RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSFM (Homo sapiens)

Ensembl gene IDs: ENSG00000123297

Ensembl transcript IDs: ENST00000323833.12, ENST00000417094.5, ENST00000434359.5, ENST00000457189.1, ENST00000497617.1, ENST00000540550.6, ENST00000543727.5, ENST00000548851.5, ENST00000550559.5, ENST00000651066.1, ENST00000651899.1, ENST00000652027.2

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATGGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATCGTCCAGGGAGCCAACAGAGAGGGG +
Preference number: 1 (lower is better)
Translates to: NGGIQQIRLGQHLSL*LSPRLIVQGANREG
Trigger: CCCCTCTCTGTTGGCTCCCTGGACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CCA 90 bp CCTTCCTGCAACAGCCCAATCAGGCCTTCTTTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: PSCNSPIRPSLVFLP*SLAALLQPSFWASL
Trigger: CAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 90 bp GTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAGATCTCTGCCACTGTGTTACAACTG +
Preference number: 1 (lower is better)
Translates to: VFLPWSLAALLQPSF*ASLWSQISATVLQL
Trigger: CAGTTGTAACACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCGTCC +
Preference number: 1 (lower is better)
Translates to: CTYCPKVMEGSSKYG*DSILVSASPPGSSS
Trigger: GGACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CCA 90 bp TGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCACTGTGTTACAACTGCCTACAGTATTC +
Preference number: 1 (lower is better)
Translates to: WSLAALLQPSFWASL*SQISATVLQLPTVF
Trigger: GAATACTGTAGGCAGTTGTAACACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR TCA 90 bp CCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTaGGGCTGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAA +
Preference number: 1 (lower is better)
Translates to: PSPHSNRTKSTTDTP*GCTYCPKVMEGSSK
Trigger: TTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CCA 90 bp ATACAGTTGTGTTTCCTTCCTGCAACAGCCCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: IQLCFLPATAQSGLL*SSSLGAWQLCSSPP
Trigger: AGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAACTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 90 bp ACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATaGCACCTTCACCCATGCAGCTCGTTTAAGAATCATGTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: TLHCSVDIRANVEPR*HLHPCSSFKNHVFS
Trigger: GGAGAAAACATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR TCA 90 bp CCTATTAAGAGACGCATGACCGTACAGGCAAAAACTACACAACTCTaGAAGATTAAGATGTCTAAAGTCAGCCGGGCGCGGTGGCTCACT +
Preference number: 1 (lower is better)
Translates to: PIKRRMTVQAKTTQL*KIKMSKVSRARWLT
Trigger: AGTGAGCCACCGCGCCCGGCTGACTTTAGACATCTTAATCTTTCAGAGTTGTGTAGTTTTTGCCTGTACGGTCATGCGTCTCTTAATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR GCA 90 bp TCTGTCTCACAGTTTACCTCTACTAATACAGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCTTCTTTGGTCTTCCTCCCTTGGAGC +
Preference number: 1 (lower is better)
Translates to: SVSQFTSTNTVVFPS*NSPIRPSLVFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGGTAAACTGTGAGACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR GCA 90 bp CAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATTaGTCAGCCTTGCAAAGACCGAGCCATGATGGGATGCTCCTGAAC +
Preference number: 1 (lower is better)
Translates to: QMCYQYLTWKIYSNH*SALQRPSHDGMLLN
Trigger: GTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR CCA 90 bp TACTGTATGCAGAGGGTTGATCCTTTAGGGTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCTGGACCAACAGTTGAAATTTTAAAT +
Preference number: 1 (lower is better)
Translates to: YCMQRVDPLGSDNAS*FQGLLAGPTVEILN
Trigger: ATTTAAAATTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGACCCTAAAGGATCAACCCTCTGCATACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR GCA 90 bp AGTTTAGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTaGTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGATTC +
Preference number: 1 (lower is better)
Translates to: SLVKKSYILKVLFLR*LEQSRGGVLQEVGF
Trigger: GAATCCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACTAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
3UTR-3UTR GCA 90 bp GCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 2 (lower is better)
Translates to: AHHMLPKAAANVFKVCFLMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...CAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp CAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCGTCGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 2 (lower is better)
Translates to: QIRLGQHLSLCLSPRLIVAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...GACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp GGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCCAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 2 (lower is better)
Translates to: GGIQQIRLGQHLSLCLSPQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...GGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 90 bp TCCTTCCTGCAACAGCCCAATCAGGCCTTCTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: SFLQQPNQAFFGLPP*ELGSFAPALLLGLL
Trigger: AAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR TCA 90 bp GCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAAACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 2 (lower is better)
Translates to: APACEVRDSALLRGHKSQTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...TTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 90 bp CCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCCACTGTGTTACAACTGCCTACAGTA +
Preference number: 2 (lower is better)
Translates to: PWSLAALLQPSFWAS*WSQISATVLQLPTV
Trigger: TACTGTAGGCAGTTGTAACACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR TCA 90 bp CACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 2 (lower is better)
Translates to: HPLRLHILPQGNGGIQQIQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...TATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 90 bp CCCCATACTTCCCCAGCACCAGCTTGTGAAGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCACCT +
Preference number: 2 (lower is better)
Translates to: PHTSPAPACEVRDSA*LRGHKSQRRTQMAP
Trigger: AGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGGGAAGTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp GCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 2 (lower is better)
Translates to: AAQGGGQRLQGLFSVQTSPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCACTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RKPQYPPTHTSSKREIGALQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR GCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 2 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp CCATGCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 2 (lower is better)
Translates to: PCPPHAAQGGGQRLQGLFSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...AAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp CAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCAAATCTGCCTTACAGCTaGCCAGGAAACCTCAGTACC +
Preference number: 2 (lower is better)
Translates to: QTAQSLLPTPPEAAHTAPNLPYS*PGNLST
Trigger: GGTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATT...TGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp GCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTTCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: AAQGGGQRLQGLFSVQTSSVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CAA 90 bp AATACAGTTGTGTTTCCTTCCTGCAACAGCCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: NTVVFPSCNSPIRPS*VFLPWSLAALLQPS
Trigger: GGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAACTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR TCA 90 bp ACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCACCTTCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 2 (lower is better)
Translates to: TLHCSVDIRANVEPRWHLPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...AAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp GCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGTTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: ARKPQYPPTHTSSKREIGFWASL*SQISAT
Trigger: AGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAA...CCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CCA 90 bp CACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: HILPQGNGGIQQIRLGQHNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...ATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp CCATGCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 2 (lower is better)
Translates to: PCPPHAAQGGGQRLQGLFSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...AAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCACCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 2 (lower is better)
Translates to: RKPQYPPTHTSSKREIGAPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp CCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: PLHLLHIQTAQSLLPTPPNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...AGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCTCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 2 (lower is better)
Translates to: CTYCPKVMEGSSKYGWDSSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...GCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp AATCCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: NPCGTSNITREVPRQKHGSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...ACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR TCA 90 bp ATTCCTCCTGGGCCAAAAGTCTCTGGAACCTATTCAGTTTCTGCTGCCTCTTCACACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 2 (lower is better)
Translates to: IPPGPKVSGTYSVSAASSHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...TGAAGAGGCAGCAGAAACTGAATAGGTTCCAGAGACTTTTGGCCCAGGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp TCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 2 (lower is better)
Translates to: SEAEARFTVSQSKNRTKEQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...CTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp CTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACAAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: LLPLHLLHIQTAQSLLPTNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...TGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp CACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 2 (lower is better)
Translates to: HHMLPKAAANVFKVCFLFHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...GAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 2 (lower is better)
Translates to: CTYCPKVMEGSSKYGWDSHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...GCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR TCA 90 bp AGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 2 (lower is better)
Translates to: SFCCLFTFSTFKPHKVYYHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...GTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp GCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 2 (lower is better)
Translates to: APACEVRDSALLRGHKSQLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...TTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATAAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: STFKPHKVYYRHPLRLHINLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 2 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR GCA 90 bp CCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTTCACTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 2 (lower is better)
Translates to: PCGTSNITREVPRQKHGSLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...TGAACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp ATGCAGAGGGTTGATCCTTTAGGGTCTGACAATGCATCATGGTTCCAAGGGCTATCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 2 (lower is better)
Translates to: MQRVDPLGSDNASWFQGLSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...TAGCCCTTGGAACCATGATGCATTGTCAGACCCTAAAGGATCAACCCTCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CCA 90 bp TTAAATGAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: LNEARTSVSTTAEHLQSIQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...TATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR GCA 90 bp AAATCTATGTTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: KSMLKGAAVLLMPVLHDTVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...AGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAACATAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CAA 90 bp TATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTaGCAAAGACCGAGCCATGATGGGATGCTCCTGAACAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: YQYLTWKIYSNHCSA*QRPSHDGMLLNRMA
