RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSEN54 (Homo sapiens)

Ensembl gene IDs: ENSG00000182173

Ensembl transcript IDs: ENST00000333213.11, ENST00000434205.8, ENST00000545228.3, ENST00000577197.2, ENST00000578415.1, ENST00000579449.2, ENST00000580013.6, ENST00000583173.5, ENST00000583454.1, ENST00000583634.1, ENST00000583818.2, ENST00000679370.1, ENST00000679429.1, ENST00000679443.1, ENST00000679782.1, ENST00000679919.1, ENST00000679928.1, ENST00000680528.1, ENST00000680999.1, ENST00000681282.1

Found 1061 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: QLEHRCTSGSALTSS*NCAASAWCSRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 90 bp GAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: EHRCTSGSALTSSWN*AASAWCSRSRLESF
Trigger: GAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 90 bp CGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCC +
Preference number: 1 (lower is better)
Translates to: RRCSSSLYSRQLEHR*TSGSALTSSWNCAA
Trigger: GGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR TCA 90 bp TGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTT +
Preference number: 1 (lower is better)
Translates to: CTPASWSTAAPRDRR*HLPGTARPPRGAPV
Trigger: AACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 90 bp CGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGTCTCCC +
Preference number: 1 (lower is better)
Translates to: RPPRGAPVPAWRASP*AGSASGTRTQRLSP
Trigger: GGGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 90 bp GGGCTGGGGCGCGCAGAAGGGTGTGGCGGCTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTC +
Preference number: 1 (lower is better)
Translates to: GLGRAEGCGGCLKPC*GRRSARSSSAAYRL
Trigger: GAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 90 bp TCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGTCTCCCGCCCA +
Preference number: 1 (lower is better)
Translates to: SAWCSRSRLESFSLR*FSFWHQDSASVSRP
Trigger: TGGGCGGGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 90 bp CTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACT +
Preference number: 1 (lower is better)
Translates to: LPGTARPPRGAPVPA*RASPCAGSASGTRT
Trigger: AGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 90 bp CAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCC +
Preference number: 1 (lower is better)
Translates to: QGQGPDWPLKLQVRV*VQEAAEMVPENRQS
Trigger: GGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR TCA 90 bp CTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGG +
Preference number: 1 (lower is better)
Translates to: LCEYQTPRAKAQTGL*SYRLESGYRRQPRW
Trigger: CCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR GCA 90 bp CTGGAGCTGCTCCTCTTTCTCTTGCCATCTCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGG +
Preference number: 1 (lower is better)
Translates to: LELLLFLLPSPSSKC*TLASRLSCLSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCAGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
3UTR TCA 90 bp AGCCTCAATCCATCCCAGTTCATCCATGCCCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: SLNPSQFIHALSKVL*FLSCQWPSKMWQAE
Trigger: CTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAGGGCATGGATGAACTGGGATGGATTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR TCA 90 bp TCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCAT +
Preference number: 1 (lower is better)
Translates to: SFGMWPQRRPGKHQR*FPSPQTSPTAGHLH
Trigger: ATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR TCA 90 bp GCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTaGAGGACCACGGCTACAAGGACACAGAAAACAAGGTACTGGGGA +
Preference number: 1 (lower is better)
Translates to: APPSGRCVVCSTEIC*RTTATRTQKTRYWG
Trigger: TCCCCAGTACCTTGTTTTCTGTGTCCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR TCA 90 bp GCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGGACAGAGAGGTaGACCACTGTACACGTCCACGATTATTTCCTTAGGATAGGTTCC +
Preference number: 1 (lower is better)
Translates to: ASRLSCLSYGDRTER*TTVHVHDYFLRIGS
Trigger: GGAACCTATCCTAAGGAAATAATCGTGGACGTGTACAGTGGTTCACCTCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR CCA 90 bp ATTGGTTCCCTGGGCTTAGAGCAGACAGCAAGCCTTTCTTTCACTTaGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCA +
Preference number: 1 (lower is better)
Translates to: IGSLGLEQTASLSFT*PRRHLLFPSNRLGS
Trigger: TGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGCTCTAAGCCCAGGGAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CCA 90 bp AGTAATTTGGAATCCGTTAACACATTTAGCTTATTCTTTCCCCATTaGTTCCCTGGGCTTAGAGCAGACAGCAAGCCTTTCTTTCACTTG +
Preference number: 1 (lower is better)
Translates to: SNLESVNTFSLFFPH*FPGLRADSKPFFHL
Trigger: CAAGTGAAAGAAAGGCTTGCTGTCTGCTCTAAGCCCAGGGAACCAATGGGGAAAGAATAAGCTAAATGTGTTAACGGATTCCAAATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LELRGLRVVLPFPPGELLAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp GCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: AAAPCTPASWSTAAPRDRAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...CCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCGCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSAGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGC...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583173.5
ENST00000679429.1
3UTR-3UTR TCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 2 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGAGCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GAGLARTQQRGDGLAPQVQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...CACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGCGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: GLSVCLPPSHVGREQLWGARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...GCCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 2 (lower is better)
Translates to: LELRGLRVVLPFPPGELLAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp AGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 2 (lower is better)
Translates to: RTQRLSPAQPRWPGAALGAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp TTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: LYSRQLEHRCTSGSA*TSSWNCAASAWCSR
Trigger: ACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp GCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: AASAWCSRSRLESFS*RWFSFWHQDSASVS
Trigger: GGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp ATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: MLGKEICSKFQRRLPAPVPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...CACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 2 (lower is better)
Translates to: PLQQLLVLPPAGAPLHLGLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...CCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp GGCCCTGCTGCAGCCGCCGGAGAACTGACCGTGCTTGTGGGTCCACTCCCTCCTTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: GPAAAAGELTVLVGPLPPSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...AGGAGGGAGTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTGCAGCAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR-3UTR CCA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 2 (lower is better)
Translates to: LELRGLRVVLPFPPGELLRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LELRGLRVVLPFPPGELLMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR TCA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 2 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLTPGVSPLGIGWAGCREARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp CGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGACTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: RCSSSLYSRQLEHRCTSGLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...TCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCCCTGCTGCAGCCGCCGGAGAACTGACCGTGCTTGTGGGTCCACTCCCTCCTCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: GPAAAAGELTVLVGPLPPLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...AGGAGGGAGTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTGCAGCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGGGGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: SSAASGPRRCGRLRGYLGGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CCCCAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 2 (lower is better)
Translates to: WNCAASAWCSRSRLESFSFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTTCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: EGDLLEVPAPLTGSRDSVPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...AACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGCTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 2 (lower is better)
Translates to: GLSVCLPPSHVGREQLWGCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...GCCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 2 (lower is better)
Translates to: PENRQSRSPGASSILCRASRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GVDIFLELRGLRVVLPFPHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...CGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: LELRGLRVVLPFPPGELLLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATATGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: AAEVWDRLIKSTNAHPGICAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...TATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTGACAGGACAGAGCTGTaGGGTGAGAACAGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGDRTEL*GENSGW
Trigger: CCACCCGCTGTTCTCACCCCACAGCTCTGTCCTGTC...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
3UTR-3UTR CCA 90 bp AGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 2 (lower is better)
Translates to: RTQRLSPAQPRWPGAALGCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp CAGGGAGGTGGGCTGGAGGCTGCCAGACTCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: QGGGLEAARLLGCRE*SRALAFLLMDRGLE
Trigger: CTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR TCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CTGGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LESFSLRWFSFWHQDSASTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTGGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 2 (lower is better)
Translates to: LESFSLRWFSFWHQDSASALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 2 (lower is better)
Translates to: GLTPGVSPLGIGWAGCRERLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 2 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp CCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATATGCTGAAGGACCACGGCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: PQTSPTAGHLHQEGV*SAAQRYAEGPRLGS
Trigger: GCTCCCCAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679429.1
3UTR-3UTR TCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 2 (lower is better)
Translates to: VSIRHPGPRPRLASEATGSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: PENRQSRSPGASSILCRAAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp AGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGTCTCCTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: SFSLRWFSFWHQDSASVSSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAGACAGAGCTGTGGGGTaGGAACAGCGGGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: AARLLGCRELSRALAFLLDRAVG*EQRVGH
Trigger: GTGGCCCACCCGCTGTTCTCACCCCACAGCTCTGTC...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
3UTR-3UTR GCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
3UTR-3UTR GCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp AGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGTCTCCAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: SFSLRWFSFWHQDSASVSRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...GGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GATTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 2 (lower is better)
