGCACCATCCTCTAGACCG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGCACCGGCATGATGTaGGGGCCCAGGCCGCTACAA +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGTGMM*GPRPLQ
Trigger: TTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGCTGTCAGGCCATTGTaGCTGAGGTCAAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAAVRPL*LRSSDS
Trigger: GGAGTCGCTTGACCTCAGCCACAATGGCCTGACAGC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCATTTGTCACAAGATaGTGGGGCCCCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPFVTR*WGPWQQ
Trigger: CTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGCATTGGGTCCGGGCTaGGAGGCAGGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAALGPG*EAGGCA
Trigger: AGCACAGCCTCCTGCCTCCCAGCCCGGACCCAATGC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCCAGGGTGAGAAACTaGCTAGGCTGGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPRVRN*LGWNQC
Trigger: ACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGGGTTCCCACAGTCTTaGGCAGCTCCACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAGFPQS*AAPPPW
Trigger: CCACGGGGGTGGAGCTGCCCAAGACTGTGGGAACCC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR TCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCACGTCGCTCAGGGGTaGGCTGGTGAAGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCHVAQG*AGEALG
Trigger: GCCGAGAGCTTCACCAGCTCACCCCTGAGCGACGTG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGTGTAGTGCCCGGCCCTaGCTGTGCGTCGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGCSARP*LCVVKA
Trigger: TGCCTTCACGACGCACAGTCAGGGCCGGGCACTACA...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGCCAGGTTCAGGCTCTaGATGGTGGGCGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCARFRL*MVGAGR
Trigger: CCTGCCTGCGCCCACCATTCAGAGCCTGAACCTGGC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCAGGGAGCTCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAQGAQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGAGCTCCCTG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCCACAACTCCTGTGGTaGCGCTGCCACATAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAPQLLW*RCHIGL
Trigger: CAGGCCTATGTGGCAGCGTCACCACAGGAGTTGTGG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAGCAGAGGTTCTCCATaGGGGTCCCACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKASRGSP*GSHPCS
Trigger: GCTGCAGGGGTGGGACCCTCATGGAGAACCTCTGCT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAGTGGACCTGAACTCTaGCCTGCAGCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKASGPEL*PAAGGP
Trigger: GGGACCCCCTGCTGCAGGGCAGAGTTCAGGTCCACT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGGAGGCAGGAGGCTGTaGTCCAGTCATGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAGGRRL*SSHATA
Trigger: GGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTGCCTGTCCTGCTGCTaGTACTCCTGTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHCLSCC*YSCANG
Trigger: CCCATTAGCACAGGAGTAGCAGCAGCAGGACAGGCA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGAGGCTGGAACCAATGTaGCCTAAGCTTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVRLEPM*PKLPEA
Trigger: AGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAATGAGGCTCCAGAACTaGAGCAACTCCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAMRLQN*SNSLGQ
Trigger: CTGCCCCAAGGAGTTGCTGCAGTTCTGGAGCCTCAT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCCACATTTCCTTTCTaGACTGCCCTAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPTFPF*TALAEV
Trigger: AACCTCTGCTAGGGCAGTGCAGAAAGGAAATGTGGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGGCACCGGCATGATGTaGGGGCCCAGGCCGCTACAA +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCGTGMM*GPRPLQ
Trigger: TTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGGTTCAGGCTCTGAATaGTGGGCGCAGGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCGSGSE*WAQAGR
Trigger: CCGGCCTGCCTGCGCCCACCATTCAGAGCCTGAACC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATTTGTCACAAGATGGTaGGGCCCCTGGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSFVTRW*GPWQQN
Trigger: ATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHLRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRALRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGACCCGAGTCTGGTTTaGCATCGAAGTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEADPSLV*HRSPSA
Trigger: AGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCCCATGCCGCACAGCTaGTCAGAGGCCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCPMPHS*SEAQSP
Trigger: GGGACTCTGGGCCTCTGACCAGCTGTGCGGCATGGG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGCATGGTGGGGGCTTaGGAGAGGGGCAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGMVGA*ERGSSQ
Trigger: CTGTGAACTGCCCCTCTCCCAAGCCCCCACCATGCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCCTGACTGTGCGTCGTaGAGGCAGACACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAPDCAS*RQTLRP
Trigger: AGGTCTCAGTGTCTGCCTTCACGACGCACAGTCAGG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTAGGCACCCGGACCAATaGCAGCTAGAGGGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVARHPDQ*QLEGSH
Trigger: ATGGGAACCCTCTAGCTGTCATTGGTCCGGGTGCCT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGAAGTTACTCGGGACCTaGGGCAGCCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGKLLGT*GSPGQQ
Trigger: CTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTT...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATGCATCGAAGTCCCTCTaGTCATGGTTTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHASKSL*SWFGEA
Trigger: TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGC...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAAGGCTGGAACCAATGTaGCCTAAGCTTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEARLEPM*PKLPEA
Trigger: AGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCT...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGCCTGCAGCAAACTTTTaGCTGGGCATCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVPAANF*LGIQVF
Trigger: AAACACCTGGATGCCCAGGCAAAAGTTTGCTGCAGG...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGATTTCCTTTCTGCACTaGCCTAGCAGAGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQISFLH*PSRGSP
Trigger: TGGAGAACCTCTGCTAGGGCAGTGCAGAAAGGAAAT...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGTTTCCAGGTGCACAGTaGAAGCTGTTAGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQFPGAQ*KLLVDL
Trigger: CAGATCCACTAACAGCTTGCACTGTGCACCTGGAAA...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGTCTCCACCTCGCATTaGCACCCGGGGAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCVSTSH*HPGKHG
Trigger: GCCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGAC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGCCATCTCCAGCCGGTTaGAGGACAGGTCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGPSPAG*RTGPSG
Trigger: CCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGG...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGCTGTCAGGCCATTGTaGCTGAGGTCAAGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAAVRPL*LRSSDS
Trigger: GGAGTCGCTTGACCTCAGCCACAATGGCCTGACAGC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGCAAGTCTCGGAGGTTaGGCACGGCATGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCASLGG*ARHGAG
Trigger: ACCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGAGGGGACCCGAGTCTaGTTTGGCATCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAEGTRV*FGIEVP
