Pregenerated sensors for TSKS (Homo sapiens)
Ensembl gene IDs: ENSG00000126467Ensembl transcript IDs: ENST00000246801.8, ENST00000358830.3, ENST00000599325.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGTCCCGCGCCGTCTGTGCCTGTTCGCGCTGTGCCCGCTCCCACTaGCCTAGGAAGCCGTCGACCCTGCCGCCCAGGCCCCCGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: KSRAVCACSRCARSH*PRKPSTLPPRPPSS Trigger: GCTGCTCGGGGGCCTGGGCGGCAGGGTCGACGGCTTCCTAGGCCAGTGGGAGCGGGCACAGCGCGAACAGGCACAGACGGCGCGGGACTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS GCA 90 bp | CGCTCCACCATGGTGCACAGCTCATCCGCCCGACCTCGCAGCTCCTaGAAGTCCCGCGCCGTCTGTGCCTGTTCGCGCTGTGCCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSTMVHSSSARPRSS*KSRAVCACSRCARS Trigger: GGAGCGGGCACAGCGCGAACAGGCACAGACGGCGCGGGACTTGCAGGAGCTGCGAGGTCGGGCGGATGAGCTGTGCACCATGGTGGAGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 90 bp | GCCTCTGCCCTGACGTGTTTGGCTAAGGCCTGGCGCTCCAGCTCCTaGGGAGAGGAGCGTAGGCGTAGCTGGGCTTGCTGGACTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ASALTCLAKAWRSSS*GEERRRSWACWTGL Trigger: CAGCCCAGTCCAGCAAGCCCAGCTACGCCTACGCTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTAGCCAAACACGTCAGGGCAGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599325.1 |
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| CDS CCA 90 bp | AGGGTGGAGCTCAGGGCCTCTGCCCTGACGTGTTTGGCTAAGGCCTaGCGCTCCAGCTCCTGGGGAGAGGAGCGTAGGCGTAGCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RVELRASALTCLAKA*RSSSWGEERRRSWA Trigger: AGCCCAGCTACGCCTACGCTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTAGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599325.1 |
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| CDS TCA 90 bp | GTGCAGGCCGAGGACCGTTTGAGGTTCAGGCACCAGTGCATGGGCTaGTGGGACATCTGGGGCTCCACCCCGTGGAACGACACGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VQAEDRLRFRHQCMG*WDIWGSTPWNDTAF Trigger: GAAGGCCGTGTCGTTCCACGGGGTGGAGCCCCAGATGTCCCATCAGCCCATGCACTGGTGCCTGAACCTCAAACGGTCCTCGGCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS TCA 90 bp | TGTCCCCGTGGAGTCAGTGGGCTCCATGGCGGCCAGGTTGAGCAGTaGCACGTTGGTGCAGGCCGAGGACCGTTTGAGGTTCAGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: CPRGVSGLHGGQVEQ*HVGAGRGPFEVQAP Trigger: TGGTGCCTGAACCTCAAACGGTCCTCGGCCTGCACCAACGTGTCACTGCTCAACCTGGCCGCCATGGAGCCCACTGACTCCACGGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS GCA 90 bp | TTCACCTCGTCCACTAGTGAGGTCAGTGCTCGGTCCAGCAGCTGCTaGAGGGACTCCGTAGACAACTGCGACCCCTGGCTGGCACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: FTSSTSEVSARSSSC*RDSVDNCDPWLAQR Trigger: CCGCTGTGCCAGCCAGGGGTCGCAGTTGTCTACGGAGTCCCTGCAGCAGCTGCTGGACCGAGCACTGACCTCACTAGTGGACGAGGTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 90 bp | ATCTTGTCTGTCAGCAGTAGGTTCTTGGCCCGCAGGGCCTCGTCTTaGGCCAGCCGAAGGGTGGAGCTCAGGGCCTCTGCCCTGACGTGT | + |
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Preference number: 5 (lower is better) Translates to: ILSVSSRFLARRASS*ASRRVELRASALTC Trigger: ACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAGGCCCTGCGGGCCAAGAACCTACTGCTGACAGACAAGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000246801.8 ENST00000358830.3 ENST00000599325.1 |
