RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSHZ2 (Homo sapiens)

Ensembl gene IDs: ENSG00000182463

Ensembl transcript IDs: ENST00000329613.7, ENST00000371497.10, ENST00000603338.2, ENST00000605656.2, ENST00000626626.1

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAGTGACATaGACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATC +
Preference number: 1 (lower is better)
Translates to: LFSKVNLSSHPSAVT*TVARRQFTCLTKFI
Trigger: GATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp ATCTTTAGGAGCTGTTGTAAAACACAGGAAGGCCAGGCTGTTGTGTaGAGTGTTTGCTGTTGTTATCCCACAGTGCCTAGGACAGTGTCT +
Preference number: 1 (lower is better)
Translates to: IFRSCCKTQEGQAVV*SVCCCYPTVPRTVS
Trigger: AGACACTGTCCTAGGCACTGTGGGATAACAACAGCAAACACTTCACACAACAGCCTGGCCTTCCTGTGTTTTACAACAGCTCCTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp AGCTGCAGCATTAAAATGAGGGACAGCCTCCAGCAAAATCATAATTaGACACACCCAGGTCCTCAATGTCAGCAGTTGGGTTTCCTGATG +
Preference number: 1 (lower is better)
Translates to: SCSIKMRDSLQQNHN*THPGPQCQQLGFLM
Trigger: CATCAGGAAACCCAACTGCTGACATTGAGGACCTGGGTGTGTTCAATTATGATTTTGCTGGAGGCTGTCCCTCATTTTAATGCTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp GCCCATAAACATCAGGTTCTGCAGAAAGGGATTACCAGAAAAGGCTaGTGCAGAACTTTCCACCCTGTAATGATCTCATCTTCTCGCGTT +
Preference number: 1 (lower is better)
Translates to: AHKHQVLQKGITRKG*CRTFHPVMISSSRV
Trigger: AACGCGAGAAGATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCTTTCTGCAGAACCTGATGTTTATGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp GCCACCCCGTTGTACTGTTGCTATTTTTCCTTGTGGGTGATTGATTaGTGGATGAGTGCTGACACTTCAATGAAGCTATTTCGACTGCCA +
Preference number: 1 (lower is better)
Translates to: ATPLYCCYFSLWVID*WMSADTSMKLFRLP
Trigger: TGGCAGTCGAAATAGCTTCATTGAAGTGTCAGCACTCATCCATCAATCAATCACCCACAAGGAAAAATAGCAACAGTACAACGGGGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp CATAAACATCAGGTTCTGCAGAAAGGGATTACCAGAAAAGGCTGCTaGAGAACTTTCCACCCTGTAATGATCTCATCTTCTCGCGTTCTC +
Preference number: 1 (lower is better)
Translates to: HKHQVLQKGITRKGC*RTFHPVMISSSRVL
Trigger: GAGAACGCGAGAAGATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCTTTCTGCAGAACCTGATGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp TCGTTTCAAGCAGGAAAGCCATCATTTCCAGTGGTTGTTTGTCTTTaGGCAGTGACAATGCGGCAAAGCCTTTGGAAATGTCAAATAGTG +
Preference number: 1 (lower is better)
Translates to: SFQAGKPSFPVVVCL*AVTMRQSLWKCQIV
Trigger: CACTATTTGACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGCTTGAAACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp ATAATTGAACACACCCAGGTCCTCAATGTCAGCAGTTGGGTTTCCTaGTGCAAATTACGATACGGTTTCAGATGGGAACAGTCTATTTCC +
Preference number: 1 (lower is better)
Translates to: IIEHTQVLNVSSWVS*CKLRYGFRWEQSIS
Trigger: GGAAATAGACTGTTCCCATCTGAAACCGTATCGTAATTTGCATCAGGAAACCCAACTGCTGACATTGAGGACCTGGGTGTGTTCAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp AATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATaGTGTGTATTTGGAGGATTTGCTGAACTACAAAATAGGGCCAAA +
Preference number: 1 (lower is better)
Translates to: NIISCCALCHQCLVT*CVFGGFAELQNRAK
Trigger: TTTGGCCCTATTTTGTAGTTCAGCAAATCCTCCAAATACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp CCTTGGAAGAGCCATTTTACTTGGAATATATTGTTCCAAAGGAAATaGACAGAGTCCTGTTGCAGAAATAGCGTTCCACCTGGTACTAGC +
Preference number: 1 (lower is better)
Translates to: PWKSHFTWNILFQRK*TESCCRNSVPPGTS
Trigger: GCTAGTACCAGGTGGAACGCTATTTCTGCAACAGGACTCTGTCCATTTCCTTTGGAACAATATATTCCAAGTAAAATGGCTCTTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp GAAAACTCTGAATTAGGAAGTTGGTTCCTCCCTAGATCCAGCAATTaGACGGGACTCATGCAGACAGACAAACTTGGTTCTTATAGTTTC +
Preference number: 1 (lower is better)
Translates to: ENSELGSWFLPRSSN*TGLMQTDKLGSYSF
Trigger: GAAACTATAAGAACCAAGTTTGTCTGTCTGCATGAGTCCCGTCCAATTGCTGGATCTAGGGAGGAACCAACTTCCTAATTCAGAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp ACAAACGTTCCCAGAGGGGTTATAAATAGGAAATGGACATTACCATaGAAAGTAAGCCTCCAAGTGTCTACATCTAGTGCAACCCACTTG +
Preference number: 1 (lower is better)
Translates to: TNVPRGVINRKWTLP*KVSLQVSTSSATHL
Trigger: CAAGTGGGTTGCACTAGATGTAGACACTTGGAGGCTTACTTTTCATGGTAATGTCCATTTCCTATTTATAACCCCTCTGGGAACGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp CCAGTGGTTGTTTGTCTTTGGGCAGTGACAATGCGGCAAAGCCTTTaGAAATGTCAAATAGTGACTGCATTGAAAGCTAATATTCAGGAT +
Preference number: 1 (lower is better)
Translates to: PVVVCLWAVTMRQSL*KCQIVTALKANIQD
Trigger: ATCCTGAATATTAGCTTTCAATGCAGTCACTATTTGACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp AAAAGGGTACTGTGGAGACGAGACAGCCCCATTGCAATTTATCAATaGAAATCTAATACCGCCCATAAGCAGAGAAGTGGAAATCAATAC +
Preference number: 1 (lower is better)
Translates to: KRVLWRRDSPIAIYQ*KSNTAHKQRSGNQY
Trigger: GTATTGATTTCCACTTCTCTGCTTATGGGCGGTATTAGATTTTCATTGATAAATTGCAATGGGGCTGTCTCGTCTCCACAGTACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000603338.2
3UTR GCA 90 bp TTTCAGCCAATCAAGATAATGATGATGATCAAGGTGCCCCACCACTaGATAGGAAAAGTCTTTGGCAGCAACATGGTTAAGCTTAACTAT +
Preference number: 1 (lower is better)
Translates to: FQPIKIMMMIKVPHH*IGKVFGSNMVKLNY
Trigger: ATAGTTAAGCTTAACCATGTTGCTGCCAAAGACTTTTCCTATGCAGTGGTGGGGCACCTTGATCATCATCATTATCTTGATTGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp AATGGACACCCTATTTCATGCTTTCTGTTGCTTCTAAAGCTAAGCTaGGTTTTAGAGCCCATAAACATCAGGTTCTGCAGAAAGGGATTA +
Preference number: 1 (lower is better)
Translates to: NGHPISCFLLLLKLS*VLEPINIRFCRKGL
Trigger: TAATCCCTTTCTGCAGAACCTGATGTTTATGGGCTCTAAAACGCAGCTTAGCTTTAGAAGCAACAGAAAGCATGAAATAGGGTGTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp CATTGCATTTGTTTGTTTTCTGCATCTCAACTAAGTTCAGCGGCTTaGGCCTGTGACATTAATTATGCAAGATTCAAACAACCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: HCICLFSASQLSSAA*ACDINYARFKQPSR
Trigger: CCTGCTTGGTTGTTTGAATCTTGCATAATTAATGTCACAGGCGCAAGCCGCTGAACTTAGTTGAGATGCAGAAAACAAACAAATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 90 bp TTAATTTTCATTTTTCAATTGGCCAAAGCAGAAGTCGACGTTGACTaGAATGAAGCCATTTGCAAAGCTAATGGTGTTGAGAGGCATGTC +
Preference number: 1 (lower is better)
Translates to: LIFIFQLAKAEVDVD*NEAICKANGVERHV
Trigger: GACATGCCTCTCAACACCATTAGCTTTGCAAATGGCTTCATTTCAGTCAACGTCGACTTCTGCTTTGGCCAATTGAAAAATGAAAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp GGTGGTGGAAGAATGGCGATACTTGAGGGTAATTTGCATTATATTTaGATGTCAGCCTCCTTTCCAATTCTAAAGTTCTTACTTATCAGA +
Preference number: 1 (lower is better)
Translates to: GGGRMAILEGNLHYI*MSASFPILKFLLIR
Trigger: TCTGATAAGTAAGAACTTTAGAATTGGAAAGGAGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCTTCCACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp TTTACTTGGAATATATTGTTCCAAAGGAAATGGACAGAGTCCTGTTaGAGAAATAGCGTTCCACCTGGTACTAGCATTTTAAAACAGTCC +
Preference number: 1 (lower is better)
Translates to: FTWNILFQRKWTESC*RNSVPPGTSILKQS
Trigger: GGACTGTTTTAAAATGCTAGTACCAGGTGGAACGCTATTTCTGCAACAGGACTCTGTCCATTTCCTTTGGAACAATATATTCCAAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp AAATCATTTGTATGCCGAAGGGTGTCAAGTAAAGGTGTCATTCCTTaGAAGAGCCATTTTACTTGGAATATATTGTTCCAAAGGAAATGG +
Preference number: 1 (lower is better)
Translates to: KSFVCRRVSSKGVIP*KSHFTWNILFQRKW
Trigger: CCATTTCCTTTGGAACAATATATTCCAAGTAAAATGGCTCTTCCAAGGAATGACACCTTTACTTGACACCCTTCGGCATACAAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 90 bp CTTTGGATTTACTGTGAAAAGTTTCAGAACATCATAGACTCTTACTaGCACATTGTCCATAGACCCTGGAAAATAACAGTGAAATTCATA +
Preference number: 1 (lower is better)
Translates to: LWIYCEKFQNIIDSY*HIVHRPWKITVKFI
Trigger: TATGAATTTCACTGTTATTTTCCAGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTTTTCACAGTAAATCCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 90 bp TTTGAGCAAGTTTCACAGAAGATGAACATTGTTCAGGGGTTTTCTTaGCTCAAACTCTGGTTTAACTTAATAATTCTTCTACTTTGCAGT +
Preference number: 1 (lower is better)
Translates to: FEQVSQKMNIVQGFS*LKLWFNLIILLLCS
Trigger: ACTGCAAAGTAGAAGAATTATTAAGTTAAACCAGAGTTTGAGCCAAGAAAACCCCTGAACAATGTTCATCTTCTGTGAAACTTGCTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACCCTCGGCAGTGACATaGACGGTTGCCAGGCGGCAA +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAPSAVT*TVARRQ
Trigger: TTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAACTCAATCCGATGATGTaGGGGGTATATTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQLNPMM*GVYFLS
Trigger: GGACAGAAAATATACCCCTCACATCATCGGATTGAG...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCGTGCAGGGGCAGGACTaGGCAATCCAGGTGCAACTG +
Preference number: 2 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIVQGQD*AIQVQL
Trigger: CAGTTGCACCTGGATTGCCCAGTCCTGCCCCTGCAC...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAACCTATTCTCCCAATTTaGAGTTCTCATAGACAGTGG +
Preference number: 2 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQPILPI*SSHRQW
Trigger: CCACTGTCTATGAGAACTGCAAATTGGGAGAATAGG...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATTGATGGATGAGTGCTaGCACTTCAATGAAGCTATT +
Preference number: 2 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQLMDEC*HFNEAI
Trigger: AATAGCTTCATTGAAGTGTCAGCACTCATCCATCAA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTTGTCAGAACTACATTTaGGCCGCTATTCCCTATGCC +
Preference number: 2 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFCQNYI*AAIPYA
Trigger: GGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACA...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp GCCCCCTTCGTTTCAAGCAGGAAAGCCATCATTTCCAGTGGTTGTTaGTCTTTGGGCAGTGACAATGCGGCAAAGCCTTTGGAAATGTCA +
Preference number: 2 (lower is better)
Translates to: APFVSSRKAIISSGC*SLGSDNAAKPLEMS
Trigger: TGACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGCTTGAAACGAAGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTAAGAAGGGTTCAGTGTaGGGGGATCCAGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: CKANGVERHVSAIPYQLGKKGSV*GDPGWK
Trigger: TTTCCAGCCTGGATCCCCTCACACTGAACCCTTCTT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTGAATATGCTGAGTGGTaGTGTATGCCCCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: CKANGVERHVSAIPYQLGEYAEW*CMPQCQ
Trigger: CTGGCACTGGGGCATACATCACCACTCAGCATATTC...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCACGTTCTCTCAGATTCTaGATTTCACCTATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: VPAQILFSKVNLSSHPSARSLRF*ISPILP
Trigger: TGGGAGAATAGGTGAAATGCAGAATCTGAGAGAACG...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTCCTGTTGTGCCCTGTaGCACCAGTGCCTTGTAACA +
Preference number: 2 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNSCCAL*HQCLVT
Trigger: TGTTACAAGGCACTGGTGGCACAGGGCACAACAGGA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp CAGCTATCTTTAGGAGCTGTTGTAAAACACAGGAAGGCCAGGCTGTaGTGTGAAGTGTTTGCTGTTGTTATCCCACAGTGCCTAGGACAG +
Preference number: 2 (lower is better)
Translates to: QLSLGAVVKHRKARL*CEVFAVVIPQCLGQ
Trigger: CTGTCCTAGGCACTGTGGGATAACAACAGCAAACACTTCACACAACAGCCTGGCCTTCCTGTGTTTTACAACAGCTCCTAAAGATAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATCCAGGCTGGAAAGTaGAAACTAAGGCATTCGTCC +
Preference number: 2 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPIQAGK*KLRHSS
Trigger: GGACGAATGCCTTAGTTTCCACTTTCCAGCCTGGAT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCATCAGAAGCAGGATGGTaGAACGAAGAAGGGTTCAGT +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVASEAGW*NEEGFS
Trigger: ACTGAACCCTTCTTCGTTGCACCATCCTGCTTCTGA...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATACCAGAAAAGGCTGCTaGAGAACTTTCCACCCTGTA +
Preference number: 2 (lower is better)
Translates to: VTCTVARRQFTCLTKFINTRKGC*RTFHPV
Trigger: TACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGT...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATTACCAGAAAAGGCTaGTGCAGAACTTTCCACCCT +
Preference number: 2 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPITRKG*CRTFHP
Trigger: AGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAAT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATCTGAGTGGTGATGTATaGCCCAGTGCCAGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDLSGDV*PSASPD
Trigger: ATCTGGGCTGGCACTGGGGCATACATCACCACTCAG...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTATGTCAGAAGCAGGATaGTGCAACGAAGAAGGGTTC +
Preference number: 2 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCMSEAG*CNEEGF
Trigger: GAACCCTTCTTCGTTGCACCATCCTGCTTCTGACAT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp TCTCGCTCTCACTGGTACCAAGAGGTGGTGGAAGAATGGCGATACTaGAGGGTAATTTGCATTATATTTGCATGTCAGCCTCCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: SRSHWYQEVVEEWRY*RVICIIFACQPPFQ
Trigger: TTGGAAAGGAGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCTTCCACCACCTCTTGGTACCAGTGAGAGCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACTATTGGCAGGGGACTaGTATCTAAATGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVALLAGD*YLNAGF
Trigger: GAAACCTGCATTTAGATATCAGTCCCCTGCCAATAG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTATAAACATCAGGTTCTaGAGAAAGGGATTACCAGAA +
Preference number: 2 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFINIRF*RKGLPE
Trigger: TTCTGGTAATCCCTTTCTGCAGAACCTGATGTTTAT...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTGCGTCTCCAAACTGTaGACTAGGTATGCAAGACTT +
Preference number: 2 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNCVSKL*TRYARL
Trigger: AAGTCTTGCATACCTAGTGCACAGTTTGGAGACGCA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTACCCCGTTGTACTGTTaGTATTTTTCCTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCTPLYC*YFSLWV
Trigger: CACCCACAAGGAAAAATAGCAACAGTACAACGGGGT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGAGGTGGTGGAAGAATaGCGATACTTGAGGGTAATT +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAEVVEE*RYLRVI
Trigger: AATTACCCTCAAGTATCGCCATTCTTCCACCACCTC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAATCTCAATTTGCAGCTaGTTGGTGGTCTTAGCTGGA +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAISICS*LVVLAG
Trigger: TCCAGCTAAGACCACCAACCAGCTGCAAATTGAGAT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCTGAAAGAAATTCTGTaGGGACTGTCTGGGTTATCC +
Preference number: 2 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNLKEIL*GLSGLS
Trigger: GGATAACCCAGACAGTCCCCACAGAATTTCTTTCAG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTAAGAAGGGTTCAGTGTaGGGGGATCCAGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: DGKATECKHLVRSVIFGFKKGSV*GDPGWK
Trigger: TTTCCAGCCTGGATCCCCTCACACTGAACCCTTCTT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
3UTR-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAACAGGCAGCCTCCTTaGGAAATGGTGAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDNRQPP*EMVRKR
Trigger: TCTCTTCCTCACCATTTCTCAAGGAGGCTGCCTGTT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCATATTCCCTATGCCCATaGGTAAATCCCATAAAAGCC +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAYSLCP*VNPIKA
Trigger: GGCTTTTATGGGATTTACTCATGGGCATAGGGAATA...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTACTGGGCAATCCAGGTaGAACTGTAATTGTTACACT +
Preference number: 2 (lower is better)
Translates to: ACLCYSVSARFQEGGSIATGQSR*NCNCYT
Trigger: AGTGTAACAATTACAGTTGCACCTGGATTGCCCAGT...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCCTAGTGCAACCCACTTaGACATTAGACTATGAAGAC +
Preference number: 2 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLILVQPT*TLDYED
Trigger: GTCTTCATAGTCTAATGTCCAAGTGGGTTGCACTAG...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGTTCAGGGGTTTTCTTaGCTCAAACTCTGGTTTAAC +
Preference number: 2 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNVQGFS*LKLWFN
Trigger: GTTAAACCAGAGTTTGAGCCAAGAAAACCCCTGAAC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp TTCGTTTCAAGCAGGAAAGCCATCATTTCCAGTGGTTGTTTGTCTTaGGGCAGTGACAATGCGGCAAAGCCTTTGGAAATGTCAAATAGT +
Preference number: 2 (lower is better)
Translates to: FVSSRKAIISSGCLS*GSDNAAKPLEMSNS
Trigger: ACTATTTGACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGCTTGAAACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTATAATTCTACATGGATaGGTGTGCAGTTTTCCCATG +
Preference number: 2 (lower is better)
Translates to: CKANGVERHVSAIPYQLGIILHG*VCSFPM
Trigger: CATGGGAAAACTGCACACTCATCCATGTAGAATTAT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGGACACCCTATTTCATaGTTTCTGTTGCTTCTAAAG +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAGHPIS*FLLLLK
Trigger: CTTTAGAAGCAACAGAAAGCATGAAATAGGGTGTCC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCAGTGCCTTGTAACATaGTGTGTATTTGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAQCLVT*CVFGGF
Trigger: AAATCCTCCAAATACACAGCATGTTACAAGGCACTG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTAGAAATGGGCATAGATaGCTATCTGTGATGAATCTG +
Preference number: 2 (lower is better)
Translates to: CKANGVERHVSAIPYQLGRNGHR*LSVMNL
Trigger: CAGATTCATCACAGATAGGCATCTATGCCCATTTCT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATACTGGTACCAAGAGGTaGTGGAAGAATGGCGATACT +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDTGTKR*WKNGDT
Trigger: AGTATCGCCATTCTTCCACCACCTCTTGGTACCAGT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTaGAATAGGTTAAGCAAAGACAGACCTCACTGTTCTCAATTCACT +
Preference number: 2 (lower is better)
Translates to: HLKTVPFQSSSIHFW*NRLSKDRPHCSQFT
Trigger: AGTGAATTGAGAACAGTGAGGTCTGTCTTTGCTTAACCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
3UTR CAA 90 bp CTGGTACCAAGAGGTGGTGGAAGAATGGCGATACTTGAGGGTAATTaGCATTATATTTGCATGTCAGCCTCCTTTCCAATTCTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: LVPRGGGRMAILEGN*HYICMSASFPILKF
Trigger: GAACTTTAGAATTGGAAAGGAGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCTTCCACCACCTCTTGGTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTAAGTTTCACAGAAGATaGACATTGTTCAGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAKFHRR*TLFRGF
Trigger: AAAACCCCTGAACAATGTTCATCTTCTGTGAAACTT...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGCCATCTCAATCCGATaGTGTGAGGGGTATATTTTC +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDAISIR*CEGYIF
Trigger: GAAAATATACCCCTCACATCATCGGATTGAGATGGC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGAAGAGAGGATAATGTaGAAAATGACATTTGGGGTT +
Preference number: 2 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAEERIM*KMTFGV
Trigger: AACCCCAAATGTCATTTTTCACATTATCCTCTCTTC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATACACATTCTAGTGTCTaGGGTGTTCGAAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDTHSSV*GVRKLK
Trigger: CTTGAGCTTTCGAACACCTCAGACACTAGAATGTGT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGAACTGGTTGGCCATTaGAATGACTGTATGATCACC +
Preference number: 2 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDELVGH*NDCMIT
Trigger: GGTGATCATACAGTCATTTCAATGGCCAACCAGTTC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGAAACAGATCTATCCTTaGGTCTCCAAACTGTGCACT +
Preference number: 2 (lower is better)
Translates to: HILVSEVFESSSIVLRNWKQIYP*VSKLCT
Trigger: AGTGCACAGTTTGGAGACGCAAGGATAGATCTGTTT...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTGGCATACATCTTAAGTaGCTCCAAACAAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: CKANGVERHVSAIPYQLGGIHLK*LQTKSF