Trigger: AGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCCAGGGTGAGAAACTaGCTAGGCTGGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPRVRN*LGWNQC
Trigger: ACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCTTTCACGGCATTCCTaGGAGGGTAAGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHLSRHS*EGKKGC
Trigger: ACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACTTTCACGGCATTCCTaGGAGGGTAAGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRALSRHS*EGKKGC
Trigger: ACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGCCCCTGATGCCCATGTaGCCACTGATGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGPLMPM*PLMPSF
Trigger: GAAGCTGGGCATCAGTGGCCACATGGGCATCAGGGG...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATCAATTACCTCCCACTaGGTCCCTCCCACAACACAT +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSSITSH*VPPTTH
Trigger: ATGTGTTGTGGGAGGGACCCAGTGGGAGGTAATTGA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
3UTR CAA 72 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCCAGGTCCAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGET*LLGVAPRSKAS
Trigger: AGAGGCTTTGGACCTGGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCTCAGGCCATTGTGGCTaGGGTCAAGCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKASGHCG*GQATPG
Trigger: ACCTGGAGTCGCTTGACCTCAGCCACAATGGCCTGA...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGTCAGGCCATTGTGGCTaGGGTCAAGCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGSGHCG*GQATPG
Trigger: ACCTGGAGTCGCTTGACCTCAGCCACAATGGCCTGA...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAGGCACCCGGACCAATaGCAGCTAGAGGGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKARHPDQ*QLEGSH
Trigger: ATGGGAACCCTCTAGCTGTCATTGGTCCGGGTGCCT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCATCCTGGCCCACGCTaGCGCTCTGCAGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFHPGPR*RSAVPG
Trigger: TCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACATGTCCCGCATATCTaGGTCATGCTGATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAHVPHI*VMLMQE
Trigger: CTCTTGCATCAGCATGACTCAGATATGCGGGACATG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGCTGTGCTCCAGTCATaGCACTGCCCGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGAVLQS*HCPQEL
Trigger: AAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGAAGACAGAGCTCACTaGCCTGTGGGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGEDRAH*PVGSLW
Trigger: CCACAGAGACCCCACAGGGCAGTGAGCTCTGTCTTC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGAGACCTCCCGGAGCTaGTTGTGGCTAAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGETSRS*LWLRFT
Trigger: CGTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGCTCACGGAAGCCACTaGGCGCCAGCTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFAHGSH*APAQGA
Trigger: GGCTCCCTGAGCTGGCGCCCAGTGGCTTCCGTGAGC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCAGTGCAGGGCCACCTTaGGGCTGGAGCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFSAGPP*GWSQAS
Trigger: GGAGGCCTGGCTCCAGCCCCAAGGTGGCCCTGCACT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTATGAGGGAAGGCACTTaGGGGATAAGTGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAMREGT*GISGEG
Trigger: CCCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCAT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGATGCTCAGGGGAAAATaGGTAGGTTTCCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVMLRGK*VGFQSG
Trigger: TCCAGACTGGAAACCTACCCATTTTCCCCTGAGCAT...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCTGTGGGGTCTCTGTaGGGCCAGCCCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPVGSL*GQPLMP
Trigger: GGGCATCAGGGGCTGGCCCCACAGAGACCCCACAGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTCAGGGGTGAGCTGGTaGAGCTCTCGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFSGVSW*SSRLAG
Trigger: CCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGCCAGGTTCAGGCTCTaGATGGTGGGCGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFARFRL*MVGAGR
Trigger: CCTGCCTGCGCCCACCATTCAGAGCCTGAACCTGGC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATTTCTGCTTTTACAAATaGCATGTCTCCATCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHFCFYK*HVSIPG
Trigger: GCCGGGGATGGAGACATGTCATTTGTAAAAGCAGAA...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGACCGGTTAGATAGATaGTGGGCTAGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCDRLDR*WARQVG
Trigger: CCCCACCTGCCTAGCCCATCATCTATCTAACCGGTC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAAGATACAATTCAAGTTaGGATTTGGGTGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: KGSRRGPESGLASKSLCSRYNSS*DLGAGT
Trigger: TGTGCCCGCACCCAAATCTCAACTTGAATTGTATCT...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGCTGTGCTCCAGTCATaGCACTGCCCGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCAVLQS*HCPQEL
Trigger: AAGTTCCTGCGGGCAGTGGCATGACTGGAGCACAGC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGTGCCTGTCCTGCTGCTaGTACTCCTGTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGCLSCC*YSCANG
Trigger: CCCATTAGCACAGGAGTAGCAGCAGCAGGACAGGCA...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGTTCGGAAGCTGAGATaGTACCCTGGGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGVRKLR*YPGGRA
Trigger: TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAAC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGTTCGGAAGCTGAGATaGTACCCTGGGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAVRKLR*YPGGRA
Trigger: TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAAC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGGCACCGGCATGATGTaGGGGCCCAGGCCGCTACAA +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFGTGMM*GPRPLQ
Trigger: TTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGAGGACAGGTCCAAGTaGGCTGTGTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCEDRSK*AVSRGM
Trigger: CATCCCTCTGGACACAGCCCACTTGGACCTGTCCTC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTGAGACCTCCCGGAGCTaGTTGTGGCTAAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCETSRS*LWLRFT
Trigger: CGTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTC...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTTTTGTCACAAGATGGTaGGGCCCCTGGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAFVTRW*GPWQQN
Trigger: ATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAA...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGCATTGGGTCCGGGCTaGGAGGCAGGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFALGPG*EAGGCA
Trigger: AGCACAGCCTCCTGCCTCCCAGCCCGGACCCAATGC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTGTAGTGCCCGGCCCTaGCTGTGCGTCGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFCSARP*LCVVKA
Trigger: TGCCTTCACGACGCACAGTCAGGGCCGGGCACTACA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTGCCCATGTGGCCACTaGTGCCCAGCTTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFCPCGH*CPASPN
Trigger: GTTGGGGGAAGCTGGGCATCAGTGGCCACATGGGCA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGATTTCCATACATCTTCTaGAATCTAGGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGFPYIF*NLGRGS
Trigger: GGAACCTCTGCCTAGATTTCAGAAGATGTATGGAAA...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR TCA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCACAAAATGATCTCCTTTaGCTCCATGTCCCGCATATC +
Preference number: 4 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAQNDLL*LHVPHI