Trigger: GGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR-3UTR CCA 90 bp GCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 2 (lower is better)
Translates to: ARKPQYPPTHTSSKREIGRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...CCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR TCA 90 bp CCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGACAATCACAACATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 2 (lower is better)
Translates to: PVCLPLQSTFKAYYRQSQHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...TTGTGATTGTCTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR GCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGCTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 2 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR-3UTR CCA 90 bp TCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 2 (lower is better)
Translates to: SAASSPSPHSNRTKSTTDRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...GTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 90 bp GATGCCTGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGTaGTTTTTGAAAGGCACAGAAAAGCTAAATCCAGTATTACGCAAA +
Preference number: 2 (lower is better)
Translates to: DACSPRHYHVNKAHL*FLKGTEKLNPVLRK
Trigger: TTTGCGTAATACTGGATTTAGCTTTTCTGTGCCTTTCAAAAACAACAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR CAA 90 bp CAGAAATACCATAATAAATCTATGTTGAAGGGAGCAGCAGTATTGTaGATGCCTGTTCTCCACGACACTATCACGTCAATAAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: QKYHNKSMLKGAAVL*MPVLHDTITSIRPT
Trigger: GGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAACATAGATTTATTATGGTATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR GCA 90 bp AGAGTTTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACATCATTGCTCAGCCTTaGAAAGACCGAGCCATGATG +
Preference number: 2 (lower is better)
Translates to: RVFRVVKGTSSNVLSISHIIAQP*KDRAMM
Trigger: CATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGAT...GTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR-3UTR CCA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 2 (lower is better)
Translates to: SGTRMSKSALQLARKPQYRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR CCA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCACGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 2 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR CAA 90 bp TTTCAGAAATACCATAATAAATCTATGTTGAAGGGAGCAGCAGTATaGTTGATGCCTGTTCTCCACGACACTATCACGTCAATAAGGCCC +
Preference number: 2 (lower is better)
Translates to: FQKYHNKSMLKGAAV*LMPVLHDTITSIRP
Trigger: GGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAACATAGATTTATTATGGTATTTCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR GCA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAACAGTGTGTCTACCACTaGAGAGCACCTTCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQQCVYH*RAPSKH
Trigger: ATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR GCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTCAGTGTGTCTACCACTaGAGAGCACCTTCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLQCVYH*RAPSKH
Trigger: ATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR GCA 90 bp ATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAAAGCATTAAGAATGTCAAAATCTaGCTTACAGCTGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: MHSIGKIQIPRSVMCQSIKNVKI*LTAGQE
Trigger: TTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTT...AATGCTTTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR CCA 72 bp CCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAGATCTCTGCCACTGTG +
Preference number: 3 (lower is better)
Translates to: PWSLAALLQPSF*ASLWSQISATV
Trigger: CACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp GCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 3 (lower is better)
Translates to: AHHMLPKAAANVFKVCFLSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...CAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR GCA 72 bp ATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATCGTCCAGGGAGCCAAC +
Preference number: 3 (lower is better)
Translates to: IQQIRLGQHLSL*LSPRLIVQGAN
Trigger: GTTGGCTCCCTGGACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CCA 72 bp TGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGC +
Preference number: 3 (lower is better)
Translates to: CPKVMEGSSKYG*DSILVSASPPG
Trigger: GCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CCA 72 bp GCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCACTGTGTTACAACTGCCT +
Preference number: 3 (lower is better)
Translates to: AALLQPSFWASL*SQISATVLQLP
Trigger: AGGCAGTTGTAACACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 72 bp CAATCAGGCCTTCTTTGGTCTTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: QSGLLWSSSLGA*QLCSSPPSGPP
Trigger: AGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp TCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCACCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: SSKYGWDSILVSASPPGSPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...TGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp CAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCGTCTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 3 (lower is better)
Translates to: QIRLGQHLSLCLSPRLIVFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...GACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR GCA 72 bp GCCCTCCTTCTGGGCCTCCTTGTGGAGCCAGATCTCTaGCACTGTGTTACAACTGCCTACAGTATTCAGTCC +
Preference number: 3 (lower is better)
Translates to: ALLLGLLVEPDL*HCVTTAYSIQS
Trigger: GGACTGAATACTGTAGGCAGTTGTAACACAGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 72 bp TGTTTCCTTCCTGCAACAGCCCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCC +
Preference number: 3 (lower is better)
Translates to: CFLPATAQSGLL*SSSLGAWQLCS
Trigger: GGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp CACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 3 (lower is better)
Translates to: HPLRLHILPQGNGGIQQIQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...TATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR TCA 72 bp TTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATaGTGGGATGCTCCTGAACAGGATGGCCCAGTTCAT +
Preference number: 3 (lower is better)
Translates to: FKSLLSLAKTEP*WDAPEQDGPVH
Trigger: ATGAACTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR CCA 72 bp TTTCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTaGCCAGGAAACCTCAGTACCCACCCACCCACACAT +
Preference number: 3 (lower is better)
Translates to: FLAQECQNLPYS*PGNLSTHPPTH
Trigger: ATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR CCA 72 bp TGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATaGCACCTTCACCCATGCAGCTCGTTTAAGAATCAT +
Preference number: 3 (lower is better)
Translates to: CSVDIRANVEPR*HLHPCSSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CAA 90 bp GTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGACAATCACAAAGAAGGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 3 (lower is better)
Translates to: VSTTAEHLQSILQTITKKVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...CTTCTTTGTGATTGTCTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR TCA 72 bp AGACGCATGACCGTACAGGCAAAAACTACACAACTCTaGAAGATTAAGATGTCTAAAGTCAGCCGGGCGCGG +
Preference number: 3 (lower is better)
Translates to: RRMTVQAKTTQL*KIKMSKVSRAR
Trigger: CCGCGCCCGGCTGACTTTAGACATCTTAATCTTTCAGAGTTGTGTAGTTTTTGCCTGTACGGTCATGCGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 72 bp CAGAGGGTTGATCCTTTAGGGTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCTGGACCAACAGTTGAA +
Preference number: 3 (lower is better)
Translates to: QRVDPLGSDNAS*FQGLLAGPTVE
Trigger: TTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGACCCTAAAGGATCAACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CAA 90 bp AAAGCATACTACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: KAYYRQSQRREPTFSRQLWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...GAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGTAGTATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp GAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: EARTSVSTTAEHLQSILQPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...CTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp CCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 3 (lower is better)
Translates to: PYSPGCSTIYHLGLCRYSVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...AGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCACAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 3 (lower is better)
Translates to: RKPQYPPTHTSSKREIGAQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
3UTR TCA 72 bp ATGTTTTCTCCCAGTTTTCCAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCTCTGTCAGGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: MFSPSFPIAKAN*SLSEPSLSGPA
Trigger: AGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGAAAACTGGGAGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR GCA 72 bp AGAGCCAACGTAGAACCCAGATGGCACCTTCACCCATaGAGCTCGTTTAAGAATCATGTTTTCTCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: RANVEPRWHLHP*SSFKNHVFSQF
Trigger: AAACTGGGAGAAAACATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
3UTR-3UTR CAA 90 bp GGTTCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAAATAAGGCCCACCTGTaGTTTTTGAAAGGCACAGAA +
Preference number: 3 (lower is better)
Translates to: GSEAEARFTVSQSKNRTKNKAHL*FLKGTE
Trigger: TTCTGTGCCTTTCAAAAACAACAGGTGGGCCTTATT...TTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGAACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR-3UTR CAA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGAATAAGGCCCACCTGTaGTTTTTGAAAGGCACAGAA +
Preference number: 3 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMNKAHL*FLKGTE
Trigger: TTCTGTGCCTTTCAAAAACAACAGGTGGGCCTTATT...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR GCA 72 bp AAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTaGTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAA +
Preference number: 3 (lower is better)
Translates to: KKSYILKVLFLR*LEQSRGGVLQE
Trigger: TTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
3UTR GCA 72 bp TATCAATATCTCACCTGGAAGATATATTCAAATCATTaGTCAGCCTTGCAAAGACCGAGCCATGATGGGATG +
Preference number: 3 (lower is better)
Translates to: YQYLTWKIYSNH*SALQRPSHDGM
Trigger: CATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR-3UTR CAA 90 bp TCACAGTTTACCTCTACTAATACAGTTGTGTTTCCTTCCTGCAACAGCCCAATCATATACCATCTAGGTTaGTGTAGGTACTCTATGATG +
Preference number: 3 (lower is better)
Translates to: SQFTSTNTVVFPSCNSPIIYHLG*CRYSMM
Trigger: CATCATAGAGTACCTACACAAACCTAGATGGTATAT...GATTGGGCTGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGGTAAACTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR-3UTR CAA 90 bp CCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATATACCATCTAGGTTaGTGTAGGTACTCTATGATG +
Preference number: 3 (lower is better)
Translates to: PYSPGCSTIYHLGLCRYSIYHLG*CRYSMM
Trigger: CATCATAGAGTACCTACACAAACCTAGATGGTATAT...AGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
3UTR TCA 72 bp CATTTCTCAGAATGTATCTTCCTATTAAGAGACGCATaGCCGTACAGGCAAAAACTACACAACTCTGAAAGA +
Preference number: 3 (lower is better)
Translates to: HFSECIFLLRDA*PYRQKLHNSER
Trigger: TCTTTCAGAGTTGTGTAGTTTTTGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651066.1
3UTR CCA 72 bp AAGGCACATCCTCAAATGTGCTATCAATATCTCACCTaGAAGATATATTCAAATCATTGCTCAGCCTTGCAA +
Preference number: 3 (lower is better)
Translates to: KAHPQMCYQYLT*KIYSNHCSALQ
Trigger: TTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
3UTR CCA 72 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTAATGATGTCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: IILPMHSRSEEV*EIFLFVMMSRA