Trigger: AAATGACTTTGTTTGGAGGCACTTAAGATGTATGCC...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGATCCAGGCTGGAAAGTaGAAACTAAGGCATTCGTCC +
Preference number: 2 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLIQAGK*KLRHSS
Trigger: GGACGAATGCCTTAGTTTCCACTTTCCAGCCTGGAT...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
3UTR-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTATGTCAGAAGCAGGATaGTGCAACGAAGAAGGGTTC +
Preference number: 2 (lower is better)
Translates to: DGKATECKHLVRSVIFGFMSEAG*CNEEGF
Trigger: GAACCCTTCTTCGTTGCACCATCCTGCTTCTGACAT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
3UTR-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTACTTCTCTGAAGACTaGCTGAACTTTCTGTACTTA +
Preference number: 2 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNYFSED*LNFLYL
Trigger: TAAGTACAGAAAGTTCAGCCAGTCTTCAGAGAAGTA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATCAGAAGCAGGATGGTaGAACGAAGAAGGGTTCAGT +
Preference number: 2 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLSEAGW*NEEGFS
Trigger: ACTGAACCCTTCTTCGTTGCACCATCCTGCTTCTGA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
3UTR-3UTR GCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTATAATATCAGCACCTTaGTTTTCATGTCAGAACTAC +
Preference number: 2 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAIISAP*FSCQNY
Trigger: GTAGTTCTGACATGAAAAGCAAGGTGCTGATATTAT...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGGACTGATATCTAAATaGAGGTTTCAGGTTCAAGAC +
Preference number: 2 (lower is better)
Translates to: HILVSEVFESSSIVLRNWGLISK*RFQVQD
Trigger: GTCTTGAACCTGAAACCTGCATTTAGATATCAGTCC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAGTTCTCATAGACAGTaGTGTGTGCTTAAAACTATT +
Preference number: 2 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCSSHRQ*CVLKTI
Trigger: AATAGTTTTAAGCACACACCACTGTCTATGAGAACT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGAAAGGTGTCATTCCTTaGAAGAGCCATTTTACTTGG +
Preference number: 2 (lower is better)
Translates to: HILVSEVFESSSIVLRNWKGVIP*KSHFTW
Trigger: CCAAGTAAAATGGCTCTTCCAAGGAATGACACCTTT...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 90 bp CAAATGTATTATATACAGCATGCAGGTGATAGAAAATTAGTGCGCTaGCACAGAAACATTCTACAGGCATGGTTGCAGTCATTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: QMYYIQHAGDRKLVR*HRNILQAWLQSFFF
Trigger: AAAGAAAAATGACTGCAACCATGCCTGTAGAATGTTTCTGTGCAAGCGCACTAATTTTCTATCACCTGCATGCTGTATATAATACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp AAGGTGAACCTTAGCAGCCATCCCTCGGCAGTGACATaGACGGTTGCCAGGCGGCAATTCACCTGTCTTACC +
Preference number: 3 (lower is better)
Translates to: KVNLSSHPSAVT*TVARRQFTCLT
Trigger: GGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGATGGCTGCTAAGGTTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp AGGGATGGGGAAGAAAAGGCAATCTCTCGCTCTCACTaGTACCAAGAGGTGGTGGAAGAATGGCGATACTTG +
Preference number: 3 (lower is better)
Translates to: RDGEEKAISRSH*YQEVVEEWRYL
Trigger: CAAGTATCGCCATTCTTCCACCACCTCTTGGTACCAGTGAGAGCGAGAGATTGCCTTTTCTTCCCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp AATGCACGGAAGGCTTACGCTCCCAGCCATCCAAGCTaGATTGTACTCAGGGAAAACAGCCTGGTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: NARKAYAPSHPS*IVLRENSLVFL
Trigger: AAGAAAAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAGCCTTCCGTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp AGGAGGAGTTCAATGAGTTCAATGTCAGAAGCAGGATaGTGCAACGAAGAAGGGTTCAGTGTGAGGGGATCC +
Preference number: 3 (lower is better)
Translates to: RRSSMSSMSEAG*CNEEGFSVRGS
Trigger: GGATCCCCTCACACTGAACCCTTCTTCGTTGCACCATCCTGCTTCTGACATTGAACTCATTGAACTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
3UTR TCA 72 bp AGCTGTTGTAAAACACAGGAAGGCCAGGCTGTTGTGTaGAGTGTTTGCTGTTGTTATCCCACAGTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: SCCKTQEGQAVV*SVCCCYPTVPR
Trigger: CCTAGGCACTGTGGGATAACAACAGCAAACACTTCACACAACAGCCTGGCCTTCCTGTGTTTTACAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAATTTCATGCTTTCTGTaGCTTCTAAAGCTAAGCTGC +
Preference number: 3 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAISCFL*LLKLSC
Trigger: GCAGCTTAGCTTTAGAAGCAACAGAAAGCATGAAAT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGACGAGACAGCCCCATaGCAATTTATCAATGAAAAT +
Preference number: 3 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFDETAP*QFINEN
Trigger: ATTTTCATTGATAAATTGCAATGGGGCTGTCTCGTC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATCACCCCGTTGTACTGTaGCTATTTTTCCTTGTGGGT +
Preference number: 3 (lower is better)
Translates to: VTCTVARRQFTCLTKFINHPVVL*LFFLVG
Trigger: ACCCACAAGGAAAAATAGCAACAGTACAACGGGGTG...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCCATTGTGGGCCAGTTaGGTAGGAAACAGAAACAAG +
Preference number: 3 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNPLWAS*VGNRNK
Trigger: CTTGTTTCTGTTTCCTACCAAACTGGCCCACAATGG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp GAATTAGGAAGTTGGTTCCTCCCTAGATCCAGCAATTaGACGGGACTCATGCAGACAGACAAACTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: ELGSWFLPRSSN*TGLMQTDKLGS
Trigger: AGAACCAAGTTTGTCTGTCTGCATGAGTCCCGTCCAATTGCTGGATCTAGGGAGGAACCAACTTCCTAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp GCAGGAAAGCCATCATTTCCAGTGGTTGTTTGTCTTTaGGCAGTGACAATGCGGCAAAGCCTTTGGAAATGT +
Preference number: 3 (lower is better)
Translates to: AGKPSFPVVVCL*AVTMRQSLWKC
Trigger: ACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTAATGGACATCTCAATTaGCAGCTGGTTGGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: CKANGVERHVSAIPYQLGNGHLN*QLVGGL
Trigger: AAGACCACCAACCAGCTGCAAATTGAGATGTCCATT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 72 bp TCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATaGGTAAATCCCATAAAAGCCACCCCGTTGTACTGT +
Preference number: 3 (lower is better)
Translates to: SELHLSRYSLCP*VNPIKATPLYC
Trigger: ACAGTACAACGGGGTGGCTTTTATGGGATTTACTCATGGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp CAGGTTCTGCAGAAAGGGATTACCAGAAAAGGCTGCTaGAGAACTTTCCACCCTGTAATGATCTCATCTTCT +
Preference number: 3 (lower is better)
Translates to: QVLQKGITRKGC*RTFHPVMISSS
Trigger: AGAAGATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCTTTCTGCAGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp CATCAGGTTCTGCAGAAAGGGATTACCAGAAAAGGCTaGTGCAGAACTTTCCACCCTGTAATGATCTCATCT +
Preference number: 3 (lower is better)
Translates to: HQVLQKGITRKG*CRTFHPVMISS
Trigger: AGATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCTTTCTGCAGAACCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp GGTTCCTCCCTAGATCCAGCAATTGGACGGGACTCATaGAGACAGACAAACTTGGTTCTTATAGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: GSSLDPAIGRDS*RQTNLVLIVSL
Trigger: CAAAGAAACTATAAGAACCAAGTTTGTCTGTCTGCATGAGTCCCGTCCAATTGCTGGATCTAGGGAGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTTCTTCGGTGGCACTTaGTTTTCTTGTGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNFFGGT*FSCDSE
Trigger: TTCACTGTCACAAGAAAACAAAGTGCCACCGAAGAA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 72 bp CTGTGGAGACGAGACAGCCCCATTGCAATTTATCAATaGAAATCTAATACCGCCCATAAGCAGAGAAGTGGA +
Preference number: 3 (lower is better)
Translates to: LWRRDSPIAIYQ*KSNTAHKQRSG
Trigger: TCCACTTCTCTGCTTATGGGCGGTATTAGATTTTCATTGATAAATTGCAATGGGGCTGTCTCGTCTCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000603338.2
3UTR TCA 72 bp TTTAAGTTATGTGGGAGTTCAAGATCAGATTGTTCATaGTTACGAAGGAGGACAGGATGGTGGCACCACAGG +
Preference number: 3 (lower is better)
Translates to: FKLCGSSRSDCS*LRRRTGWWHHR
Trigger: CCTGTGGTGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 72 bp ATTAAAATGAGGGACAGCCTCCAGCAAAATCATAATTaGACACACCCAGGTCCTCAATGTCAGCAGTTGGGT +
Preference number: 3 (lower is better)
Translates to: IKMRDSLQQNHN*THPGPQCQQLG
Trigger: ACCCAACTGCTGACATTGAGGACCTGGGTGTGTTCAATTATGATTTTGCTGGAGGCTGTCCCTCATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGACGCCTGTTAGCCCATaGTTCGTAACTATTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HILVSEVFESSSIVLRNWTPVSP*FVTIGR
Trigger: TCTTCCAATAGTTACGAACAATGGGCTAACAGGCGT...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp ATCAAGATAATGATGATGATCAAGGTGCCCCACCACTaGATAGGAAAAGTCTTTGGCAGCAACATGGTTAAG +
Preference number: 3 (lower is better)
Translates to: IKIMMMIKVPHH*IGKVFGSNMVK
Trigger: CTTAACCATGTTGCTGCCAAAGACTTTTCCTATGCAGTGGTGGGGCACCTTGATCATCATCATTATCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp GAGGTGGTGGAAGAATGGCGATACTTGAGGGTAATTTaGATTATATTTGCATGTCAGCCTCCTTTCCAATTC +
Preference number: 3 (lower is better)
Translates to: EVVEEWRYLRVI*IIFACQPPFQF
Trigger: GAATTGGAAAGGAGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCTTCCACCACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp ATAAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTaGCTTGTAACATGCTGTGTATTTGGAGGATTTGCT +
Preference number: 3 (lower is better)
Translates to: INIISCCALCHQ*LVTCCVFGGFA
Trigger: AGCAAATCCTCCAAATACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGAAGAATGGCGATACTaGAGGGTAATTTGCATTATA +
Preference number: 3 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNEEWRY*RVICII
Trigger: TATAATGCAAATTACCCTCAAGTATCGCCATTCTTC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAAGCTCAAGTATTGTATaGCGAAACTGGAATGTTTGT +
Preference number: 3 (lower is better)
Translates to: WEFKIRLFMITKEDRMVASSSIV*RNWNVC
Trigger: ACAAACATTCCAGTTTCGCAATACAATACTTGAGCT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 72 bp TTCAATGAAGCTATTTCGACTGCCATCTCAATCCGATaGTGTGAGGGGTATATTTTCTGTCCATGCCTCATT +
Preference number: 3 (lower is better)
Translates to: FNEAISTAISIR*CEGYIFCPCLI
Trigger: AATGAGGCATGGACAGAAAATATACCCCTCACATCATCGGATTGAGATGGCAGTCGAAATAGCTTCATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp CCTATTTCATGCTTTCTGTTGCTTCTAAAGCTAAGCTaGGTTTTAGAGCCCATAAACATCAGGTTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: PISCFLLLLKLS*VLEPINIRFCR
Trigger: TCTGCAGAACCTGATGTTTATGGGCTCTAAAACGCAGCTTAGCTTTAGAAGCAACAGAAAGCATGAAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp GTTTGTCTTTGGGCAGTGACAATGCGGCAAAGCCTTTaGAAATGTCAAATAGTGACTGCATTGAAAGCTAAT +
Preference number: 3 (lower is better)
Translates to: VCLWAVTMRQSL*KCQIVTALKAN
Trigger: ATTAGCTTTCAATGCAGTCACTATTTGACATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGTCCATAGACCCAAATaGTTAGTGAGGATGAAGAGA +
Preference number: 3 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLVHRPK*LVRMKR
Trigger: TCTCTTCATCCTCACTAACAATTTGGGTCTATGGAC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
3UTR-3UTR CAA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATTTTAATAGAATTTCCTaGTTGAAGGACGGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDFNRIS*LKDGAQ
Trigger: CTGAGCACCGTCCTTCAACAAGGAAATTCTATTAAA...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp AAATTAGTGCGCTTGCACAGAAACATTCTACAGGCATaGTTGCAGTCATTTTTCTTTGAAAATGACCGGTCT +
Preference number: 3 (lower is better)
Translates to: KLVRLHRNILQA*LQSFFFENDRS
Trigger: AGACCGGTCATTTTCAAAGAAAAATGACTGCAACCATGCCTGTAGAATGTTTCTGTGCAAGCGCACTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp TGTTTGTTTTCTGCATCTCAACTAAGTTCAGCGGCTTaGGCCTGTGACATTAATTATGCAAGATTCAAACAA +
Preference number: 3 (lower is better)
Translates to: CLFSASQLSSAA*ACDINYARFKQ
Trigger: TTGTTTGAATCTTGCATAATTAATGTCACAGGCGCAAGCCGCTGAACTTAGTTGAGATGCAGAAAACAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp AATATATTGTTCCAAAGGAAATGGACAGAGTCCTGTTaGAGAAATAGCGTTCCACCTGGTACTAGCATTTTA +
Preference number: 3 (lower is better)
Translates to: NILFQRKWTESC*RNSVPPGTSIL
Trigger: TAAAATGCTAGTACCAGGTGGAACGCTATTTCTGCAACAGGACTCTGTCCATTTCCTTTGGAACAATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR TCA 72 bp TTGTACTGTTGCTATTTTTCCTTGTGGGTGATTGATTaGTGGATGAGTGCTGACACTTCAATGAAGCTATTT +
Preference number: 3 (lower is better)
Translates to: LYCCYFSLWVID*WMSADTSMKLF
Trigger: AAATAGCTTCATTGAAGTGTCAGCACTCATCCATCAATCAATCACCCACAAGGAAAAATAGCAACAGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp AGAATGGCGATACTTGAGGGTAATTTGCATTATATTTaGATGTCAGCCTCCTTTCCAATTCTAAAGTTCTTA +
Preference number: 3 (lower is better)
Translates to: RMAILEGNLHYI*MSASFPILKFL
Trigger: TAAGAACTTTAGAATTGGAAAGGAGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR GCA 72 bp TTAATATTAGCTATTGGCAGGGGACTGATATCTAAATaGAGGTTTCAGGTTCAAGACAATTCATTGAACACA +
Preference number: 3 (lower is better)
Translates to: LILAIGRGLISK*RFQVQDNSLNT
Trigger: TGTGTTCAATGAATTGTCTTGAACCTGAAACCTGCATTTAGATATCAGTCCCCTGCCAATAGCTAATATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp AACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTaGATTTACTGTGAAAAGTTTCAGAACATCATAGAC +
Preference number: 3 (lower is better)
Translates to: NRMQAPCKVCNL*IYCEKFQNIID
Trigger: GTCTATGATGTTCTGAAACTTTTCACAGTAAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
3UTR TCA 72 bp CAGGAAATCAAAAAGTATATTTTACCCAAGATATTGTaGCATTTAGGAACCCTGAGCCAAATGGGAATTGTT +
Preference number: 3 (lower is better)
Translates to: QEIKKYILPKIL*HLGTLSQMGIV
Trigger: AACAATTCCCATTTGGCTCAGGGTTCCTAAATGTCACAATATCTTGGGTAAAATATACTTTTTGATTTCCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CCA 72 bp GTTTCACAGAAGATGAACATTGTTCAGGGGTTTTCTTaGCTCAAACTCTGGTTTAACTTAATAATTCTTCTA +
Preference number: 3 (lower is better)
Translates to: VSQKMNIVQGFS*LKLWFNLIILL
Trigger: TAGAAGAATTATTAAGTTAAACCAGAGTTTGAGCCAAGAAAACCCCTGAACAATGTTCATCTTCTGTGAAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAACGCCCTCACTGTGGCTaGAAGATGAGGCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQRPHCG*KMRPLR
Trigger: ACGAAGAGGCCTCATCTTTCAGCCACAGTGAGGGCG...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAAGTGACATGCACGGTTaGCAGGCGGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQSDMHG*QAAIHL
Trigger: CAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACT...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTCTCCAGTCCCACTTCTaGCGCCCCAGCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGLQSHF*RPSPEP
Trigger: CGGCTCGGGGCTGGGGCGCCAGAAGTGGGACTGGAG...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGGGGCCGGGGCGTGGTTaGCGAGGGCGCACCCATTGC +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMGPGRG*RGRTHC
Trigger: GCAATGGGTGCGCCCTCGCCAACCACGCCCCGGCCC...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATTGCCCTCTGATGTCTaGAAGAGGCTCGAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQLPSDV*KRLEAN
Trigger: GTTTGCCTCGAGCCTCTTCCAGACATCAGAGGGCAA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGTCTCCTCCGCCTCTTaGCCGGTGGCTCCTAGGACG +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNVSSAS*PVAPRT
Trigger: CGTCCTAGGAGCCACCGGGCAAGAGGCGGAGGAGAC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATAAGCCCGGGTTCGGATaGAAGGGACGAGGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINKPGFG*KGRGAH
Trigger: GTGCGCCCCTCGTCCCTTCCATCCGAACCCGGGCTT...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCCGCCTCTTGCCCGGTaGCTCCTAGGACGTCACTCG +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAPPLAR*LLGRHS
Trigger: CGAGTGACGTCCTAGGAGCCACCGGGCAAGAGGCGG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGGCCCGCTGTCTCTCTaGCCTCTCTGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNGPLSL*PLWVSS
Trigger: GGAGGAGACCCAGAGAGGCCAGAGAGACAGCGGGCC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGTCCCCTCCACCCTTTaGGCCATCTTCCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFVPSTL*AIFQVF
Trigger: GAAGACTTGGAAGATGGCTCAAAGGGTGGAGGGGAC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCCTGGACACGCTGGCTaGCCTTGTGGAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCPGHAG*PCGGRT
Trigger: AGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAGG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATGTCAGAACTACATTTaGGCCGCTATTCCCTATGCC +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQCQNYI*AAIPYA
Trigger: GGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTTGCCGCCCGCTTGGGTaGCTGCTGTTTTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGCRPLG*LLFSPR
Trigger: CCGAGGAGAAAACAGCAGGCACCCAAGCGGGCGGCA...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATCTCGGCATCCTGATTaGACAAATGACTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQSRHPD*TNDFLE
Trigger: CTCCAGGAAGTCATTTGTCCAATCAGGATGCCGAGA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAGGCTGCGTGGATGCTaGGGTAGGCACTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCRLRGC*GRHSSW
Trigger: CCAGCTGGAGTGCCTACCCCAGCATCCACGCAGCCT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGTGGGCTCCAGGGGCTaGGGTTTCTCCTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCVGSRG*GFSFSL
Trigger: CAGCGAGAAGGAGAAACCCCAGCCCCTGGAGCCCAC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCTGCAGGGCGCTGAGTaGGTTGATGCATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNLQGAE*VDAWQG
Trigger: GCCCTGCCATGCATCAACCCACTCAGCGCCCTGCAG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGGTGGCAGACACGGGTaGCTTGTGCCGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCGGRHG*LVPAAL
Trigger: CAAAGCAGCCGGCACAAGCCACCCGTGTCTGCCACC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATAGCCTGCCGCCCGCTTaGGTGCCTGCTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNSLPPA*VPAVFS
Trigger: GGAGAAAACAGCAGGCACCCAAGCGGGCGGCAGGCT...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAGAGGTTTTGCCATGTTaGCCAGGTTGGTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQEVLPC*PGWSET
Trigger: AGTTTCAGACCAACCTGGCCAACATGGCAAAACCTC...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTTCAGATCCCCGTCTGTaGGTGATATGCGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFSDPRL*VICERT
Trigger: TGTCCTCTCGCATATCACTCACAGACGGGGATCTGA...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGCCATCCCTCGGCAGTaGCATGCACGGTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWAIPRQ*HARLPG
Trigger: GCCTGGCAACCGTGCATGTCACTGCCGAGGGATGGC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGAAGGCAAGTTCTGCTaGAGGCTTTTGGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFEGKFC*RLLDRA
Trigger: CGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGCCCGCTTGGGTGCCTaGTGTTTTCTCCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCARLGA*CFLLGI
Trigger: GATGCCGAGGAGAAAACAGCAGGCACCCAAGCGGGC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCACCCAGCCATCCAAGCTaGATTGTACTCAGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAPSHPS*IVLREN
Trigger: GTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGG...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACCTGGAGGAGGAGGCTaGCTTTGGGGTGGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAPGGGG*LWGGGF
Trigger: AAAGCCACCACCCCAAAGCCAGCCTCCTCCTCCAGG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTCTCTCTGGCCTCTCTaGGTCTCCTCCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIASLWPL*VSSASC