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| CDS GCA 90 bp | TGCTTCACCTCGTCCACTAGTGAGGTCAGTGCTCGGTCCAGCAGCTaGTGCAGGGACTCCGTAGACAACTGCGACCCCTGGCTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: CFTSSTSEVSARSSS*CRDSVDNCDPWLAQ Trigger: CTGTGCCAGCCAGGGGTCGCAGTTGTCTACGGAGTCCCTGCAGCAGCTGCTGGACCGAGCACTGACCTCACTAGTGGACGAGGTGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 90 bp | TGGCACAGCGGGCACAGTTGCCTTGGTGGGACCGATCCAGGTTCATaGAGAGGTCAGGCCCTCTTCGAGAGTTCTGAAATTGCCGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: WHSGHSCLGGTDPGS*RGQALFESSEIAAR Trigger: TCGGGCGGCAATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCCGCTGTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 90 bp | GGTGGAGGGGGAACTGGATTGCGGAGGGCAAAGGGTAGGGTCCCATaGGGCCCACATTTCTCCCTCAGAGTTTCCCATCATGCCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GGGGTGLRRAKGRVP*GPHFSLRVSHHALS Trigger: GCTCAAGGCATGATGGGAAACTCTGAGGGAGAAATGTGGGCCCCATGGGACCCTACCCTTTGCCCTCCGCAATCCAGTTCCCCCTCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599325.1 |
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| CDS CCA 90 bp | GCCCTCTTCGAGAGTTCTGAAATTGCCGCCCGAACTCCTCCAGAATaGGTTTCAGTGGGCCCAGCCCCTCCAGTTCGCTCCTCAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ALFESSEIAARTPPE*VSVGPAPPVRSSVK Trigger: CTTCACTGAGGAGCGAACTGGAGGGGCTGGGCCCACTGAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTCGAAGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS TCA 90 bp | GACCGATCCAGGTTCATGGAGAGGTCAGGCCCTCTTCGAGAGTTCTaGAATTGCCGCCCGAACTCCTCCAGAATGGGTTTCAGTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: DRSRFMERSGPLREF*NCRPNSSRMGFSGP Trigger: GGGCCCACTGAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATGAACCTGGATCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS TCA 90 bp | GTGGTGGTGGTGTCGGGGCAGGGAGTTCCACCTAAAAGTGTATCTTaGGTCCCTCGTGCATCTGACCTCCTCCCACAAATCCTGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: VVVVSGQGVPPKSVS*VPRASDLLPQILGL Trigger: CAGTCCCAGGATTTGTGGGAGGAGGTCAGATGCACGAGGGACTCAAGATACACTTTTAGGTGGAACTCCCTGCCCCGACACCACCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS GCA 90 bp | CCAGCAGTTCTCCTTGAGTTGAATGCAGTACCCCTCCAACTCTTCTaGCTCTTGCCGCCTTCTCTCCAGATTCTCGCTCAGCACAGAACA | + |
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Preference number: 5 (lower is better) Translates to: PAVLLELNAVPLQLF*LLPPSLQILAQHRT Trigger: TGTTCTGTGCTGAGCGAGAATCTGGAGAGAAGGCGGCAAGAGGCAGAAGAGTTGGAGGGGTACTGCATTCAACTCAAGGAGAACTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS GCA 90 bp | CCTCATTTGAATCCCTCTTATCAGCGAGTTCTAAGGATGACTATGTaGACGAAGGTGCAGTGTGGTGGTGGTGTCGGGGCAGGGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: PHLNPSYQRVLRMTM*TKVQCGGGVGAGSS Trigger: GGAACTCCCTGCCCCGACACCACCACCACACTGCACCTTCGTGCACATAGTCATCCTTAGAACTCGCTGATAAGAGGGATTCAAATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS GCA 90 bp | CTCCTGAAGTCCAGCTCGATTCTCTTTCTGGGACCTGAATGTGACTaGAGGGCAAGAGTCCCCCATCTGGGTGTTGGAGCCTCATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LLKSSSILFLGPECD*RARVPHLGVGASFE Trigger: TTCAAATGAGGCTCCAACACCCAGATGGGGGACTCTTGCCCTGCAGTCACATTCAGGTCCCAGAAAGAGAATCGAGCTGGACTTCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CCA 90 bp | TCAGCGAGTTCTAAGGATGACTATGTGCACGAAGGTGCAGTGTGGTaGTGGTGTCGGGGCAGGGAGTTCCACCTAAAAGTGTATCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SASSKDDYVHEGAVW*WCRGREFHLKVYLE Trigger: CTCAAGATACACTTTTAGGTGGAACTCCCTGCCCCGACACCACCACCACACTGCACCTTCGTGCACATAGTCATCCTTAGAACTCGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CCA 90 bp | TTATCAGCGAGTTCTAAGGATGACTATGTGCACGAAGGTGCAGTGTaGTGGTGGTGTCGGGGCAGGGAGTTCCACCTAAAAGTGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: LSASSKDDYVHEGAV*WWCRGREFHLKVYL Trigger: AAGATACACTTTTAGGTGGAACTCCCTGCCCCGACACCACCACCACACTGCACCTTCGTGCACATAGTCATCCTTAGAACTCGCTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CCA 72 bp | GCCGTCTGTGCCTGTTCGCGCTGTGCCCGCTCCCACTaGCCTAGGAAGCCGTCGACCCTGCCGCCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVCACSRCARSH*PRKPSTLPPRP Trigger: GGGCCTGGGCGGCAGGGTCGACGGCTTCCTAGGCCAGTGGGAGCGGGCACAGCGCGAACAGGCACAGACGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 72 bp | GTCAGCAGTAGGTTCTTGGCCCGCAGGGCCTCGTCTTaGGCCAGCCGAAGGGTGGAGCTCAGGGCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSRFLARRASS*ASRRVELRASA Trigger: GGCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAGGCCCTGCGGGCCAAGAACCTACTGCTGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000246801.8 ENST00000358830.3 ENST00000599325.1 |
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| CDS GCA 72 bp | ATGGTGCACAGCTCATCCGCCCGACCTCGCAGCTCCTaGAAGTCCCGCGCCGTCTGTGCCTGTTCGCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MVHSSSARPRSS*KSRAVCACSRC Trigger: ACAGCGCGAACAGGCACAGACGGCGCGGGACTTGCAGGAGCTGCGAGGTCGGGCGGATGAGCTGTGCACCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS GCA 72 bp | CGGTCCAGCAGCTGCTGCAGGGACTCCGTAGACAACTaGGACCCCTGGCTGGCACAGCGGGCACAGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSSSCCRDSVDN*DPWLAQRAQLP Trigger: AGGCAACTGTGCCCGCTGTGCCAGCCAGGGGTCGCAGTTGTCTACGGAGTCCCTGCAGCAGCTGCTGGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 72 bp | CTCAGGGCCTCTGCCCTGACGTGTTTGGCTAAGGCCTaGCGCTCCAGCTCCTGGGGAGAGGAGCGTAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: LRASALTCLAKA*RSSSWGEERRR Trigger: ACGCCTACGCTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTAGCCAAACACGTCAGGGCAGAGGCCCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599325.1 |
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| CDS CAA 72 bp | GTCCCCGTGGAGTCAGTGGGCTCCATGGCGGCCAGGTaGAGCAGTGACACGTTGGTGCAGGCCGAGGACCGT | + |
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Preference number: 6 (lower is better) Translates to: VPVESVGSMAAR*SSDTLVQAEDR Trigger: ACGGTCCTCGGCCTGCACCAACGTGTCACTGCTCAACCTGGCCGCCATGGAGCCCACTGACTCCACGGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS TCA 72 bp | TCCCCGTGGAGTCAGTGGGCTCCATGGCGGCCAGGTTaGGCAGTGACACGTTGGTGCAGGCCGAGGACCGTT | + |
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Preference number: 6 (lower is better) Translates to: SPWSQWAPWRPG*AVTRWCRPRTV Trigger: AACGGTCCTCGGCCTGCACCAACGTGTCACTGCTCAACCTGGCCGCCATGGAGCCCACTGACTCCACGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CCA 72 bp | TGCGACCCCTGGCTGGCACAGCGGGCACAGTTGCCTTaGTGGGACCGATCCAGGTTCATGGAGAGGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CDPWLAQRAQLP*WDRSRFMERSG Trigger: GCCTGACCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCCGCTGTGCCAGCCAGGGGTCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 72 bp | CTGCGACCCCTGGCTGGCACAGCGGGCACAGTTGCCTaGGTGGGACCGATCCAGGTTCATGGAGAGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRPLAGTAGTVA*VGPIQVHGEVR Trigger: CCTGACCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCCGCTGTGCCAGCCAGGGGTCGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 72 bp | GACAACTGCGACCCCTGGCTGGCACAGCGGGCACAGTaGCCTTGGTGGGACCGATCCAGGTTCATGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DNCDPWLAQRAQ*PWWDRSRFMER Trigger: CCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCCGCTGTGCCAGCCAGGGGTCGCAGTTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 90 bp | GTGGAGTCTGTCCCCGTGGAGTCAGTGGGCTCCATGGCGGCCAGGTaGAGCAGTGACACGTTGGTGCAGGCCGAGGACCGTTTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VESVPVESVGSMAAR*SSDTLVQAEDRLRF Trigger: GAACCTCAAACGGTCCTCGGCCTGCACCAACGTGTCACTGCTCAACCTGGCCGCCATGGAGCCCACTGACTCCACGGGGACAGACTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS TCA 72 bp | GAGGACCGTTTGAGGTTCAGGCACCAGTGCATGGGCTaGTGGGACATCTGGGGCTCCACCCCGTGGAACGAC | + |