Translates to: DSSAASGPRRCGRLRGYLRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...CAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 2 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAAGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp AGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 2 (lower is better)
Translates to: RELSRALAFLLMDRGLELAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...CAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 2 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp AAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGACCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: KMISKPPDFSNSRAPPSGPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...TCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: GCRELSRALAFLLMDRGLSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...CAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 2 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAALQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLIQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 2 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 2 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTCCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: PRRHLLFPSNRLGSQLVGPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GATTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: DSSAASGPRRCGRLRGYLLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...CAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAEGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTAGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 2 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp CCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATATGCTGAAGGACCACGGCTACAAGGA +
Preference number: 2 (lower is better)
Translates to: PQTSPTAGHLHQEGV*SAAQRYAEGPRLQG
Trigger: TCCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp GGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: GLQGVVQGLGLLINGPRAWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...AGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTATCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: AARLLGCRELSRALAFLLSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCCTCTTTCTCTTGCCATCTCCTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 2 (lower is better)
Translates to: LLINGPRAGAAPLSLAISSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GGAGATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGTCCATTAATAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTACCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: AARLLGCRELSRALAFLLPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: AARLLGCRELSRALAFLLTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR GCA 90 bp AGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATTTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 2 (lower is better)
Translates to: SCRRRCHHDPPGQRSEGHFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...ATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: VILSECGHSVGLVNIKDDEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...ATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAACACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAEHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp AAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGAAGCACAGAGATATGCTaGAGGACCACGGCTACAAGG +
Preference number: 2 (lower is better)
Translates to: KMISKPPDFSNSRAPPSGSTEIC*RTTATR
Trigger: CCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCT...TCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 2 (lower is better)
Translates to: AAEVWDRLIKSTNAHPGIRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...TATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp AGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATTGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 2 (lower is better)
Translates to: SCRRRCHHDPPGQRSEGHWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...ATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp AGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: SLSFTWPRRHLLFPSNRLRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...CAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR-3UTR CCA 90 bp GACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: DRLIKSTNAHPGIGFARVLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...AACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp AGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SLSFTWPRRHLLFPSNRLQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...CAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: PRRHLLFPSNRLGSQLVGASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp AGCGTCGGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAAGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: SVGLVNIKDDFQAPRLLQASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...TTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: LGLQGVVQGLGLLINGPRCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CCA 90 bp GACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 2 (lower is better)
Translates to: DRLIKSTNAHPGIGFARVFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...AACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp GGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: GLVNIKDDFQAPRLLQQPYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...CGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp GTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: VNIKDDFQAPRLLQQPGTLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...GGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR TCA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 2 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp ATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: IKSTNAHPGIGFARVILSGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CGAAAGAATAACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CCA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACGGGATCACAGCTAGTTaGTGGCAAAGCCATCCACAT +
Preference number: 2 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHGITAS*WQSHPH
Trigger: ATGTGGATGGCTTTGCCACCAACTAGCTGTGATCCC...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp CTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LVNIKDDFQAPRLLQQPGIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...GCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CAA 90 bp TCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTaGGGATCACAGCTAGTTGGTGGCAAAGCCATCCACATGCATGTT +
Preference number: 2 (lower is better)
Translates to: SFTWPRRHLLFPSNR*GSQLVGGKAIHMHV
Trigger: AACATGCATGTGGATGGCTTTGCCACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR GCA 90 bp AGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTGGCAAATGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: RHLLFPSNRLGSQLVGGKCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...TTTGCCACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR-3UTR TCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAACTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
3UTR GCA 72 bp GGGGCCCGGCGCTGGCTCCTCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: GARRWLLCTCRR*SSSLYSRQLEH
Trigger: GTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCGGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR TCA 72 bp GCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCGCGGCCTCCGCGTGGT +
Preference number: 3 (lower is better)
Translates to: ASWSTAAPRDRR*HLPGTARPPRG
Trigger: ACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 72 bp TGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTG +
Preference number: 3 (lower is better)
Translates to: CTSGSALTSSWN*AASAWCSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp ACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: TARPPRGAPVPA*RASPCAGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp CACCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCC +
Preference number: 3 (lower is better)
Translates to: HRCTSGSALTSS*NCAASAWCSRS
Trigger: GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp CTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 3 (lower is better)
Translates to: LELRGLRVVLPFPPGELLTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...GAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 72 bp AGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTGCCCCACATCCTGGGG +
Preference number: 3 (lower is better)
Translates to: RQSRSPGASSIL*RAVRSVPHILG
Trigger: CCCCAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 72 bp TTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGC +
Preference number: 3 (lower is better)
Translates to: LTSSWNCAASAW*SRSRLESFSLR
Trigger: GCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp GCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: ALTSSWNCAASA*CSRSRLESFSL
Trigger: CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp TGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: WGLTPGVSPLGIGWAGCRCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...CCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 3 (lower is better)
Translates to: EMVPENRQSRSPGASSILEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR GCA 72 bp AGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTGACATCTTCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: SSSLYSRQLEHR*TSGSALTSSWN
Trigger: GTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp CGCGCAGAAGGGTGTGGCGGCTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCT +
Preference number: 3 (lower is better)
Translates to: RAEGCGGCLKPC*GRRSARSSSAA
Trigger: AGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAGCCGCCACACCCTTCTGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAG +
Preference number: 3 (lower is better)
Translates to: YRLESGYRRQPR*SLRTDSPGPPE
Trigger: CTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR CCA 72 bp TTAAGCTGCCTCTCATACGGGGACAGGACAGAGCTGTaGGGTGAGAACAGCGGGTGGGCCACTGACCCACCT +
Preference number: 3 (lower is better)
Translates to: LSCLSYGDRTEL*GENSGWATDPP
Trigger: AGGTGGGTCAGTGGCCCACCCGCTGTTCTCACCCCACAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
3UTR-3UTR CAA 90 bp ATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 3 (lower is better)
Translates to: MLGKEICSKFQRRLPAPVTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...CACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR GCA 72 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGGACAGAGCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: SSKCCTLASRLS*LSYGDRTELWG
Trigger: ACCCCACAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583818.2
3UTR GCA 72 bp CAGGGAGGTGGGCTGGAGGCTGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTA +
Preference number: 3 (lower is better)
Translates to: QGGGLEAARLLG*RELSRALAFLL
Trigger: TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR CCA 72 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAAC +
Preference number: 3 (lower is better)
Translates to: GPDWPLKLQVRV*VQEAAEMVPEN
Trigger: GTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 3 (lower is better)