Trigger: GATATGCGGGACATGGAGTCAAAGGAGATCATTTTG...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGTCCAATGTCTCATCTaGGACAAGTCCCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAVQCLI*DKSLPP
Trigger: AGGTGGAAGGGACTTGTCTCAGATGAGACATTGGAC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCAGTGGACCTGAACTCTaGCCTGCAGCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFSGPEL*PAAGGP
Trigger: GGGACCCCCTGCTGCAGGGCAGAGTTCAGGTCCACT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGGAGGCAGGAGGCTGTaGTCCAGTCATGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFGGRRL*SSHATA
Trigger: GGCAGTGGCATGACTGGAGCACAGCCTCCTGCCTCC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAGGCTGGAACCAATGTaGCCTAAGCTTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKARLEPM*PKLPEA
Trigger: AGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCTTTGTCACAAGATGGTaGGGCCCCTGGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAFVTRW*GPWQQN
Trigger: ATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAA...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCAGCAGTCTGTTATGTaGCCCTGGGCCACACCATTT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAQQSVM*PWATPF
Trigger: AAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGCTCCCCACTGGTGTTaGCACATTGAACATAAGTTA +
Preference number: 4 (lower is better)
Translates to: GPESGLASKSLCSWFGEAAPHWC*HIEHKL
Trigger: TAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCTGCGGGCTCCCCACTaGTGTTGGCACATTGAACAT +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCLRAPH*CWHIEH
Trigger: ATGTTCAATGTGCCAACACCAGTGGGGAGCCCGCAG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGATGAAGCGGGCCTCATaGCCTCATGGCAAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGMKRAS*PHGKER
Trigger: CCTTTCTTTGCCATGAGGCCATGAGGCCCGCTTCAT...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGCCCAGGGTGAGAAACTaGCTAGGCTGGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGPRVRN*LGWNQC
Trigger: ACATTGGTTCCAGCCTAGCCAGTTTCTCACCCTGGG...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCGTGAAGGCAGACACTaGGACCTCCCGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFREGRH*DLPELV
Trigger: AACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCAGAGTCCCACTTGTaGGGCTCTTGCCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPESHL*GSCLSC
Trigger: GCAGGACAGGCAAGAGCCTCACAAGTGGGACTCTGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCAGGGTTCGGAAGCTaGGATGCTACCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPGFGS*DATLGV
Trigger: TACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTTTCTGCTTTTACAAATaGCATGTCTCCATCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAFCFYK*HVSIPG
Trigger: GCCGGGGATGGAGACATGTCATTTGTAAAAGCAGAA...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCAAACACCTCAGCTCCTaGCCAGTTAAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAKHLSS*PVKLGV
Trigger: AACCCCAAGCTTAACTGGGCAGGAGCTGAGGTGTTT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGTCTTGCCTGTCCTGCTaGTGCTACTCCTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGSCLSC*CYSCAN
Trigger: ATTAGCACAGGAGTAGCAGCAGCAGGACAGGCAAGA...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGGTGAAGCTCTCGGCTaGCAGGGCTGTCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFGEALG*QGCQAI
Trigger: AATGGCCTGACAGCCCTGCCAGCCGAGAGCTTCACC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTATGAAGCGGGCCTCATaGCCTCATGGCAAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCMKRAS*PHGKER
Trigger: CCTTTCTTTGCCATGAGGCCATGAGGCCCGCTTCAT...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTATGCTCAGGGGAAAATaGGTAGGTTTCCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAMLRGK*VGFQSG
Trigger: TCCAGACTGGAAACCTACCCATTTTCCCCTGAGCAT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
3UTR CAA 72 bp AGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTaGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: SLVWHRSPSAHG*GKQRRQRGETL
Trigger: CAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCTGACTGTGCGTCGTaGAGGCAGACACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPDCAS*RQTLRP
Trigger: AGGTCTCAGTGTCTGCCTTCACGACGCACAGTCAGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTAAACACCTCAGCTCCTaGCCAGTTAAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCKHLSS*PVKLGV
Trigger: AACCCCAAGCTTAACTGGGCAGGAGCTGAGGTGTTT...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTTCTTGCCTGTCCTGCTaGTGCTACTCCTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCSCLSC*CYSCAN
Trigger: ATTAGCACAGGAGTAGCAGCAGCAGGACAGGCAAGA...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGAAGACAGAGCTCACTaGCCTGTGGGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFEDRAH*PVGSLW
Trigger: CCACAGAGACCCCACAGGGCAGTGAGCTCTGTCTTC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCCATTTGTCACAAGATaGTGGGGCCCCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFPFVTR*WGPWQQ
Trigger: CTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGCTCCCCACTGGTGTTaGCACATTGAACATAAGTTA +
Preference number: 4 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAAPHWC*HIEHKL
Trigger: TAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCCTCTGCTCATGGTTTaGGGAAGCAACGTAGACAAA +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAPLLMV*GSNVDK
Trigger: TTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCGAGGGGACCCGAGTCTaGTTTGGCATCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFEGTRV*FGIEVP
Trigger: AGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCCACTTGGGGGATAAGTaGGGAAGGGAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFHLGDK*GREAGG
Trigger: CCCTCCTGCTTCCCTTCCCCACTTATCCCCCAAGTG...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCATGCTCAGGGGAAAATaGGTAGGTTTCCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAMLRGK*VGFQSG
Trigger: TCCAGACTGGAAACCTACCCATTTTCCCCTGAGCAT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGATACAGCTGTTCCACATaGAAGAAATTAGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGYSCST*KKLAKT
Trigger: TGTTTTGGCTAATTTCTTCCATGTGGAACAGCTGTA...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR GCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCATGAGGCTCCAGAACTaGAGCAACTCCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFMRLQN*SNSLGQ
Trigger: CTGCCCCAAGGAGTTGCTGCAGTTCTGGAGCCTCAT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR GCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGTTTCAAAACCAATCATaGCTTCCCAACAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGFQNQS*LPNSPP
Trigger: TGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAA...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CCA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGCTCCCCACTGGTGTTaGCACATTGAACATAAGTTA +
Preference number: 4 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGAPHWC*HIEHKL
Trigger: TAACTTATGTTCAATGTGCCAACACCAGTGGGGAGC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCCTCTGCTCATGGTTTaGGGAAGCAACGTAGACAAA +
Preference number: 4 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCPLLMV*GSNVDK
Trigger: TTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCATGAGGGAAGGCACTTaGGGGATAAGTGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFMREGT*GISGEG