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Preference number: 6 (lower is better) Translates to: EDRLRFRHQCMG*WDIWGSTPWND Trigger: GTCGTTCCACGGGGTGGAGCCCCAGATGTCCCATCAGCCCATGCACTGGTGCCTGAACCTCAAACGGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS TCA 72 bp | GGAGTCAGTGGGCTCCATGGCGGCCAGGTTGAGCAGTaGCACGTTGGTGCAGGCCGAGGACCGTTTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GVSGLHGGQVEQ*HVGAGRGPFEV Trigger: AACCTCAAACGGTCCTCGGCCTGCACCAACGTGTCACTGCTCAACCTGGCCGCCATGGAGCCCACTGACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS GCA 72 bp | GTGGGGGTGTCCCCGGCCTCATGGATCTCTTTGGACTaGCAGATCGTCTTCACCACCACGCTCGCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: VGVSPASWISLD*QIVFTTTLAMV Trigger: CACCATGGCGAGCGTGGTGGTGAAGACGATCTGGCAGTCCAAAGAGATCCATGAGGCCGGGGACACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS GCA 72 bp | ACAACTGCGACCCCTGGCTGGCACAGCGGGCACAGTTaGCTTGGTGGGACCGATCCAGGTTCATGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TTATPGWHSGHS*LGGTDPGSWRG Trigger: ACCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCCGCTGTGCCAGCCAGGGGTCGCAGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS GCA 72 bp | TCGTCCACTAGTGAGGTCAGTGCTCGGTCCAGCAGCTaGTGCAGGGACTCCGTAGACAACTGCGACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSTSEVSARSSS*CRDSVDNCDPW Trigger: CCAGGGGTCGCAGTTGTCTACGGAGTCCCTGCAGCAGCTGCTGGACCGAGCACTGACCTCACTAGTGGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CCA 72 bp | GAGAGTTCTGAAATTGCCGCCCGAACTCCTCCAGAATaGGTTTCAGTGGGCCCAGCCCCTCCAGTTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ESSEIAARTPPE*VSVGPAPPVRS Trigger: GGAGCGAACTGGAGGGGCTGGGCCCACTGAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 90 bp | ATCCAGGTTCATGGAGAGGTCAGGCCCTCTTCGAGAGTTCTGAAATaGCCGCCCGAACTCCTCCAGAATGGGTTTCAGTGGGCCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: IQVHGEVRPSSRVLK*PPELLQNGFQWAQP Trigger: GGGCTGGGCCCACTGAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATGAACCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 72 bp | TGGTCCAGAGTGGCCATCTTCTCCTCTGGCTTCATCTaGTCTGTCAGCAGTAGGTTCTTGGCCCGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WSRVAIFSSGFI*SVSSRFLARRA Trigger: GGCCCTGCGGGCCAAGAACCTACTGCTGACAGACAAGATGAAGCCAGAGGAGAAGATGGCCACTCTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS TCA 72 bp | GTGAGGACACCTCTCTCCTCAGCTCTTCGATGCCGGTaGACAGCTTCTGCAATTCCTGCTCGCTCACGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VRTPLSSALRCR*TASAIPARSRR Trigger: CCTACGTGAGCGAGCAGGAATTGCAGAAGCTGTTCACCGGCATCGAAGAGCTGAGGAGAGAGGTGTCCTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS GCA 72 bp | TCCAGCTCGATTCTCTTTCTGGGACCTGAATGTGACTaGAGGGCAAGAGTCCCCCATCTGGGTGTTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSILFLGPECD*RARVPHLGVGA Trigger: GGCTCCAACACCCAGATGGGGGACTCTTGCCCTGCAGTCACATTCAGGTCCCAGAAAGAGAATCGAGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CCA 72 bp | GGAGGGAGCACATCTTCAAGTGTAGATGGTCCAGAGTaGCCATCTTCTCCCTGTCATGAGGCAGCGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GGSTSSSVDGPE*PSSPCHEAAGS Trigger: ACTCCCCGCTGCCTCATGACAGGGAGAAGATGGCCACTCTGGACCATCTACACTTGAAGATGTGCTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599325.1 |