Translates to: GLTPGVSPLGIGWAGCREELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp AGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: RLPDSWVAGSCPGPWPSYLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...ATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp TCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: SGHRVCQGYSFGMWPQRRLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp TCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCATCATTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SKMISKPPDFSNSRAPPSLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...TGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp GTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: VWDRLIKSTNAHPGIGFACQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR TCA 72 bp CCATCCCAGTTCATCCATGCCCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGG +
Preference number: 3 (lower is better)
Translates to: PSQFIHALSKVL*FLSCQWPSKMW
Trigger: CCACATCTTCGAGGGCCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAGGGCATGGATGAACTGGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR TCA 72 bp ATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACTTCTCCAACAGCCGGG +
Preference number: 3 (lower is better)
Translates to: MWPQRRPGKHQR*FPSPQTSPTAG
Trigger: CCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR-3UTR CAA 90 bp AAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGAGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 3 (lower is better)
Translates to: KMISKPPDFSNSRAPPSGELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...TCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 3 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
3UTR-3UTR CAA 90 bp GACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 3 (lower is better)
Translates to: DRLIKSTNAHPGIGFARVHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...AACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
3UTR TCA 72 bp TTAAGCTGCCTCTCATACGGGGACAGGACAGAGAGGTaGACCACTGTACACGTCCACGATTATTTCCTTAGG +
Preference number: 3 (lower is better)
Translates to: LSCLSYGDRTER*TTVHVHDYFLR
Trigger: CCTAAGGAAATAATCGTGGACGTGTACAGTGGTTCACCTCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
3UTR CCA 72 bp GAATCCGTTAACACATTTAGCTTATTCTTTCCCCATTaGTTCCCTGGGCTTAGAGCAGACAGCAAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: ESVNTFSLFFPH*FPGLRADSKPF
Trigger: GAAAGGCTTGCTGTCTGCTCTAAGCCCAGGGAACCAATGGGGAAAGAATAAGCTAAATGTGTTAACGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CCA 72 bp CTGAAAAATTATACTGAAAGTCAAATCAAACTGATCTaGCAACCCTATCTAGTTACCTACAATCTACCGTGT +
Preference number: 3 (lower is better)
Translates to: LKNYTESQIKLI*QPYLVTYNLPC
Trigger: ACACGGTAGATTGTAGGTAACTAGATAGGGTTGCCAGATCAGTTTGATTTGACTTTCAGTATAATTTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGGCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRAGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGC...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000583173.5
ENST00000679429.1
CDS-3UTR CCA 90 bp GGAGCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GAGLARTQQRGDGLAPQVEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...CACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRCSSSLYSRQLEHRCTSCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...CGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGAGCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGLARTQQRGDGLAPQVRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...CACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DIFLELRGLRVVLPFPPGKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...TCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GVDIFLELRGLRVVLPFPDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...CGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTCCACCAAGCTGCCCCTaGGCACGCGCCCCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: VDIFLELRGLRVVLPFPPPPSCP*ARAPRE
Trigger: TTCCCGCGGGGCGCGTGCTCAGGGGCAGCTTGGTGG...AGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583173.5
CDS-3UTR GCA 90 bp GCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGCTGGAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AASAWCSRSRLESFSLRWRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...CCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SALTSSWNCAASAWCSRSRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSALTSSWNCAASAWCSRRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...ACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CSSSLYSRQLEHRCTSGSPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...CGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SRSPGASSILCRAVRSVPCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...GGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGAGCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GAGLARTQQRGDGLAPQVALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...CACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SALTSSWNCAASAWCSRSKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LHLGIGVDIFLELRGLRVDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...CACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGAAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RCSSSLYSRQLEHRCTSGRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...TCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACCGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDRQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCACCAGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: APGLSVCLPPSHVGREQLRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSGPCER*GSFCDR
Trigger: GCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAATGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PGTARPPRGAPVPAWRASCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGCCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CSSSLYSRQLEHRCTSGSPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...CGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CAA 72 bp CGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: RQLEHRCTSGSA*TSSWNCAASAW
Trigger: CCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTTCTCGGCGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DLLEVPAPLTGSRDSVLGDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...GCCGAGAACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRSPGASSILCRAVRSVPPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...GGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYSRQLEHRCTSGSALTSAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...AGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GVDIFLELRGLRVVLPFPQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...CGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: PPLQQLLVLPPAGAPLHLCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...GAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGTCTGCAGCCTCGCGCTaGTTAGTCCCCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPSAASR*LVPTAR
Trigger: CCGGGCGGTGGGGACTAAGCAGCGCGAGGCTGCAGA...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CCA 90 bp GACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGACGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DIFLELRGLRVVLPFPPGRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...TCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WNCAASAWCSRSRLESFSHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCACCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACGCGCGCAGAAGGGTGTaGCGGCTGTCGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDARRRV*RLSRAG
Trigger: TCCAGCCCTCGACAGCCGCCACACCCTTCTGCGCGC...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583173.5
CDS-3UTR TCA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SALTSSWNCAASAWCSRSLPALL*EAHGLP
Trigger: TGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAG...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCTGGCCTGGCCAGGACTCAGCAGCGGGGTGACGGGCTGGCCCCACAGGTGAGGACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGLARTQQRGDGLAPQVRTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...CCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HLGIGVDIFLELRGLRVVAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...CACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: RTQRLSPAQPRWPGAALGSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGGGGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSAASGPRRCGRLRGYLGLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...CCCCAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTCGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRARQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLQQLLVLPPAGAPLHLGARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...CCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RTQRLSPAQPRWPGAALGRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCACCAGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: APGLSVCLPPSHVGREQLRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...GAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGAACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCSSSLYSRQLEHRCTSGTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...TCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NCAASAWCSRSRLESFSLTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: HLGIGVDIFLELRGLRVVQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...CACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAARRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGGPCER*GSFCDR
Trigger: GCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCC...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp CTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LHLGIGVDIFLELRGLRVPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...CACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGGCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAEAGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGC...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR CCA 90 bp TTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTGCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LYSRQLEHRCTSGSALTSAGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGC...AGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583173.5
ENST00000679429.1
CDS-3UTR CCA 90 bp CGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGCGGCTGTCGAGGGCTaGAGCTGCTCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RRCSSSLYSRQLEHRCTSAAVEG*SCSSFS
Trigger: AGAGAAAGAGGAGCAGCTCCAGCCCTCGACAGCCGC...CGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583173.5
CDS-3UTR TCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPLPALL*EAHGLP
Trigger: TGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAG...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: PLHLGIGVDIFLELRGLRPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...GCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: PLHLGIGVDIFLELRGLRSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCCAGCCGCCGGAGAACTaGCCGTGCTTGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LVLPPAGAPLHLGIGVDIQPPEN*PCLWVH
Trigger: GTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTG...GATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: WNCAASAWCSRSRLESFSEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCACAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCACCACACAGGCCCTGCTaGAGCCGCCGGAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPPHRPC*SRRRTD