Trigger: AGCTCTGGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GGIQQIRLGQHLSLCLSPAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...GGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp CAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCGTCACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: QIRLGQHLSLCLSPRLIVTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...GACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp TCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCAACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSKYGWDSILVSASPPGSTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...TGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp CTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCACCTTCACGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LHCSVDIRANVEPRWHLHAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...GTGAAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp GCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTCACTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AQGGGQRLQGLFSVQTSHSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...GTGAGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp CACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 4 (lower is better)
Translates to: HILPQGNGGIQQIRLGQHMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...ATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATAGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: STFKPHKVYYRHPLRLHIAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp TGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCGGAGCTTGGCAGCTTTaGTCCAGCCCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CCPRRRPTSSRFVFCSDVGAWQL*SSPPSG
Trigger: CCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCC...GACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp CTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCACCTTCACCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHCSVDIRANVEPRWHLHLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...GTGAAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp TCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSKYGWDSILVSASPPGSSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...TGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp CCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTTCAATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 4 (lower is better)
Translates to: PCGTSNITREVPRQKHGSMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...TGAACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp TCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SEAEARFTVSQSKNRTKEAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...CTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp AGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCTTGTGAAGCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: RRLTDDQGPILPQHQLVKQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...CTTCACAAGCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp GCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAQGGGQRLQGLFSVQTSSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp TCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SAASSPSPHSNRTKSTTDSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...GTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCATCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKPQYPPTHTSSKREIGASAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: CCPRRRPTSSRFVFCSDVPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...GACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 4 (lower is better)
Translates to: SGTRMSKSALQLARKPQYMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp CACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HHMLPKAAANVFKVCFLFQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...GAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 72 bp TCCCCAGCACCAGCTTGTGAAGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGCCAACGTAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SPAPACEVRDSA*LRGHKSQRRTQ
Trigger: CTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp GGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCCACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: GNGGIQQIRLGQHLSLCLHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...GAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp ACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCACCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: TTCCPRRRPTSSRFVFCSPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...TGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGTRMSKSALQLARKPQYTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGAAGACTCCGTCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: EVRDSALLRGHKSQRRTQKTPSV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGACGGAGTCTT...CTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR GCA 90 bp AGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 4 (lower is better)
Translates to: SFCCLFTFSTFKPHKVYYMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...GTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp CATACTTCCCCAGCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGATTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: HTSPAPACEVRDSALLRGLVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...TCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGGGAAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
3UTR CAA 72 bp GTGTTTCCTTCCTGCAACAGCCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VFPSCNSPIRPS*VFLPWSLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGGGCTGTTGCAGGAAGGAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR TCA 90 bp ACGCCATTTCTCAGAATGTATCTTCCTATTAAGAGACGCATGACCGTACAGGCACTTGGCTGGGGCGACTaGCGCAGAAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPFLRMYLPIKRRMTVQALGWGD*RRRDPA
Trigger: GGCTGGGTCTCTTCTGCGTCAGTCGCCCCAGCCAAG...TGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAGAAATGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR TCA 90 bp CAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGACAATCACAAACTTGGCTGGGGCGACTaGCGCAGAAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: QCVYHCRAPSKHTTDNHKLGWGD*RRRDPA
Trigger: GGCTGGGTCTCTTCTGCGTCAGTCGCCCCAGCCAAG...TTTGTGATTGTCTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TCAGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SVSAASSPSPHSNRTKSTSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...AGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATAAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: STFKPHKVYYRHPLRLHIRSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651899.1
CDS-3UTR GCA 90 bp TCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGGGAGCTTGGCAGCTTTaGTCCAGCCCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEAEARFTVSQSKNRTKEGAWQL*SSPPSG
Trigger: CCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCC...CTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GGCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: GQETSVPTHPHIIQKRNRQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...CCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp GCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTCACCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AQGGGQRLQGLFSVQTSHQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...GTGAGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp GCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: AHHMLPKAAANVFKVCFLSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...CAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp AGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCATCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RDSALLRGHKSQRRTQMASVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...TGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR CCA 90 bp CACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: HKVYYRHPLRLHILPQGNNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...ATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp TTCTGTTCAGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCTCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FCSDVSQMTRAPYFPSTSSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...GCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTGAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCAAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: RKPQYPPTHTSSKREIGARSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000652027.2
CDS-3UTR TCA 90 bp CTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACACACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPLHLLHIQTAQSLLPTHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...TGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp GCCCACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: AHHMLPKAAANVFKVCFLHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...CAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp GGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: GGIQQIRLGQHLSLCLSPHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...GGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp CAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCACTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: QTAQSLLPTPPEAAHTAPLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...TGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp GACATAAGAGCCAACGTAGAACCCAGATGGCACCTTCACCCATGCAGCTCGTTTATAAAATGTGTGCCTTaGCTGGGGCGACTGACGCAG +
Preference number: 4 (lower is better)
Translates to: DIRANVEPRWHLHPCSSFIKCVP*LGRLTQ
Trigger: CTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTAT...AAACGAGCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp CACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HKVYYRHPLRLHILPQGNQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...ATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp AGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCTTGTGAAGTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: RRLTDDQGPILPQHQLVKSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...CTTCACAAGCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp GCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGTCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ARKPQYPPTHTSSKREIGSVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...CCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAAATCTGCCTTACAGCTaGCCAGGAAACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: TTCCPRRRPTSSRFVFCSNLPYS*PGNLST
Trigger: GGTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATT...TGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR TCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ATTCCTCCTGGGCCAAAAGTCTCTGGAACCTATTCAGTTTCTGCTGCCTCTTCAAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: IPPGPKVSGTYSVSAASSRSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...TGAAGAGGCAGCAGAAACTGAATAGGTTCCAGAGACTTTTGGCCCAGGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651899.1
CDS-3UTR TCA 90 bp GGTTCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAACAACTGATCCTTGAGTaGGCCTTCTCTGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSEAEARFTVSQSKNRTKQLILE*AFSVRP
Trigger: GGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTG...TTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GGCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GQETSVPTHPHIIQKRNRKPTDP*VSLLCQ
Trigger: CTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTT...CCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EARTSVSTTAEHLQSILQKPTDP*VSLLCQ
Trigger: CTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTT...CTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp AAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KVMEGSSKYGWDSILVSAVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...GGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGATGCCCACCACATGCTaGCCAAGGCGGCGGCCAACG +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMMPTTC*PRRRPT