Trigger: GCAAGAGGCGGAGGAGACCCAGAGAGGCCAGAGAGA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTCTTCGTTTGGAAGCCTaGCGTGAGTGTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFLRLEA*RECVLS
Trigger: AGAAAGCACACACTCACGTCAGGCTTCCAAACGAAG...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTCGAGAAGGCAAGTTCTaGTGCAGGCTTTTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFREGKF*CRLLDR
Trigger: TCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCG...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATGTGGGTGGTGAGCTaGTGCAAGGTGTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPMWVVS*CKVSWE
Trigger: CTCCCATGACACCTTGCAGCAGCTCACCACCCACAT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGCCCTCGGCAGTGACATaGACGGTTGCCAGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMPSAVT*TVARRQ
Trigger: TTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGG...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCGAAGGAGGACAGGATaGTGGCACCACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNRRRTG*WHHRTG
Trigger: TCCTGTCCTGTGGTGCCACCATCCTGTCCTCCTTCG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp CACGGAAGGCTTACGCTCCCAGCCATCCAAGCTGCATaGTACTCAGGGAAAACAGCCTGGTTTTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: HGRLTLPAIQAA*YSGKTAWFFFL
Trigger: TAGGAAGAAAAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAGCCTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTTGATGTCCGACACCTaGTCACTGGCGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIALMSDT*SLASLS
Trigger: GCTGAGTGACGCCAGTGATCAGGTGTCGGACATCAA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGCCAAGGCCCAGGCCTaGCCAGTAGGAATCCGACAG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDAKAQA*PVGIRQ
Trigger: CTGTCGGATTCCTACTGGTCAGGCCTGGGCCTTGGC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTACAACTGCACCGAGCTaGACAGGCTGGGTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGTTAPS*TGWVSR
Trigger: TCTCGAAACCCAGCCTGTTCAGCTCGGTGCAGTTGT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAACTGTGGCTGAAAGATaGGGCCTCTTCGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVATVAER*GLFVGT
Trigger: AGTCCCCACGAAGAGGCCTCATCTTTCAGCCACAGT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAACACATTCTAGTGTCTaGGGTGTTCGAAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSATHSSV*GVRKLK
Trigger: CTTGAGCTTTCGAACACCTCAGACACTAGAATGTGT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCCTGAAGCAGCCTTTTTaGTCTGGGCCCGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPLKQPF*SGPVSS
Trigger: GCTAGAAACGGGCCCAGAGCAAAAAGGCTGCTTCAG...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCTCCCGCACATCTTGCTaGTCTGTCGGTACAACTGCA +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPSRTSC*SVGTTA
Trigger: TGCAGTTGTACCGACAGAGCAGCAAGATGTGCGGGA...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCCAGTCCCGCACATCTTaGTGCTCTGTCGGTACAACT +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPQSRTS*CSVGTT
Trigger: AGTTGTACCGACAGAGCAGCAAGATGTGCGGGACTG...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGGTAGGCTGCGTGGATaGTGGGGTAGGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLGRLRG*WGRHSS
Trigger: GCTGGAGTGCCTACCCCAGCATCCACGCAGCCTACC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGCAAAGGCGGCTTGGTaGCCTCAGACAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWAKAAW*PQTAGR
Trigger: CCTACCAGCTGTCTGAGGGCACCAAGCCGCCTTTGC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGACAGGGCGAGGCGATaGCAGCAAACATCGATCCCG +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWDRARR*QQTSIP
Trigger: CGGGATCGATGTTTGCTGGCATCGCCTCGCCCTGTC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTTGGACAGAGTCCTGTTaGAGAAATAGCGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFWTESC*RNSVPP
Trigger: AGGTGGAACGCTATTTCTGCAACAGGACTCTGTCCA...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCATCTGCTGCAGGCTTTTaGACAGAGCGTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVASAAGF*TERLGA
Trigger: GGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGA...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCGAATCGCCCTCACTGTaGCTGAAAGATGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPESPSL*LKDEAS
Trigger: AGAGGCCTCATCTTTCAGCCACAGTGAGGGCGATTC...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGAGTGGGTTGATGCATaGCAGGGCCGGGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLEWVDA*QGRGVV
Trigger: AACCACGCCCCGGCCCTGCCATGCATCAACCCACTC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAAGCGCAAGGGCTCCGTaGCTTTGCCCAAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVASARAP*LCPSDC
Trigger: ACAATCACTTGGGCAAAGCCACGGAGCCCTTGCGCT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCTGCTTGAACTTGGGCTaGAGCAGGAAGGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLICLNLG*SRKVSA
Trigger: TGCGCTCACCTTCCTGCTCCAGCCCAAGTTCAAGCA...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAGCGCCTGGACACGCTaGCTGACCTTGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDSAWTR*LTLWRQ
Trigger: CTGCCTCCACAAGGTCAGCCAGCGTGTCCAGGCGCT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTTCCACCTTGCTTTGCTaGTCCACTGACAAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGSTLLC*STDKRV
Trigger: GACCCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGA...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAGTTACAAACTGTGAATaGTGTTCGGGTGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAVTNCE*CSGDLL
Trigger: CAGCAAGTCACCCGAACACCATTCACAGTTTGTAAC...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCATTTTCCCTGAAGCTTTaGGCTGCCTTGTGCATGAAT +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAFSLKL*AALCMN
Trigger: ATTCATGCACAAGGCAGCCCAAAGCTTCAGGGAAAA...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGTGTGCTTTCTTGTCTaGGGCATCTCTGCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRVCFLV*GISAAD
Trigger: GTCTGCGGCAGAGATGCCTCAGACAAGAAAGCACAC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTTGTGCCGGCTGCTTTaGAGTAGAGGTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIALCRLL*SRGWFC
Trigger: GCAGAACCAACCTCTACTTCAAAGCAGCCGGCACAA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAACTCATTACTTCAGAATaGCATTCCTGGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQLITSE*HSWNFI
Trigger: AATGAAGTTCCAGGAATGTCATTCTGAAGTAATGAG...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCATATTCCCTATGCCCATaGGTAAATCCCATAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAYSLCP*VNPIKA
Trigger: GGCTTTTATGGGATTTACTCATGGGCATAGGGAATA...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGAATATGCTGAGTGGTaGTGTATGCCCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAEYAEW*CMPQCQ
Trigger: CTGGCACTGGGGCATACATCACCACTCAGCATATTC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGGTTGGCCATTGAAATaGCTGTATGATCACCTAGCT +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFGWPLK*LYDHLA
Trigger: AGCTAGGTGATCATACAGTCATTTCAATGGCCAACC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTAGCAGTTGGGTTTCCTaGTGCAAATTACGATACGGT +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFSSWVS*CKLRYG
Trigger: ACCGTATCGTAATTTGCATCAGGAAACCCAACTGCT...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCCGTCCCTGTGTCATTaGCACCCTGCAGTTGAGCTA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRPSLCH*HPAVEL
Trigger: TAGCTCAACTGCAGGGTGGCAATGACACAGGGACGG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCAGGGCTCCGTGGCTTTaGCCAAGTGATTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIRAPWL*PSDCSG
Trigger: TCCTGAACAATCACTTGGGCAAAGCCACGGAGCCCT...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTCTAAGGCATTCGTCCTaGAGAGCTATTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFLRHSS*RAILHP
Trigger: TGGATGAAGAATAGCTCTGCAGGACGAATGCCTTAG...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAATGGACATCTCAATTTaGAGCTGGTTGGTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAMDISI*SWLVVL
Trigger: TAAGACCACCAACCAGCTGCAAATTGAGATGTCCAT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCTGATGCTGAGTTACTaGATGGCTTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNLMLSY*MAWEPE
Trigger: CTCTGGCTCCCAAGCCATCCAGTAACTCAGCATCAG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGCAAACAGGTAGCGCCTaGACACGCTGGCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWQTGSA*TRWLTL
Trigger: CAAGGTCAGCCAGCGTGTCCAGGCGCTACCTGTTTG...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACCCGTTTTCCTAAGCTaGTACTTGACGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAPVFLS*YLTLAS
Trigger: GCTGGCCAACGTCAAGTACCAGCTTAGGAAAACGGG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATCTCTCGCTCTCACTaGTACCAAGAGGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPISRSH*YQEVVE
Trigger: TTCCACCACCTCTTGGTACCAGTGAGAGCGAGAGAT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATCTGCAGTTGAGCTACTaGACCGCTGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDLQLSY*TAVLLL
Trigger: GAGGAGGAGGACAGCGGTTCAGTAGCTCAACTGCAG...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTTGCCACCCTGCAGTTaGGCTACTGAACCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTLPPCS*ATEPLS
Trigger: GGACAGCGGTTCAGTAGCTCAACTGCAGGGTGGCAA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCCTTTTCCTGGGCTTTaGATAGCTCGTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRPFPGL*IARGSE
Trigger: CTCAGACCCACGAGCTATTCAAAGCCCAGGAAAAGG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGGGAACACGGCCGATTaGCATCAAAAACGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNGNTAD*HQKRVS
Trigger: AGAAACGCGTTTTTGATGTCAATCGGCCGTGTTCCC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATCATGGAAATTGTGCTTaGACTTGGGCTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINHGNCA*TWAGAG
Trigger: TCCTGCTCCAGCCCAAGTTCAAGCACAATTTCCATG...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCATCCTCAAAGCGCCTaGCATCCATTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNHPQSA*HPFPAS
Trigger: TGAAGCTGGAAATGGATGTCAGGCGCTTTGAGGATG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTGTTTCTGGAGACCTCTaGGCCGACGATACCCGGGAG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFVSGDL*ADDTRE
Trigger: CTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAAC...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR TCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTAACAGGCAGCCTCCTTaGGAAATGGTGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIANRQPP*EMVRKR
Trigger: TCTCTTCCTCACCATTTCTCAAGGAGGCTGCCTGTT...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGGGCTGCCTTGTGCATaGATAATTTTTGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFGLPCA*IIFGET
Trigger: TGTTTCTCCAAAAATTATTCATGCACAAGGCAGCCC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTCAGCAAAATCATAATTaGACACACCCAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFQQNHN*THPGPQ
Trigger: TTGAGGACCTGGGTGTGTTCAATTATGATTTTGCTG...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTGTCATAGGCCGCGCTaGACTGTCGGCATCGGAATC +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTCHRPR*TVGIGI
Trigger: GATTCCGATGCCGACAGTGCAGCGCGGCCTATGACA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATTTGTTCAGGACGGACTaGAGGGCGCTGAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDLFRTD*RALSGL
Trigger: CAACCCACTCAGCGCCCTGCAGTCCGTCCTGAACAA...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGTGGCTTGTGCCGGCTaGTTTGAAGTAGAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRVACAG*FEVEVG
Trigger: ACCAACCTCTACTTCAAAGCAGCCGGCACAAGCCAC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAAGGTGCCCCACCACTaGATAGGAAAAGTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCKVPHH*IGKVFG
Trigger: GCCAAAGACTTTTCCTATGCAGTGGTGGGGCACCTT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGCTGAGTGGTGATGTATaGCCCAGTGCCAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMLSGDV*PSASPD
Trigger: ATCTGGGCTGGCACTGGGGCATACATCACCACTCAG...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGCCCTGTGCCACCAGTaGCTTGTAACATGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRALCHQ*LVTCCV
Trigger: TACACAGCATGTTACAAGGCACTGGTGGCACAGGGC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCGGAAATGGTTGGGACTaGCTCCTTCAAAGGCACTTT +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPGNGWD*LLQRHF
Trigger: AAAGTGCCTTTGAAGGAGCCAGTCCCAACCATTTCC...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCAGAGAATCACTGTTTaGGGCCTCAGACAACGACTG +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCQRITV*GLRQRL
Trigger: CAGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCGCTGGCTGACCTTGTaGAGGCAGGACTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFRWLTL*RQDSRP
Trigger: CGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAGCG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGAAGGGGTTCTGAACTaGGAGGCACAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNREGVLN*EAQSLQ
Trigger: TTGCAGTGACTGTGCCTCCCAGTTCAGAACCCCTTC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGGCAGCTATTGTTTCTaGAGACCTCTGAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRGSYCF*RPLSRR
Trigger: TCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGTGAAAAGGGTACTGTaGAGACGAGACAGCCCCATT +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAVKRVL*RRDSPI
Trigger: AATGGGGCTGTCTCGTCTCCACAGTACCCTTTTCAC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAGTGCAGGGGCAGGACTaGGCAATCCAGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLVQGQD*AIQVQL
Trigger: CAGTTGCACCTGGATTGCCCAGTCCTGCCCCTGCAC...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCCTAGATCCAGCAATTaGACGGGACTCATGCAGACA +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCPRSSN*TGLMQT
Trigger: TGTCTGCATGAGTCCCGTCCAATTGCTGGATCTAGG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTTTGGAAGCCTGACGTaGGTGTGTGCTTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNFGSLT*VCAFLS
Trigger: AGACAAGAAAGCACACACTCACGTCAGGCTTCCAAA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTCTTCTGACTCTTTCTTaGCTTGAGTGTAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGLLTLS*LECKGP
Trigger: TGGCCCCTTACACTCAAGTCAAGAAAGAGTCAGAAG...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATATCCCCGTCTGTGAGTaGTATGCGAGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDIPVCE*YARGQE
Trigger: CTCCTGTCCTCTCGCATATCACTCACAGACGGGGAT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCCTCTAGGAATATGCTaGGTGGTGATGTATGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRPLGIC*VVMYAP
Trigger: TGGGGCATACATCACCACTCAGCATATTCCTAGAGG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTAATCACTCTTGTTGCTaGCGTTTCGGGTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGNHSCC*RFGCHS
Trigger: ACTGTGACACCCGAAACGGCAGCAACAAGAGTGATT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCAAAATCACTCTTGTTaGTGCCGTTTCGGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNQNHSC*CRFGCH
Trigger: GTGACACCCGAAACGGCAGCAACAAGAGTGATTTTG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCTCTGTCGGTACAACTaGACCGAGCTGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLLCRYN*TELNRL
Trigger: CAGCCTGTTCAGCTCGGTGCAGTTGTACCGACAGAG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGGGTCTAATACCAGCTaGTTCCCTTTCTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRGSNTS*FPFLEA
Trigger: TGCCTCCAAGAAAGGGAAGCAGCTGGTATTAGACCC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGAGGTGTTTCACTTTTaGGGAAAGAATCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCEVFHF*GKNRPH
Trigger: GTGAGGGCGATTCTTTCCGCAAAAGTGAAACACCTC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGGATTCCAGTTGGACTaGCGGCCTTTTCTTTTATGC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNGFQLD*RPFLLC
Trigger: GCATAAAAGAAAAGGCCGGCAGTCCAACTGGAATCC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGCTCCACCTTGCTTTaGTGGTCCACTGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLCSTLL*WSTDKR
Trigger: CCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGAGCA...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTACCCGGGAGATCTCTTaGTCCACCTTGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTTREIS*STLLCW
Trigger: CCAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGT...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGTCGGGTGACTTGCTGTaGGTTTTGCTTAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRSGDLL*VLLRWS
Trigger: ACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGA...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTCAGAAGCAGGATGGTaGAACGAAGAAGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNSEAGW*NEEGFS
Trigger: ACTGAACCCTTCTTCGTTGCACCATCCTGCTTCTGA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCACCAGAAAAGGCTGCTaGAGAACTTTCCACCCTGTA +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLITRKGC*RTFHPV
Trigger: TACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGT...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCTTGTTGAAGGACGGTaGTCAGTAGAGTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRLVEGR*SVESSP
Trigger: TGGACTGGACTCTACTGAGCACCGTCCTTCAACAAG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGGAAAGCCCTTTTCCTaGGCTTTGAATAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRGKPFS*ALNSSW
Trigger: CCACGAGCTATTCAAAGCCCAGGAAAAGGGCTTTCC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCTTTCGAGGAAATGGTTaGGACTGGCTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIFRGNG*DWLLQR
Trigger: CCTTTGAAGGAGCCAGTCCCAACCATTTCCTCGAAA...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCTGCAAAAGATCCTGTaGTTGAATCGGGGGAACACG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRLQKIL*LNRGNT
Trigger: CGTGTTCCCCCGATTCAACCACAGGATCTTTTGCAG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCGGATCTGCAGTACCTaGGATCCCATAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLRICST*DPIGKG
Trigger: GCCTTTGCCTATGGGATCCCAGGTACTGCAGATCCG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACATCACTTTCCACTTTaGTGCAATGGGCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAHHFPL*CNGPQL
Trigger: AAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCCAGCTCGGTCTTTTTaGCTTCTGGAGGTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRPARSF*LLEVFH
Trigger: GTGAAACACCTCCAGAAGCCAAAAAGACCGAGCTGG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGGAGGAGGCTGGCTTTaGGGTGGTGGCTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTGGGWL*GGGFGE
Trigger: CTCCCCAAAGCCACCACCCCAAAGCCAGCCTCCTCC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCAAAGAATCCCCATTGTaGGCCAGTTTGGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPKESPL*ASLVGN
Trigger: GTTTCCTACCAAACTGGCCCACAATGGGGATTCTTT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp AGCAGGAAAGCCATCATTTCCAGTGGTTGTTTGTCTTaGGGCAGTGACAATGCGGCAAAGCCTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SRKAIISSGCLS*GSDNAAKPLEM