Trigger: GTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGG...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGSALTSSWNCAASAWCSHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...GGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GSALTSSWNCAASAWCSRHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...ACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLQQLLVLPPAGAPLHLRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...GAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SGSALTSSWNCAASAWCSCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...GGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: SRSPGASSILCRAVRSVPARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...GGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: CSSSLYSRQLEHRCTSGSAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...CGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGCCCCGACGCCGGGTCTaGGAGCTCAGCCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWPRRRV*ELSPQV
Trigger: AACCTGCGGGCTGAGCTCCCAGACCCGGCGTCGGGG...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434205.8
3UTR CAA 72 bp GCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCG +
Preference number: 4 (lower is better)
Translates to: AWCSRSRLESFS*RWFSFWHQDSA
Trigger: CGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCACCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGAGCACAGAGATATGCTaGAGGACCACGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NCAASAWCSRSRLESFSLSTEIC*RTTAGE
Trigger: CTCCCCAGCCGTGGTCCTTCAGCATATCTCTGTGCT...CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679429.1
CDS-3UTR TCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCAGCCGCCGGAGAACTaGCCGTGCTTGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELQPPEN*PCLWVH
Trigger: GTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTG...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACCAGCGGGTGGGCCACTaGCCCACCTCCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSKCCTLASRLSCLSYGDQRVGH*PTSSAW
Trigger: CCAGGCTGAGGAGGTGGGTCAGTGGCCCACCCGCTG...GTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR TCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCGACAGAGCTGTGGGGTaGGAACAGCGGGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGDRAVG*EQRVGH
Trigger: GTGGCCCACCCGCTGTTCTCACCCCACAGCTCTGTC...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR GCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: MLGKEICSKFQRRLPAPVPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...CACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCRECSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp GGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GKEICSKFQRRLPAPVTPCSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...CGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTTAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EGDLLEVPAPLTGSRDSVRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...AACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVRQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGCTGGTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: AASAWCSRSRLESFSLRWWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...CCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PGTARPPRGAPVPAWRASPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: NCAASAWCSRSRLESFSLSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IGVDIFLELRGLRVVLPFTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...GAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPERRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVVQGLGLLINGPRAGAARRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTCCACACAGGCCCTGCTaGAGCCGCCGGAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAPHRPC*SRRRTD
Trigger: GTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGG...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAACACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PGTARPPRGAPVPAWRASSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PLQQLLVLPPAGAPLHLGPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...CCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCRECREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GVDIFLELRGLRVVLPFPRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...CGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GKEICSKFQRRLPAPVTPAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...CGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAECTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCATGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSACTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTGCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEAAGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGC...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR CCA 90 bp GAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTTCTGAAGGACCACGGCTaGGGAGCTGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGDLLEVPAPLTGSRDSVLKDHG*GAGLAR
Trigger: CCTGGCCAGGCCAGCTCCCCAGCCGTGGTCCTTCAG...AACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679429.1
3UTR CAA 72 bp GCGCGCAGAAGGGTGTGGCGGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ARRRVWRLSEAM*GKEICSKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCREALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PHILGQREVPEAVEGDVTDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLQQLLVLPPAGAPLHLGHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...CCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTAGCACAGAGATATGCTaGAGGACCACGGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: PGTARPPRGAPVPAWRASSTEIC*RTTATR
Trigger: CCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCT...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAGGCGGGAGGATCATTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPGGRII*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAATGATCCTCCCGCC...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS-3UTR GCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGAAGTCCTTGGGGCCATaGGAGCGCTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRKSLGP*ERWGSF
Trigger: GAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGCGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPERQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATCGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: RLPDSWVAGSCPGPWPSYRQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...ATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGRQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: RTQRLSPAQPRWPGAALGWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: CSSSLYSRQLEHRCTSGSEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...CGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCATCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGASPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AAAPCTPASWSTAAPRDRTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...CCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCATTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGALGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCATTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLHLGIGVDIFLELRGLRWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...GCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSATSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAECTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCATTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTGTCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FLELRGLRVVLPFPPGELVEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGAC...AAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583173.5
CDS-3UTR CCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASGPCER*GSFCDR
Trigger: GCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCC...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAARAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLELRGLRVVLPFPPGELSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...AAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCACCAGGACTCAGCGTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: APGLSVCLPPSHVGREQLRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...GAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRACREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LYSRQLEHRCTSGSALTSARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...AGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FLELRGLRVVLPFPPGELSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...AAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: HPGIGFARVILSECGHSVCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...GACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACCCCACCGCCCGGGCTaGGCAAGGAGGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRPHRPG*ARRAEG
Trigger: CCCTTCTGCCCTCCTTGCCCAGCCCGGGCGGTGGGG...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CCA 90 bp GGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: GKEICSKFQRRLPAPVTPWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...CGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTGGTGAGAACAGCGGGTaGGCCACTGACCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGGENSG*ATDPPP
Trigger: AGGAGGTGGGTCAGTGGCCCACCCGCTGTTCTCACC...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR CCA 90 bp CCGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCACCTCTTCAGGTGGCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PPLQQLLVLPPAGAPLHLTSSGG*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGCCACCTGAAGAGGT...GAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679429.1
CDS-3UTR CCA 90 bp AACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCCCAACCTCTTCAGGTaGCTGGTACTGCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NCAASAWCSRSRLESFSLPNLFR*LVLQEG
Trigger: ACCTTCCTGCAGTACCAGCCACCTGAAGAGGTTGGG...CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679429.1
CDS-3UTR TCA 90 bp CTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGLQGVVQGLGLLINGPRKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...CCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp TCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGGGGACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSAASGPRRCGRLRGYLGTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...CCCCAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGAGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCESRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAESRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RLPDSWVAGSCPGPWPSYPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...ATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAACSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RELSRALAFLLMDRGLELRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...CAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAACGGCAGCCACCAAGCTaGCCAGGCGCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAERQPPS*PGAPRA
Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCG...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTAAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SSKCCTLASRLSCLSYGDRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR GCA 90 bp AACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NCAASAWCSRSRLESFSLLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...CAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGSALTSSWNCAASAWCSASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGCTGGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AASAWCSRSRLESFSLRWCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCERWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCCAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAACGGCGCTGGCTCCTCTaGACCTGCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKRRWLL*TCRRCS