Trigger: CGTTGGCCGCCGCCTTGGGCAGCATGTGGTGGGCAT...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: SGTRMSKSALQLARKPQYQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGACTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FQGSERHILKCAINISPGLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...TCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp GCCTGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGTTGTTTTTGAAATCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ACSPRHYHVNKAHLLFLKSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...TTTCAAAAACAACAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTCACAGATGAATCTGCCTTACAGCTaGCCAGGAAACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: RRRPTSSRFVFCSDVSQMNLPYS*PGNLST
Trigger: GGTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATT...CATCTGTGAGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR TCA 90 bp TCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCCTTGGCTGGGGCGACTaGCGCAGAAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SISHLEDIFKSLLSLAKTLGWGD*RRRDPA
Trigger: GGCTGGGTCTCTTCTGCGTCAGTCGCCCCAGCCAAG...GGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp AGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATGATGTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGCSTIYHLGLCRYSMMSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...CATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR TCA 90 bp TCAGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTCACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVSAASSPSPHSNRTKSTHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...AGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp TTAAATGAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNEARTSVSTTAEHLQSIHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...TATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTCATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGACTACCGACACCCCCTaGGGCTGCACATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMTTDTP*GCTYCP
Trigger: GGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGT...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGGGAGCTTGGCAGCTTTaGTCCAGCCCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWGAWQL*SSPPSG
Trigger: CCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCC...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTGGAGCTTGGCAGCTTTaGTCCAGCCCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GVIFKVLRAVKRRCSARSGAWQL*SSPPSG
Trigger: CCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCC...ACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR GCA 90 bp CACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATTGGCACCTTCACCCATaGAGCTCGTTTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: HILPQGNGGIQQIRLGQHWHLHP*SSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCA...ATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp AGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCATGGCACCTTCACCCATaGAGCTCGTTTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: RDSALLRGHKSQRRTQMAWHLHP*SSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCA...TGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp ACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCATGGCACCTTCACCCATaGAGCTCGTTTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: TTCCPRRRPTSSRFVFCSWHLHP*SSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCA...TGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACAGTGTGTCTACCACTaGAGAGCACCTTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: STFKPHKVYYRHPLRLHIQCVYH*RAPSKH
Trigger: ATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR GCA 90 bp GCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCTCACAAGAATGTCAAAATCTaGCTTACAGCTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AQGGGQRLQGLFSVQTSHKNVKI*LTAGQE
Trigger: TTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTT...GTGAGACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR CCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp CCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PYSPGCSTIYHLGLCRYSLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...AGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR CCA 90 bp CCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGRYIQIIAQPCKDRAMMSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...CATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp AGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATGATGCATTGCACGCCGGCCTaGGCCACAGAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: SPGCSTIYHLGLCRYSMMHCTPA*ATEQDS
Trigger: GGAGTCTTGCTCTGTGGCCCAGGCCGGCGTGCAATG...CATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CCA 90 bp CTCAGAATGTATCTTCCTATTAAGAGACGCATGACCGTACAGGCAAAAACTACACATTGCACGCCGGCCTaGGCCACAGAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: LRMYLPIKRRMTVQAKTTHCTPA*ATEQDS
Trigger: GGAGTCTTGCTCTGTGGCCCAGGCCGGCGTGCAATG...TGTAGTTTTTGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR TCA 90 bp ACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCTTGGCTGGGGCGACTaGCGCAGAAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: TTYQKWRLRYKFSKEELHLGWGD*RRRDPA
Trigger: GGCTGGGTCTCTTCTGCGTCAGTCGCCCCAGCCAAG...ATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TTTCTTTACTGTATGCAGAGGGTTGATCCTTTAGGGTCTGACAATGCATCATGGCAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: FLYCMQRVDPLGSDNASWQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...CCATGATGCATTGTCAGACCCTAAAGGATCAACCCTCTGCATACAGTAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651899.1
CDS-3UTR GCA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCAGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGCCATGCCCACCACATaGTGCCCAAGGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFAMPTT*CPRRRP
Trigger: TGGCCGCCGCCTTGGGCAGCATGTGGTGGGCATGGC...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp CAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QETSVPTHPHIIQKRNRGNLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...GCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp TCAGCCTTGCAAAGACCGAGCCATGATGGGATGCTCCTGAACAGGATGGCCCAGTCACGATTCAAATCATaGAAATGTGATGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SALQRPSHDGMLLNRMAQSRFKS*KCDESS
Trigger: TGAGGACTCATCACATTTGCATGATTTGAATCGTGA...CTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTCTGTTCAGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FCSDVSQMTRAPYFPSTSRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...GCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTGAACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp ACGCCATTTCTCAGAATGTATCTTCCTATTAAGAGACGCATGACCGTACAGGCATTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TPFLRMYLPIKRRMTVQAFWASL*SQISAT
Trigger: AGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAA...TGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAGAAATGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CCA 90 bp AATCCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTAATCTGCCTTACAGCTaGCCAGGAAACCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: NPCGTSNITREVPRQKHGNLPYS*PGNLST
Trigger: GGTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATT...ACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCAGACGTCAGCTCTCTGGGTAACTaGACTACTCTAATTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CCPRRRPTSSRFVFCSDVSSLGN*TTLISV
Trigger: AACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCT...GACGTCTGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR TCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTCTTGGCTGGGGCGACTaGCGCAGAAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLLGWGD*RRRDPA
Trigger: GGCTGGGTCTCTTCTGCGTCAGTCGCCCCAGCCAAG...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TTYQKWRLRYKFSKEELHSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...ATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp GTTTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: VFRVVKGTSSNVLSISHLRSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...CAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp GAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: EGVIFKVLRAVKRRCSARRSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...TCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp AGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTCAACTGATCCTTGAGTaGGCCTTCTCTGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SYILKVLFLRCLEQSRGGQLILE*AFSVRP
Trigger: GGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTG...ACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGCAACTGATCCTTGAGTaGGCCTTCTCTGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWQLILE*AFSVRP
Trigger: GGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTG...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp CCTTCAAAGCATACTACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACCAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: PSKHTTDNHKEENPHFPDQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...GTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGTAGTATGCTTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCACCTTCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: TLHCSVDIRANVEPRWHLHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...AAGGTGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR GCA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCAGGTACTCTATGATGTaGATAAGCCAAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: CTYCPKVMEGSSKYGWDSRYSMM*ISQNLL
Trigger: TAGGAGATTTTGGCTTATGCACATCATAGAGTACCT...GCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR GCA 90 bp GCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGAAGAATGTCAAAATCTaGCTTACAGCTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ARKPQYPPTHTSSKREIGKNVKI*LTAGQE
Trigger: TTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTT...CCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAACTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGTTCTATGTCATAAACTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVHSVAKQKQNKRVLCHKLQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...TTTATGACATAGAACTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp CAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGACAATCACAAATTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QCVYHCRAPSKHTTDNHKLVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...TTTGTGATTGTCTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGTTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMLVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TCAGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SVSAASSPSPHSNRTKSTQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...AGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp CCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTTCATCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: PCGTSNITREVPRQKHGSSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...TGAACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCATCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp GTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGGGCTGGTTCCTAGCCTaGGACCCAATTGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: VIFKVLRAVKRRCSARSWGWFLA*DPIAKA
Trigger: GGCTTTAGCAATTGGGTCCCAGGCTAGGAACCAGCC...CCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp GTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGGAGACAGCTCCAATTTaGAAAGGCAGACCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VIFKVLRAVKRRCSARSWETAPI*KGRPQR
Trigger: CCGCTGGGGTCTGCCTTTCCAAATTGGAGCTGTCTC...CCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp TATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGATCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YQYLTWKIYSNHCSALQRSAAAS*GAPCWR
Trigger: CCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGA...TCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp CTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LTWKIYSNHCSALQRPSHKPTDP*VSLLCQ