Trigger: CCCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCAT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCATGAAGCGGGCCTCATaGCCTCATGGCAAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFMKRAS*PHGKER
Trigger: CCTTTCTTTGCCATGAGGCCATGAGGCCCGCTTCAT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR TCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTTCTGCTTTTACAAATaGCATGTCTCCATCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFFCFYK*HVSIPG
Trigger: GCCGGGGATGGAGACATGTCATTTGTAAAAGCAGAA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CCA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCAACACATGGGAATACTaGGAGATACAATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFPICHMRRVDLILCNSFNTWEY*EIQFKL
Trigger: CAACTTGAATTGTATCTCCCAGTATTCCCATGTGTT...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS TCA 90 bp TGCCCTCCCGCACCAGGCGCCGGCACCGCACATCCTGGCCCACGCTaGCGCTCTGCAGTGCCGGGAGGTGGAGGAGCAGCGCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: CPPAPGAGTAHPGPR*RSAVPGGGGAAPQA
Trigger: TGCCTGAGGCGCTGCTCCTCCACCTCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCGGCGCCTGGTGCGGGAGGGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CCCTGGCAGCAGAATCCCGGGTGTCTACGCAGTGCAGGGCCACCTTaGGGCTGGAGCCAGGCCTCCGGGGGTAGGTGCCCTCCCGCACCA +
Preference number: 5 (lower is better)
Translates to: PWQQNPGCLRSAGPP*GWSQASGGRCPPAP
Trigger: TGGTGCGGGAGGGCACCTACCCCCGGAGGCCTGGCTCCAGCCCCAAGGTGGCCCTGCACTGCGTAGACACCCGGGATTCTGCTGCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 90 bp GCGCAGGCAGGCCGGCCCTCGTGGGGTGGGGCACGAGGCGGTGAATaGGGTTGTGGGAGAGGTCCACGTGTAGTGCCCGGCCCTGACTGT +
Preference number: 5 (lower is better)
Translates to: AQAGRPSWGGARGGE*GCGRGPRVVPGPDC
Trigger: ACAGTCAGGGCCGGGCACTACACGTGGACCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCACCCCACGAGGGCCGGCCTGCCTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS GCA 90 bp CCCGGTAGCTCACGGAAGCCACTGGGCGCCAGCTCAGGGAGCCTCTaGAGGCTGGCCAGAGACAGGTGTGTAAGGCCTCCCAGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: PGSSRKPLGASSGSL*RLARDRCVRPPSPA
Trigger: CGCGGGGCTGGGAGGCCTTACACACCTGTCTCTGGCCAGCCTGCAGAGGCTCCCTGAGCTGGCGCCCAGTGGCTTCCGTGAGCTACCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp AGCCCGGCCCCGCCAACACCGACTCATTCACCATCTCCAGCCGGTTaGAGGACAGGTCCAAGTGGGCTGTGTCCAGAGGGATGGGCACCG +
Preference number: 5 (lower is better)
Translates to: SPAPPTPTHSPSPAG*RTGPSGLCPEGWAP
Trigger: CGGTGCCCATCCCTCTGGACACAGCCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGGTGAATGAGTCGGTGTTGGCGGGGCCGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 90 bp AGGTCCAAGTGGGCTGTGTCCAGAGGGATGGGCACCGGCATGATGTaGGGGCCCAGGCCGCTACAATCCACCCGAGTCAGGCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RSKWAVSRGMGTGMM*GPRPLQSTRVRLKL
Trigger: CAGCTTCAGCCTGACTCGGGTGGATTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCCCATCCCTCTGGACACAGCCCACTTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 90 bp GGTTCCCATCCAGGCTCAGGTAGCGCAGGGGCAAGTCTCGGAGGTTaGGCACGGCATGGAGCCGGTTCCAGGCCAGGTTCAGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GSHPGSGSAGASLGG*ARHGAGSRPGSGSE
Trigger: TTCAGAGCCTGAACCTGGCCTGGAACCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGCCCCTGCGCTACCTGAGCCTGGATGGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGGCAGGGGCACCAGGTaGGTGCCCGAAAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQGRGTR*VPERSS
Trigger: GCTGGACCTTTCGGGCACCAACCTGGTGCCCCTGCC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAATAGAGGCTTTGGTCTaGGGCCCTGGACCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGIEALV*GPGPPR
Trigger: CCTGGGAGGTCCAGGGCCCAAGACCAAAGCCTCTAT...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS TCA 90 bp GACCTCCCGGAGCTGGTTGTGGCTAAGGTTCACGTCGCTCAGGGGTaGGCTGGTGAAGCTCTCGGCTGGCAGGGCTGTCAGGCCATTGTG +
Preference number: 5 (lower is better)
Translates to: DLPELVVAKVHVAQG*AGEALGWQGCQAIV
Trigger: CACAATGGCCTGACAGCCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS GCA 90 bp GCCTCAGGCAGGGGCACCAGGTTGGTGCCCGAAAGGTCCAGCTCCTaGAGGGAGCTCAGGCCTGAAAACACCTCAGCTCCTGCCCAGTTA +
Preference number: 5 (lower is better)
Translates to: ASGRGTRLVPERSSS*RELRPENTSAPAQL
Trigger: TAACTGGGCAGGAGCTGAGGTGTTTTCAGGCCTGAGCTCCCTGCAGGAGCTGGACCTTTCGGGCACCAACCTGGTGCCCCTGCCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp ATGTGGCCCTGGGCCACACCATTTGTCACAAGATGGTGGGGCCCCTaGCAGCAGAATCCCGGGTGTCTACGCAGTGCAGGGCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: MWPWATPFVTRWWGP*QQNPGCLRSAGPPW
Trigger: CCAAGGTGGCCCTGCACTGCGTAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGGAAGCATGGCCGGGTaGTCTGGGCCCCACTCACGG +
Preference number: 5 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVGSMAG*SGPHSR
Trigger: CCGTGAGTGGGGCCCAGACAACCCGGCCATGCTTCC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGGCAAGTCTCGGAGGTaGGGCACGGCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVGKSRR*GTAWSR
Trigger: CCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGCC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGACATGAGGGAAGGCACTaGGGGGATAAGTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGHEGRH*GDKWGR
Trigger: CCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCATG...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS GCA 90 bp GGTTCCCACAGTCTTGGGCAGCTCCACCCCCGTGGCTTTGCAGGGTaGAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCGTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GSHSLGQLHPRGFAG*SLLSGCFHGLALSV
Trigger: GACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGAGCTGCCCAAGACTGTGGGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAGGTCTCCACCTCGCATaGGCACCCGGGGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: KGSRRGPESGLASKSLCSGLHLA*APGEAW
Trigger: CCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGACC...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGGTCTCCACCTCGCATaGGCACCCGGGGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVGLHLA*APGEAW
Trigger: CCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGACC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATGGCAAGTCTCGGAGGTaGGGCACGGCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHGKSRR*GTAWSR
Trigger: CCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGCC...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATGGCAGGGGCACCAGGTaGGTGCCCGAAAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHGRGTR*VPERSS
Trigger: GCTGGACCTTTCGGGCACCAACCTGGTGCCCCTGCC...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CTGTGCGTCGTGAAGGCAGACACTGAGACCTCCCGGAGCTGGTTGTaGCTAAGGTTCACGTCGCTCAGGGGTGAGCTGGTGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LCVVKADTETSRSWL*LRFTSLRGELVKLS
Trigger: CGAGAGCTTCACCAGCTCACCCCTGAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACGACGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CAGTCTGTTATGTGGCCCTGGGCCACACCATTTGTCACAAGATGGTaGGGCCCCTGGCAGCAGAATCCCGGGTGTCTACGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QSVMWPWATPFVTRW*GPWQQNPGCLRSAG
Trigger: CCCTGCACTGCGTAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACATAACAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp GATGCAAGAGGTGGGTTCCCACAGTCTTGGGCAGCTCCACCCCCGTaGCTTTGCAGGGTGCAGCCTCCTTTCTGGCTGCTTTCACGGACT +
Preference number: 5 (lower is better)
Translates to: DARGGFPQSWAAPPP*LCRVQPPFWLLSRT