Trigger: GCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCG...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCTCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: PPLQQLLVLPPAGAPLHLSGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...GAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATGCAAATTCCGACTTTaGAGGCCGAAGGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPCKFRL*RPKATR
Trigger: CCGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCA...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR GCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCCACACAGGCCCTGCTaGAGCCGCCGGAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGPHRPC*SRRRTD
Trigger: GTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTTTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPGPCER*GSFCDR
Trigger: GCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCC...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333213.11
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGGPCER*GSFCDR
Trigger: GCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCC...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLELRGLRVVLPFPPGELSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...AAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WNCAASAWCSRSRLESFSFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PPLQQLLVLPPAGAPLHLFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WGLTPGVSPLGIGWAGCRRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...CCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: SALTSSWNCAASAWCSRSPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSKCCTLASRLSCLSYGDPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...GTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTACTGGGGAGGGGAGTCACATTTCTCAGTCTGCCATCTAGTTTAGGACGGCCACCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLGRGVTFLSLPSSLGRPPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...TGGCCGTCCTAAACTAGATGGCAGACTGAGAAATGTGACTCCCCTCCCCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GSALTSSWNCAASAWCSRSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...ACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: LVLPPAGAPLHLGIGVDIGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...GATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTCCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATTGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCGACAGGACAGAGCTGTaGGGTGAGAACAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGDRTEL*GENSGW
Trigger: CCACCCGCTGTTCTCACCCCACAGCTCTGTCCTGTC...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR TCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMLPALL*EAHGLP
Trigger: TGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAG...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGHRVCQGYSFGMWPQRRAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...CCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCAGCACAGAGATATGCTaGAGGACCACGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSSTEIC*RTTAGE
Trigger: CTCCCCAGCCGTGGTCCTTCAGCATATCTCTGTGCT...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR TCA 90 bp GGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: GIGVDIFLELRGLRVVLPKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...CGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAASSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGCAGCCGCCGGAGAACTaGCCGTGCTTGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMQPPEN*PCLWVH
Trigger: GTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTG...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTAAGTCCTTGGGGCCATaGGAGCGCTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LESFSLRWFSFWHQDSASKSLGP*ERWGSF
Trigger: GAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT...AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRPLGLS*RAVGQK
Trigger: TTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGG...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCACTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGALKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRSPGASSILCRAVRSVPLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...GGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCREPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp ATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: IGVDIFLELRGLRVVLPFPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAESPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
CDS-3UTR GCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCGCGGCCTCCGCGTGGTaGTCCCGTTCCCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDIAASAW*SRSRLE
Trigger: CTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCAGCCGGCGTCTGGAGTaGAGTGCGAATGGTCACACT +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILSRRLE*SANGHT
Trigger: AGTGTGACCATTCGCACTGCACTCCAGACGCCGGCT...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR GCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTAGCTCAGCCCGCAGGTTaGTGGAGATGCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVAQPAG*WRCRRP
Trigger: GGGCCTTCTGCATCTCCAGCAACCTGCGGGCTGAGC...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR GCA 90 bp CCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCAATCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PVPRSKLHPLQSCEVSAPIEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGAT...TGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681282.1
CDS-3UTR CCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGACGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVVQGLGLLINGPRAGAARAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp CTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQVLHAGIQVKLPLIRGQHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...CTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CCA 90 bp GTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VDIFLELRGLRVVLPFPPGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...AGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLVLPPAGAPLHLGIGVDSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...GTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGATTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DIFLELRGLRVVLPFPPGFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...TCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: SGSALTSSWNCAASAWCSRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...GGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: SALTSSWNCAASAWCSRSGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVLPPAGAPLHLGIGVDIRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAACCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARVILSECGHSVGLVNIKPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...TTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCCCCGCCCAGCCACGTTaGCCGGGAGCAGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVNIKDDFQAPRLLQQPGPAQPR*PGAALG
Trigger: CCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGG...GCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRARWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSARWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTTGCGCGGCCTCCGCGTaGTGCTCCCGTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DRLIKSTNAHPGIGFARVCAASA*CSRSRL
Trigger: CAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCA...AACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEAALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTGCGTTGACATCTTCCTaGAACTGCGCGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGALTSS*NCAASA
Trigger: CGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGC...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGATGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PHILGQREVPEAVEGDVTCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAACTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCCCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDLPALL*EAHGLP
Trigger: TGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAG...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGACTCAGCAGCGGGGTaGCGGGCTGGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ARVILSECGHSVGLVNIKDSAAG*RAGPTG
Trigger: ACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTC...TTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCTCTCCAGTAAAGCCTaGGGAGCCGGCGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGLSSKA*GAGVWS
Trigger: ACTCCAGACGCCGGCTCCTCAGGCTTTACTGGAGAG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR TCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGCCGCCGGAGAACTaGCCGTGCTTGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRQPPEN*PCLWVH
Trigger: GTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTG...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGAAGTCCTTGGGGCCATaGGAGCGCTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMKSLGP*ERWGSF
Trigger: GAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASCSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPECSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPCSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCTGAAGCCATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SEAMLGKEICSKFQRRLPCSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...CGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSAASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GVDIFLELRGLRVVLPFPCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGASSILCRAVRSVPHILTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEAARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAEWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCTCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: AAEMVPENRQSRSPGASSSGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCGACGAGCGGAGGGTGTaGAAATTCCGACTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILDERRV*KFRLCR
Trigger: CCTGCAAAGTCGGAATTTGCACACCCTCCGCTCGTC...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR GCA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAACCACACAGGCCCTGCTaGAGCCGCCGGAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAEPHRPC*SRRRTD
Trigger: GTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGG...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACACCACACAGGCCCTGCTaGAGCCGCCGGAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTPHRPC*SRRRTD
Trigger: GTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGG...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTTTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGGCTCACTGTGACCTCTaGCTCCCAGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GKEICSKFQRRLPAPVTPAHCDL*LPGSSN
Trigger: ATTGCTTGAACCTGGGAGGCAGAGGTCACAGTGAGC...CGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCREGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: IGVDIFLELRGLRVVLPFGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...GAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGATGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCATGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGACLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAAGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKEQLWG*GAQKGV
Trigger: CACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTC...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: GFARVILSECGHSVGLVNCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAERRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCTAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: LYSRQLEHRCTSGSALTSRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...AGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: PGASSILCRAVRSVPHILRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAELQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGCCTGGGGAGCTGGCCTaGCCAGGACTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VPEAVEGDVTMIHQGKDQPGELA*PGLSSG