Trigger: CTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTT...ATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp ACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTAGGTTTGAACAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: TDNHKEENPHFPDNSRFEQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...TTCAAACCTAGAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATTAATTTCATTAAATaGGGCCAGAACCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EVRDSALLRGHKSQRRTQINFIK*GQNQCV
Trigger: GACACACTGGTTCTGGCCTCATTTAATGAAATTAAT...CTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR GCA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACCTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: SGTRMSKSALQLARKPQYLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGATGATAAAATGTGTGCCTTaGCTGGGGCGACTGACGCAG +
Preference number: 4 (lower is better)
Translates to: KIYSNHCSALQRPSHDGMIKCVP*LGRLTQ
Trigger: CTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTAT...CATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp GTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGATAAAATGTGTGCCTTaGCTGGGGCGACTGACGCAG +
Preference number: 4 (lower is better)
Translates to: VIFKVLRAVKRRCSARSWIKCVP*LGRLTQ
Trigger: CTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTAT...CCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp TTTAGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCACTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSKEELHPEGVIFKVLRALQPSF*ASLWSQ
Trigger: CTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAG...TGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGATGTTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KIYSNHCSALQRPSHDGMLVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...CATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTAAATGAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATATCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LNEARTSVSTTAEHLQSISSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...TATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp CACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: HKVYYRHPLRLHILPQGNRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...ATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp CCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATGATGTGCTTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PGCSTIYHLGLCRYSMMCFWASL*SQISAT
Trigger: AGTGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAA...GCACATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CCA 90 bp CAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCAGCTCTCTGGGTAACTaGACTACTCTAATTTCTGTT +
Preference number: 4 (lower is better)
Translates to: QETSVPTHPHIIQKRNRGSSLGN*TTLISV
Trigger: AACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCT...GCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
3UTR CAA 72 bp CTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTaGCAAAGACCGAGCCATGATGGGATGCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LTWKIYSNHCSA*QRPSHDGMLLN
Trigger: GTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp GCCTGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGTTGTTTTTGAAAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ACSPRHYHVNKAHLLFLKIAKAN*SLSEPS
Trigger: AGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAAT...TTTCAAAAACAACAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCCACCAGCTTGTGAAGTaGGGGACTCTGCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSHQLVK*GTLHCS
Trigger: GGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTG...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp AATGCATCATGGTTCCAAGGGCTACTTGCTGGACCAACAGTTGAAATTTTAAATCCCAGCACCAGCTTGTaGAGTGAGGGACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: NASWFQGLLAGPTVEILNPSTSL*SEGLCI
Trigger: AATGCAGAGTCCCTCACTTCACAAGCTGGTGCTGGG...ATTTAAAATTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACCATGATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
CDS-3UTR TCA 90 bp AATCCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: NPCGTSNITREVPRQKHGHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...ACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ATTCCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACAAGACTCCGTCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: IPYSPGCSTIYHLGLCRYKTPSV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGACGGAGTCTT...GTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR TCA 90 bp AGAGTTTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACATGATGGGATGCTCCTaGACAGGATGGCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RVFRVVKGTSSNVLSISHMMGCS*TGWPSS
Trigger: TGAACTGGGCCATCCTGTTCAGGAGCATCCCATCAT...GTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp AAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAAGGAGCTTGGCAGCTTTaGTCCAGCCCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGTSSNVLSISHLEDIFKGAWQL*SSPPSG
Trigger: CCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCC...TTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp AGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SYILKVLFLRCLEQSRGGVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...ACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR GCA 90 bp CCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGACAATCACAAAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PVCLPLQSTFKAYYRQSQNLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...TTGTGATTGTCTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp CCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATGATGTGCATAAAATGTGTGCCTTaGCTGGGGCGACTGACGCAG +
Preference number: 4 (lower is better)
Translates to: PGCSTIYHLGLCRYSMMCIKCVP*LGRLTQ
Trigger: CTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTAT...GCACATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CCA 90 bp GATACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTATCCTCCCTTGGAGCTTaGCAGCTTTGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DTTYQKWRLRYKFSKEELSSLGA*QLCSSP
Trigger: AGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGA...TAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMLVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp GTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VIFKVLRAVKRRCSARSWQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...CCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAAGATCTCTGCCTGTTTaGGGTCCCCGCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVRSLPV*GPRHKS
Trigger: AGACTTGTGGCGGGGACCTCAAACAGGCAGAGATCT...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp AGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCCAACTGATCCTTGAGTaGGCCTTCTCTGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RHILKCAINISPGRYIQIQLILE*AFSVRP
Trigger: GGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTG...GATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTCAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTCAGACGTCTCACAGATaGCCAGGGCCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLQTSHR*PGPHTS
Trigger: GGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTG...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGTGGCACCTTCACCCATaGAGCTCGTTTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMWHLHP*SSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCA...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GTGAGCTCTCTGGGTAACTGGACTACTCTAATTTCTGTTTCTGGCACAAGAATGAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSSLGNWTTLISVSGTRMNLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...CATTCTTGTGCCAGAAACAGAAATTAGAGTAGTCCAGTTACCCAGAGAGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp AAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGATGATCATTGCTCAGCCTTaGAAAGACCGAGCCATGATG +
Preference number: 4 (lower is better)
Translates to: KIYSNHCSALQRPSHDGMIIAQP*KDRAMM
Trigger: CATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGAT...CATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCTCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SKEELHPEGVIFKVLRAVSVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...GACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCCTAGGTTTACAGGCGTaGGCCACTGCACTTTACTGT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSLGLQA*ATALYC
Trigger: ACAGTAAAGTGCAGTGGCTCACGCCTGTAAACCTAG...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323833.12
CDS-3UTR TCA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTCAACTGATCCTTGAGTaGGCCTTCTCTGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFQLILE*AFSVRP
Trigger: GGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTG...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWIAKAN*SLSEPS
Trigger: AGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAAT...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TCCGAGGCAGAAGCACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGATTAATTTCATTAAATaGGGCCAGAACCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SEAEARFTVSQSKNRTKEINFIK*GQNQCV
Trigger: GACACACTGGTTCTGGCCTCATTTAATGAAATTAAT...CTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGTGCTTCTGCCTCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp CTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGGCAAAGACCGAGCCATaGTGGGATGCTCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: LKCAINISPGRYIQIIAQAKTEP*WDAPEQ
Trigger: CTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGC...CTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp AAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAAGGTGCCGACACACCAATCCTaGTCATTAAGCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KSGDSDTSLVKKSYILKVPTHQS*SLSRGL
Trigger: CAAACCCCTGCTTAATGATCAGGATTGGTGTGTCGG...CACCTTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR GCA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTCAGCATCTTAGTCTCTaGCTCTCCCCCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFQHLSL*LSPRLI
Trigger: GATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTG...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTATCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVSVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
3UTR CAA 72 bp CAAAATCTGTCTCACAGTTTACCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACAGCCCAATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QNLSHSLPLLIQ*CFLPATAQSGL
Trigger: AAGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGGTAAACTGTGAGACAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR TCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVKPTDP*VSLLCQ
Trigger: CTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTT...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp GTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCATTGGATTCAGGAAGCTaGAGTTCAGAGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VKKSYILKVLFLRCLEQSLDSGS*SSETAP
Trigger: TGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAA...TGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR GCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp CTATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSISHLEDIFKSLLSLAKVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...CTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp CCTTCAAAGCATACTACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACCTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PSKHTTDNHKEENPHFPDLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...GTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGTAGTATGCTTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp CCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTCTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PYSPGCSTIYHLGLCRYSLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...AGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR GCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCCAGTGTGTCTACCACTaGAGAGCACCTTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSQCVYH*RAPSKH
Trigger: ATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTATAAAATGTGTGCCTTaGCTGGGGCGACTGACGCAG +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLIKCVP*LGRLTQ