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| CDS CAA 90 bp | ACAGAACACTCGCTCTGCAGAGACTGCACGTGCTGGTTAACCCGGTaGGTCTTTTCCTTCAAGCTGGTGATGGAGTCTTTGGCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: TEHSLCRDCTCWLTR*VFSFKLVMESLART Trigger: GGTCCGCGCCAAAGACTCCATCACCAGCTTGAAGGAAAAGACCAACCGGGTTAACCAGCACGTGCAGTCTCTGCAGAGCGAGTGTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS TCA 72 bp | GTTCCCGTGGACCCCTCAAGTGGCAGGTTGCTGAGATaGTCGTGGAGGGAGCACATCTTCAAGTGTAGATGG | + |
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Preference number: 6 (lower is better) Translates to: VPVDPSSGRLLR*SWREHIFKCRW Trigger: CCATCTACACTTGAAGATGTGCTCCCTCCACGATCATCTCAGCAACCTGCCACTTGAGGGGTCCACGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000246801.8 ENST00000358830.3 ENST00000599325.1 |
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| CDS CCA 72 bp | GGGCACAGTTGCCTTGGTGGGACCGATCCAGGTTCATaGAGAGGTCAGGCCCTCTTCGAGAGTTCTGAAATT | + |
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Preference number: 6 (lower is better) Translates to: GHSCLGGTDPGS*RGQALFESSEI Trigger: AATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATGAACCTGGATCGGTCCCACCAAGGCAACTGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS CAA 72 bp | CGGTTGGTCTTTTCCTTCAAGCTGGTGATGGAGTCTTaGGCGCGGACCAATCCACTGTTGACCCCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RLVFSFKLVMES*ARTNPLLTPLR Trigger: CCTGAGTGGGGTCAACAGTGGATTGGTCCGCGCCAAAGACTCCATCACCAGCTTGAAGGAAAAGACCAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CAA 72 bp | CATGGAGAGGTCAGGCCCTCTTCGAGAGTTCTGAAATaGCCGCCCGAACTCCTCCAGAATGGGTTTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HGEVRPSSRVLK*PPELLQNGFQW Trigger: CCACTGAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS TCA 72 bp | AGGTTCATGGAGAGGTCAGGCCCTCTTCGAGAGTTCTaGAATTGCCGCCCGAACTCCTCCAGAATGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RFMERSGPLREF*NCRPNSSRMGF Trigger: GAAACCCATTCTGGAGGAGTTCGGGCGGCAATTTCAGAACTCTCGAAGAGGGCCTGACCTCTCCATGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246801.8 ENST00000358830.3 |
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| CDS TCA 72 bp | CCATTGTTCCCGTGGACCCCTCAAGTGGCAGGTTGCTaGGATGATCGTGGAGGGAGCACATCTTCAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: PLFPWTPQVAGC*DDRGGSTSSSV Trigger: TACACTTGAAGATGTGCTCCCTCCACGATCATCTCAGCAACCTGCCACTTGAGGGGTCCACGGGAACAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000246801.8 ENST00000358830.3 ENST00000599325.1 |
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| CDS TCA 72 bp | GTGTCGGGGCAGGGAGTTCCACCTAAAAGTGTATCTTaGGTCCCTCGTGCATCTGACCTCCTCCCACAAATC | + |