Trigger: AGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGAGCTGCCCAAGACTGTGGGAACCCACCTCTTGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACCTGCCCAGTTAAGCTaGGGGTTGCCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGPAQLS*GLPDRS
Trigger: GGACCTGTCGGGCAACCCCAAGCTTAACTGGGCAGG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CAGCAGTCTGTTATGTGGCCCTGGGCCACACCATTTGTCACAAGATaGTGGGGCCCCTGGCAGCAGAATCCCGGGTGTCTACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: QQSVMWPWATPFVTR*WGPWQQNPGCLRSA
Trigger: TGCACTGCGTAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACATAACAGACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp GGGTCTCAAAGCGGAGCCTGTCTCCCTACCAAACAGACGCAACTCTaGATCACACTCTTTCCAAGAAGCGCGGGGAGGGCAACGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSQSGACLPTKQTQL*ITLFPRSAGRATPA
Trigger: GGCTGGCGTTGCCCTCCCCGCGCTTCTTGGAAAGAGTGTGATCCAGAGTTGCGTCTGTTTGGTAGGGAGACAGGCTCCGCTTTGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525167.1
CDS-3UTR CAA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAACCATCTCCAGCCGGTaGGAGGACAGGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGTISSR*EDRSKW
Trigger: CCACTTGGACCTGTCCTCCAACCGGCTGGAGATGGT...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGATGCTGGTGAGCAGGTaGTGGCTGAGATCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQMLVSR*WLRSRP
Trigger: TGGCCTGGATCTCAGCCACAACCTGCTCACCAGCAT...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCTGCCCAGTTAAGCTaGGGGTTGCCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPAQLS*GLPDRS
Trigger: GGACCTGTCGGGCAACCCCAAGCTTAACTGGGCAGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGACCTGGGCCACACCATTaGTCACAAGATGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: EGTRVWFGIEVPLLMVWGPGPHH*SQDGGA
Trigger: GGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGG...TCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQQRGET*LLGVAP
Trigger: GGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCATGAGGGAAGGCACTaGGGGGATAAGTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQHEGRH*GDKWGR
Trigger: CCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCATG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CTTTGGTCTTGGGCCCTGGACCTCCCAGGAGCTTCTCCTAGACTTTaGAGGGCCTCGGGGTGCAGAAATTGGGCAATGTACCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LWSWALDLPGASPRL*RASGCRNWAMYLLQ
Trigger: CTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCCTCCAAAGTCTAGGAGAAGCTCCTGGGAGGTCCAGGGCCCAAGACCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS CCA 90 bp CAGTTCACAGGTGGGAGAGTTGATAGAGGCTTTGGTCTTGGGCCCTaGACCTCCCAGGAGCTTCTCCTAGACTTTGGAGGGCCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: QFTGGRVDRGFGLGP*TSQELLLDFGGPRG
Trigger: ACCCCGAGGCCCTCCAAAGTCTAGGAGAAGCTCCTGGGAGGTCCAGGGCCCAAGACCAAAGCCTCTATCAACTCTCCCACCTGTGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533752.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGAAGCATGGCCGGGTaGTCTGGGCCCCACTCACGG +
Preference number: 5 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGSMAG*SGPHSR
Trigger: CCGTGAGTGGGGCCCAGACAACCCGGCCATGCTTCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATAGGGCTGTCAGGCCATaGTGGCTGAGGTCAAGCGAC +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHRAVRP*WLRSSD
Trigger: GTCGCTTGACCTCAGCCACAATGGCCTGACAGCCCT...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAAGGGCTGTCAGGCCATaGTGGCTGAGGTCAAGCGAC +
Preference number: 5 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRARAVRP*WLRSSD
Trigger: GTCGCTTGACCTCAGCCACAATGGCCTGACAGCCCT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGCAAGTCTCGGAGGTaGGGCACGGCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGKSRR*GTAWSR
Trigger: CCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCGGCAGGGGCACCAGGTaGGTGCCCGAAAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAGRGTR*VPERSS
Trigger: GCTGGACCTTTCGGGCACCAACCTGGTGCCCCTGCC...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCTGGGCCACACCATTaGTCACAAGATGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPGPHH*SQDGGA
Trigger: GGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCACCTGGGCCACACCATTaGTCACAAGATGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPESGLASKSLCSWFGEAPGPHH*SQDGGA
Trigger: GGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGG...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGGACCCGAGTCTGGTTaGGCATCGAAGTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GPESGLASKSLCSWFGEAGPESG*ASKSLC
Trigger: GCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGGTCGGGCAGACCTaGTCTCCTTTCACGGCATTC +
Preference number: 5 (lower is better)
Translates to: KGSRRGPESGLASKSLCSWVGQT*SPFTAF
Trigger: GAATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCA...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGAGTTGATAGAGGCTTaGGTCTTGGGCCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQELIEA*VLGPGP
Trigger: AGGTCCAGGGCCCAAGACCAAAGCCTCTATCAACTC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS GCA 90 bp CTGGACCTCCCAGGAGCTTCTCCTAGACTTTGGAGGGCCTCGGGGTaGAGAAATTGGGCAATGTACCTCCTGCAGTGGCCCAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: LDLPGASPRLWRASG*RNWAMYLLQWPRLV
Trigger: AACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCCTCCAAAGTCTAGGAGAAGCTCCTGGGAGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS-3UTR CAA 90 bp CTAAGGAAACAGCCCAGGGTTCGGAAGCTGAGATGCTACCCTGGGGGTAGAGCAATGCTGGTGAGCAGGTaGTGGCTGAGATCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LRKQPRVRKLRCYPGGRAMLVSR*WLRSRP
Trigger: TGGCCTGGATCTCAGCCACAACCTGCTCACCAGCAT...TGCTCTACCCCCAGGGTAGCATCTCAGCTTCCGAACCCTGGGCTGTTTCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHQRGET*LLGVAP
Trigger: GGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGCCCTCTGCTCATGGTTaGGGGAAGCAACGTAGACAA +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQPSAHG*GKQRRQ
Trigger: TTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGG...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGAACTGCAGCAACTCCTaGGGGCAGCATCTAGAGGAT +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQNCSNS*GQHLED
Trigger: ATCCTCTAGATGCTGCCCCAAGGAGTTGCTGCAGTT...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 90 bp CCAGGAGCTTCTCCTAGACTTTGGAGGGCCTCGGGGTGCAGAAATTaGGCAATGTACCTCCTGCAGTGGCCCAGACTTGTTAACACACCC +
Preference number: 5 (lower is better)
Translates to: PGASPRLWRASGCRN*AMYLLQWPRLVNTP
Trigger: GGGTGTGTTAACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCCTCCAAAGTCTAGGAGAAGCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTACCTCCCGGAGCTGGTaGTGGCTAAGGTTCACGTCG +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVATSRSW*WLRFTS
Trigger: CGACGTGAACCTTAGCCACAACCAGCTCCGGGAGGT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCCCTGCCCAGTTAAGCTaGGGGTTGCCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAPAQLS*GLPDRS
Trigger: GGACCTGTCGGGCAACCCCAAGCTTAACTGGGCAGG...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGGACCCGAGTCTGGTTaGGCATCGAAGTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAGPESG*ASKSLC
Trigger: GCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAAACTGCAGCAACTCCTaGGGGCAGCATCTAGAGGAT +
Preference number: 5 (lower is better)
Translates to: KGSRRGPESGLASKSLCSNCSNS*GQHLED
Trigger: ATCCTCTAGATGCTGCCCCAAGGAGTTGCTGCAGTT...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGGTGGGGGTACAGGCATaGGGTAAATACAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVVGVQA*GKYSCS