Trigger: CATTTCCAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp GTTTCAAGCAGGAAAGCCATCATTTCCAGTGGTTGTTaGTCTTTGGGCAGTGACAATGCGGCAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VSSRKAIISSGC*SLGSDNAAKPL
Trigger: CAAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAACAACCACTGGAAATGATGGCTTTCCTGCTTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTGCCGCAGACACTCTTaGTGTCCGACACCTGATCAC +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFCRRHS*CPTPDH
Trigger: GTGATCAGGTGTCGGACATCAAGAGTGTCTGCGGCA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTGACAGAGCGTGCTTCTaGGGTGGGGACATACAAGAT +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTDRACF*GGDIQD
Trigger: ATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTC...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCTTTGGGGAGGACTTTaGCCATGTCGGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFLWGGL*PCRRCQ
Trigger: CTGACATCGCCGACATGGTCAAAGTCCTCCCCAAAG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTGCTTTGCTGGTCCACTaGCAAGCGGGTCATGTCCTT +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFALLVH*QAGHVL
Trigger: AAGGACATGACCCGCTTGTCAGTGGACCAGCAAAGC...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR TCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGGCTTTGCTGGTCCACTaGCAAGCGGGTCATGTCCTT +
Preference number: 4 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLALLVH*QAGHVL
Trigger: AAGGACATGACCCGCTTGTCAGTGGACCAGCAAAGC...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGTTTCTGGAGACCTCTaGGCCGACGATACCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTVSGDL*ADDTRE
Trigger: CTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAAC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAAGAAGGGTTCAGTGTaGGGGGATCCAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTKKGSV*GDPGWK
Trigger: TTTCCAGCCTGGATCCCCTCACACTGAACCCTTCTT...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGTGCTGACACTTCAATaGAGCTATTTCGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCVLTLQ*SYFDCH
Trigger: ATGGCAGTCGAAATAGCTTCATTGAAGTGTCAGCAC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGATCTGCGTATGCCTCTaGATCTGTCACTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMICVCL*ICHWEP
Trigger: TGGTTCCCAGTGACAGATTCAGAGGCATACGCAGAT...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTATCCATGCAATTGTGTaGTTCGTTTGGAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGIHAIV*FVWKPD
Trigger: GTCAGGCTTCCAAACGAAGCACACAATTGCATGGAT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGCCTCAGACAACGACTaGATTTTCTCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRASDND*IFSTAN
Trigger: GTTAGCAGTGGAGAAAATGCAGTCGTTGTCTGAGGC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTACCCGGGAGATCTCTTaGTCCACCTTGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFTREIS*STLLCW
Trigger: CCAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTATTACCAGAAAAGGCTaGTGCAGAACTTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGITRKG*CRTFHP
Trigger: AGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAAT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCTGCGTCTCCAAACTGTaGACTAGGTATGCAAGACTT +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLICVSKL*TRYARL
Trigger: AAGTCTTGCATACCTAGTGCACAGTTTGGAGACGCA...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTATCATTTCCTGTTGTaGCCTGTGCCACCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWYHFLL*PVPPVP
Trigger: AGGCACTGGTGGCACAGGGCACAACAGGAAATGATA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTTGGACAGAGCGTCTTaGTGCCAATCAAAATCACTC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNLDRAS*CQSKSL
Trigger: GAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGAAGTTGAGACTTCACTaGAGACATCCTCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRKLRLH*RHPQSA
Trigger: GGCGCTTTGAGGATGTCTCCAGTGAAGTCTCAACTT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGATGTCAGAAGCAGGATaGTGCAACGAAGAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRMSEAG*CNEEGF
Trigger: GAACCCTTCTTCGTTGCACCATCCTGCTTCTGACAT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGAGGTGGTGGAAGAATaGCGATACTTGAGGGTAATT +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAEVVEE*RYLRVI
Trigger: AATTACCCTCAAGTATCGCCATTCTTCCACCACCTC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAATTGTCCATAGACCCTaGAAAATAACAGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAIVHRP*KITVKF
Trigger: GAATTTCACTGTTATTTTCCAGGGTCTATGGACAAT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGGGAGTAAAAGAAATTaGGGTCAGCCAAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAGSKRN*GQPREE
Trigger: TTCTTCCCTTGGCTGACCCCAATTTCTTTTACTCCC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAAGGAGGACAGGATGGTaGCACCACAGGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLRRTGW*HHRTGK
Trigger: CTTTCCTGTCCTGTGGTGCCACCATCCTGTCCTCCT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTAATAGCTCGTGGGTCTaGGCTTGTCCTTTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLNSSWV*ACPFCG
Trigger: ACCGCAAAAAGGACAAGCTCAGACCCACGAGCTATT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCTCAATCCGATGATGTaGGGGGTATATTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRLNPMM*GVYFLS
Trigger: GGACAGAAAATATACCCCTCACATCATCGGATTGAG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTAAGAAATCTGTGACCTaGAAGAAATTCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAKKSVT*KKFCGD
Trigger: GTCCCCACAGAATTTCTTTCAGGTCACAGATTTCTT...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTTTGTCTTTGGGCAGTaGCAATGCGGCAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWFVFGQ*QCGKAF
Trigger: AAAGGCTTTGCCGCATTGTCACTGCCCAAAGACAAA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAGATTAGGCCGGATCTaGAGTACCTGGGATCCCATA +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDRLGRI*STWDPI
Trigger: TATGGGATCCCAGGTACTGCAGATCCGGCCTAATCT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGCACTTTCCACTTTGGTaGAATGGGCCTCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMHFPLW*NGPQLV
Trigger: AACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTG...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAGGGAGGCACAGTCACTaGAATAAAAGATGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLGRHSH*NKRWGG
Trigger: GCCACCCCATCTTTTATTGCAGTGACTGTGCCTCCC...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTGGGAGGCACAGTCACTaGAATAAAAGATGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFGRHSH*NKRWGG
Trigger: GCCACCCCATCTTTTATTGCAGTGACTGTGCCTCCC...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATGCTCCACCTTGCTTTaGTGGTCCACTGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLCSTLL*WSTDKR
Trigger: CCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGAGCA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR GCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTGGTGTTCGGGTGACTTaGTGTGCGTTTTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTGVRVT*CAFCLG
Trigger: ACCTAAGCAAAACGCACAGCAAGTCACCCGAACACC...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATCCTATTCTCCCAATTTaGAGTTCTCATAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINPILPI*SSHRQW
Trigger: CCACTGTCTATGAGAACTGCAAATTGGGAGAATAGG...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGACCCCGTTGTACTGTTaGTATTTTTCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRTPLYC*YFSLWV
Trigger: CACCCACAAGGAAAAATAGCAACAGTACAACGGGGT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTATCCTGTTGTGCCCTGTaGCACCAGTGCCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLSCCAL*HQCLVT
Trigger: TGTTACAAGGCACTGGTGGCACAGGGCACAACAGGA...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCATCATAGACTCTTACTaGCACATTGTCCATAGACCC +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIIIDSY*HIVHRP
Trigger: GGGTCTATGGACAATGTGGCAGTAAGAGTCTATGAT...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAACAGGCTTGAGCCACTaGACCTGGCCCCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTTGLSH*TWPPSF
Trigger: AAACGAAGGGGGCCAGGTGCAGTGGCTCAAGCCTGT...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATCTCAAGCAATTCTCTTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDLKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAG...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGACTTGGTCAGGTCAATaGGCTGATCGCTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMTWSGQ*ADRCSQ
Trigger: TTGAGAACAGCGATCAGCCCATTGACCTGACCAAGT...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAGCGTGCTTCTGAGGTaGGGACATACAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDSVLLR*GHTRLC
Trigger: GCACAATCTTGTATGTCCCCACCTCAGAAGCACGCT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTATTGCATACGCTCTTGTaGGCCCAGATCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLLHTLL*AQIRQQ
Trigger: CTGCTGTCTGATCTGGGCCCACAAGAGCGTATGCAA...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTTGCATACGCTCTTGTaGGCCCAGATCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFLHTLL*AQIRQQ
Trigger: CTGCTGTCTGATCTGGGCCCACAAGAGCGTATGCAA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGGAAGGGGTTCTGAACTaGGAGGCACAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLEGVLN*EAQSLQ
Trigger: TTGCAGTGACTGTGCCTCCCAGTTCAGAACCCCTTC...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATCCACCTTGCTTTGCTaGTCCACTGACAAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLSTLLC*STDKRV
Trigger: GACCCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCTAGTGCAACCCACTTaGACATTAGACTATGAAGAC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIALVQPT*TLDYED
Trigger: GTCTTCATAGTCTAATGTCCAAGTGGGTTGCACTAG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGTTCAGGGGTTTTCTTaGCTCAAACTCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAVQGFS*LKLWFN
Trigger: GTTAAACCAGAGTTTGAGCCAAGAAAACCCCTGAAC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGTCTGAATTAGGAAGTTaGTTCCTCCCTAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRSELGS*FLPRSS
Trigger: GCTGGATCTAGGGAGGAACCAACTTCCTAATTCAGA...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp CACTGGTACCAAGAGGTGGTGGAAGAATGGCGATACTaGAGGGTAATTTGCATTATATTTGCATGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HWYQEVVEEWRY*RVICIIFACQP
Trigger: AGGCTGACATGCAAATATAATGCAAATTACCCTCAAGTATCGCCATTCTTCCACCACCTCTTGGTACCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACATTTCAGAACCTTTTaGGCATCCTCTTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAHFRTF*ASSLSI
Trigger: TATGGACAAAGAGGATGCTCAAAAGGTTCTGAAATG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTCTTTTATGCAAAGTTaGGACTTCACTGGAGACATC +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNSFMQS*DFTGDI
Trigger: GATGTCTCCAGTGAAGTCTCAACTTTGCATAAAAGA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTAAAGAAGGGTTCAGTGTaGGGGGATCCAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLKKGSV*GDPGWK
Trigger: TTTCCAGCCTGGATCCCCTCACACTGAACCCTTCTT...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGATAGAATTTCCTTGTTaGAGGACGGTGCTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRIEFPC*RTVLSR
Trigger: TCTACTGAGCACCGTCCTTCAACAAGGAAATTCTAT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAGTGAAACATGGTTTTaGTTAAAACAGCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCSETWF*LKQPVG
Trigger: GCCAACAGGCTGTTTTAATCAAAACCATGTTTCACT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTGCTGCAGCATTAAAATaGGGGACAGCCTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFAAALK*GTASSK
Trigger: TTTGCTGGAGGCTGTCCCTCATTTTAATGCTGCAGC...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGAAGTCGACGTTGACTaGAATGAAGCCATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNREVDVD*NEAICK
Trigger: TTTGCAAATGGCTTCATTTCAGTCAACGTCGACTTC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACCCGTTTCATTCATGTaGACAGTCAGCTCGACTAGG +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLPVSFM*TVSSTR
Trigger: CCTAGTCGAGCTGACTGTGCACATGAATGAAACGGG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGAACATGGAAATTGTaGTTGAACTTGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDGTWKL*LNLGWS
Trigger: GCTCCAGCCCAAGTTCAAGCACAATTTCCATGTTCC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTAGGACTCGGCTTTCTTaGTTTTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLRTRLS*FWTWSG
Trigger: ACCTGACCAAGTCCAAAAGCAAGAAAGCCGAGTCCT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGATACAAGATTGTGCTTaGGAGGACTCGGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWIQDCA*EDSAFL
Trigger: CAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTAT...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGACATACAAGATTGTaGTTGCGAGGACTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDGHTRL*LRGLGF
Trigger: AAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATCAGACAGCAGGTATTTaGCCTCTGATGTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDQTAGI*PLMSGR
Trigger: TCTTCCAGACATCAGAGGGCAAATACCTGCTGTCTG...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGGTTTTACCGCATGTTTaGTCACAAATGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMVLPHV*SQMSDS
Trigger: GCTGTCGGACATTTGTGAGCAAACATGCGGTAAAAC...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTCGGGTGACTTGCTGTaGGTTTTGCTTAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFSGDLL*VLLRWS
Trigger: ACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGGGTGTTCGGGTGACTTaGTGTGCGTTTTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLGVRVT*CAFCLG
Trigger: ACCTAAGCAAAACGCACAGCAAGTCACCCGAACACC...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR GCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCACTTCTAAAGCTAAGCTaGGTTTTAGAGCCCATAAAC +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVALLKLS*VLEPIN
Trigger: GTTTATGGGCTCTAAAACGCAGCTTAGCTTTAGAAG...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACTTGTTGAAGGACGGTaGTCAGTAGAGTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLLVEGR*SVESSP
Trigger: TGGACTGGACTCTACTGAGCACCGTCCTTCAACAAG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCAGTGCCTTGTAACATaGTGTGTATTTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCQCLVT*CVFGGF
Trigger: AAATCCTCCAAATACACAGCATGTTACAAGGCACTG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATCTTTGGGCTGCCTTGTaGATGAATAATTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNLWAAL*MNNFWR
Trigger: TCTCCAAAAATTATTCATGCACAAGGCAGCCCAAAG...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCAGAAATGGGCATAGATaGCTATCTGTGATGAATCTG +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIRNGHR*LSVMNL
Trigger: CAGATTCATCACAGATAGGCATCTATGCCCATTTCT...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTGGACGCTCAAATCTTaGAGGGAATCAAAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTWTLKS*RESKES
Trigger: CGACTCCTTTGATTCCCTCCAAGATTTGAGCGTCCA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTAGCCATAGCGGTTGTTaGAGGACAACTGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFSHSGC*RTTASW
Trigger: CCAACTTGCAGTTGTCCTCCAACAACCGCTATGGCT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGGGCATAGAAACCAGTaGCATCACTTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLGHRNQ*HHFPLW
Trigger: CCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTCGGCTTTCTTGCTTTTaGACTTGGTCAGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTRLSCF*TWSGQW
Trigger: CCATTGACCTGACCAAGTCCAAAAGCAAGAAAGCCG...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTAGGCTCGAGGCAAACTaGGCTTGTAGAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLRLEAN*ACRIRR
Trigger: TCTTCTGATTCTACAAGCCCAGTTTGCCTCGAGCCT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATTGCCCTCTGATGTCTaGAAGAGGCTCGAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLLPSDV*KRLEAN
Trigger: GTTTGCCTCGAGCCTCTTCCAGACATCAGAGGGCAA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTACCCGTTTTCCTAAGCTaGTACTTGACGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLPVFLS*YLTLAS
Trigger: GCTGGCCAACGTCAAGTACCAGCTTAGGAAAACGGG...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTAGGCAGCTATTGTTTCTaGAGACCTCTGAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLGSYCF*RPLSRR
Trigger: TCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCC...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGACAGGAGCGGGTTTTaGAAAGACAGAAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWDRSGF*KDRKSG
Trigger: TCCAGATTTTCTGTCTTTCCAAAACCCGCTCCTGTC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGTTGTTCCAAAGGAAATaGACAGAGTCCTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRLFQRK*TESCCR
Trigger: TCTGCAACAGGACTCTGTCCATTTCCTTTGGAACAA...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTGTTTGGCCACAGGGTaGTATAATCTTCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWCLATG*YNLPSR
Trigger: TCTGCTAGGAAGATTATACCACCCTGTGGCCAAACA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGTGGTTGTTTGTCTTTaGGCAGTGACAATGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLVVVCL*AVTMRQ
Trigger: TTGCCGCATTGTCACTGCCCAAAGACAAACAACCAC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTCGATACGGTTTCAGATaGGAACAGTCTATTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CKANGVERHVSAIPYQLGRYGFR*EQSISN
Trigger: ATTGGAAATAGACTGTTCCCATCTGAAACCGTATCG...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp TTAGTGCGCTTGCACAGAAACATTCTACAGGCATGGTaGCAGTCATTTTTCTTTGAAAATGACCGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVRLHRNILQAW*QSFFFENDRSA
Trigger: AGCAGACCGGTCATTTTCAAAGAAAAATGACTGCAACCATGCCTGTAGAATGTTTCTGTGCAAGCGCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGTCAGGTCAATGGGCTaGTCGCTGTTCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTVRSMG*SLFSNR
Trigger: CCTGTTTGAGAACAGCGATCAGCCCATTGACCTGAC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATAAGTTTCACAGAAGATaGACATTGTTCAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINKFHRR*TLFRGF
Trigger: AAAACCCCTGAACAATGTTCATCTTCTGTGAAACTT...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTCTCAATCCGATGATGTaGGGGGTATATTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTLNPMM*GVYFLS
Trigger: GGACAGAAAATATACCCCTCACATCATCGGATTGAG...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTGCCATCTCAATCCGATaGTGTGAGGGGTATATTTTC +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTAISIR*CEGYIF
Trigger: GAAAATATACCCCTCACATCATCGGATTGAGATGGC...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTTGTGGGTGATTGATTaGTGGATGAGTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTLWVID*WMSADT
Trigger: AGTGTCAGCACTCATCCATCAATCAATCACCCACAA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGTATTCCCTATGCCCATaGGTAAATCCCATAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMYSLCP*VNPIKA
Trigger: GGCTTTTATGGGATTTACTCATGGGCATAGGGAATA...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGTCCCTCAAATGTCTTaGTATCAGCTATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRVPQMS*YQLSLG