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Preference number: 6 (lower is better) Translates to: VSGQGVPPKSVS*VPRASDLLPQI Trigger: GATTTGTGGGAGGAGGTCAGATGCACGAGGGACTCAAGATACACTTTTAGGTGGAACTCCCTGCCCCGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS GCA 72 bp | CTCCTTGAGTTGAATGCAGTACCCCTCCAACTCTTCTaGCTCTTGCCGCCTTCTCTCCAGATTCTCGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLELNAVPLQLF*LLPPSLQILAQ Trigger: CTGAGCGAGAATCTGGAGAGAAGGCGGCAAGAGGCAGAAGAGTTGGAGGGGTACTGCATTCAACTCAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CCA 72 bp | AGCACAGAACACTCGCTCTGCAGAGACTGCACGTGCTaGTTAACCCGGTTGGTCTTTTCCTTCAAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: STEHSLCRDCTC*LTRLVFSFKLV Trigger: CACCAGCTTGAAGGAAAAGACCAACCGGGTTAACCAGCACGTGCAGTCTCTGCAGAGCGAGTGTTCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CAA 90 bp | TGGTTAACCCGGTTGGTCTTTTCCTTCAAGCTGGTGATGGAGTCTTaGGCGCGGACCAATCCACTGTTGACCCCACTCAGGATTTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: WLTRLVFSFKLVMES*ARTNPLLTPLRISV Trigger: CACGGAAATCCTGAGTGGGGTCAACAGTGGATTGGTCCGCGCCAAAGACTCCATCACCAGCTTGAAGGAAAAGACCAACCGGGTTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CAA 90 bp | GTTCTCCTTGAGTTGAATGCAGTACCCCTCCAACTCTTCTGCCTCTaGCCGCCTTCTCTCCAGATTCTCGCTCAGCACAGAACACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: VLLELNAVPLQLFCL*PPSLQILAQHRTLA Trigger: AGCGAGTGTTCTGTGCTGAGCGAGAATCTGGAGAGAAGGCGGCAAGAGGCAGAAGAGTTGGAGGGGTACTGCATTCAACTCAAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS GCA 72 bp | AATCCCTCTTATCAGCGAGTTCTAAGGATGACTATGTaGACGAAGGTGCAGTGTGGTGGTGGTGTCGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NPSYQRVLRMTM*TKVQCGGGVGA Trigger: TGCCCCGACACCACCACCACACTGCACCTTCGTGCACATAGTCATCCTTAGAACTCGCTGATAAGAGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CAA 72 bp | TCGCTCTGCAGAGACTGCACGTGCTGGTTAACCCGGTaGGTCTTTTCCTTCAAGCTGGTGATGGAGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLCRDCTCWLTR*VFSFKLVMESL Trigger: CAAAGACTCCATCACCAGCTTGAAGGAAAAGACCAACCGGGTTAACCAGCACGTGCAGTCTCTGCAGAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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| CDS CAA 90 bp | GTGACTGCAGGGCAAGAGTCCCCCATCTGGGTGTTGGAGCCTCATTaGAATCCCTCTTATCAGCGAGTTCTAAGGATGACTATGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: VTAGQESPIWVLEPH*NPSYQRVLRMTMCT Trigger: CGTGCACATAGTCATCCTTAGAACTCGCTGATAAGAGGGATTCAAATGAGGCTCCAACACCCAGATGGGGGACTCTTGCCCTGCAGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CAA 90 bp | TGGGACCTGAATGTGACTGCAGGGCAAGAGTCCCCCATCTGGGTGTaGGAGCCTCATTTGAATCCCTCTTATCAGCGAGTTCTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: WDLNVTAGQESPIWV*EPHLNPSYQRVLRM Trigger: CATCCTTAGAACTCGCTGATAAGAGGGATTCAAATGAGGCTCCAACACCCAGATGGGGGACTCTTGCCCTGCAGTCACATTCAGGTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CAA 72 bp | GGGCAAGAGTCCCCCATCTGGGTGTTGGAGCCTCATTaGAATCCCTCTTATCAGCGAGTTCTAAGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: GQESPIWVLEPH*NPSYQRVLRMT Trigger: AGTCATCCTTAGAACTCGCTGATAAGAGGGATTCAAATGAGGCTCCAACACCCAGATGGGGGACTCTTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CAA 72 bp | AATGTGACTGCAGGGCAAGAGTCCCCCATCTGGGTGTaGGAGCCTCATTTGAATCCCTCTTATCAGCGAGTT | + |
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Preference number: 6 (lower is better) Translates to: NVTAGQESPIWV*EPHLNPSYQRV Trigger: AACTCGCTGATAAGAGGGATTCAAATGAGGCTCCAACACCCAGATGGGGGACTCTTGCCCTGCAGTCACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358830.3 |
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| CDS CAA 72 bp | TTCTCCTCCAGCAGGGCAGAATTCTGCTTCAAGACGTaGGTTTTGATTTCAGCATCTTCCACAGACCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FSSSRAEFCFKT*VLISASSTDRV Trigger: GACCCGGTCTGTGGAAGATGCTGAAATCAAAACCAACGTCTTGAAGCAGAATTCTGCCCTGCTGGAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246801.8 |
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