Trigger: GGAACAGCTGTATTTACCCAATGCCTGTACCCCCAC...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCGGCATGGTGGGGGCTaGGGAGAGGGGCAGTTCACA +
Preference number: 5 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCRHGGG*GEGQFT
Trigger: TGTGAACTGCCCCTCTCCCAAGCCCCCACCATGCCG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS TCA 90 bp TTGCAGGGTGCAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCGTTaGGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: LQGAASFLAAFTDWR*VSAAFPGAQCKLLV
Trigger: CACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS GCA 90 bp TGCAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCGTTGAGTGTCTaGAGCTTTTCCAGGTGCACAGTGCAAGCTGTTAGTGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: CSLLSGCFHGLALSV*SFSRCTVQAVSGSA
Trigger: GGCAGATCCACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS GCA 90 bp GACTTTGGAGGGCCTCGGGGTGCAGAAATTGGGCAATGTACCTCCTaGAGTGGCCCAGACTTGTTAACACACCCAGTCTGCTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: DFGGPRGAEIGQCTS*SGPDLLTHPVCLLL
Trigger: AAGCAGCAAGCAGACTGGGTGTGTTAACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCCTCCAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS CCA 90 bp TGGAGGGCCTCGGGGTGCAGAAATTGGGCAATGTACCTCCTGCAGTaGCCCAGACTTGTTAACACACCCAGTCTGCTTGCTGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: WRASGCRNWAMYLLQ*PRLVNTPSLLAASF
Trigger: GAAAGAAGCAGCAAGCAGACTGGGTGTGTTAACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS-3UTR CAA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCACCTCCCGGAGCTGGTaGTGGCTAAGGTTCACGTCG +
Preference number: 5 (lower is better)
Translates to: QSCHCPQELRLAFFLLKATSRSW*WLRFTS
Trigger: CGACGTGAACCTTAGCCACAACCAGCTCCGGGAGGT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCAAAGGGGTGAGACTTaGCTCCTAGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAQRGET*LLGVAP
Trigger: GGGAGCCACACCTAGGAGCAAAGTCTCACCCCTTTG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAGCATAGACATGGGTCGGGCAGACCTTGTCTCCTTTCACGGCATCCCTCTGCTCATGGTTaGGGGAAGCAACGTAGACAA +
Preference number: 5 (lower is better)
Translates to: LGVEHRHGSGRPCLLSRHPSAHG*GKQRRQ
Trigger: TTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGG...ATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCATGTCTATGCTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAACGTAGACAAAGGGGGACCCGAGTCTGGTTaGGCATCGAAGTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: FGIEVPLLMVWGSNVDKGGPESG*ASKSLC
Trigger: GCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC...CCCTTTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTCATGAGGGAAGGCACTaGGGGGATAAGTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAHEGRH*GDKWGR
Trigger: CCTTCCCCACTTATCCCCCAAGTGCCTTCCCTCATG...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TGCGGGTCAGGCCGGCCCAGGCATGAGGGAAGGCACTTGGGGGATAAGTGGGGAGGTGGACTTGATTCTTaGCAATTCCTTCTACCATTA +
Preference number: 5 (lower is better)
Translates to: CGSGRPRHEGRHLGDKWGGGLDS*QFLLPL
Trigger: TAATGGTAGAAGGAATTGCAAAGAATCAAGTCCACC...TCCCCACTTATCCCCCAAGTGCCTTCCCTCATGCCTGGGCCGGCCTGACCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GCTAGGCTGGAACCAATGTGCCCTAAGCTTCCAGAGGCTCCGAAGGGCAGAGTGTCACAGGTGGGAGAGTaGATAGAGGCTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ARLEPMCPKLPEAPKGRVSQVGE*IEALVL
Trigger: CAAGACCAAAGCCTCTATCAACTCTCCCACCTGTGA...CACTCTGCCCTTCGGAGCCTCTGGAAGCTTAGGGCACATTGGTTCCAGCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612930.1
CDS GCA 90 bp GGCTGCTTTCACGGACTGGCGTTGAGTGTCTGCAGCTTTTCCAGGTaGACAGTGCAAGCTGTTAGTGGATCTGCCATTCTGCGGTCTAGA +
Preference number: 5 (lower is better)
Translates to: GCFHGLALSVCSFSR*TVQAVSGSAILRSR
Trigger: TCTAGACCGCAGAATGGCAGATCCACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCATGCTGGTGAGCAGGTaGTGGCTGAGATCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAMLVSR*WLRSRP
Trigger: TGGCCTGGATCTCAGCCACAACCTGCTCACCAGCAT...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp CAGTCATGCCACTGCCCGCAGGAACTTAGATTAGCCTTTTTCCTTCTCAAGGCCTGGGTCGGGCAGACCTaGTCTCCTTTCACGGCATTC +
Preference number: 5 (lower is better)
Translates to: QSCHCPQELRLAFFLLKAWVGQT*SPFTAF
Trigger: GAATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCA...GGCCTTGAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGCATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 90 bp AAAATGATCTCCTTTGACTCCATGTCCCGCATATCTGAGTCATGCTaGTGCAAGAGGTGGGTTCCCACAGTCTTGGGCAGCTCCACCCCC +
Preference number: 5 (lower is better)
Translates to: KMISFDSMSRISESC*CKRWVPTVLGSSTP
Trigger: GGGGGTGGAGCTGCCCAAGACTGTGGGAACCCACCTCTTGCATCAGCATGACTCAGATATGCGGGACATGGAGTCAAAGGAGATCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp AAGGGAAGCAGGAGGGGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCAACTGGTGTTGGCACATaGAACATAAGTTACTCGGGA +
Preference number: 5 (lower is better)
Translates to: KGSRRGPESGLASKSLCSTGVGT*NISYSG
Trigger: TCCCGAGTAACTTATGTTCAATGTGCCAACACCAGT...TGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCCCCTCCTGCTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTTGGGTCGGGCAGACCTaGTCTCCTTTCACGGCATTC +
Preference number: 5 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCWVGQT*SPFTAF
Trigger: GAATGCCGTGAAAGGAGACAAGGTCTGCCCGACCCA...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTGGGTTCCCACAGTCTaGGGCAGCTCCACCCCCGTG +
Preference number: 5 (lower is better)
Translates to: SFPICHMRRVDLILCNSFWVPTV*GSSTPV
Trigger: CACGGGGGTGGAGCTGCCCAAGACTGTGGGAACCCA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp CTCCTTTCACGGCATTCCTGGGAGGGTAAGAAGGGCTGTCGTGCTCAGGGCCAGGGTGGACTTGATTCTTaGCAATTCCTTCTACCATTA +
Preference number: 5 (lower is better)
Translates to: LLSRHSWEGKKGCRAQGQGGLDS*QFLLPL
Trigger: TAATGGTAGAAGGAATTGCAAAGAATCAAGTCCACC...CTGGCCCTGAGCACGACAGCCCTTCTTACCCTCCCAGGAATGCCGTGAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp AGTTTCCCCATCTGTCACATGAGAAGGGTGGACTTGATTCTTTGCAATTCCTTCTCCACCCCCGTGGCTTaGCAGGGTGCAGCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SFPICHMRRVDLILCNSFSTPVA*QGAASF
Trigger: AAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGA...GAAGGAATTGCAAAGAATCAAGTCCACCCTTCTCATGTGACAGATGGGGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 90 bp GGAAGGTCTAACAATCATGGTGGAAGGCAAAAGGCACTTCTTACATaGCGGCGGCAAGAGAGAATGAGGAGGAAGCAAAAGCTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GRSNNHGGRQKALLT*RRQERMRRKQKLKP
Trigger: GGGCTTCAGCTTTTGCTTCCTCCTCATTCTCTCTTGCCGCCGCCATGTAAGAAGTGCCTTTTGCCTTCCACCATGATTGTTAGACCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp TTGAACATAAGTTACTCGGGACCTGAGGCAGCCCAGGACAGCAGTCTGTTATGTCCCTCTGCTCATGGTTaGGGGAAGCAACGTAGACAA +
Preference number: 5 (lower is better)
Translates to: LNISYSGPEAAQDSSLLCPSAHG*GKQRRQ
Trigger: TTGTCTACGTTGCTTCCCCAAACCATGAGCAGAGGG...ACATAACAGACTGCTGTCCTGGGCTGCCTCAGGTCCCGAGTAACTTATGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTGAGATACAATTCAAGTaGAGATTTGGGTGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVAEIQFK*RFGCGH
Trigger: GTGCCCGCACCCAAATCTCAACTTGAATTGTATCTC...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS TCA 90 bp GACTTATTCACTATCACGAGAATAGCTCGGGAAAGACTGGCCCCATaGTTCAATTACCTCCCACTGGGTCCCTCCCACAACACATGGGAA +
Preference number: 5 (lower is better)
Translates to: DLFTITRIARERLAP*FNYLPLGPSHNTWE