Trigger: TCCTAAAGATAGCTGATATCAAGACATTTGAGGGAC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGTTACCCAAGATATTGTaGCATTTAGGAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMLPKIL*HLGTLS
Trigger: GCTCAGGGTTCCTAAATGTCACAATATCTTGGGTAA...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTGAACTGGTTGGCCATTaGAATGACTGTATGATCACC +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTELVGH*NDCMIT
Trigger: GGTGATCATACAGTCATTTCAATGGCCAACCAGTTC...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGATAATTCTACATGGATaGGTGTGCAGTTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRIILHG*VCSFPM
Trigger: CATGGGAAAACTGCACACTCATCCATGTAGAATTAT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGACAGAGCGTCTTGGTaGCAATCAAAATCACTCTTG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDDRASW*QSKSLL
Trigger: CAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGCAGACAGCAGGTATTTaGCCTCTGATGTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLQTAGI*PLMSGR
Trigger: TCTTCCAGACATCAGAGGGCAAATACCTGCTGTCTG...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGTTTTACCGCATGTTTaGTCACAAATGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLVLPHV*SQMSDS
Trigger: GCTGTCGGACATTTGTGAGCAAACATGCGGTAAAAC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTACTTGCTGTGCGTTTTaGTTAGGTGGAGTTTTACCG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLTCCAF*LGGVLP
Trigger: CGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATCCGGAGTTACATAAATaGTTCTCAGATATGTCATTG +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINPELHK*FSDMSL
Trigger: CAATGACATATCTGAGAAGCATTTATGTAACTCCGG...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGGCATACATCTTAAGTaGCTCCAAACAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNGIHLK*LQTKSF
Trigger: AAATGACTTTGTTTGGAGGCACTTAAGATGTATGCC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTCTTTGTCCATATCCTaGAAAGCCCTTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFSLSIS*KALFLG
Trigger: GCCCAGGAAAAGGGCTTTCCAGGATATGGACAAAGA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCCATTTTCGAGGAAATaGTTGGGACTGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFPFSRK*LGLAPS
Trigger: TGAAGGAGCCAGTCCCAACCATTTCCTCGAAAATGG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAAGTTACTGGATGGCTTaGGAGCCAGAGAATCACTGT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLSYWMA*EPENHC
Trigger: ACAGTGATTCTCTGGCTCCCAAGCCATCCAGTAACT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCATTGAGATTCGACTTGTaGAACATGGAAATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WEFKIRLFMITKEDRMVALRFDL*NMEIVL
Trigger: AAGCACAATTTCCATGTTCCACAAGTCGAATCTCAA...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAAGGCTCGAGGCAAACTaGGCTTGTAGAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLRLEAN*ACRIRR
Trigger: TCTTCTGATTCTACAAGCCCAGTTTGCCTCGAGCCT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGTTACAAACTGTGAATaGTGTTCGGGTGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLVTNCE*CSGDLL
Trigger: CAGCAAGTCACCCGAACACCATTCACAGTTTGTAAC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGAAAGACAGAAAATCTaGAATTCACTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAERQKI*NSLTHT
Trigger: TGTGTGAGTGAGTGAATTCCAGATTTTCTGTCTTTC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAACTGGTACCAAGAGGTaGTGGAAGAATGGCGATACT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLTGTKR*WKNGDT
Trigger: AGTATCGCCATTCTTCCACCACCTCTTGGTACCAGT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTATCTCAATTTGCAGCTaGTTGGTGGTCTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLISICS*LVVLAG
Trigger: TCCAGCTAAGACCACCAACCAGCTGCAAATTGAGAT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCTGAAAGAAATTCTGTaGGGACTGTCTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLLKEIL*GLSGLS
Trigger: GGATAACCCAGACAGTCCCCACAGAATTTCTTTCAG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGAAAGGTGTCATTCCTTaGAAGAGCCATTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRKGVIP*KSHFTW
Trigger: CCAAGTAAAATGGCTCTTCCAAGGAATGACACCTTT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAATGTCAGGAATGGCCTaGGGCCCCATTACAACAGCA +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTMSGMA*GPITTA
Trigger: TGCTGTTGTAATGGGGCCCCAGGCCATTCCTGACAT...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp TATATACAGCATGCAGGTGATAGAAAATTAGTGCGCTaGCACAGAAACATTCTACAGGCATGGTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YIQHAGDRKLVR*HRNILQAWLQS
Trigger: TGACTGCAACCATGCCTGTAGAATGTTTCTGTGCAAGCGCACTAATTTTCTATCACCTGCATGCTGTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGAGAGTTCTGGTAGCTaGAGCAGCCTTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTESSGS*SSLFAL
Trigger: CAGAGCAAAAAGGCTGCTTCAGCTACCAGAACTCTC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTACTGATAGTGGTCATTaGGAGTCCCGTAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTTDSGH*ESRKLR
Trigger: TCTAAGTTTACGGGACTCTCAATGACCACTATCAGT...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAGTGCTGACACTTCAATaGAGCTATTTCGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLVLTLQ*SYFDCH
Trigger: ATGGCAGTCGAAATAGCTTCATTGAAGTGTCAGCAC...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGTTGATGGATGAGTGCTaGCACTTCAATGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMLMDEC*HFNEAI
Trigger: AATAGCTTCATTGAAGTGTCAGCACTCATCCATCAA...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGAAGAGAGGATAATGTaGAAAATGACATTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNREERIM*KMTFGV
Trigger: AACCCCAAATGTCATTTTTCACATTATCCTCTCTTC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGCGGCCTTTTCTTTTATaGAAAGTTGAGACTTCACTG +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMRPFLL*KVETSL
Trigger: CAGTGAAGTCTCAACTTTGCATAAAAGAAAAGGCCG...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTACTTGCTGTGCGTTTTaGTTAGGTGGAGTTTTACCG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFTCCAF*LGGVLP
Trigger: CGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR GCA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATATAATATCAGCACCTTaGTTTTCATGTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: VTCTVARRQFTCLTKFINIISAP*FSCQNY
Trigger: GTAGTTCTGACATGAAAAGCAAGGTGCTGATATTAT...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAATTTGCATTATATTTaGATGTCAGCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCNLHYI*MSASFP
Trigger: TGGAAAGGAGGCTGACATGCAAATATAATGCAAATT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGTAAAATCATTTGTATaGCGAAGGGTGTCAAGTAAA +
Preference number: 4 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAVKSFV*RRVSSK
Trigger: TTTACTTGACACCCTTCGGCATACAAATGATTTTAC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGGGACTGATATCTAAATaGAGGTTTCAGGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMGLISK*RFQVQD
Trigger: GTCTTGAACCTGAAACCTGCATTTAGATATCAGTCC...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAATTGGACGGGACTCATaGAGACAGACAAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLIGRDS*RQTNLV
Trigger: AACCAAGTTTGTCTGTCTGCATGAGTCCCGTCCAAT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAGGACAACTGCAAGTTaGCGTTCTTCTGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDRTTAS*RSSEKK
Trigger: TTTCTTCTCAGAAGAACGCCAACTTGCAGTTGTCCT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAATGCACTTTAAGATCTaGGACTTGCAGGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLMHFKI*DLQASN
Trigger: GTTTGAGGCCTGCAAGTCCCAGATCTTAAAGTGCAT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATTGCGTTTTGCTTAGGTaGAGTTTTACCGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDCVLLR*SFTACL
Trigger: CAAACATGCGGTAAAACTCCACCTAAGCAAAACGCA...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCATTTGCTATTATATGTaGCATAAGGGCAACACTTTC +
Preference number: 4 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIICYYM*HKGNTF
Trigger: GAAAGTGTTGCCCTTATGCCACATATAATAGCAAAT...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACATGTCAACAGTGCCTaGCTGTTAGGAATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLHVNSA*LLGIKV
Trigger: GACTTTGATTCCTAACAGCCAGGCACTGTTGACATG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAACATTCTACAGGCATaGTTGCAGTCATTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCNILQA*LQSFFF
Trigger: AAAGAAAAATGACTGCAACCATGCCTGTAGAATGTT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTACTGATAGTGGTCATTaGGAGTCCCGTAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFTDSGH*ESRKLR
Trigger: TCTAAGTTTACGGGACTCTCAATGACCACTATCAGT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAAATGGACATTACCATaGAAAGTAAGCCTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTKWTLP*KVSLQV
Trigger: CACTTGGAGGCTTACTTTTCATGGTAATGTCCATTT...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACATGTCAGAACTACATTTaGGCCGCTATTCCCTATGCC +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTCQNYI*AAIPYA
Trigger: GGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACA...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAATAGAATTTCCTTGTTaGAGGACGGTGCTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLIEFPC*RTVLSR
Trigger: TCTACTGAGCACCGTCCTTCAACAAGGAAATTCTAT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGGCCAGGCTGTTGTGTaGAGTGTTTGCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTGQAVV*SVCCCY
Trigger: ATAACAACAGCAAACACTTCACACAACAGCCTGGCC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTAGATCAGATTGTTCATaGTTACGAAGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFRSDCS*LRRRTG
Trigger: TCCTGTCCTCCTTCGTAATCATGAACAATCTGATCT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTACTAAGGCATTCGTCCTaGAGAGCTATTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLLRHSS*RAILHP
Trigger: TGGATGAAGAATAGCTCTGCAGGACGAATGCCTTAG...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTACTGGGCAATCCAGGTaGAACTGTAATTGTTACACT +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFTGQSR*NCNCYT
Trigger: AGTGTAACAATTACAGTTGCACCTGGATTGCCCAGT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCGTTCTCTCAGATTCTaGATTTCACCTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFRSLRF*ISPILP
Trigger: TGGGAGAATAGGTGAAATGCAGAATCTGAGAGAACG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGGACACCCTATTTCATaGTTTCTGTTGCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLGHPIS*FLLLLK
Trigger: CTTTAGAAGCAACAGAAAGCATGAAATAGGGTGTCC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGATCATAGACTCTTACTaGCACATTGTCCATAGACCC +
Preference number: 4 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLIIDSY*HIVHRP
Trigger: GGGTCTATGGACAATGTGGCAGTAAGAGTCTATGAT...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR GCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGGTGTTTGCCTTTCTTTaGTGGCAAGTAAACACTTTA +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMVFAFL*WQVNTL
Trigger: TAAAGTGTTTACTTGCCAGCAAAGAAAGGCAAACAC...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAAATCCGACAGGATGTTaGCGTAGACAGCGGTCATTT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTNPTGC*RRQRSF
Trigger: AAATGACCGCTGTCTACGCCAACATCCTGTCGGATT...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTACACTGCAATAAAAGATaGGGTGGCCTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLHCNKR*GGLCPC
Trigger: ACATGGACAAAGGCCACCCCATCTTTTATTGCAGTG...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTACTTCTCTGAAGACTaGCTGAACTTTCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: HILVSEVFESSSIVLRNWYFSED*LNFLYL
Trigger: TAAGTACAGAAAGTTCAGCCAGTCTTCAGAGAAGTA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp ATAATTTTTGGAGAAACACCCACGCCTGTTAGCCCATaGTTCGTAACTATTGGAAGAAGATTAACTAGAGCC +
Preference number: 4 (lower is better)
Translates to: IIFGETPTPVSP*FVTIGRRLTRA
Trigger: GGCTCTAGTTAATCTTCTTCCAATAGTTACGAACAATGGGCTAACAGGCGTGGGTGTTTCTCCAAAAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTAAGTTGGCGTTCTTCTaGGAAGAAAAAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFKLAFF*EEKESA
Trigger: TGCAGATTCTTTTTCTTCTCAGAAGAACGCCAACTT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTATCCTCCCTTAGGTATTaGTATTTGATTGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLSSLRY*YLIVGS
Trigger: AGACCCTACAATCAAATATCAATACCTAAGGGAGGA...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACATTGTGGGTGATTGATTaGTGGATGAGTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTLWVID*WMSADT
Trigger: AGTGTCAGCACTCATCCATCAATCAATCACCCACAA...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTTTGGATGGTTGCAGTaGGATCTGAATTATGTAACT +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTFGWLQ*DLNYVT
Trigger: AGTTACATAATTCAGATCTCACTGCAACCATCCAAA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR GCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCGGTCATTTTATCCATaGAATTGTGTGCTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFRSFYP*NCVLRL
Trigger: CAAACGAAGCACACAATTGCATGGATAAAATGACCG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATATAAACATCAGGTTCTaGAGAAAGGGATTACCAGAA +
Preference number: 4 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDINIRF*RKGLPE
Trigger: TTCTGGTAATCCCTTTCTGCAGAACCTGATGTTTAT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTTTTGTTTTAATCATGTaGACGCTCAAATCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTFVLIM*TLKSWR
Trigger: CCTCCAAGATTTGAGCGTCCACATGATTAAAACAAA...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACACACTGCAATAAAAGATaGGGTGGCCTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTHCNKR*GGLCPC
Trigger: ACATGGACAAAGGCCACCCCATCTTTTATTGCAGTG...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATGCGTTTTGCTTAGGTaGAGTTTTACCGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLCVLLR*SFTACL
Trigger: CAAACATGCGGTAAAACTCCACCTAAGCAAAACGCA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CCA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGAGTTCTCATAGACAGTaGTGTGTGCTTAAAACTATT +
Preference number: 4 (lower is better)
Translates to: TLDWSRQFLTATRTPILMSSHRQ*CVLKTI
Trigger: AATAGTTTTAAGCACACACCACTGTCTATGAGAACT...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAATATGTCTCTCTGTCTaGGGGGATGGAAATTTGTAT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLICLSV*GDGNLY
Trigger: ATACAAATTTCCATCCCCCCAGACAGAGAGACATAT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
3UTR CAA 72 bp TTTTCATTTTTCAATTGGCCAAAGCAGAAGTCGACGTaGACTGAAATGAAGCCATTTGCAAAGCTAATGGTG +
Preference number: 4 (lower is better)
Translates to: FSFFNWPKQKST*TEMKPFAKLMV
Trigger: CACCATTAGCTTTGCAAATGGCTTCATTTCAGTCAACGTCGACTTCTGCTTTGGCCAATTGAAAAATGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACTCATTACTTCAGAATaGCATTCCTGGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLLITSE*HSWNFI
Trigger: AATGAAGTTCCAGGAATGTCATTCTGAAGTAATGAG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR TCA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTTTGGATGGTTGCAGTaGGATCTGAATTATGTAACT +
Preference number: 4 (lower is better)
Translates to: DGKATECKHLVRSVIFGFFGWLQ*DLNYVT
Trigger: AGTTACATAATTCAGATCTCACTGCAACCATCCAAA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR GCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGATTCATGTCAACAGTaGCTGGCTGTTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTDSCQQ*LAVRNQ
Trigger: TTGATTCCTAACAGCCAGGCACTGTTGACATGAATC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACATGTGATGAATCTGTTTaGCCACAGGGTGGTATAATC +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTCDESV*PQGGII
Trigger: GATTATACCACCCTGTGGCCAAACAGATTCATCACA...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR TCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACATTGATGGATGAGTGCTaGCACTTCAATGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTLMDEC*HFNEAI
Trigger: AATAGCTTCATTGAAGTGTCAGCACTCATCCATCAA...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR GCA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAATAATATCAGCACCTTaGTTTTCATGTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLIISAP*FSCQNY
Trigger: GTAGTTCTGACATGAAAAGCAAGGTGCTGATATTAT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CCA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGAGAATAATTCTACATaGATGAGTGTGCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTENNST*MSVQFS
Trigger: GGAAAACTGCACACTCATCCATGTAGAATTATTCTC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS CCA 90 bp GACTGCAGGGCGCTGAGTGGGTTGATGCATGGCAGGGCCGGGGCGTaGTTGGCGAGGGCGCACCCATTGCTCAGAGCAGATGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: DCRALSGLMHGRAGA*LARAHPLLRADVGS
Trigger: GGAGCCCACATCTGCTCTGAGCAATGGGTGCGCCCTCGCCAACCACGCCCCGGCCCTGCCATGCATCAACCCACTCAGCGCCCTGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp TTCTTTCAGCTGTTCCTCCTGGGCGTAGCCTGCCGCCCGCTTGGGTaGCTGCTGTTTTCTCCTCGGCATCCTCTACTTCGCTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: FFQLFLLGVACRPLG*LLFSPRHPLLRSSP
Trigger: GGGACTGGAGCGAAGTAGAGGATGCCGAGGAGAAAACAGCAGGCACCCAAGCGGGCGGCAGGCTACGCCCAGGAGGAACAGCTGAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS GCA 90 bp TTTGCTCTGGGCCCGTTTCTAGCTCCTCGTCCGTCCCTGTGTCATTaGCACCCTGCAGTTGAGCTACTGAACCGCTGTCCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FALGPFLAPRPSLCH*HPAVELLNRCPPPP
Trigger: AGGAGGAGGAGGACAGCGGTTCAGTAGCTCAACTGCAGGGTGGCAATGACACAGGGACGGACGAGGAGCTAGAAACGGGCCCAGAGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp GGGCTGATCGCTGTTCTCAAACAGGTAGCGCCTGGACACGCTGGCTaGCCTTGTGGAGGCAGGACTCAAGACCGGCTTGTCCATGACATT +
Preference number: 5 (lower is better)
Translates to: GLIAVLKQVAPGHAG*PCGGRTQDRLVHDI
Trigger: AATGTCATGGACAAGCCGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAGGCGCTACCTGTTTGAGAACAGCGATCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp TTTGGTGCAATGGGCCTCAGCTTGTTGGTGAGATTAGGCCGGATCTaGAGTACCTGGGATCCCATAGGCAAAGGCGGCTTGGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: FGAMGLSLLVRLGRI*STWDPIGKGGLVPS
Trigger: TGAGGGCACCAAGCCGCCTTTGCCTATGGGATCCCAGGTACTGCAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp CTCCTCGTCCGTCCCTGTGTCATTGCCACCCTGCAGTTGAGCTACTaGACCGCTGTCCTCCTCCTCCTCCTCTTCTTTTATTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLVRPCVIATLQLSY*TAVLLLLLFFYFLL
Trigger: GAGGAGGAAATAAAAGAAGAGGAGGAGGAGGAGGACAGCGGTTCAGTAGCTCAACTGCAGGGTGGCAATGACACAGGGACGGACGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp TGCCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATTGGACAGCTTaGAGCCAAGGCCCAGGCCTGACCAGTAGGAATCCGACAGGATGT +
Preference number: 5 (lower is better)
Translates to: CRFGCHSSSSHYWTA*SQGPGLTSRNPTGC
Trigger: ACATCCTGTCGGATTCCTACTGGTCAGGCCTGGGCCTTGGCTTCAAGCTGTCCAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp GGGAGGACTTTGACCATGTCGGCGATGTCAGACAGAGCGTGCTTCTaGGGTGGGGACATACAAGATTGTGCTTGCGAGGACTCGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GRTLTMSAMSDRACF*GGDIQDCACEDSAF