Trigger: CCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGG...CTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAAFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCTGCTGCAGCCGCCGGAGAACTGACCGTGCTTGTGGGTCCACTCCCTCCTCAGAAAACAAGGTACTaGGGAGGGGAGTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GPAAAAGELTVLVGPLPPQKTRY*GGESHF
Trigger: GAAATGTGACTCCCCTCCCCAGTACCTTGTTTTCTG...AGGAGGGAGTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTGCAGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GVVQGLGLLINGPRAGAAALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPESSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLASRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAEHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELLSKVL*FLSCQW
Trigger: CCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAG...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPLSKVL*FLSCQW
Trigger: CCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAG...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTCCTTACCTCTCCTaGCTCACCATCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHPPYLS*LTISKP
Trigger: AGGCTTAGAGATGGTGAGTCAGGAGAGGTAAGGAGG...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCAGCACAGAGATATGCTaGAGGACCACGGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPSTEIC*RTTATR
Trigger: CCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCT...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAAAGTCCTTGGGGCCATaGGAGCGCTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AARLLGCRELSRALAFLLKSLGP*ERWGSF
Trigger: GAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACTGCTCTGCCAGCAGCTaGCAGAGCTCTTCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDCSASS*QSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCA...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GQREVPEAVEGDVTMIHQLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...CTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAACTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVNIKDDFQAPRLLQQPGRRSTR*SASSCQ
Trigger: CTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCT...GCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTAGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AAEVWDRLIKSTNAHPGIRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...TATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR GCA 90 bp GATTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSSAASGPRRCGRLRGYLLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...CAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAATEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
CDS-3UTR GCA 90 bp GGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLQGVVQGLGLLINGPRAARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...AGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPERWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GCRELSRALAFLLMDRGLRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...CAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACATGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGATGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKCTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRSPGASSILCRAVRSVPIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...GGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTTTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAESWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAASGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAERWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTTCATGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PSWGLTPGVSPLGIGWAGRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...GCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAAPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTTGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGCTCCCGTTCCCGCCTaGAGAGCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTAPVPA*RASPCA
Trigger: AGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGC...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGACTCCGTTCTCGGCTTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ICSKFQRRLPAPVTPFSAYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...AGCCGAGAACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAARRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCGGGATCACAGCTAGTTaGTGGCAAAGCCATCCACAT +
Preference number: 4 (lower is better)
Translates to: LVLPPAGAPLHLGIGVDIGITAS*WQSHPH
Trigger: ATGTGGATGGCTTTGCCACCAACTAGCTGTGATCCC...GATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGGTTCAGCCTGGGGATCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: LDSWGFSSGHWLGWLQGGSAWGS*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGATCCCCAGGCTGA...ACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR TCA 90 bp CTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCCTCTTTCTCTTGCCATCTCCCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLINGPRAGAAPLSLAISLPALL*EAHGLP
Trigger: TGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAG...GGAGATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGTCCATTAATAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGCCCTTCATGGGGCTTaGCTCCTGGGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HPGIGFARVILSECGHSVALHGA*LLGFLL
Trigger: GAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGC...GACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGGCTTACCGGCTCCCGTaGCTCCGTTCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPEAVEGDVTMIHQGKDQAYRLP*LRSRLC
Trigger: GCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGC...CTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACGGTGTGGCGGCTGTCTaGAGCCATGTTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GFARVILSECGHSVGLVNGVAAV*SHVGEG
Trigger: TCCTTCCCCAACATGGCTTCAGACAGCCGCCACACC...GTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTTGAGCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: HQGKDQRDIPTLVRQPLEPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...CTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAEKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: PENRQSRSPGASSILCRAKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAGCCGAGATGGTCCCTaGGAACAGACAGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: HRVCQGYSFGMWPQRRPGSRDGP*EQTVPV
Trigger: GACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCT...ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGGAGAGCTTCTCCTTGCGCTGGTTCAGCTTCTGGCACCAGGACTCAGCGTCTGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LESFSLRWFSFWHQDSASAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: EMVPENRQSRSPGASSILLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATCAGCCGCCGGAGAACTaGCCGTGCTTGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RQPLEAAEVWDRLIKSTNQPPEN*PCLWVH
Trigger: GTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTG...ATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTAGCACAGAGATATGCTaGAGGACCACGGCATCTCTA +
Preference number: 4 (lower is better)
Translates to: PRSKLHPLQSCEVSAPHPSTEIC*RTTASL
Trigger: TAGAGATGCCGTGGTCCTTCAGCATATCTCTGTGCT...AGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545228.3
CDS-3UTR TCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCGGACCACGGCTCTCCTaGCTCACCATCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGGPRLS*LTISKP
Trigger: AGGCTTAGAGATGGTGAGTCAGGAGAGCCGTGGTCC...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679782.1
CDS-3UTR GCA 90 bp CTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCCTCTTTCTCTTGCCATCTCCCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLINGPRAGAAPLSLAISLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...GGAGATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGTCCATTAATAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp AGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: RELSRALAFLLMDRGLELEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...CAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCTCTCCATCCTCCAAGTaGTGCACGCTGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPSPSSK*CTLASR
Trigger: CCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGA...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGGAGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLTPGVSPLGIGWAGCRECSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGTCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: SLRTDSPGPPEQAPSSAESGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...CTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCTCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSSGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCATCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSASGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTTCCCTGGGCTTAGAGCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WFPGLRADSKPFFHLAKKRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...CTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGCTCTAAGCCCAGGGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GQREVPEAVEGDVTMIHQHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...CTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGHEALF*PPLGSH
Trigger: GTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTG...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: GPDWPLKLQVRVWVQEAASWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...GGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEASGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLIRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLARKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PSSKCCTLASRLSCLSYGPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATGCAGGGAGGTGGGCTaGAGGCTGCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKCREVG*RLPDSW
Trigger: CCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCA...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCCCTCTGGGCATTGGCTaGGCTGGCTGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ADSKPFFHLAKKAPPFPIPLGIG*AGCREV
Trigger: CACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGG...GATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCATGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSACLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCGCGCGCAGAAGGGTGTaGCGGCTGTCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: VWDRLIKSTNAHPGIGFAARRRV*RLSEAM
Trigger: CATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGC...GGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACTGTACTCCCGCCAGCTaGAGCACCGCTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHCTPAS*STAAPR
Trigger: CCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACA...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGCTGAAGGACCACGGCTaGGGAGCTGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQLKDHG*GAGLAR
Trigger: CCTGGCCAGGCCAGCTCCCCAGCCGTGGTCCTTCAG...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR CCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: SGHRVCQGYSFGMWPQRRGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGGCTCCCGTGTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: MLGKEICSKFQRRLPAPVFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...CACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGATGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGATGGCCCTCGAAGATGTaGCAGGCTGAGGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRWPSKM*QAEGVP