Trigger: TTCCCATGTGTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGCCAGTCTTTCCCGAGCTATTCTCGTGATAGTGAATAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS-3UTR CAA 90 bp GGTTTGGGGAAGCAACGTAGACAAAGGGGTGAGACTTTGCTCCTAGGTGTGGCTACTGGTGTTGGCACATaGAACATAAGTTACTCGGGA +
Preference number: 5 (lower is better)
Translates to: GLGKQRRQRGETLLLGVATGVGT*NISYSG
Trigger: TCCCGAGTAACTTATGTTCAATGTGCCAACACCAGT...AGCCACACCTAGGAGCAAAGTCTCACCCCTTTGTCTACGTTGCTTCCCCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS-3UTR CAA 90 bp GGACCCGAGTCTGGTTTGGCATCGAAGTCCCTCTGCTCATGGTTTGGGGAAGCAGGTGGACTTGATTCTTaGCAATTCCTTCTACCATTA +
Preference number: 5 (lower is better)
Translates to: GPESGLASKSLCSWFGEAGGLDS*QFLLPL
Trigger: TAATGGTAGAAGGAATTGCAAAGAATCAAGTCCACC...TGCTTCCCCAAACCATGAGCAGAGGGACTTCGATGCCAAACCAGACTCGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 90 bp GCAGCAAACTTTTGCCTGGGCATCCAGGTGTTTCCATACATCTTCTaGAATCTAGGCAGAGGTTCCCAAACCTCAATTCTTGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: AANFCLGIQVFPYIF*NLGRGSQTSILDFC
Trigger: ACAGAAGTCAAGAATTGAGGTTTGGGAACCTCTGCCTAGATTTCAGAAGATGTATGGAAACACCTGGATGCCCAGGCAAAAGTTTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS TCA 90 bp GTTCAAAATCCAGCAGGGCAGTCAAATCTTATTAAAGTTCCAAAATaGTCTCCTTTGACTCCATGTCCCGCATATCTGAGTCATGCTGAT +
Preference number: 5 (lower is better)
Translates to: VQNPAGQSNLIKVPK*SPLTPCPAYLSHAD
Trigger: ATCAGCATGACTCAGATATGCGGGACATGGAGTCAAAGGAGATCATTTTGGAACTTTAATAAGATTTGACTGCCCTGCTGGATTTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp GTGCCCTCCCGCACCAGGCGCCGGCACCGCACATCCTaGCCCACGCTGACGCTCTGCAGTGCCGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VPSRTRRRHRTS*PTLTLCSAGRW
Trigger: CCACCTCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCGGCGCCTGGTGCGGGAGGGCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp GCACCAGGCGCCGGCACCGCACATCCTGGCCCACGCTaGCGCTCTGCAGTGCCGGGAGGTGGAGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: APGAGTAHPGPR*RSAVPGGGGAA
Trigger: CGCTGCTCCTCCACCTCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCGGCGCCTGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp GGCCGGCCCTCGTGGGGTGGGGCACGAGGCGGTGAATaGGGTTGTGGGAGAGGTCCACGTGTAGTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: GRPSWGGARGGE*GCGRGPRVVPG
Trigger: GCCGGGCACTACACGTGGACCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCACCCCACGAGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp GGCAGGCCGGCCCTCGTGGGGTGGGGCACGAGGCGGTaGATGAGGTTGTGGGAGAGGTCCACGTGTAGTGCC +
Preference number: 6 (lower is better)
Translates to: GRPALVGWGTRR*MRLWERSTCSA
Trigger: GGCACTACACGTGGACCTCTCCCACAACCTCATTCACCGCCTCGTGCCCCACCCCACGAGGGCCGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 72 bp GAAGGTCTCCACCTCGCATTGGCACCCGGGGAAGCATaGCCGGGTTGTCTGGGCCCCACTCACGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: EGLHLALAPGEA*PGCLGPTHGQQ
Trigger: CTGCTGGCCGTGAGTGGGGCCCAGACAACCCGGCCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS GCA 72 bp CAGTTAAGCTTGGGGTTGCCCGACAGGTCCAGGACCTaGAGGCCCGGTAGCTCACGGAAGCCACTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: QLSLGLPDRSRT*RPGSSRKPLGA
Trigger: GGCGCCCAGTGGCTTCCGTGAGCTACCGGGCCTGCAGGTCCTGGACCTGTCGGGCAACCCCAAGCTTAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 72 bp TGGGCTGTGTCCAGAGGGATGGGCACCGGCATGATGTaGGGGCCCAGGCCGCTACAATCCACCCGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: WAVSRGMGTGMM*GPRPLQSTRVR
Trigger: CCTGACTCGGGTGGATTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCCCATCCCTCTGGACACAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 72 bp CCAGGCTCAGGTAGCGCAGGGGCAAGTCTCGGAGGTTaGGCACGGCATGGAGCCGGTTCCAGGCCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: PGSGSAGASLGG*ARHGAGSRPGS
Trigger: TGAACCTGGCCTGGAACCGGCTCCATGCCGTGCCCAACCTCCGAGACTTGCCCCTGCGCTACCTGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp GGGGGCCCAGGCCGCTACAATCCACCCGAGTCAGGCTaGAGCTGTCGAAAAGGCCGAAGGTCTCCACCTCGC +
Preference number: 6 (lower is better)
Translates to: GGPGRYNPPESG*SCRKGRRSPPR
Trigger: GCGAGGTGGAGACCTTCGGCCTTTTCGACAGCTTCAGCCTGACTCGGGTGGATTGTAGCGGCCTGGGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS GCA 72 bp AGTCTTGGGCAGCTCCACCCCCGTGGCTTTGCAGGGTaGAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCG +
Preference number: 6 (lower is better)
Translates to: SLGQLHPRGFAG*SLLSGCFHGLA
Trigger: CGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGAGCTGCCCAAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp AAGCTGTCGAAAAGGCCGAAGGTCTCCACCTCGCATTaGCACCCGGGGAAGCATGGCCGGGTTGTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: KLSKRPKVSTSH*HPGKHGRVVWA
Trigger: GGCCCAGACAACCCGGCCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGACCTTCGGCCTTTTCGACAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 72 bp GGTGGGTTCCCACAGTCTTGGGCAGCTCCACCCCCGTaGCTTTGCAGGGTGCAGCCTCCTTTCTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: GGFPQSWAAPPP*LCRVQPPFWLL
Trigger: AAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGAGCTGCCCAAGACTGTGGGAACCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CAA 72 bp GAAGCTGTCGAAAAGGCCGAAGGTCTCCACCTCGCATaGGCACCCGGGGAAGCATGGCCGGGTTGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: EAVEKAEGLHLA*APGEAWPGCLG
Trigger: GCCCAGACAACCCGGCCATGCTTCCCCGGGTGCCAATGCGAGGTGGAGACCTTCGGCCTTTTCGACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CAA 90 bp GCAGCCCAGGACAGCAGTCTGTTATGTGGCCCTGGGCCACACCATTaGTCACAAGATGGTGGGGCCCCTGGCAGCAGAATCCCGGGTGTC +
Preference number: 6 (lower is better)
Translates to: AAQDSSLLCGPGPHH*SQDGGAPGSRIPGV
Trigger: GACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACATAACAGACTGCTGTCCTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp GAGCTGGTTGTGGCTAAGGTTCACGTCGCTCAGGGGTaGGCTGGTGAAGCTCTCGGCTGGCAGGGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: ELVVAKVHVAQG*AGEALGWQGCQ
Trigger: CTGACAGCCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGAGCGACGTGAACCTTAGCCACAACCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS TCA 72 bp TGCCCGGCCCTGACTGTGCGTCGTGAAGGCAGACACTaGGACCTCCCGGAGCTGGTTGTGGCTAAGGTTCAC +
Preference number: 6 (lower is better)
Translates to: CPALTVRREGRH*DLPELVVAKVH
Trigger: GTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACGACGCACAGTCAGGGCCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS TCA 72 bp AGGTTGTGGGAGAGGTCCACGTGTAGTGCCCGGCCCTaGCTGTGCGTCGTGAAGGCAGACACTGAGACCTCC +
Preference number: 6 (lower is better)
Translates to: RLWERSTCSARP*LCVVKADTETS
Trigger: GGAGGTCTCAGTGTCTGCCTTCACGACGCACAGTCAGGGCCGGGCACTACACGTGGACCTCTCCCACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS GCA 72 bp TTCCCACAGTCTTGGGCAGCTCCACCCCCGTGGCTTTaGAGGGTGCAGCCTCCTTTCTGGCTGCTTTCACGG +
Preference number: 6 (lower is better)
Translates to: FPQSWAAPPPWL*RVQPPFWLLSR
Trigger: CCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGGAGCTGCCCAAGACTGTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp TGGGCCACACCATTTGTCACAAGATGGTGGGGCCCCTaGCAGCAGAATCCCGGGTGTCTACGCAGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: WATPFVTRWWGP*QQNPGCLRSAG
Trigger: CCCTGCACTGCGTAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 72 bp ATGTGGCCCTGGGCCACACCATTTGTCACAAGATGGTaGGGCCCCTGGCAGCAGAATCCCGGGTGTCTACGC +
Preference number: 6 (lower is better)