Trigger: GAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATCGCCGACATGGTCAAAGTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp TTTTATTTCCTCCTCTTCTTTCAGCTGTTCCTCCTGGGCGTAGCCTaGCGCCCGCTTGGGTGCCTGCTGTTTTCTCCTCGGCATCCTCTA +
Preference number: 5 (lower is better)
Translates to: FYFLLFFQLFLLGVA*RPLGCLLFSPRHPL
Trigger: TAGAGGATGCCGAGGAGAAAACAGCAGGCACCCAAGCGGGCGGCAGGCTACGCCCAGGAGGAACAGCTGAAAGAAGAGGAGGAAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAGCATCACTTTCCACTTaGGTGCAATGGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQASLST*VQWASA
Trigger: AGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGC...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS CCA 90 bp GGCCAGGTGTGTGGGCATAGAAACCAGTGGCATCACTTTCCACTTTaGTGCAATGGGCCTCAGCTTGTTGGTGAGATTAGGCCGGATCTG +
Preference number: 5 (lower is better)
Translates to: GQVCGHRNQWHHFPL*CNGPQLVGEIRPDL
Trigger: CAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCCACACACCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAACAGTCCCGCACATCTaGCTGCTCTGTCGGTACAAC +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSATVPHI*LLCRYN
Trigger: GTTGTACCGACAGAGCAGCAAGATGTGCGGGACTGT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS TCA 90 bp CGATACCCGGGAGATCTCTTGCTCCACCTTGCTTTGCTGGTCCACTaGCAAGCGGGTCATGTCCTTCATTTGGAAACCCAGGTGAGATTC +
Preference number: 5 (lower is better)
Translates to: RYPGDLLLHLALLVH*QAGHVLHLETQVRF
Trigger: GAATCTCACCTGGGTTTCCAAATGAAGGACATGACCCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGTATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS TCA 90 bp TTAGAGTCTGTGTCCTCTTCGGCAGCTATTGTTTCTGGAGACCTCTaGGCCGACGATACCCGGGAGATCTCTTGCTCCACCTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LESVSSSAAIVSGDL*ADDTREISCSTLLC
Trigger: GCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGGACACAGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS GCA 90 bp CTGAACAGGCTGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTGCTaGAGGCTTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTC +
Preference number: 5 (lower is better)
Translates to: LNRLGFETDREGKFC*RLLDRASWCQSKSL
Trigger: GAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCAGCCTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp GAGCTGAACAGGCTGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTaGTGCAGGCTTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCA +
Preference number: 5 (lower is better)
Translates to: ELNRLGFETDREGKF*CRLLDRASWCQSKS
Trigger: TGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCAGCCTGTTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp GGCTTGGGAGCCAGAGAATCACTGTTTGGGGCCTCAGACAACGACTaGATTTTCTCCACTGCTAACGGGTCTAATACCAGCTGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GLGARESLFGASDND*IFSTANGSNTSCFP
Trigger: AGGGAAGCAGCTGGTATTAGACCCGTTAGCAGTGGAGAAAATGCAGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTGGCTCCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp CAGGTGTGTGGGCATAGAAACCAGTGGCATCACTTTCCACTTTGGTaGAATGGGCCTCAGCTTGTTGGTGAGATTAGGCCGGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: QVCGHRNQWHHFPLW*NGPQLVGEIRPDLQ
Trigger: CTGCAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCCACACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp CAGCAGAGACTCGTTCTCGGCATCCTGATTGGACAAATGACTTCCTaGAGAGTTCTGGTAGCTGAAGCAGCCTTTTTGCTCTGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: QQRLVLGILIGQMTS*RVLVAEAAFLLWAR
Trigger: ACGGGCCCAGAGCAAAAAGGCTGCTTCAGCTACCAGAACTCTCCAGGAAGTCATTTGTCCAATCAGGATGCCGAGAACGAGTCTCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp GACTTTGACCATGTCGGCGATGTCAGACAGAGCGTGCTTCTGAGGTaGGGACATACAAGATTGTGCTTGCGAGGACTCGGCTTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: DFDHVGDVRQSVLLR*GHTRLCLRGLGFLA
Trigger: AGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATCGCCGACATGGTCAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATGTGGAACATGGAAATaGTGCTTGAACTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQCGTWK*CLNLGW
Trigger: CCAGCCCAAGTTCAAGCACAATTTCCATGTTCCACA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCATCACTCACTGTAGGTTaGTGGCTGCTGTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSASLTVG*WLLSDP
Trigger: GGGATCTGACAGCAGCCACAAACCTACAGTGAGTGA...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS GCA 90 bp CGAGAAGGCAAGTTCTGCTGCAGGCTTTTGGACAGAGCGTCTTGGTaGCAATCAAAATCACTCTTGTTGCTGCCGTTTCGGGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: REGKFCCRLLDRASW*QSKSLLLLPFRVSQ
Trigger: CTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp GATGTCAGACAGAGCGTGCTTCTGAGGTGGGGACATACAAGATTGTaGTTGCGAGGACTCGGCTTTCTTGCTTTTGGACTTGGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: DVRQSVLLRWGHTRL*LRGLGFLAFGLGQV
Trigger: GACCTGACCAAGTCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp GACCGAGAAGGCAAGTTCTGCTGCAGGCTTTTGGACAGAGCGTCTTaGTGCCAATCAAAATCACTCTTGTTGCTGCCGTTTCGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: DREGKFCCRLLDRAS*CQSKSLLLLPFRVS
Trigger: TGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp TGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTGCTGCAGGCTTTTaGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: WVSRRTEKASSAAGF*TERLGANQNHSCCC
Trigger: GCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp CTTGACTTGAGTGTAAGGGGCCAGGTGTGTGGGCATAGAAACCAGTaGCATCACTTTCCACTTTGGTGCAATGGGCCTCAGCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LDLSVRGQVCGHRNQ*HHFPLWCNGPQLVG
Trigger: ACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCCACACACCTGGCCCCTTACACTCAAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATATAGGCAAAGGCGGCTaGGTGCCCTCAGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNIGKGG*VPSDSW
Trigger: CCAGCTGTCTGAGGGCACCAAGCCGCCTTTGCCTAT...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTTGGTGTTCGGGTGACTaGCTGTGCGTTTTGCTTAGG +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFWCSGD*LCVLLR
Trigger: CCTAAGCAAAACGCACAGCAAGTCACCCGAACACCA...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTCAACAGGCAGCCTCCTaGAGAAATGGTGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFQQAAS*RNGEEE
Trigger: CTCTTCCTCACCATTTCTCAAGGAGGCTGCCTGTTG...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTAGTAGAGACGAGGTTTaGCCATGTTGGCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFSRDEV*PCWPGW
Trigger: CCAACCTGGCCAACATGGCAAAACCTCGTCTCTACT...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS CCA 90 bp ACACTTGAATTTAGAGTCTGTGTCCTCTTCGGCAGCTATTGTTTCTaGAGACCTCTGAGCCGACGATACCCGGGAGATCTCTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TLEFRVCVLFGSYCF*RPLSRRYPGDLLLH
Trigger: GTGGAGCAAGAGATCTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGGACACAGACTCTAAATTCAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCACAATCAAAATCACTCTaGTTGCTGCCGTTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAQSKSL*LLPFRV
Trigger: CACCCGAAACGGCAGCAACAAGAGTGATTTTGATTG...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCGCAATGGGCCTCAGCTaGTTGGTGAGATTAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIAMGLS*LVRLGR
Trigger: CCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGC...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGGACTCAAGACCGGCTaGTCCATGACATTGAGATTC +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFGLKTG*SMTLRF
Trigger: GAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCGCTTTGGGGAGGACTTaGACCATGTCGGCGATGTCA +
Preference number: 5 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPALGRT*TMSAMS
Trigger: TGACATCGCCGACATGGTCAAAGTCCTCCCCAAAGC...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTCCAGTGGTTGTTaGTCTTTGGGCAGTGACAAT +
Preference number: 5 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQISSGC*SLGSDN
Trigger: ATTGTCACTGCCCAAAGACAAACAACCACTGGAAAT...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS TCA 90 bp CAGCGGTCATTTTATCCATGCAATTGTGTGCTTCGTTTGGAAGCCTaGCGTGAGTGTGTGCTTTCTTGTCTGAGGCATCTCTGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: QRSFYPCNCVLRLEA*RECVLSCLRHLCRR
Trigger: TCTGCGGCAGAGATGCCTCAGACAAGAAAGCACACACTCACGTCAGGCTTCCAAACGAAGCACACAATTGCATGGATAAAATGACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp GGGACTTTCTTTCCCACACTCCTTCACCGCTTCATCTTTGTCTTCTaGCTCTTTCTTGACTTGAGTGTAAGGGGCCAGGTGTGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GTFFPTLLHRFIFVF*LFLDLSVRGQVCGH
Trigger: ATGCCCACACACCTGGCCCCTTACACTCAAGTCAAGAAAGAGTCAGAAGACAAAGATGAAGCGGTGAAGGAGTGTGGGAAAGAAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp GGCTTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTaGTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATTGGACA +
Preference number: 5 (lower is better)
Translates to: GFWTERLGANQNHSC*CRFGCHSSSSHYWT
Trigger: TGTCCAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 90 bp GCAGGACTCAAGACCGGCTTGTCCATGACATTGAGATTCGACTTGTaGAACATGGAAATTGTGCTTGAACTTGGGCTGGAGCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: AGLKTGLSMTLRFDL*NMEIVLELGLEQEG
Trigger: ACCTTCCTGCTCCAGCCCAAGTTCAAGCACAATTTCCATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCCTCGTGGGTCTGAGCTaGTCCTTTTTGCGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPLVGLS*SFLRLS
Trigger: TGACAACCGCAAAAAGGACAAGCTCAGACCCACGAG...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAGCCCCGTTTTGGGCTTaGTTGATGGCTGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAAPFWA*LMAVVT
Trigger: TGTCACCACAGCCATCAACAAAGCCCAAAACGGGGC...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATTTTGGGGTGGTGGCTTaGGGGAGGACTTTGACCATG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINFGVVA*GRTLTM
Trigger: CATGGTCAAAGTCCTCCCCAAAGCCACCACCCCAAA...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCATACCCGGGAGATCTCTaGCTCCACCTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAYPGDL*LHLALL
Trigger: CAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGTA...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAACTCTTACTGCCACATaGTCCATAGACCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSATLTAT*SIDPGK
Trigger: TTTTCCAGGGTCTATGGACAATGTGGCAGTAAGAGT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS TCA 90 bp GTCATTTTATCCATGCAATTGTGTGCTTCGTTTGGAAGCCTGACGTaGGTGTGTGCTTTCTTGTCTGAGGCATCTCTGCCGCAGACACTC +
Preference number: 5 (lower is better)
Translates to: VILSMQLCASFGSLT*VCAFLSEASLPQTL
Trigger: GAGTGTCTGCGGCAGAGATGCCTCAGACAAGAAAGCACACACTCACGTCAGGCTTCCAAACGAAGCACACAATTGCATGGATAAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp TATCCTGGAAAGCCCTTTTCCTGGGCTTTGAATAGCTCGTGGGTCTaGGCTTGTCCTTTTTGCGGTTGTCATCTTGATAGTGGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: YPGKPFSWALNSSWV*ACPFCGCHLDSGPF
Trigger: AAACGGGCCACTATCAAGATGACAACCGCAAAAAGGACAAGCTCAGACCCACGAGCTATTCAAAGCCCAGGAAAAGGGCTTTCCAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 90 bp AGCATCCTCTTTGTCCATATCCTGGAAAGCCCTTTTCCTGGGCTTTaGATAGCTCGTGGGTCTGAGCTTGTCCTTTTTGCGGTTGTCATC +
Preference number: 5 (lower is better)
Translates to: SILFVHILESPFPGL*IARGSELVLFAVVI
Trigger: GATGACAACCGCAAAAAGGACAAGCTCAGACCCACGAGCTATTCAAAGCCCAGGAAAAGGGCTTTCCAGGATATGGACAAAGAGGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 90 bp TTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTGCTaGCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: FWTERLGANQNHSCC*RFGCHSSSSHYWTA
Trigger: AGCTGTCCAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGGGGAACACGGCCGATaGACATCAAAAACGCGTTTC +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAGEHGR*TSKTRF
Trigger: GAAACGCGTTTTTGATGTCAATCGGCCGTGTTCCCC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCCCAGAGAATCACTGTTaGGGGCCTCAGACAACGACT +
Preference number: 5 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIPENHC*GPQTTT
Trigger: AGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTGG...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTGTCCCCTCCACCCTTaGAGCCATCTTCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIACPLHP*SHLPSL
Trigger: AAGACTTGGAAGATGGCTCAAAGGGTGGAGGGGACA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCCCAGCTCGGTCTTTTaGGCTTCTGGAGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCPSSVF*ASGGVS
Trigger: TGAAACACCTCCAGAAGCCAAAAAGACCGAGCTGGG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAAGGGCGCTGAGTGGGTaGATGCATGGCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTRALSG*MHGRAG
Trigger: CCCGGCCCTGCCATGCATCAACCCACTCAGCGCCCT...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTGAGGACTCGGCTTTCTaGCTTTTGGACTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: CKANGVERHVSAIPYQLGEDSAF*LLDLVR
Trigger: CCTGACCAAGTCCAAAAGCAAGAAAGCCGAGTCCTC...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGATTTGCATACGCTCTaGTGGGCCCAGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNDLHTL*WAQIRQ
Trigger: CTGTCTGATCTGGGCCCACAAGAGCGTATGCAAATC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTAGTTTTACCGCATGTTaGCTCACAAATGTCCGACAG +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFSFTAC*LTNVRQ
Trigger: CTGTCGGACATTTGTGAGCAAACATGCGGTAAAACT...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCATTCTTCGGTGGCACTTaGTTTTCTTGTGACAGTGAA +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSAFFGGT*FSCDSE
Trigger: TTCACTGTCACAAGAAAACAAAGTGCCACCGAAGAA...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TCCCTCGGCAGTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAATGCAGACAGACAAACTaGGTTCTTATAGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SLGSDMHGCQAAIHLSYQCRQTN*VLIVSL
Trigger: CAAAGAAACTATAAGAACCAAGTTTGTCTGTCTGCA...TTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCACTGCCGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS CCA 90 bp AACTGTGAATGGTGTTCGGGTGACTTGCTGTGCGTTTTGCTTAGGTaGAGTTTTACCGCATGTTTGCTCACAAATGTCCGACAGCACAAC +
Preference number: 5 (lower is better)
Translates to: NCEWCSGDLLCVLLR*SFTACLLTNVRQHN
Trigger: GTTGTGCTGTCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATTTCCTCCTCTCACTATaGGACAGCTTGAAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINFLLSL*DSLKPR
Trigger: CCTTGGCTTCAAGCTGTCCAATAGTGAGAGGAGGAA...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCAACATTTCAGAACCTTTaGAGCATCCTCTTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSATFQNL*SILFVH
Trigger: ATGGACAAAGAGGATGCTCAAAAGGTTCTGAAATGT...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGTGGACGCTCAAATCTaGGAGGGAATCAAAGGAGTC +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCVDAQI*EGIKGV
Trigger: GACTCCTTTGATTCCCTCCAAGATTTGAGCGTCCAC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTGGAGGTGTTTCACTTTaGCGGAAAGAATCGCCCTCA +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAGGVSL*RKESPS
Trigger: TGAGGGCGATTCTTTCCGCAAAAGTGAAACACCTCC...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGCGAGGGCGCACCCATaGCTCAGAGCAGATGTGGGC +
Preference number: 5 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTARAHP*LRADVG
Trigger: GCCCACATCTGCTCTGAGCAATGGGTGCGCCCTCGC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAAAATTGTGCTTGAACTaGGGCTGGAGCAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: WEFKIRLFMITKEDRMVAKLCLN*GWSRKV
Trigger: CACCTTCCTGCTCCAGCCCAAGTTCAAGCACAATTT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCGGTCATGTCCTTCATTaGGAAACCCAGGTGAGATTC +
Preference number: 5 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPGHVLH*ETQVRF
Trigger: GAATCTCACCTGGGTTTCCAAATGAAGGACATGACC...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATGGACAGGAGCGGGTTTaGGAAAGACAGAAAATCTGG +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNGQERV*ERQKIW
Trigger: CCAGATTTTCTGTCTTTCCAAAACCCGCTCCTGTCC...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCGTTTTCCCTGAAGCTTaGGGCTGCCTTGTGCATGAA +
Preference number: 5 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLIVFPEA*GCLVHE
Trigger: TTCATGCACAAGGCAGCCCAAAGCTTCAGGGAAAAC...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGGTGGCAAGTGGTTGTTTGTCTTaGGGCAGTGACAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: WEFKIRLFMITKEDRMVASGCLS*GSDNAA
Trigger: TGCCGCATTGTCACTGCCCAAAGACAAACAACCACT...TGCCACCATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS GCA 90 bp CTGTTACAAACTGTGAATGGTGTTCGGGTGACTTGCTGTGCGTTTTaGTTAGGTGGAGTTTTACCGCATGTTTGCTCACAAATGTCCGAC +
Preference number: 5 (lower is better)
Translates to: LLQTVNGVRVTCCAF*LGGVLPHVCSQMSD
Trigger: GTCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS GCA 90 bp CTTCATCCACGTCTGTTACAAACTGTGAATGGTGTTCGGGTGACTTaGTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCATGTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LHPRLLQTVNGVRVT*CAFCLGGVLPHVCS
Trigger: TGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACGTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CCA 90 bp GTCCTGCAGAGCTATTCTTCATCCACGTCTGTTACAAACTGTGAATaGTGTTCGGGTGACTTGCTGTGCGTTTTGCTTAGGTGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: VLQSYSSSTSVTNCE*CSGDLLCVLLRWSF
Trigger: AAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACGTGGATGAAGAATAGCTCTGCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATTTTTCGAGGAAATGGTaGGGACTGGCTCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINFSRKW*GLAPSK
Trigger: CTTTGAAGGAGCCAGTCCCAACCATTTCCTCGAAAA...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCAAAAGATCCTGTGGTaGAATCGGGGGAACACGGCC +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLQKILW*NRGNTA
Trigger: GGCCGTGTTCCCCCGATTCAACCACAGGATCTTTTG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGACGACTTTCTCATCCTaGCTGGTTTCCTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRTTFSS*LVSSGL
Trigger: AAGGCCAGAGGAAACCAGCAAGGATGAGAAAGTCGT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATATGGGCCTCAGCTTGTaGGTGAGATTAGGCCGGATC +
Preference number: 5 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDMGLSL*VRLGRI
Trigger: GATCCGGCCTAATCTCACCAACAAGCTGAGGCCCAT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTGGCTTGTCCATGACATaGAGATTCGACTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: CKANGVERHVSAIPYQLGGLSMT*RFDLWN
Trigger: GTTCCACAAGTCGAATCTCAATGTCATGGACAAGCC...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTCGGCTTTCTTGCTTTaGGACTTGGTCAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIASAFLL*DLVRSM
Trigger: CATTGACCTGACCAAGTCCAAAAGCAAGAAAGCCGA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTCATACAAGATTGTGCTaGCGAGGACTCGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCHTRLC*RGLGFL
Trigger: AAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATG...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGTCAGACAGCAGGTATTaGCCCTCTGATGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRSDSRY*PSDVWK