Trigger: AGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCA...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GATTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGGGGATCACAGCTAGTTaGTGGCAAAGCCATCCACAT +
Preference number: 4 (lower is better)
Translates to: DSSAASGPRRCGRLRGYLGITAS*WQSHPH
Trigger: ATGTGGATGGCTTTGCCACCAACTAGCTGTGATCCC...CAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CAA 72 bp GCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARLLGCRELSRA*AFLLMDRGLEL
Trigger: CAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVVQGLGLLINGPRAGAATSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR TCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATATCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: AAEVWDRLIKSTNAHPGISSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...TATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCAGCACAGAGATATGCTaGAGGACCACGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLASTEIC*RTTALL
Trigger: CAGGAGAGCCGTGGTCCTTCAGCATATCTCTGTGCT...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679782.1
CDS-3UTR GCA 90 bp AGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATAAGTCCTTGGGGCCATaGGAGCGCTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RQPLEAAEVWDRLIKSTNKSLGP*ERWGSF
Trigger: GAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT...ATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQLHALL*QQLPEL
Trigger: GAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAG...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333213.11
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGGACAGAGAGTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: LHAGIQVKLPLIRGQDREWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...CTCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS-3UTR GCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: AARLLGCRELSRALAFLLEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp AGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SCRRRCHHDPPGQRSEGHRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...ATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GVVQGLGLLINGPRAGAAASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PGASSILCRAVRSVPHILCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
CDS-3UTR GCA 90 bp TCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SILQVLHAGIQVKLPLIRTEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...CCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR GCA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCGCCAGACTCTTGGGTTaGAGGGAGTTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGARLLG*RELSRA
Trigger: GGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGATTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCTGCACCTGCCGCCGCTaGAGCAGCTCCTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDICTCRR*SSSLYS
Trigger: GGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCA...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLPDSWVAGSCPGPWPSYASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...ATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTGCTCACTGTGACCTCTaGCTCCCAGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEAAHCDL*LPGSSN
Trigger: ATTGCTTGAACCTGGGAGGCAGAGGTCACAGTGAGC...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCRRRCHHDPPGQRSEGHRAESP*GHASAG
Trigger: CCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCG...ATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGCCCAACCTCTTCAGGTaGCTGAAGACCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEPNLFR*LKTWYC
Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGG...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCCGCTGGTTCAGCTTCTaGCACCAGGACTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HPGIGFARVILSECGHSVRWFSF*HQDSAS
Trigger: AGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCG...GACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTGAAGCCATGTTGGGGAAGGAGATCTGCTCGAAGTTCCAGCGCCGCTTACCGCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SEAMLGKEICSKFQRRLPLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...CGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTATTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFARVILSECGHSVGLVNTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...GTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: PGASSILCRAVRSVPHILGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: NRQSRSPGASSILCRAVRGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCATCAGGAGCCCAGACTGGCCTCTaGAGCTACAGGTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KMISKPPDFSNSRAPPSGAQTGL*SYRLES
Trigger: AGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGC...TCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLIHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VSIRHPGPRPRLASEATGLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HSVSIRHPGPRPRLASEALKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LQVLHAGIQVKLPLIRGQLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...CTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS-3UTR TCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLALSKVL*FLSCQW
Trigger: CCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAG...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR GCA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GQREVPEAVEGDVTMIHQEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...CTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTTGAGGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: HQGKDQRDIPTLVRQPLEASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...CTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTTGAGACCGAGGGCTGGAGCTaGTCCTCTTTCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HQGKDQRDIPTLVRQPLETEGWS*SSFSCH
Trigger: ATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGT...CTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
CDS-3UTR GCA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILGQREVPEAVEGDVTMIRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACATGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGATGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTTGGAGAGCTTCTCCTTaGGCTGGTTCAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTWRASP*AGSASG
Trigger: GCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCA...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGCGTCGGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAAACATCTTCCTGGAACTaGGCGGCCTCCGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVGLVNIKDDFQAPRLLQTSSWN*AASAWC
Trigger: GCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGT...TTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGCAGGTTGCTGGAGATaGAGAAGGCCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRAGCWR*RRPLFC
Trigger: GCAAAAGAGGGGCCTTCTGCATCTCCAGCAACCTGC...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CCA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGAAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSKCCTLASRLSCLSYGDFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAAAGGAAGGTCACAGTGTaGTCGGTCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKRKVTV*SVSSSW
Trigger: CCAGCTGCTGCTGACCGACCACACTGTGACCTTCCT...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: PHILGQREVPEAVEGDVTGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGAATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGAGCTTCTCCTTGCGCTaGTTCAGCTTCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LGLQGVVQGLGLLINGPRSFSLR*FSFWHQ
Trigger: CTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCT...CCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PHILGQREVPEAVEGDVTYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SGHRVCQGYSFGMWPQRRYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...CCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VTVSLCEYQTPRAKAQTGYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...GCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGTCCTCTCTTCTGCCCAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: IARSRHPLVKGTQSSLLPRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...GGGCAGAAGAGAGGACTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACCTACAGGTTAGAGTCTaGGTACAGGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDLQVRV*VQEAAE
Trigger: CTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTTTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLIFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAAACCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKTSSGG*RPGTAG
Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGT...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGCCTCGGGATCGGCGTTaGCATCTTCCTGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQPRDRR*HLPGTA
Trigger: CGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGG...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RWSLRTDSPGPPEQAPSSGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...AGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLIKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR TCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKLSKVL*FLSCQW
Trigger: CCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAG...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTACCTCCTTACCTCTCCTaGCTCACCATCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: AARLLGCRELSRALAFLLPPYLS*LTISKP
Trigger: AGGCTTAGAGATGGTGAGTCAGGAGAGGTAAGGAGG...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS-3UTR TCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGAGCACAGAGATATGCTaGAGGACCACGGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRSTEIC*RTTATR
Trigger: CCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCT...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: ADSKPFFHLAKKAPPFPIEKPMV*QNLPAG
Trigger: TCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTC...GATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTGGCAAAAGGTGGGCTGGAGGCTaGCAGACTCTTGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RHLLFPSNRLGSQLVGGKRWAGG*QTLGLQ
Trigger: CTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCT...TTTGCCACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTTTGGGGAAGGAGATCTaGTCGAAGTTCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: DRLIKSTNAHPGIGFARVLGKEI*SKFQRR
Trigger: GCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAA...AACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGATCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRSGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGTCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGLQGVVQGLGLLINGPRSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...CCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGAAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGAGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGACAGGACAGAGCTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRGQDRA*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCC...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VWDRLIKSTNAHPGIGFARLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GCRELSRALAFLLMDRGLCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...CAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCCTGAAGGACCACGGCTaGGGAGCTGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGLKDHG*GAGLAR