Trigger: CTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTAT...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTAGGTTTGAATCAATATTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NHKEENPHFPDNSRFESILVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...TATTGATTCAAACCTAGAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TTTAGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCATTGGTCTTCCTCCCTTaGAGCTTGGCAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FSKEELHPEGVIFKVLRALVFLP*SLAALL
Trigger: GAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAA...TGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAACAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp CAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: QYLTWKIYSNHCSALQRPSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...CGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp AAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCTGTCAGGCCCAGCTaGAAGTCCAGAAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KGTSSNVLSISHLEDIFKSVRPS*KSRKLR
Trigger: TCTGAGCTTTCTGGACTTCCAGCTGGGCCTGACAGA...TTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTAACGTAGAACCCAGATaGCACCTTCACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFNVEPR*HLHPCS
Trigger: GCTGCATGGGTGAAGGTGCCATCTGGGTTCTACGTT...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TCAGTTTCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SVSAASSPSPHSNRTKSTRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...AGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CCA 90 bp TGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGTTGTTTTTGAAAGGCCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CSPRHYHVNKAHLLFLKGRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...GCCTTTCAAAAACAACAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YQKWRLRYKFSKEELHPEKPTDP*VSLLCQ
Trigger: CTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTT...TTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp CAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAAGGTATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QKWRLRYKFSKEELHPEGIAKAN*SLSEPS
Trigger: AGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAAT...ACCTTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp AAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGATGTCTTTAAGAGTCTTGTaGGTCTGTAGAGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KIYSNHCSALQRPSHDGMSLRVL*VCRVFR
Trigger: CCTGAAAACTCTACAGACTCACAAGACTCTTAAAGA...CATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTGTTGTGTTTCCTTCCTaGAACAGCCCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLVVFPS*NSPIRP
Trigger: AGGCCTGATTGGGCTGTTGCAGGAAGGAAACACAAC...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTGGCACCTTCACCCATaGAGCTCGTTTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSWHLHP*SSFKNH
Trigger: ATGATTCTTAAACGAGCTGCATGGGTGAAGGTGCCA...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ACGGTTCACAGTGTCGCAAAGCAAAAACAGAACAAAAGAGTTCTATGTCATAAACAGTGTGTCTACCACTaGAGAGCACCTTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: TVHSVAKQKQNKRVLCHKQCVYH*RAPSKH
Trigger: ATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTG...TTTATGACATAGAACTCTTTTGTTCTGTTTTTGCTTTGCGACACTGTGAACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CCA 90 bp TCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCAATCAGGCCTTCTTTaGTCTTCCTCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SNVLSISHLEDIFKSLLSQSGLL*SSSLGA
Trigger: AGCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTG...GCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR TCA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQIAKAN*SLSEPS
Trigger: AGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAAT...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTACTATTCAGTTTCTGCTaGCTCTTCACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVLFSFC*LFTFST
Trigger: TGTGGAGAAGGTGAAGAGGCAGCAGAAACTGAATAG...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVNLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTATCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp ACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATTCTGACAATGCATCATaGTTCCAAGGGCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: TTYQKWRLRYKFSKEELHSDNAS*FQGLLA
Trigger: AGCAAGTAGCCCTTGGAACCATGATGCATTGTCAGA...ATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTCCAGCAAATACGGCTaGGACAGCATCTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLSSKYG*DSILVS
Trigger: AGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGA...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGCGGTCTGAAGAGGTTTaGGAAATATTCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWRSEEV*EIFLFV
Trigger: TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCG...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CCA 90 bp AAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGATGTTCTGCAAGAAGTTaGATTCAGGAAGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: KSYILKVLFLRCLEQSRGCSARS*IQEAEV
Trigger: AACTTCAGCTTCCTGAATCCAACTTCTTGCAGAACA...TCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR TCA 90 bp AAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KGTSSNVLSISHLEDIFKIAKAN*SLSEPS
Trigger: AGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAAT...TTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTAACCTATTCAGTTTCTaGTGCCTCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLNLFSF*CLFTFS
Trigger: GGAGAAGGTGAAGAGGCAGCAGAAACTGAATAGGTT...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR TCA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTCATGCATTCTCGGTCTaGAGAGGTTTGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLHAFSV*RGLGNI
Trigger: AATATTTCCCAAACCTCTTCAGACCGAGAATGCATG...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR GCA 90 bp ATTCCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACAGGTACTCTATGATGTaGATAAGCCAAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: IPYSPGCSTIYHLGLCRYRYSMM*ISQNLL
Trigger: TAGGAGATTTTGGCTTATGCACATCATAGAGTACCT...GTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR GCA 90 bp AATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTAGGTTTGAATCAATAAAGAATGTCAAAATCTaGCTTACAGCTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NHKEENPHFPDNSRFESIKNVKI*LTAGQE
Trigger: TTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTT...TATTGATTCAAACCTAGAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR GCA 90 bp GTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATAATATATTCAAATCATTaGTCAGCCTTGCAAAGACCG +
Preference number: 4 (lower is better)
Translates to: VVKGTSSNVLSISHLEDIIYSNH*SALQRP
Trigger: CGGTCTTTGCAAGGCTGAGCAATGATTTGAATATAT...TATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR GCA 90 bp CTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGGCACATCCTCAAATGTaGTATCAATATCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LKCAINISPGRYIQIIAQAHPQM*YQYLTW
Trigger: CCAGGTGAGATATTGATAGCACATTTGAGGATGTGC...CTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CCA 90 bp AGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCACCACCTATCAAAAGTaGAGACTCAGATACAAGTTT +
Preference number: 4 (lower is better)
Translates to: SKEELHPEGVIFKVLRAVTTYQK*RLRYKF
Trigger: AAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGT...GACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
3UTR CAA 72 bp TATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTaGTGTAGGTACTCTATGATGTGCATAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YSPGCSTIYHLG*CRYSMMCISQN
Trigger: ATTTTGGCTTATGCACATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR TCA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAAATTAATTTCATTAAATaGGGCCAGAACCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQINFIK*GQNQCV
Trigger: GACACACTGGTTCTGGCCTCATTTAATGAAATTAAT...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS CCA 90 bp GTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAGATCTCTGCCATTGCACGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: VFLPWSLAALLQPSF*ASLWSQISAIARRP
Trigger: AGGCCGGCGTGCAATGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497617.1
CDS CCA 90 bp GTCTTCCTCCCTTGGAGCTTGGCAGCTTTGCTCCAGCCCTCCTTCTaGGCCTCCTTGTGGAGCCAGATCTCTGCCTGTTTGAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VFLPWSLAALLQPSF*ASLWSQISACLRSP
Trigger: CGGGGACCTCAAACAGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCAAGGGAGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323833.12
ENST00000434359.5
ENST00000457189.1
ENST00000540550.6
ENST00000543727.5
ENST00000548851.5
ENST00000550559.5
ENST00000651899.1
ENST00000652027.2
CDS TCA 90 bp TCTTGCAATTTACAAAGGAGTAGCCTGTTTTCCGCCGCAGCTTCATaGGGAGCTCCTTGCTGGAGGCCGAGGCAGACAGACGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SCNLQRSSLFSAAAS*GAPCWRPRQTDGAQ
Trigger: CTGGGCCCCGTCTGTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAAGCTGCGGCGGAAAACAGGCTACTCCTTTGTAAATTGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323833.12
ENST00000417094.5
ENST00000434359.5
ENST00000457189.1
ENST00000497617.1
ENST00000540550.6
ENST00000543727.5
ENST00000548851.5
ENST00000550559.5
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp AGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCTTGTGAAGCAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: RRLTDDQGPILPQHQLVKQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...CTTCACAAGCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651899.1
CDS-3UTR CAA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: CTYCPKVMEGSSKYGWDSSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...GCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp TGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CTYCPKVMEGSSKYGWDSWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...GCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp TTCTGTTCAGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCCAAGACTCCGTCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: FCSDVSQMTRAPYFPSTSQDSVC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGACGGAGTCTTG...GCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCTGAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR CAA 90 bp GCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAATTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: APACEVRDSALLRGHKSQFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...TTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp CACCCCCTGAGGCTGCACATACTGCCCCAAGGTAATGGAGGGATCCAGCAAATACAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: HPLRLHILPQGNGGIQQIQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...TATTTGCTGGATCCCTCCATTACCTTGGGGCAGTATGTGCAGCCTCAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651899.1
CDS-3UTR CAA 90 bp AGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGATGGCATGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RDSALLRGHKSQRRTQMAWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...TGCCATCTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp GAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACGTAGAACCCAGTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: EVRDSALLRGHKSQRRTQWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...CTGGGTTCTACGTTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp AGACCGAGCCATGATGGGATGCTCCTGAACAGGATGGCCCAGTTCATCTCACGACCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: RPSHDGMLLNRMAQFISRPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...TCGTGAGATGAACTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp GAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGCAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: EARTSVSTTAEHLQSILQQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...CTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000652027.2