Trigger: CTTCCAGACATCAGAGGGCAAATACCTGCTGTCTGA...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCGTAAACTTAGAGATTaGCATACGCTCTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIARKLRD*HTLLWA
Trigger: GGCCCACAAGAGCGTATGCAAATCTCTAAGTTTACG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTGACTTGCTGTGCGTTTaGCTTAGGTGGAGTTTTACC +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCDLLCV*LRWSFT
Trigger: GGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTC...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCACCCCGTTGTACTGTaGCTATTTTTCCTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAHPVVL*LFFLVG
Trigger: ACCCACAAGGAAAAATAGCAACAGTACAACGGGGTG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGCCAGCCCAGATCTTGTTTTCTAAGGTGAACCTTAGCAGCCATCCCTCGGCATGTATGTCAGCTTTTTaGACTCGCATTACACATTCT +
Preference number: 5 (lower is better)
Translates to: VPAQILFSKVNLSSHPSACMSAF*TRITHS
Trigger: AGAATGTGTAATGCGAGTCAAAAAAGCTGACATACA...TGCCGAGGGATGGCTGCTAAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTTCTGCTGCAGGCTTTaGGACAGAGCGTCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFFCCRL*DRASWC
Trigger: GCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTTTTGCGGTTGTCATCTaGATAGTGGCCCGTTTCATT +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAFAVVI*IVARFI
Trigger: AATGAAACGGGCCACTATCAAGATGACAACCGCAAA...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTGGGGACATACAAGATaGTGCTTGCGAGGACTCGGC +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFWGHTR*CLRGLG
Trigger: GCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTACCCGGGAGATCTCTaGCTCCACCTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFYPGDL*LHLALL
Trigger: CAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGTA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTACAATTTCCATGGAATaGGGAATTGTATTGATCTCC +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFTISME*GIVLIS
Trigger: GGAGATCAATACAATTCCCAATTCCATGGAAATTGT...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CTTACGCTCCCAGCCATCCAAGCTGCATTGTACTCAGGGAAAACAGCCTGGTTTGAAGAATGGCGATACTaGAGGGTAATTTGCATTATA +
Preference number: 5 (lower is better)
Translates to: LTLPAIQAALYSGKTAWFEEWRY*RVICII
Trigger: TATAATGCAAATTACCCTCAAGTATCGCCATTCTTC...AAACCAGGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGCTGGGAGCGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTCAATTTGCAGCTGGTaGGTGGTCTTAGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: HILVSEVFESSSIVLRNWSICSW*VVLAGR
Trigger: CCTTCCAGCTAAGACCACCAACCAGCTGCAAATTGA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGAGGAAGGCCAGGCTGTaGTGTGAAGTGTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: HILVSEVFESSSIVLRNWRKARL*CEVFAV
Trigger: AACAGCAAACACTTCACACAACAGCCTGGCCTTCCT...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGGCAAAGCTAATGGTGTaGAGAGGCATGTCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRAKLMV*RGMSLL
Trigger: TAGCAGAGACATGCCTCTCAACACCATTAGCTTTGC...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTCAGACAGCAGGTATTaGCCCTCTGATGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLSDSRY*PSDVWK
Trigger: CTTCCAGACATCAGAGGGCAAATACCTGCTGTCTGA...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTAAGATGGGGTGGCCTTaGTCCATGTTTTTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCKMGWP*SMFFRN
Trigger: ATTTCTGAAAAACATGGACAAAGGCCACCCCATCTT...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCCTCTTCGGCAGCTATaGTTTCTGGAGACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFPLRQL*FLETSE
Trigger: CTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp GCATGTCTCTGCTATTCCGTATCAGCTAGGTTTCAGGAAGGTGGTTCAATAGCTCAGCACAACTTACACTaGAATTTAGAGTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: ACLCYSVSARFQEGGSIAQHNLH*NLESVS
Trigger: GGACACAGACTCTAAATTCAAGTGTAAGTTGTGCTG...AGCTATTGAACCACCTTCCTGAAACCTAGCTGATACGGAATAGCAGAGACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGGTGCCAGCCCAGATCTaGTTTTCTAAGGTGAACCTT +
Preference number: 5 (lower is better)
Translates to: HILVSEVFESSSIVLRNWVPAQI*FSKVNL
Trigger: AAGGTTCACCTTAGAAAACAAGATCTGGGCTGGCAC...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGAATGGACATCTCAATTaGCAGCTGGTTGGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRNGHLN*QLVGGL
Trigger: AAGACCACCAACCAGCTGCAAATTGAGATGTCCATT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTTGTTGTGTGAAGTGTTaGCTGTTGTTATCCCACAGT +
Preference number: 5 (lower is better)
Translates to: CKANGVERHVSAIPYQLGCCVKC*LLLSHS
Trigger: ACTGTGGGATAACAACAGCAAACACTTCACACAACA...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATATTTTATCCATGCAATaGTGTGCTTCGTTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNILSMQ*CASFGS
Trigger: GCTTCCAAACGAAGCACACAATTGCATGGATAAAAT...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTAGATTTGCATACGCTCTaGTGGGCCCAGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLDLHTL*WAQIRQ
Trigger: CTGTCTGATCTGGGCCCACAAGAGCGTATGCAAATC...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCGTAAACTTAGAGATTaGCATACGCTCTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLRKLRD*HTLLWA
Trigger: GGCCCACAAGAGCGTATGCAAATCTCTAAGTTTACG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGGTCATGTCCTTCATTaGGAAACCCAGGTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLGHVLH*ETQVRF
Trigger: GAATCTCACCTGGGTTTCCAAATGAAGGACATGACC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTGACTTGCTGTGCGTTTaGCTTAGGTGGAGTTTTACC +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLDLLCV*LRWSFT
Trigger: GGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTC...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp TTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGTTATGGTGTTCGGGTGACTaGCTGTGCGTTTTGCTTAGG +
Preference number: 5 (lower is better)
Translates to: FQNIIDSYCHIVHRPKLLWCSGD*LCVLLR
Trigger: CCTAAGCAAAACGCACAGCAAGTCACCCGAACACCA...TAACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATATTTCATGCTTTCTGTaGCTTCTAAAGCTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNISCFL*LLKLSC
Trigger: GCAGCTTAGCTTTAGAAGCAACAGAAAGCATGAAAT...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCTCCATTCATTTCTGGTaGAATAGGTTAAGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPSIHFW*NRLSKD
Trigger: GTCTTTGCTTAACCTATTCAACCAGAAATGAATGGA...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATTTTAATAGAATTTCCTaGTTGAAGGACGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINFNRIS*LKDGAQ
Trigger: CTGAGCACCGTCCTTCAACAAGGAAATTCTATTAAA...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATGTGTATTTGGAGGATTaGCTGAACTACAAAATAGGG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINVYLED*LNYKIG
Trigger: CCCTATTTTGTAGTTCAGCAAATCCTCCAAATACAC...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CAGCACCTTGCTTTTCATGTCAGAACTACATTTGAGCCGCTATTCCCTATGCCCATCTTACTATCCTTGTaGCAGAGAAGAGAGGATAAT +
Preference number: 5 (lower is better)
Translates to: QHLAFHVRTTFEPLFPMPILLSL*QRREDN
Trigger: ATTATCCTCTCTTCTCTGCAACAAGGATAGTAAGAT...GGGCATAGGGAATAGCGGCTCAAATGTAGTTCTGACATGAAAAGCAAGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GTGACATGCACGGTTGCCAGGCGGCAATTCACCTGTCTTACCAAATTTATCAATTCGAAAGCTCAAGTATaGTATTGCGAAACTGGAATG +
Preference number: 5 (lower is better)
Translates to: VTCTVARRQFTCLTKFINSKAQV*YCETGM
Trigger: CATTCCAGTTTCGCAATACAATACTTGAGCTTTCGA...ATTGATAAATTTGGTAAGACAGGTGAATTGCCGCCTGGCAACCGTGCATGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAATATCATTTCCTGTTGTGCCCTGTGCCACCAGTGCCTTGTAACATGCTGTGTTGTGTTTGCCTTTCTTaGCTGGCAAGTAAACACTTT +
Preference number: 5 (lower is better)
Translates to: KYHFLLCPVPPVPCNMLCCVCLS*LASKHF
Trigger: AAAGTGTTTACTTGCCAGCAAAGAAAGGCAAACACA...ACACAGCATGTTACAAGGCACTGGTGGCACAGGGCACAACAGGAAATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGGATTACCAGAAAAGGCTGCTGCAGAACTTTCCACCCTGTAATGATCTCATCTGCAGTCATTTTTCTTaGAAAATGACCGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RDYQKRLLQNFPPCNDLICSHFS*KMTGLL
Trigger: AAGCAGACCGGTCATTTTCAAAGAAAAATGACTGCA...GATGAGATCATTACAGGGTGGAAAGTTCTGCAGCAGCCTTTTCTGGTAATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTCCATTGTGGGCCAGTTaGGTAGGAAACAGAAACAAG +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLPLWAS*VGNRNK
Trigger: CTTGTTTCTGTTTCCTACCAAACTGGCCCACAATGG...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTACAAAAGAATCCCCATaGTGGGCCAGTTTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLTKESP*WASLVG
Trigger: TCCTACCAAACTGGCCCACAATGGGGATTCTTTTGT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGCCTCAATGTCAGCAGTaGGGTTTCCTGATGCAAATT +
Preference number: 5 (lower is better)
Translates to: HILVSEVFESSSIVLRNWPQCQQ*GFLMQI
Trigger: AATTTGCATCAGGAAACCCAACTGCTGACATTGAGG...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS TCA 90 bp CCTCCACCCTTTGAGCCATCTTCCAAGTCTTCCTCCCTTAGGTATTaGTATTTGATTGTAGGGTCTAAAGGTTTTTGTAGAGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: PPPFEPSSKSSSLRY*YLIVGSKGFCRGSS
Trigger: TGAAGATCCTCTACAAAAACCTTTAGACCCTACAATCAAATATCAATACCTAAGGGAGGAAGACTTGGAAGATGGCTCAAAGGGTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTTCAAAATCACTCTTGTaGCTGCCGTTTCGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFSKSLL*LPFRVS
Trigger: TGACACCCGAAACGGCAGCAACAAGAGTGATTTTGA...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGGAATGGCCTGGGGCCCCATTACAACAGCAACCGAATAAATAAGGAGAAGAATTTCTTTTATGCAAAGTaGAGACTTCACTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: RNGLGPHYNSNRINKEKNFFYAK*RLHWRH
Trigger: ATGTCTCCAGTGAAGTCTCAACTTTGCATAAAAGAA...ATTCTTCTCCTTATTTATTCGGTTGCTGTTGTAATGGGGCCCCAGGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACACCTCTTCGGCAGCTATaGTTTCTGGAGACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTPLRQL*FLETSE
Trigger: CTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGG...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACACCCCGTTGTACTGTaGCTATTTTTCCTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLHPVVL*LFFLVG
Trigger: ACCCACAAGGAAAAATAGCAACAGTACAACGGGGTG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGCCTAATAACCCTGGATaGGAGCAGACAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRPNNPG*EQTIFN
Trigger: GTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGG...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CAA 90 bp TGCAAAGCTAATGGTGTTGAGAGGCATGTCTCTGCTATTCCGTATCAGCTAGGTATTCTACAGGCATGGTaGCAGTCATTTTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: CKANGVERHVSAIPYQLGILQAW*QSFFFE
Trigger: TTCAAAGAAAAATGACTGCAACCATGCCTGTAGAAT...ACCTAGCTGATACGGAATAGCAGAGACATGCCTCTCAACACCATTAGCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAGCCATCCAAGCTGCATaGTACTCAGGGAAAACAGCC +
Preference number: 5 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTAIQAA*YSGKTA
Trigger: GGCTGTTTTCCCTGAGTACAATGCAGCTTGGATGGC...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTATTTGGACAGAGCGTCTaGGTGCCAATCAAAATCACT +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLFGQSV*VPIKIT
Trigger: AGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAA...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTAGTTTTACCGCATGTTaGCTCACAAATGTCCGACAG +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFSFTAC*LTNVRQ
Trigger: CTGTCGGACATTTGTGAGCAAACATGCGGTAAAACT...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGTTTAATAGAATTTCCTaGTTGAAGGACGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: TLDWSRQFLTATRTPILMFNRIS*LKDGAQ
Trigger: CTGAGCACCGTCCTTCAACAAGGAAATTCTATTAAA...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGACAATTTCCATGGAATaGGGAATTGTATTGATCTCC +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRTISME*GIVLIS
Trigger: GGAGATCAATACAATTCCCAATTCCATGGAAATTGT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CAA 90 bp CACATTCTAGTGTCTGAGGTGTTCGAAAGCTCAAGTATTGTATTGCGAAACTGGTACATCTTACTATCCTaGTTGCAGAGAAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: HILVSEVFESSSIVLRNWYILLS*LQRRED
Trigger: ATCCTCTCTTCTCTGCAACAAGGATAGTAAGATGTA...CCAGTTTCGCAATACAATACTTGAGCTTTCGAACACCTCAGACACTAGAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAACGCCTGTTAGCCCATaGTTCGTAACTATTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLTPVSP*FVTIGR
Trigger: TCTTCCAATAGTTACGAACAATGGGCTAACAGGCGT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAATGCGGCAAAGCCTTaGGAAATGTCAAATAGTGAC +
Preference number: 5 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDNAAKP*EMSNSD
Trigger: GTCACTATTTGACATTTCCAAAGGCTTTGCCGCATT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp CATCTGAAGACTGTTCCTTTCCAGTCGAGCTCCATTCATTTCTGGTTGAATAGGATTTTCATTTTTCAATaGGCCAAAGCAGAAGTCGAC +
Preference number: 5 (lower is better)
Translates to: HLKTVPFQSSSIHFWLNRIFIFQ*AKAEVD
Trigger: GTCGACTTCTGCTTTGGCCAATTGAAAAATGAAAAT...CCTATTCAACCAGAAATGAATGGAGCTCGACTGGAAAGGAACAGTCTTCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTGACAGATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTACTCTTACTGCCACATaGTCCATAGACCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: SDRWKSNRMQAPCKVCNLTLTAT*SIDPNC
Trigger: ACAATTTGGGTCTATGGACAATGTGGCAGTAAGAGT...AAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATCTGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTATTCACCGCTTCATCTTaGTCTTCTGACTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLFTASS*SSDSFL
Trigger: CAAGAAAGAGTCAGAAGACAAAGATGAAGCGGTGAA...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AAGTTTCAGAACATCATAGACTCTTACTGCCACATTGTCCATAGACCCAAATTGAAGATGGGGTGGCCTTaGTCCATGTTTTTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: KFQNIIDSYCHIVHRPKLKMGWP*SMFFRN
Trigger: ATTTCTGAAAAACATGGACAAAGGCCACCCCATCTT...CAATTTGGGTCTATGGACAATGTGGCAGTAAGAGTCTATGATGTTCTGAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605656.2
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCAGCACAACTTACACTaGAATTTAGAGTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFQHNLH*NLESVS
Trigger: GGACACAGACTCTAAATTCAAGTGTAAGTTGTGCTG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000605656.2
CDS-3UTR CAA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATGACGAGACAGCCCCATaGCAATTTATCAATGAAAAT +
Preference number: 5 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDDETAP*QFINEN
Trigger: ATTTTCATTGATAAATTGCAATGGGGCTGTCTCGTC...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp ACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTAATGTCCATTCATTTCTGGTaGAATAGGTTAAGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: TLDWSRQFLTATRTPILMSIHFW*NRLSKD
Trigger: GTCTTTGCTTAACCTATTCAACCAGAAATGAATGGA...CATTAGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371497.10
ENST00000626626.1
CDS-3UTR CAA 90 bp AATAACCCTGGATTGGAGCAGACAATTTTTAACAGCTACGAGAACCCCAATACTGAGTTCAAGATCAGATaGTTCATGATTACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: NNPGLEQTIFNSYENPNTEFKIR*FMITKE
Trigger: CTCCTTCGTAATCATGAACAATCTGATCTTGAACTC...AGTATTGGGGTTCTCGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTACTTATAGAAACCTTTTaGATGGAAATCAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLLIETF*MEIRGS
Trigger: GGAGCCCCTGATTTCCATCAAAAAGGTTTCTATAAG...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAACATTGAGATTCGACTaGTGGAACATGGAAATTGTG +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLTLRFD*WNMEIV
Trigger: CACAATTTCCATGTTCCACAAGTCGAATCTCAATGT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GATGGAAAAGCAACAGAATGCAAGCACCTTGTAAGGTCTGTAATCTTTGGATTTCCTAATAACCCTGGATaGGAGCAGACAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: DGKATECKHLVRSVIFGFPNNPG*EQTIFN
Trigger: GTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGG...AAATCCAAAGATTACAGACCTTACAAGGTGCTTGCATTCTGTTGCTTTTCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGTTATGTGGGAGTTCAAGATCAGATTGTTCATGATTACGAAGGAGGACAGGATAGCTCAAGTATTGTATaGCGAAACTGGAATGTTTGT +
Preference number: 5 (lower is better)
Translates to: SYVGVQDQIVHDYEGGQDSSSIV*RNWNVC
Trigger: ACAAACATTCCAGTTTCGCAATACAATACTTGAGCT...ATCCTGTCCTCCTTCGTAATCATGAACAATCTGATCTTGAACTCCCACATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp AGAATCCACTTTTGGATGGTTGCAGTGAGATCTGAATTATGTAACTTTGGCCTAAGAAAATTAGTGCGCTaGCACAGAAACATTCTACAG +
Preference number: 5 (lower is better)
Translates to: RIHFWMVAVRSELCNFGLRKLVR*HRNILQ
Trigger: CTGTAGAATGTTTCTGTGCAAGCGCACTAATTTTCT...TAGGCCAAAGTTACATAATTCAGATCTCACTGCAACCATCCAAAAGTGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS-3UTR CAA 90 bp GAATTATGTAACTTTGGCCTAATAACCCTGGATTGGAGCAGACAATTTTTAACAAAGCAGAAGTCGACGTaGACTGAAATGAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: ELCNFGLITLDWSRQFLTKQKST*TEMKPF
Trigger: AAATGGCTTCATTTCAGTCAACGTCGACTTCTGCTT...TGTTAAAAATTGTCTGCTCCAATCCAGGGTTATTAGGCCAAAGTTACATAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS CCA 72 bp CAGGACGGACTGCAGGGCGCTGAGTGGGTTGATGCATaGCAGGGCCGGGGCGTGGTTGGCGAGGGCGCACCC +
Preference number: 6 (lower is better)
Translates to: QDGLQGAEWVDA*QGRGVVGEGAP
Trigger: GGGTGCGCCCTCGCCAACCACGCCCCGGCCCTGCCATGCATCAACCCACTCAGCGCCCTGCAGTCCGTCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp GCGCTGAGTGGGTTGATGCATGGCAGGGCCGGGGCGTaGTTGGCGAGGGCGCACCCATTGCTCAGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: ALSGLMHGRAGA*LARAHPLLRAD
Trigger: ATCTGCTCTGAGCAATGGGTGCGCCCTCGCCAACCACGCCCCGGCCCTGCCATGCATCAACCCACTCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp CTGTTCCTCCTGGGCGTAGCCTGCCGCCCGCTTGGGTaGCTGCTGTTTTCTCCTCGGCATCCTCTACTTCGC +
Preference number: 6 (lower is better)
Translates to: LFLLGVACRPLG*LLFSPRHPLLR
Trigger: GCGAAGTAGAGGATGCCGAGGAGAAAACAGCAGGCACCCAAGCGGGCGGCAGGCTACGCCCAGGAGGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS GCA 72 bp CTCCTCTTCTTTCAGCTGTTCCTCCTGGGCGTAGCCTaGCGCCCGCTTGGGTGCCTGCTGTTTTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: LLFFQLFLLGVA*RPLGCLLFSPR
Trigger: CCGAGGAGAAAACAGCAGGCACCCAAGCGGGCGGCAGGCTACGCCCAGGAGGAACAGCTGAAAGAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371497.10
CDS TCA 72 bp CGCTGCACTGTCGGCATCGGAATCTGCTGGCCCCTGTaGACACAGTCCCGCACATCTTGCTGCTCTGTCGGT +
Preference number: 6 (lower is better)
Translates to: RCTVGIGICWPL*TQSRTSCCSVG
Trigger: ACCGACAGAGCAGCAAGATGTGCGGGACTGTGTTCACAGGGGCCAGCAGATTCCGATGCCGACAGTGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp GCTGTTCTCAAACAGGTAGCGCCTGGACACGCTGGCTaGCCTTGTGGAGGCAGGACTCAAGACCGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: AVLKQVAPGHAG*PCGGRTQDRLV
Trigger: GACAAGCCGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAGGCGCTACCTGTTTGAGAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp GGCCCGTTTCTAGCTCCTCGTCCGTCCCTGTGTCATTaGCACCCTGCAGTTGAGCTACTGAACCGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: GPFLAPRPSLCH*HPAVELLNRCP
Trigger: AGGACAGCGGTTCAGTAGCTCAACTGCAGGGTGGCAATGACACAGGGACGGACGAGGAGCTAGAAACGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp TTGGGCTGGAGCAGGAAGGTGAGCGCAAGGGCTCCGTaGCTTTGCCCAAGTGATTGTTCAGGACGGACTGCA +