Translates to: MWPWATPFVTRW*GPWQQNPGCLR
Trigger: GCGTAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CCA 72 bp CCACCCCCGTGGCTTTGCAGGGTGCAGCCTCCTTTCTaGCTGCTTTCACGGACTGGCGTTGAGTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PPPWLCRVQPPF*LLSRTGVECLQ
Trigger: CTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAAGCCACGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CAA 72 bp CCCGCCAACACCGACTCATTCACCATCTCCAGCCGGTaGGAGGACAGGTCCAAGTGGGCTGTGTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PANTDSFTISSR*EDRSKWAVSRG
Trigger: CCCTCTGGACACAGCCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGGTGAATGAGTCGGTGTTGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 72 bp CCGCCAACACCGACTCATTCACCATCTCCAGCCGGTTaGAGGACAGGTCCAAGTGGGCTGTGTCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PPTPTHSPSPAG*RTGPSGLCPEG
Trigger: TCCCTCTGGACACAGCCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGGTGAATGAGTCGGTGTTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333090.5
ENST00000525167.1
ENST00000527881.1
ENST00000533752.1
ENST00000612930.1
CDS CCA 72 bp TGCGTCGTGAAGGCAGACACTGAGACCTCCCGGAGCTaGTTGTGGCTAAGGTTCACGTCGCTCAGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: CVVKADTETSRS*LWLRFTSLRGE
Trigger: CTCACCCCTGAGCGACGTGAACCTTAGCCACAACCAGCTCCGGGAGGTCTCAGTGTCTGCCTTCACGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS GCA 72 bp GGATGGTGCCCCTCTTCTCACAGCTCCACTAGGCGGTaGCCCAGTAGGGACTCTACTCCAACCCCACATTTC +
Preference number: 6 (lower is better)
Translates to: GWCPSSHSSTRR*PSRDSTPTPHF
Trigger: GAAATGTGGGGTTGGAGTAGAGTCCCTACTGGGGCACCGCCTAGTGGAGCTGTGAGAAGAGGGGCACCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS GCA 72 bp GTTAGTGGATCTGCCATTCTGCGGTCTAGAGGATGGTaGCCCTCTTCTCACAGCTCCACTAGGCGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: VSGSAILRSRGW*PSSHSSTRRCP
Trigger: GGGGCACCGCCTAGTGGAGCTGTGAGAAGAGGGGCACCATCCTCTAGACCGCAGAATGGCAGATCCACTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp GTTATGTGGCCCTGGGCCACACCATTTGTCACAAGATaGTGGGGCCCCTGGCAGCAGAATCCCGGGTGTCTA +
Preference number: 6 (lower is better)
Translates to: VMWPWATPFVTR*WGPWQQNPGCL
Trigger: TAGACACCCGGGATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS GCA 72 bp GGGCCTCGGGGTGCAGAAATTGGGCAATGTACCTCCTaGAGTGGCCCAGACTTGTTAACACACCCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: GPRGAEIGQCTS*SGPDLLTHPVC
Trigger: GCAGACTGGGTGTGTTAACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS CCA 72 bp GCTGTTAGTGGATCTGCCATTCTGCGGTCTAGAGGATaGTGCCCCTCTTCTCACAGCTCCACTAGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: AVSGSAILRSRG*CPSSHSSTRRC
Trigger: GCACCGCCTAGTGGAGCTGTGAGAAGAGGGGCACCATCCTCTAGACCGCAGAATGGCAGATCCACTAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp AGCGGAGCCTGTCTCCCTACCAAACAGACGCAACTCTaGATCACACTCTTTCCAAGAAGCGCGGGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SGACLPTKQTQL*ITLFPRSAGRA
Trigger: TGCCCTCCCCGCGCTTCTTGGAAAGAGTGTGATCCAGAGTTGCGTCTGTTTGGTAGGGAGACAGGCTCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525167.1
CDS CAA 72 bp GACAGCAGTCTGTTATGTGGCCCTGGGCCACACCATTaGTCACAAGATGGTGGGGCCCCTGGCAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: DSSLLCGPGPHH*SQDGGAPGSRI
Trigger: GATTCTGCTGCCAGGGGCCCCACCATCTTGTGACAAATGGTGTGGCCCAGGGCCACATAACAGACTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333090.5
ENST00000527881.1
ENST00000612930.1
CDS CAA 72 bp TGCAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCGTaGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAA +
Preference number: 6 (lower is better)
Translates to: CSLLSGCFHGLA*SVCSFSRCTVQ
Trigger: TTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CAA 90 bp TTTGCAGGGTGCAGCCTCCTTTCTGGCTGCTTTCACGGACTGGCGTaGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTGTTAGT +
Preference number: 6 (lower is better)
Translates to: FAGCSLLSGCFHGLA*SVCSFSRCTVQAVS
Trigger: ACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAGGAGGCTGCACCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS TCA 72 bp TCCTTTGACTCCATGTCCCGCATATCTGAGTCATGCTaGTGCAAGAGGTGGGTTCCCACAGTCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SFDSMSRISESC*CKRWVPTVLGS
Trigger: GCTGCCCAAGACTGTGGGAACCCACCTCTTGCATCAGCATGACTCAGATATGCGGGACATGGAGTCAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS GCA 72 bp CACGGACTGGCGTTGAGTGTCTGCAGCTTTTCCAGGTaGACAGTGCAAGCTGTTAGTGGATCTGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: HGLALSVCSFSR*TVQAVSGSAIL
Trigger: CAGAATGGCAGATCCACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp TCGGGGTGCAGAAATTGGGCAATGTACCTCCTGCAGTaGCCCAGACTTGTTAACACACCCAGTCTGCTTGCT +
Preference number: 6 (lower is better)
Translates to: SGCRNWAMYLLQ*PRLVNTPSLLA
Trigger: AGCAAGCAGACTGGGTGTGTTAACAAGTCTGGGCCACTGCAGGAGGTACATTGCCCAATTTCTGCACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533752.1
CDS TCA 72 bp ACTATCACGAGAATAGCTCGGGAAAGACTGGCCCCATaGTTCAATTACCTCCCACTGGGTCCCTCCCACAAC +
Preference number: 6 (lower is better)
Translates to: TITRIARERLAP*FNYLPLGPSHN
Trigger: GTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGCCAGTCTTTCCCGAGCTATTCTCGTGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS GCA 72 bp CTTTCTGGCTGCTTTCACGGACTGGCGTTGAGTGTCTaGAGCTTTTCCAGGTGCACAGTGCAAGCTGTTAGT +
Preference number: 6 (lower is better)
Translates to: LSGCFHGLALSV*SFSRCTVQAVS
Trigger: ACTAACAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGTCCGTGAAAGCAGCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp TCCATGAGGGTCCCACCCCTGCAGCAAACTTTTGCCTaGGCATCCAGGTGTTTCCATACATCTTCTGAAATC +
Preference number: 6 (lower is better)
Translates to: SMRVPPLQQTFA*ASRCFHTSSEI
Trigger: GATTTCAGAAGATGTATGGAAACACCTGGATGCCCAGGCAAAAGTTTGCTGCAGGGGTGGGACCCTCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp AACAATCATGGTGGAAGGCAAAAGGCACTTCTTACATaGCGGCGGCAAGAGAGAATGAGGAGGAAGCAAAAG +
Preference number: 6 (lower is better)
Translates to: NNHGGRQKALLT*RRQERMRRKQK
Trigger: CTTTTGCTTCCTCCTCATTCTCTCTTGCCGCCGCCATGTAAGAAGTGCCTTTTGCCTTCCACCATGATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp ATGGGAATACTGGGAGATACAATTCAAGTTGAGATTTaGGTGCGGGCACAGCTAAACCATATCATTCCACCC +
Preference number: 6 (lower is better)
Translates to: MGILGDTIQVEI*VRAQLNHIIPP
Trigger: GGGTGGAATGATATGGTTTAGCTGTGCCCGCACCCAAATCTCAACTTGAATTGTATCTCCCAGTATTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CCA 72 bp TTCAATTACCTCCCACTGGGTCCCTCCCACAACACATaGGAATACTGGGAGATACAATTCAAGTTGAGATTT +
Preference number: 6 (lower is better)
Translates to: FNYLPLGPSHNT*EYWEIQFKLRF
Trigger: AAATCTCAACTTGAATTGTATCTCCCAGTATTCCCATGTGTTGTGGGAGGGACCCAGTGGGAGGTAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS TCA 72 bp ACAACACATGGGAATACTGGGAGATACAATTCAAGTTaGGATTTGGGTGCGGGCACAGCTAAACCATATCAT +
Preference number: 6 (lower is better)
Translates to: TTHGNTGRYNSS*DLGAGTAKPYH
Trigger: ATGATATGGTTTAGCTGTGCCCGCACCCAAATCTCAACTTGAATTGTATCTCCCAGTATTCCCATGTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527881.1
CDS CAA 72 bp GTTAGTTACTTCCTAGATACAGTGGGGGTACAGGCATaGGGTAAATACAGCTGTTCCACATGGAAGAAATTA +
Preference number: 6 (lower is better)
Translates to: VSYFLDTVGVQA*GKYSCSTWKKL
Trigger: TAATTTCTTCCATGTGGAACAGCTGTATTTACCCAATGCCTGTACCCCCACTGTATCTAGGAAGTAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527881.1