CDS-3UTR CAA 90 bp CCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTTCATCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PCGTSNITREVPRQKHGSSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...TGAACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ACCACATGCTGCCCAAGGCGGCGGCCAACGTCTTCAAGGTTTGTTTTCTGTTCACCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: TTCCPRRRPTSSRFVFCSPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...TGAACAGAAAACAAACCTTGAAGACGTTGGCCGCCGCCTTGGGCAGCATGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp CAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCTCCCCCAGGCTCATCGTCGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: QIRLGQHLSLCLSPRLIVGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...GACGATGAGCCTGGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp GGTAATGGAGGGATCCAGCAAATACGGCTGGGACAGCATCTTAGTCTCTGCCTCGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: GNGGIQQIRLGQHLSLCLVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...GAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCATCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GAGGCCAGAACCAGTGTGTCTACCACTGCAGAGCACCTTCAAAGCATACTACAGCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: EARTSVSTTAEHLQSILQPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...CTGTAGTATGCTTTGAAGGTGCTCTGCAGTGGTAGACACACTGGTTCTGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GGCCAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: GQETSVPTHPHIIQKRNRVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...CCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGTTGTTTTTGAAAGGCTTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: CSPRHYHVNKAHLLFLKGFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...GCCTTTCAAAAACAACAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAAAAGGGAGCAGCAGTATaGTTGATGCCTGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: APACEVRDSALLRGHKSQKGAAV*LMPVLH
Trigger: GTGGAGAACAGGCATCAACAATACTGCTGCTCCCTT...TTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS TCA 90 bp AGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTGGATTCAGGAAGCTaGAGTTCAGAGACAGCTCCAATTTGGAAAGGCAGACCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SSQEEVFCKKLDSGS*SSETAPIWKGRPQR
Trigger: CCGCTGGGGTCTGCCTTTCCAAATTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAACTTCTTGCAGAACACCTCCTCTTGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS TCA 90 bp GAGACAGCTCCAATTTGGAAAGGCAGACCAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCTCTGTCAGGCCCAGCTGGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: ETAPIWKGRPIAKAN*SLSEPSLSGPAGSP
Trigger: TGGACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGTCTGCCTTTCCAAATTGGAGCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543727.5
CDS-3UTR CAA 90 bp AGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCAATAAGGCCCACCTGCATAAAATGTGTGCCTaGGCTGGGGCGACTGACGCA +
Preference number: 5 (lower is better)
Translates to: SIVDACSPRHYHVNKAHLHKMCA*AGATDA
Trigger: TGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATG...CAGGTGGGCCTTATTGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WKIYSNHCSALQRPSHDGSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...CCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCACCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATAGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: STFKPHKVYYRHPLRLHIGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGTRMSKSALQLARKPQYVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCACAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: QTAQSLLPTPPEAAHTAPQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...TGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp CAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACTGCCCCAAATAAGGCCCACCTGTaGTTTTTGAAAGGCACAGAA +
Preference number: 5 (lower is better)
Translates to: QTAQSLLPTPPEAAHTAPNKAHL*FLKGTE
Trigger: TTCTGTGCCTTTCAAAAACAACAGGTGGGCCTTATT...TGGGGCAGTATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000540550.6
ENST00000651066.1
CDS-3UTR CAA 90 bp CAGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCAAGGGAGCAGCAGTATaGTTGATGCCTGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QETSVPTHPHIIQKRNRGKGAAV*LMPVLH
Trigger: GTGGAGAACAGGCATCAACAATACTGCTGCTCCCTT...GCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS TCA 90 bp CTCCAATTTGGAAAGGCAGACCAATTGCTAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAGGCCCAGCTGGAAGTCCAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LQFGKADQLLKPTDP*VSLLCQAQLEVQKA
Trigger: AGCTTTCTGGACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGTCTGCCTTTCCAAATTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543727.5
CDS-3UTR CAA 90 bp ACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATTTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TWKIYSNHCSALQRPSHDFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...ATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp AGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTTTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SYILKVLFLRCLEQSRGGFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...ACCTCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS TCA 90 bp AAATGTGATGAGTCCTCAGCACAATTGCTAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAGGCCCAGCTGGAAGTCCAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: KCDESSAQLLKPTDP*VSLLCQAQLEVQKA
Trigger: AGCTTTCTGGACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGTGCTGAGGACTCATCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp TCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCACATAAAATGTGTGCCTaGGCTGGGGCGACTGACGCA +
Preference number: 5 (lower is better)
Translates to: SHLEDIFKSLLSLAKTEPHKMCA*AGATDA
Trigger: TGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATG...TGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp CTCAGAATGTATCTTCCTATTAAGAGACGCATGACCGTACAGGCAAAAACTACATTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LRMYLPIKRRMTVQAKTTFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...TGTAGTTTTTGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACTCTATGATGTGCTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGCSTIYHLGLCRYSMMCSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...GCACATCATAGAGTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CAA 90 bp CCTTCAAAGCATACTACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSKHTTDNHKEENPHFPDWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...GTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGTAGTATGCTTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GCACCAGCTTGTGAAGTGAGGGACTCTGCATTGCTCCGTGGACATAAGAGCCAACAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: APACEVRDSALLRGHKSQQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...TTGGCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCACTTCACAAGCTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp AGACGTCTCACAGATGACCAGGGCCCCATACTTCCCCAGCACCAGCTTGTGAAGATATACCATCTAGGTTaGTGTAGGTACTCTATGATG +
Preference number: 5 (lower is better)
Translates to: RRLTDDQGPILPQHQLVKIYHLG*CRYSMM
Trigger: CATCATAGAGTACCTACACAAACCTAGATGGTATAT...CTTCACAAGCTGGTGCTGGGGAAGTATGGGGCCCTGGTCATCTGTGAGACGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS TCA 90 bp ATCATTGCTCAGCCTTGCAAAGACCGAGCCATGATGGGATGCTCCTaGACAGGATGGCCCAGTTCATCTCACGATTCAAATCATGCAAAT +
Preference number: 5 (lower is better)
Translates to: IIAQPCKDRAMMGCS*TGWPSSSHDSNHAN
Trigger: ATTTGCATGATTTGAATCGTGAGATGAACTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp AATGCATCATGGTTCCAAGGGCTACTTGCTGGACCAACAGTTGAAATTTTAAATTTCATGAGGAGCTCCTaGCTGGAGGCCGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: NASWFQGLLAGPTVEILNFMRSS*LEAEAD
Trigger: GTCTGCCTCGGCCTCCAGCAAGGAGCTCCTCATGAA...ATTTAAAATTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACCATGATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp GTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCATCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VKKSYILKVLFLRCLEQSSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...TGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp TCCACATTCAAACCGCACAAAGTCTACTACCGACACCCCCTGAGGCTGCACATACCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: STFKPHKVYYRHPLRLHIPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...TATGTGCAGCCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp AGGAAACCTCAGTACCCACCCACCCACACATCATCCAAAAGAGAAATAGGGGCACTCCCAGTTTTCCAATaGCTAAAGCCAACTGATCCT +
Preference number: 5 (lower is better)
Translates to: RKPQYPPTHTSSKREIGALPVFQ*LKPTDP
Trigger: AGGATCAGTTGGCTTTAGCAATTGGAAAACTGGGAG...TGCCCCTATTTCTCTTTTGGATGATGTGTGGGTGGGTGGGTACTGAGGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS TCA 90 bp GAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCATaGTGGGATGCTCCTGAACAGGATGGCCCAGTTCATCTCACGATT +
Preference number: 5 (lower is better)
Translates to: EDIFKSLLSLAKTEP*WDAPEQDGPVHLTI
Trigger: AATCGTGAGATGAACTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGCATAAAATGTGTGCCTaGGCTGGGGCGACTGACGCA +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMHKMCA*AGATDA
Trigger: TGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATG...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ATAAGCCAAAATCTCCTAACGACGCCATTTCTCAGAATGTATCTTCCTATTAAGTCCTTCTGGGCCTCCTaGTGGAGCCAGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ISQNLLTTPFLRMYLPIKSFWAS*WSQISA
Trigger: GGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGA...CTTAATAGGAAGATACATTCTGAGAAATGGCGTCGTTAGGAGATTTTGGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CAA 90 bp ATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: MCYQYLTWKIYSNHCSALWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...CAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp GATACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTATGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DTTYQKWRLRYKFSKEELWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...TAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TCTGCTGCCTCTTCACCTTCTCCACATTCAAACCGCACAAAGTCTACTACCGACCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: SAASSPSPHSNRTKSTTDPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...GTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGGTGAGGGACTCTGCATaGCTCCGTGGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMVRDSA*LRGHKS
Trigger: GCTCTTATGTCCACGGAGCAATGCAGAGTCCCTCAC...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ATTCCATATAGCCCAGGTTGTAGTACAATATACCATCTAGGTTTGTGTAGGTACCAAGACTCCGTCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: IPYSPGCSTIYHLGLCRYQDSVC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGACGGAGTCTTG...GTACCTACACAAACCTAGATGGTATATTGTACTACAACCTGGGCTATATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CAA 90 bp ACGCCATTTCTCAGAATGTATCTTCCTATTAAGAGACGCATGACCGTACAGGCAAAGGGAGCAGCAGTATaGTTGATGCCTGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TPFLRMYLPIKRRMTVQAKGAAV*LMPVLH
Trigger: GTGGAGAACAGGCATCAACAATACTGCTGCTCCCTT...TGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAGAAATGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651066.1
CDS-3UTR CAA 90 bp ATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTACAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: ILPMHSRSEEVWEIFLFVQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...TACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTGGAGCTTGGCAGCTTaGCTCCAGCCCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLWSLAA*LQPSFW
Trigger: CCAGAAGGAGGGCTGGAGCAAAGCTGCCAAGCTCCA...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp AGAGTTTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RVFRVVKGTSSNVLSISHFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...GTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp CAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAAGGTCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: QKWRLRYKFSKEELHPEGPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...ACCTTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp AATCCATGTGGCACAAGTAATATAACTAGGGAGGTTCCGAGGCAGAAGCACGGTCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: NPCGTSNITREVPRQKHGPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...ACCGTGCTTCTGCCTCGGAACCTCCCTAGTTATATTACTTGTGCCACATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TTGAAGGGAGCAGCAGTATTGTTGATGCCTGTTCTCCACGACACTATCACGTCACAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: LKGAAVLLMPVLHDTITSQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...TGACGTGATAGTGTCGTGGAGAACAGGCATCAACAATACTGCTGCTCCCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TCTGGCACAAGAATGTCAAAATCTGCCTTACAGCTGGCCAGGAAACCTCAGTACCAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: SGTRMSKSALQLARKPQYQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...GTACTGAGGTTTCCTGGCCAGCTGTAAGGCAGATTTTGACATTCTTGTGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TCTCACCTGGAAGATATATTCAAATCATTGCTCAGCCTTGCAAAGACCGAGCCAAATCATTGCTCAGCCTaGCAAAGACCGAGCCATGAT +