Preference number: 6 (lower is better)
Translates to: LGWSRKVSARAP*LCPSDCSGRTA
Trigger: TGCAGTCCGTCCTGAACAATCACTTGGGCAAAGCCACGGAGCCCTTGCGCTCACCTTCCTGCTCCAGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp GATCGCTGTTCTCAAACAGGTAGCGCCTGGACACGCTaGCTGACCTTGTGGAGGCAGGACTCAAGACCGGCT +
Preference number: 6 (lower is better)
Translates to: DRCSQTGSAWTR*LTLWRQDSRPA
Trigger: AGCCGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAGGCGCTACCTGTTTGAGAACAGCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp CCTCTGCCTCCTGGGTCCCAGTTCAAGGAATTCTCCTaGCTCAGCCTCCTGAGGTTTCACCATGTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLPPGSQFKEFS*LSLLRFHHVGQ
Trigger: CTGGCCAACATGGTGAAACCTCAGGAGGCTGAGGCAGGAGAATTCCTTGAACTGGGACCCAGGAGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603338.2
CDS CCA 72 bp CAATGGGCTGATCGCTGTTCTCAAACAGGTAGCGCCTaGACACGCTGGCTGACCTTGTGGAGGCAGGACTCA +
Preference number: 6 (lower is better)
Translates to: QWADRCSQTGSA*TRWLTLWRQDS
Trigger: TGAGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAGGCGCTACCTGTTTGAGAACAGCGATCAGCCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp CTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATaGGACAGCTTGAAGCCAAGGCCCAGGCCTGACCAG +
Preference number: 6 (lower is better)
Translates to: LPFRVSQFLLSL*DSLKPRPRPDQ
Trigger: CTGGTCAGGCCTGGGCCTTGGCTTCAAGCTGTCCAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp GCATCTCTGCCGCAGACACTCTTGATGTCCGACACCTaGTCACTGGCGTCACTCAGCAGAGACTCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: ASLPQTLLMSDT*SLASLSRDSFS
Trigger: CGAGAACGAGTCTCTGCTGAGTGACGCCAGTGATCAGGTGTCGGACATCAAGAGTGTCTGCGGCAGAGATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp GTGTCCTCTTCGGCAGCTATTGTTTCTGGAGACCTCTaGGCCGACGATACCCGGGAGATCTCTTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: VSSSAAIVSGDL*ADDTREISCST
Trigger: GGTGGAGCAAGAGATCTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS GCA 72 bp AGGCTGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTaGTGCAGGCTTTTGGACAGAGCGTCTTGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: RLGFETDREGKF*CRLLDRASWCQ
Trigger: TTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp ATGGGCCTCAGCTTGTTGGTGAGATTAGGCCGGATCTaGAGTACCTGGGATCCCATAGGCAAAGGCGGCTTG +
Preference number: 6 (lower is better)
Translates to: MGLSLLVRLGRI*STWDPIGKGGL
Trigger: CAAGCCGCCTTTGCCTATGGGATCCCAGGTACTGCAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp CATGTCGGCGATGTCAGACAGAGCGTGCTTCTGAGGTaGGGACATACAAGATTGTGCTTGCGAGGACTCGGC +
Preference number: 6 (lower is better)
Translates to: HVGDVRQSVLLR*GHTRLCLRGLG
Trigger: GCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATCGCCGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp AATCTGCTGGCCCCTGTGAACACAGTCCCGCACATCTaGCTGCTCTGTCGGTACAACTGCACCGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: NLLAPVNTVPHI*LLCRYNCTELN
Trigger: GTTCAGCTCGGTGCAGTTGTACCGACAGAGCAGCAAGATGTGCGGGACTGTGTTCACAGGGGCCAGCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp CTGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTGCTaGAGGCTTTTGGACAGAGCGTCTTGGTGCCAATCA +
Preference number: 6 (lower is better)
Translates to: LGFETDREGKFC*RLLDRASWCQS
Trigger: TGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp CGTCCCTGTGTCATTGCCACCCTGCAGTTGAGCTACTaGACCGCTGTCCTCCTCCTCCTCCTCTTCTTTTAT +
Preference number: 6 (lower is better)
Translates to: RPCVIATLQLSY*TAVLLLLLFFY
Trigger: ATAAAAGAAGAGGAGGAGGAGGAGGACAGCGGTTCAGTAGCTCAACTGCAGGGTGGCAATGACACAGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp TTGACCATGTCGGCGATGTCAGACAGAGCGTGCTTCTaGGGTGGGGACATACAAGATTGTGCTTGCGAGGAC +
Preference number: 6 (lower is better)
Translates to: LTMSAMSDRACF*GGDIQDCACED
Trigger: GTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATCGCCGACATGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp TACGCTCTTGTGGGCCCAGATCAGACAGCAGGTATTTaGCCTCTGATGTCTGGAAGAGGCTCGAGGCAAACT +
Preference number: 6 (lower is better)
Translates to: YALVGPDQTAGI*PLMSGRGSRQT
Trigger: AGTTTGCCTCGAGCCTCTTCCAGACATCAGAGGGCAAATACCTGCTGTCTGATCTGGGCCCACAAGAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CCA 72 bp GATACCCGGGAGATCTCTTGCTCCACCTTGCTTTGCTaGTCCACTGACAAGCGGGTCATGTCCTTCATTTGG +
Preference number: 6 (lower is better)
Translates to: DTREISCSTLLC*STDKRVMSFIW
Trigger: CCAAATGAAGGACATGACCCGCTTGTCAGTGGACCAGCAAAGCAAGGTGGAGCAAGAGATCTCCCGGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp GGCATCACTTTCCACTTTGGTGCAATGGGCCTCAGCTaGTTGGTGAGATTAGGCCGGATCTGCAGTACCTGG +
Preference number: 6 (lower is better)
Translates to: GITFHFGAMGLS*LVRLGRICSTW
Trigger: CCAGGTACTGCAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp ATACGCTCTTGTGGGCCCAGATCAGACAGCAGGTATTaGCCCTCTGATGTCTGGAAGAGGCTCGAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: IRSCGPRSDSRY*PSDVWKRLEAN
Trigger: GTTTGCCTCGAGCCTCTTCCAGACATCAGAGGGCAAATACCTGCTGTCTGATCTGGGCCCACAAGAGCGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 90 bp GGACCGAGAAGGCAAGTTCTGCTGCAGGCTTTTGGACAGAGCGTCTaGGTGCCAATCAAAATCACTCTTGTTGCTGCCGTTTCGGGTGTC +
Preference number: 6 (lower is better)
Translates to: GPRRQVLLQAFGQSV*VPIKITLVAAVSGV
Trigger: GACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp AGGGGACCCAGCTCGGTCTTTTTGGCTTCTGGAGGTGTTTCACTTTaGCGGAAAGAATCGCCCTCACTGTGGCTGAAAGATGAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RGPSSVFLASGGVSL*RKESPSLWLKDEAS
Trigger: AGAGGCCTCATCTTTCAGCCACAGTGAGGGCGATTCTTTCCGCAAAAGTGAAACACCTCCAGAAGCCAAAAAGACCGAGCTGGGTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp GGCGATGTCAGACAGAGCGTGCTTCTGAGGTGGGGACATACAAGATaGTGCTTGCGAGGACTCGGCTTTCTTGCTTTTGGACTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: GDVRQSVLLRWGHTR*CLRGLGFLAFGLGQ
Trigger: CTGACCAAGTCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGACATCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp TTTGCGGAAAGAATCGCCCTCACTGTGGCTGAAAGATaGGGCCTCTTCGTGGGGACTTTCTTTCCCACACTC +
Preference number: 6 (lower is better)
Translates to: FAERIALTVAER*GLFVGTFFPTL
Trigger: GAGTGTGGGAAAGAAAGTCCCCACGAAGAGGCCTCATCTTTCAGCCACAGTGAGGGCGATTCTTTCCGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp GGGCATAGAAACCAGTGGCATCACTTTCCACTTTGGTaGAATGGGCCTCAGCTTGTTGGTGAGATTAGGCCG +
Preference number: 6 (lower is better)
Translates to: GHRNQWHHFPLW*NGPQLVGEIRP
Trigger: CGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp TTTAGAGTCTGTGTCCTCTTCGGCAGCTATTGTTTCTaGAGACCTCTGAGCCGACGATACCCGGGAGATCTC +
Preference number: 6 (lower is better)
Translates to: FRVCVLFGSYCF*RPLSRRYPGDL
Trigger: GAGATCTCCCGGGTATCGTCGGCTCAGAGGTCTCCAGAAACAATAGCTGCCGAAGAGGACACAGACTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp GAGACGGACCGAGAAGGCAAGTTCTGCTGCAGGCTTTaGGACAGAGCGTCTTGGTGCCAATCAAAATCACTC +
Preference number: 6 (lower is better)
Translates to: ETDREGKFCCRL*DRASWCQSKSL
Trigger: GAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp CTGGCTGACCTTGTGGAGGCAGGACTCAAGACCGGCTaGTCCATGACATTGAGATTCGACTTGTGGAACATG +
Preference number: 6 (lower is better)
Translates to: LADLVEAGLKTG*SMTLRFDLWNM
Trigger: CATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp CTGGGTTTCGAGACGGACCGAGAAGGCAAGTTCTGCTGCAGGCTTTaGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LGFETDREGKFCCRL*DRASWCQSKSLLLL
Trigger: CAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCTCGAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp CTGATGCTGAGTTACTGGATGGCTTGGGAGCCAGAGAATCACTGTTaGGGGCCTCAGACAACGACTGCATTTTCTCCACTGCTAACGGGT +
Preference number: 6 (lower is better)
Translates to: LMLSYWMAWEPENHC*GPQTTTAFSPLLTG
Trigger: ACCCGTTAGCAGTGGAGAAAATGCAGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTGGCTCCCAAGCCATCCAGTAACTCAGCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp GAAACCAGTGGCATCACTTTCCACTTTGGTGCAATGGGCCTCAGCTaGTTGGTGAGATTAGGCCGGATCTGCAGTACCTGGGATCCCATA +
Preference number: 6 (lower is better)
Translates to: ETSGITFHFGAMGLS*LVRLGRICSTWDPI
Trigger: TATGGGATCCCAGGTACTGCAGATCCGGCCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp CTGGACACGCTGGCTGACCTTGTGGAGGCAGGACTCAAGACCGGCTaGTCCATGACATTGAGATTCGACTTGTGGAACATGGAAATTGTG +
Preference number: 6 (lower is better)
Translates to: LDTLADLVEAGLKTG*SMTLRFDLWNMEIV
Trigger: CACAATTTCCATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCCTGCCTCCACAAGGTCAGCCAGCGTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp TCAGTTGTAGAGGCTGTACAATCTGATGCTGAGTTACTGGATGGCTaGGGAGCCAGAGAATCACTGTTTGGGGCCTCAGACAACGACTGC +
Preference number: 6 (lower is better)
Translates to: SVVEAVQSDAELLDG*GARESLFGASDNDC
Trigger: GCAGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTGGCTCCCAAGCCATCCAGTAACTCAGCATCAGATTGTACAGCCTCTACAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp GTCAGACAGAGCGTGCTTCTGAGGTGGGGACATACAAGATTGTGCTaGCGAGGACTCGGCTTTCTTGCTTTTGGACTTGGTCAGGTCAAT +
Preference number: 6 (lower is better)
Translates to: VRQSVLLRWGHTRLC*RGLGFLAFGLGQVN
Trigger: ATTGACCTGACCAAGTCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp TCCATGCAATTGTGTGCTTCGTTTGGAAGCCTGACGTaGGTGTGTGCTTTCTTGTCTGAGGCATCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: SMQLCASFGSLT*VCAFLSEASLP
Trigger: CGGCAGAGATGCCTCAGACAAGAAAGCACACACTCACGTCAGGCTTCCAAACGAAGCACACAATTGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp ACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTaGTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCAC +
Preference number: 6 (lower is better)
Translates to: TERLGANQNHSC*CRFGCHSSSSH
Trigger: GTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp GCCAGAGAATCACTGTTTGGGGCCTCAGACAACGACTaGATTTTCTCCACTGCTAACGGGTCTAATACCAGC +
Preference number: 6 (lower is better)
Translates to: ARESLFGASDND*IFSTANGSNTS
Trigger: GCTGGTATTAGACCCGTTAGCAGTGGAGAAAATGCAGTCGTTGTCTGAGGCCCCAAACAGTGATTCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp CAGAGCGTGCTTCTGAGGTGGGGACATACAAGATTGTaGTTGCGAGGACTCGGCTTTCTTGCTTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: QSVLLRWGHTRL*LRGLGFLAFGL
Trigger: AAGTCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp AGACGGACCGAGAAGGCAAGTTCTGCTGCAGGCTTTTaGACAGAGCGTCTTGGTGCCAATCAAAATCACTCT +
Preference number: 6 (lower is better)
Translates to: RRTEKASSAAGF*TERLGANQNHS
Trigger: AGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCTTCTCGGTCCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp AGGCTGTACAATCTGATGCTGAGTTACTGGATGGCTTaGGAGCCAGAGAATCACTGTTTGGGGCCTCAGACA +
Preference number: 6 (lower is better)
Translates to: RLYNLMLSYWMA*EPENHCLGPQT
Trigger: TGTCTGAGGCCCCAAACAGTGATTCTCTGGCTCCCAAGCCATCCAGTAACTCAGCATCAGATTGTACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp GACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTaGCTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: DRASWCQSKSLL*LPFRVSQFLLS
Trigger: TGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp TTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTaGTTGCTGCCGTTTCGGGTGTCACAGTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LDRASWCQSKSL*LLPFRVSQFLL
Trigger: GAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp AGCGTGCTTCTGAGGTGGGGACATACAAGATTGTGCTaGCGAGGACTCGGCTTTCTTGCTTTTGGACTTGGT +
Preference number: 6 (lower is better)
Translates to: SVLLRWGHTRLC*RGLGFLAFGLG
Trigger: ACCAAGTCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp AGACAGAGCGTGCTTCTGAGGTGGGGACATACAAGATaGTGCTTGCGAGGACTCGGCTTTCTTGCTTTTGGA +
Preference number: 6 (lower is better)
Translates to: RQSVLLRWGHTR*CLRGLGFLAFG
Trigger: TCCAAAAGCAAGAAAGCCGAGTCCTCGCAAGCACAATCTTGTATGTCCCCACCTCAGAAGCACGCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp AGGCTTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTTGTaGCTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATTGGAC +
Preference number: 6 (lower is better)
Translates to: RLLDRASWCQSKSLL*LPFRVSQFLLSLLD
Trigger: GTCCAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp TGCAGGCTTTTGGACAGAGCGTCTTGGTGCCAATCAAAATCACTCTaGTTGCTGCCGTTTCGGGTGTCACAGTTCCTCCTCTCACTATTG +
Preference number: 6 (lower is better)
Translates to: CRLLDRASWCQSKSL*LLPFRVSQFLLSLL
Trigger: CAATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp GAGGCAGGACTCAAGACCGGCTTGTCCATGACATTGAGATTCGACTaGTGGAACATGGAAATTGTGCTTGAACTTGGGCTGGAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: EAGLKTGLSMTLRFD*WNMEIVLELGLEQE
Trigger: TTCCTGCTCCAGCCCAAGTTCAAGCACAATTTCCATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp TTTCACTTTTGCGGAAAGAATCGCCCTCACTGTGGCTaGAAGATGAGGCCTCTTCGTGGGGACTTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: FHFCGKNRPHCG*KMRPLRGDFLS
Trigger: GGAAAGAAAGTCCCCACGAAGAGGCCTCATCTTTCAGCCACAGTGAGGGCGATTCTTTCCGCAAAAGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS GCA 72 bp GAGCGTCTTGGTGCCAATCAAAATCACTCTTGTTGCTaGCGTTTCGGGTGTCACAGTTCCTCCTCTCACTAT +
Preference number: 6 (lower is better)
Translates to: ERLGANQNHSCC*RFGCHSSSSHY
Trigger: ATAGTGAGAGGAGGAACTGTGACACCCGAAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp GGCAAGTTCTGCTGCAGGCTTTTGGACAGAGCGTCTTaGTGCCAATCAAAATCACTCTTGTTGCTGCCGTTT +
Preference number: 6 (lower is better)
Translates to: GKFCCRLLDRAS*CQSKSLLLLPF
Trigger: AAACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp TGTGGGCATAGAAACCAGTGGCATCACTTTCCACTTTaGTGCAATGGGCCTCAGCTTGTTGGTGAGATTAGG +
Preference number: 6 (lower is better)
Translates to: CGHRNQWHHFPL*CNGPQLVGEIR
Trigger: CCTAATCTCACCAACAAGCTGAGGCCCATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp AGGCAAGTTCTGCTGCAGGCTTTTGGACAGAGCGTCTaGGTGCCAATCAAAATCACTCTTGTTGCTGCCGTT +
Preference number: 6 (lower is better)
Translates to: RQVLLQAFGQSV*VPIKITLVAAV
Trigger: AACGGCAGCAACAAGAGTGATTTTGATTGGCACCAAGACGCTCTGTCCAAAAGCCTGCAGCAGAACTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS TCA 72 bp TTTGTCCATATCCTGGAAAGCCCTTTTCCTGGGCTTTaGATAGCTCGTGGGTCTGAGCTTGTCCTTTTTGCG +
Preference number: 6 (lower is better)
Translates to: FVHILESPFPGL*IARGSELVLFA
Trigger: CGCAAAAAGGACAAGCTCAGACCCACGAGCTATTCAAAGCCCAGGAAAAGGGCTTTCCAGGATATGGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp TGGTGTTCGGGTGACTTGCTGTGCGTTTTGCTTAGGTaGAGTTTTACCGCATGTTTGCTCACAAATGTCCGA +
Preference number: 6 (lower is better)
Translates to: WCSGDLLCVLLR*SFTACLLTNVR
Trigger: TCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp AGCTCGGTCTTTTTGGCTTCTGGAGGTGTTTCACTTTaGCGGAAAGAATCGCCCTCACTGTGGCTGAAAGAT +
Preference number: 6 (lower is better)
Translates to: SSVFLASGGVSL*RKESPSLWLKD
Trigger: ATCTTTCAGCCACAGTGAGGGCGATTCTTTCCGCAAAAGTGAAACACCTCCAGAAGCCAAAAAGACCGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp GTGGAGGCAGGACTCAAGACCGGCTTGTCCATGACATaGAGATTCGACTTGTGGAACATGGAAATTGTGCTT +
Preference number: 6 (lower is better)
Translates to: VEAGLKTGLSMT*RFDLWNMEIVL
Trigger: AAGCACAATTTCCATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTTGAGTCCTGCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 90 bp TCTTCATCCACGTCTGTTACAAACTGTGAATGGTGTTCGGGTGACTaGCTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCATGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: SSSTSVTNCEWCSGD*LCVLLRWSFTACLL
Trigger: GAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACGTGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS GCA 72 bp ACTGTGAATGGTGTTCGGGTGACTTGCTGTGCGTTTTaGTTAGGTGGAGTTTTACCGCATGTTTGCTCACAA +
Preference number: 6 (lower is better)
Translates to: TVNGVRVTCCAF*LGGVLPHVCSQ
Trigger: TTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS GCA 72 bp CGTCTGTTACAAACTGTGAATGGTGTTCGGGTGACTTaGTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCAT +
Preference number: 6 (lower is better)
Translates to: RLLQTVNGVRVT*CAFCLGGVLPH
Trigger: ATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CCA 72 bp AAGACCGGCTTGTCCATGACATTGAGATTCGACTTGTaGAACATGGAAATTGTGCTTGAACTTGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: KTGLSMTLRFDL*NMEIVLELGLE
Trigger: CTCCAGCCCAAGTTCAAGCACAATTTCCATGTTCCACAAGTCGAATCTCAATGTCATGGACAAGCCGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CAA 72 bp AACTGTGAATGGTGTTCGGGTGACTTGCTGTGCGTTTaGCTTAGGTGGAGTTTTACCGCATGTTTGCTCACA +
Preference number: 6 (lower is better)
Translates to: NCEWCSGDLLCV*LRWSFTACLLT
Trigger: TGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp ACGTCTGTTACAAACTGTGAATGGTGTTCGGGTGACTaGCTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCA +
Preference number: 6 (lower is better)
Translates to: TSVTNCEWCSGD*LCVLLRWSFTA
Trigger: TGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 90 bp TCTGTTACAAACTGTGAATGGTGTTCGGGTGACTTGCTGTGCGTTTaGCTTAGGTGGAGTTTTACCGCATGTTTGCTCACAAATGTCCGA +
Preference number: 6 (lower is better)
Translates to: SVTNCEWCSGDLLCV*LRWSFTACLLTNVR
Trigger: TCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS TCA 72 bp TTTTATCCATGCAATTGTGTGCTTCGTTTGGAAGCCTaGCGTGAGTGTGTGCTTTCTTGTCTGAGGCATCTC +
Preference number: 6 (lower is better)
Translates to: FYPCNCVLRLEA*RECVLSCLRHL
Trigger: GAGATGCCTCAGACAAGAAAGCACACACTCACGTCAGGCTTCCAAACGAAGCACACAATTGCATGGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
CDS CCA 72 bp AGCTATTCTTCATCCACGTCTGTTACAAACTGTGAATaGTGTTCGGGTGACTTGCTGTGCGTTTTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: SYSSSTSVTNCE*CSGDLLCVLLR
Trigger: CCTAAGCAAAACGCACAGCAAGTCACCCGAACACCATTCACAGTTTGTAACAGACGTGGATGAAGAATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp CTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCATGTTaGCTCACAAATGTCCGACAGCACAACTTACACTTG +
Preference number: 6 (lower is better)
Translates to: LCVLLRWSFTAC*LTNVRQHNLHL
Trigger: CAAGTGTAAGTTGTGCTGTCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 90 bp GGTGACTTGCTGTGCGTTTTGCTTAGGTGGAGTTTTACCGCATGTTaGCTCACAAATGTCCGACAGCACAACTTACACTTGAATTTAGAG +
Preference number: 6 (lower is better)
Translates to: GDLLCVLLRWSFTAC*LTNVRQHNLHLNLE
Trigger: CTCTAAATTCAAGTGTAAGTTGTGCTGTCGGACATTTGTGAGCAAACATGCGGTAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 90 bp TTTACCGCATGTTTGCTCACAAATGTCCGACAGCACAACTTACACTaGAATTTAGAGTCTGTGTCCTCTTCGGCAGCTATTGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: FTACLLTNVRQHNLH*NLESVSSSAAIVSG
Trigger: TCCAGAAACAATAGCTGCCGAAGAGGACACAGACTCTAAATTCAAGTGTAAGTTGTGCTGTCGGACATTTGTGAGCAAACATGCGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2
CDS CAA 72 bp TGTTTGCTCACAAATGTCCGACAGCACAACTTACACTaGAATTTAGAGTCTGTGTCCTCTTCGGCAGCTATT +
Preference number: 6 (lower is better)
Translates to: CLLTNVRQHNLH*NLESVSSSAAI
Trigger: AATAGCTGCCGAAGAGGACACAGACTCTAAATTCAAGTGTAAGTTGTGCTGTCGGACATTTGTGAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329613.7
ENST00000371497.10
ENST00000603338.2
ENST00000605656.2