Preference number: 5 (lower is better)
Translates to: SHLEDIFKSLLSLAKTEPNHCSA*QRPSHD
Trigger: ATCATGGCTCGGTCTTTGCAAGGCTGAGCAATGATT...TGGCTCGGTCTTTGCAAGGCTGAGCAATGATTTGAATATATCTTCCAGGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp GTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGACAGCTCCAATTaGGAAAGGCAGACCCCAGCG +
Preference number: 5 (lower is better)
Translates to: VKKSYILKVLFLRCLEQSRDSSN*ERQTPA
Trigger: CGCTGGGGTCTGCCTTTCCAAATTGGAGCTGTCTCT...TGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS CCA 90 bp TTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTaGATTCAGGAAGCTGAAGTTCAGAGACAGCTCCAATTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FKVLRAVKRRCSARS*IQEAEVQRQLQFGK
Trigger: CTTTCCAAATTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAGCACCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp ATAAGCCAAAATCTCCTAACGACGCCATTTCTCAGAATGTATCTTCCTATTAAGCATAAAATGTGTGCCTaGGCTGGGGCGACTGACGCA +
Preference number: 5 (lower is better)
Translates to: ISQNLLTTPFLRMYLPIKHKMCA*AGATDA
Trigger: TGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATG...CTTAATAGGAAGATACATTCTGAGAAATGGCGTCGTTAGGAGATTTTGGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417094.5
ENST00000651066.1
CDS-3UTR CAA 90 bp ACCACCTATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCATAAAATGTGTGCCTaGGCTGGGGCGACTGACGCA +
Preference number: 5 (lower is better)
Translates to: TTYQKWRLRYKFSKEELHHKMCA*AGATDA
Trigger: TGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATG...ATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATAGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp AAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAACAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: KGTSSNVLSISHLEDIFKQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...TTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp TTTAGTAAAGAAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCACAGATCTCTGCCTGTTaGAGGTCCCCGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: FSKEELHPEGVIFKVLRAQISAC*RSPPQV
Trigger: GACTTGTGGCGGGGACCTCAAACAGGCAGAGATCTG...TGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTTCTTTACTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp AAAGCATACTACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KAYYRQSQRREPTFSRQLFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...GAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGTAGTATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp AAGAGCTACATCCTGAAGGTGTTATTTTTAAGGTGCTTAGAGCAGTCAAGAGGAGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: KSYILKVLFLRCLEQSRGGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...TCCTCTTGACTGCTCTAAGCACCTTAAAAATAACACCTTCAGGATGTAGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp TCATATATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAATTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SYMHSIGKIQIPRSVMCQFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...TTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCATATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TTAATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTCCAATCAGGCCTTCTTaGGTCTTCCTCCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LIILPMHSRSEEVWEIFLPIRPS*VFLPWS
Trigger: GCTCCAAGGGAGGAAGACCAAAGAAGGCCTGATTGG...AAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ATGCACTCCATAGGCAAAATCCAAATACCCAGATCTGTAATGTGTCAAAGCATTGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: MHSIGKIQIPRSVMCQSIGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...AATGCTTTGACACATTACAGATCTGGGTATTTGGATTTTGCCTATGGAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGTCCGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: MHSRSEEVWEIFLFVMMSGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...GGACATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGCTCCCAGTTTTCCAATaGCTAAAGCCAACTGATCCT +
Preference number: 5 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWLPVFQ*LKPTDP
Trigger: AGGATCAGTTGGCTTTAGCAATTGGAAAACTGGGAG...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323833.12
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp ATAATTTTACCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTTTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: IILPMHSRSEEVWEIFLFFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...AAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGGTAAAATTAT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp TATCAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAATTTGGTCTTCCTCCCTaGGAGCTTGGCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: YQKWRLRYKFSKEELHPEFGLPP*ELGSFA
Trigger: AGCAAAGCTGCCAAGCTCCAAGGGAGGAAGACCAAA...TTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp GTAATGATGTCCAGAGCTAAAAGTAAATATTCCTCCTGGGCCAAAAGTCTCTGGCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: VMMSRAKSKYSSWAKSLWPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...CCAGAGACTTTTGGCCCAGGAGGAATATTTACTTTTAGCTCTGGACATCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp GTTTTCAGGGTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: VFRVVKGTSSNVLSISHLPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...CAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTACCCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp GTAGTGAAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATAGAGTCCTCAGCACAATaGCTAAAGCCAACTGATCCT +
Preference number: 5 (lower is better)
Translates to: VVKGTSSNVLSISHLEDIESSAQ*LKPTDP
Trigger: AGGATCAGTTGGCTTTAGCAATTGTGCTGAGGACTC...TATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTTCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp AAAGGCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAAGGTTCCAAGGGCTACTaGCTGGACCAACAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: KGTSSNVLSISHLEDIFKGSKGY*LDQQLK
Trigger: TTTCAACTGTTGGTCCAGCAAGTAGCCCTTGGAACC...TTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS-3UTR CAA 90 bp ACAGACAATCACAAAGAAGAGAACCCACATTTTCCAGACAACTCTAGGTTTGAACTCCCAGTTTTCCAATaGCTAAAGCCAACTGATCCT +
Preference number: 5 (lower is better)
Translates to: TDNHKEENPHFPDNSRFELPVFQ*LKPTDP
Trigger: AGGATCAGTTGGCTTTAGCAATTGGAAAACTGGGAG...TTCAAACCTAGAGTTGTCTGGAAAATGTGGGTTCTCTTCTTTGTGATTGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGCAACGTCTTCAAGGTTaGTTTTCTGTTCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMQRLQG*FSVQTS
Trigger: AGACGTCTGAACAGAAAACAAACCTTGAAGACGTTG...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323833.12
ENST00000540550.6
ENST00000651066.1
ENST00000651899.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CCCATGCATTCTCGGTCTGAAGAGGTTTGGGAAATATTCCTTTTTGTAATGATGAATAAGGCCCACCTGTaGTTTTTGAAAGGCACAGAA +
Preference number: 5 (lower is better)
Translates to: PMHSRSEEVWEIFLFVMMNKAHL*FLKGTE
Trigger: TTCTGTGCCTTTCAAAAACAACAGGTGGGCCTTATT...CATCATTACAAAAAGGAATATTTCCCAAACCTCTTCAGACCGAGAATGCATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000540550.6
ENST00000651066.1
ENST00000652027.2
CDS-3UTR CAA 90 bp CAAAAGTGGAGACTCAGATACAAGTTTAGTAAAGAAGAGCTACATCCTGAAGGTCCTCTACTAATACAGTaGTGTTTCCTTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: QKWRLRYKFSKEELHPEGPLLIQ*CFLPAT
Trigger: TGTTGCAGGAAGGAAACACAACTGTATTAGTAGAGG...ACCTTCAGGATGTAGCTCTTCTTTACTAAACTTGTATCTGAGTCTCCACTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS-3UTR CAA 90 bp GCACATCCTCAAATGTGCTATCAATATCTCACCTGGAAGATATATTCAAATCATGATATATTCAAATCATaGCTCAGCCTTGCAAAGACC +
Preference number: 5 (lower is better)
Translates to: AHPQMCYQYLTWKIYSNHDIFKS*LSLAKT
Trigger: GGTCTTTGCAAGGCTGAGCAATGATTTGAATATATC...ATGATTTGAATATATCTTCCAGGTGAGATATTGATAGCACATTTGAGGATGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS CCA 72 bp GCAGCTTTGCTCCAGCCCTCCTTCTGGGCCTCCTTGTaGAGCCAGATCTCTGCCTGTTTGAGGTCCCCGCCA +
Preference number: 6 (lower is better)
Translates to: AALLQPSFWASL*SQISACLRSPP
Trigger: TGGCGGGGACCTCAAACAGGCAGAGATCTGGCTCCACAAGGAGGCCCAGAAGGAGGGCTGGAGCAAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323833.12
ENST00000434359.5
ENST00000457189.1
ENST00000540550.6
ENST00000543727.5
ENST00000548851.5
ENST00000550559.5
ENST00000651899.1
ENST00000652027.2
CDS TCA 72 bp CAGACCCCAGCGGCCGAGATCCCGACACACCAATCCTaGTCATTAAGCAGGGGTTTGAGCCTCCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: QTPAAEIPTHQS*SLSRGLSLPSS
Trigger: TGAAGATGGGAGGCTCAAACCCCTGCTTAATGATCAGGATTGGTGTGTCGGGATCTCGGCCGCTGGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS CAA 72 bp GGATTCAGGAAGCTGAAGTTCAGAGACAGCTCCAATTaGGAAAGGCAGACCCCAGCGGCCGAGATCCCGACA +
Preference number: 6 (lower is better)
Translates to: GFRKLKFRDSSN*ERQTPAAEIPT
Trigger: TGTCGGGATCTCGGCCGCTGGGGTCTGCCTTTCCAAATTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS TCA 72 bp TGGTTCCTAGCCTGGGACCCAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCTCTGTCAGGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: WFLAWDPIAKAN*SLSEPSLSGPA
Trigger: AGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGGTCCCAGGCTAGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS CAA 90 bp CAAGAAGTTGGATTCAGGAAGCTGAAGTTCAGAGACAGCTCCAATTaGGAAAGGCAGACCCCAGCGGCCGAGATCCCGACACACCAATCC +
Preference number: 6 (lower is better)
Translates to: QEVGFRKLKFRDSSN*ERQTPAAEIPTHQS
Trigger: GGATTGGTGTGTCGGGATCTCGGCCGCTGGGGTCTGCCTTTCCAAATTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAACTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS TCA 72 bp GAGTCCTCAGCACAATTGCTAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAGGCCCAGCTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: ESSAQLLKPTDP*VSLLCQAQLEV
Trigger: GACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGTGCTGAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS TCA 72 bp GGAAAGGCAGACCAATTGCTAAAGCCAACTGATCCTTaGGTGAGCCTTCTCTGTCAGGCCCAGCTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: GKADQLLKPTDP*VSLLCQAQLEV
Trigger: GACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGTCTGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543727.5
CDS TCA 72 bp CAGCCTTGCAAAGACCGAGCCATGATGGGATGCTCCTaGACAGGATGGCCCAGTTCATCTCACGATTCAAAT +
Preference number: 6 (lower is better)
Translates to: QPCKDRAMMGCS*TGWPSSSHDSN
Trigger: ATTTGAATCGTGAGATGAACTGGGCCATCCTGTTCAGGAGCATCCCATCATGGCTCGGTCTTTGCAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548851.5
CDS TCA 72 bp CCAATTTGGAAAGGCAGACCAATTGCTAAAGCCAACTaGTCCTTGAGTGAGCCTTCTCTGTCAGGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: PIWKGRPIAKAN*SLSEPSLSGPA
Trigger: AGCTGGGCCTGACAGAGAAGGCTCACTCAAGGATCAGTTGGCTTTAGCAATTGGTCTGCCTTTCCAAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543727.5
CDS TCA 72 bp GAGGAGGTGTTCTGCAAGAAGTTGGATTCAGGAAGCTaGAGTTCAGAGACAGCTCCAATTTGGAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: EEVFCKKLDSGS*SSETAPIWKGR
Trigger: TCTGCCTTTCCAAATTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAACTTCTTGCAGAACACCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543727.5
ENST00000550559.5
CDS CCA 72 bp CTTAGAGCAGTCAAGAGGAGGTGTTCTGCAAGAAGTTaGATTCAGGAAGCTGAAGTTCAGAGACAGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LRAVKRRCSARS*IQEAEVQRQLQ
Trigger: TTGGAGCTGTCTCTGAACTTCAGCTTCCTGAATCCAACTTCTTGCAGAACACCTCCTCTTGACTGCTCTAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550559.5
CDS TCA 72 bp CATTTCTCAGAATGTATCTTCCTATTAAGAGACGCATaGCCGTACAGGCAAAAACTACACAACTCATTGCAC +
Preference number: 6 (lower is better)
Translates to: HFSECIFLLRDA*PYRQKLHNSLH
Trigger: GTGCAATGAGTTGTGTAGTTTTTGCCTGTACGGTCATGCGTCTCTTAATAGGAAGATACATTCTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417094.5