Trigger: CCTGGCCAGGCCAGCTCCCCAGCCGTGGTCCTTCAG...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR CCA 90 bp AGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTGGCAAACAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RHLLFPSNRLGSQLVGGKQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...TTTGCCACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCGGCCAAGGCCCAGACTaGCCTCTGAAGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDIGQGPD*PLKLQV
Trigger: AACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCC...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACATTCTGCCCCACCTCCTaGGTCCTTAAAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTFCPTS*VLKIES
Trigger: GGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAA...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGAACCCCATCTGTACTTaGTTGGAATCGTCGAACCAC +
Preference number: 4 (lower is better)
Translates to: PSSKCCTLASRLSCLSYGNPICT*LESSNH
Trigger: GTGGTTCGACGATTCCAACCAAGTACAGATGGGGTT...CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS-3UTR TCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKKASSG*RRCRPC
Trigger: GCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTT...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR TCA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATGGTCTGCCAGAATTTaGCCGCGGGAGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKWSARI*PRETST
Trigger: AGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCA...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCAGGCGCTGCCGGCCCTaGTCTGAGAAGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGRRCRP*SEKPMV
Trigger: GACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ACTCTGGTAAGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAACTGAAGACCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLVRQPLEAAEVWDRLIKLKTWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAG...TTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ILGQREVPEAVEGDVTMIASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ADSKPFFHLAKKAPPFPIASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...GATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGATGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVRCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTTGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QFHSVSIRHPGPRPRLASCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...AGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAATCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAESGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCGGTGGAAGAGGTGGATaGAGCCACACTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSGGRGG*SHTPED
Trigger: ATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACC...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVNIKDDFQAPRLLQQPGSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...GCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: YRLESGYRRQPRWSLRTDFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTATTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AARLLGCRELSRALAFLLFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...TAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CCA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACAGGCTGCCAGACTCTTaGGTTGCAGGGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHRLPDS*VAGSCP
Trigger: TGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCATGGGGCTTGACTCCTaGGGTTTCTCCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VNIKDDFQAPRLLQQPGTMGLDS*GFSSGH
Trigger: ATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCAT...GGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCAGGAGGCAGCCGAGATaGTCCCTGAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: ADSKPFFHLAKKAPPFPIRRQPR*SLRTDS
Trigger: ACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT...GATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
3UTR CAA 72 bp TGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTaGGGATCACAGCTAGTTGGTGGCAAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: WPRRHLLFPSNR*GSQLVGGKAIH
Trigger: GTGGATGGCTTTGCCACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGAAGGAGATGTCACCATaGTCCACCAGGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: LEAAEVWDRLIKSTNAHPKEMSP*STRAKI
Trigger: GATCTTTGCCCTGGTGGATCATGGTGACATCTCCTT...CGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACAGTTTCACTCTGTaGGTATCAGACACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILGQREVPEAVEGDVTMIHSFTL*VSDTQG
Trigger: GCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTG...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCTTTCCAAAGTCCTGTaGTTCCTCAGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ILGQREVPEAVEGDVTMILSKVL*FLSCQW
Trigger: CCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAG...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PRRHLLFPSNRLGSQLVGASRLS*LSYGDR
Trigger: CCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC...ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp AATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCACACAGCCATCCTCCAAGTGCTaGACGCTGGCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NGFGFIARSRHPLVKGTQPSSKC*TLASRL
Trigger: TAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG...CTGTGTGCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGATGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTCGGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGGCAAGCTCCATCCTCTaGAGAGCTGTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VGLVNIKDDFQAPRLLQQASSIL*RAVRSV
Trigger: CACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGC...CTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCTTCCCACACAGGCCCTaGTGCAGCCGCCGGAGAACT +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGFPHRP*CSRRRT
Trigger: AGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAA...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCTATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ILGQREVPEAVEGDVTMIYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCCAGCCCGCAGGTTGCTaGAGATGCAGAAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGQPAGC*RCRRPL
Trigger: GAGGGGCCTTCTGCATCTCCAGCAACCTGCGGGCTG...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CCA 90 bp TCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGTTATTCTTTCCCCATTaGTTCCCTGGGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGHRVCQGYSFGMWPQRRLFFPH*FPGLRA
Trigger: TGCTCTAAGCCCAGGGAACCAATGGGGAAAGAATAA...CCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCTTATTCTTTCCCCATTaGTTCCCTGGGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PHILGQREVPEAVEGDVTLFFPH*FPGLRA
Trigger: TGCTCTAAGCCCAGGGAACCAATGGGGAAAGAATAA...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACTTGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTACAGCACATCGAGGGCTaGAGCTGCTCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TWPRRHLLFPSNRLGSQLQHIEG*SCSSFS
Trigger: AGAGAAAGAGGAGCAGCTCCAGCCCTCGATGTGCTG...TAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681282.1
CDS-3UTR TCA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGAGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCTCCTCTGCAGAGCTGTaGGGTCAGTGCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGSSAEL*GQCPTS
Trigger: GGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGA...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDILKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAACAGCTGGAGCACCGCTaGACCTCGGGATCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKQLEHR*TSGSAL
Trigger: CAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTG...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR GCA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCTCCGGGCATAGGGTTTaGCAGGGTTATTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDISGHRV*QGYSFG
Trigger: TCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGA...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ACTTGGCCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTATCTTGGTGGAAGAGGTaGATGGAGCCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TWPRRHLLFPSNRLGSQLSWWKR*MEPHSR
Trigger: TCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGA...TAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGGCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTTCCTGGATAGACAGTaGCAGGTCTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VNIKDDFQAPRLLQQPGTFLDRQ*QVLVEE
Trigger: CTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAA...GGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CCAAGAAGGCACCTCCTTTTCCCATCTAACAGGTTGGGATCACAGCTAGTTGGTAGGTGGCTGAAGACCTaGTACTGCAGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PRRHLLFPSNRLGSQLVGRWLKT*YCRKVT
Trigger: TGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCT...ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAAAAGGAGGTGCCTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCCAGTGCCCCACATCCTaGGGCAACGTGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGQCPTS*GNVKSL
Trigger: CAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTG...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VILSECGHSVGLVNIKDDFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...ATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCAGCACAGAGATATGCTaGAGGACCACGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGSTEIC*RTTAGE
Trigger: CTCCCCAGCCGTGGTCCTTCAGCATATCTCTGTGCT...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR GCA 90 bp GCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAATGCTCCTCTTTCTCTTaGCATCTCCATCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ARVILSECGHSVGLVNIKCSSFS*HLHPPS
Trigger: ACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCA...TTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp GTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATTCAGGTGGCTGGTACTaGAGGAAGGTCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VILSECGHSVGLVNIKDDSGGWY*RKVTVW
Trigger: CCACACTGTGACCTTCCTGCAGTACCAGCCACCTGA...ATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679429.1
CDS-3UTR CCA 90 bp GTCGGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGTGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VGLVNIKDDFQAPRLLQQCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...CTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp CTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATTTCCAATATTCTTTCGGAATGTaGCCACAGCGTCGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LSECGHSVGLVNIKDDFQYSFGM*PQRRPG
Trigger: ACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATA...TTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp GCAGACAGCAAGCCTTTCTTTCACTTGGCCAAGAAGGCACCTCCTTTTCCCATCCAGAAAACAAGGTACTaGGGAGGGGAGTCACATTTC +
Preference number: 4 (lower is better)
Translates to: ADSKPFFHLAKKAPPFPIQKTRY*GGESHF
Trigger: GAAATGTGACTCCCCTCCCCAGTACCTTGTTTTCTG...GATGGGAAAAGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTTGCTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp AGACAACCGCTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RQPLEAAEVWDRLIKSTNGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...ATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGAATGGTCACACTTGTaGCCGCCCCTCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKEWSHL*PPLCSL
Trigger: GAGGCTGCAGAGGGGCGGTCACAAGTGTGACCATTC...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CCA 90 bp ATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGCAGTGGCAGGTCTTGGTaGAAGAGGTGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IFNGFGFIARSRHPLVKGSGRSW*KRWMEP
Trigger: TGGCTCCATCCACCTCTTCCACCAAGACCTGCCACT...GCCTTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp AATCCGTTAACACATTTAGCTTATTCTTTCCCCATTGGTTCCCTGGGCTTAGAGTTCCTCAGCTGCCAGTaGCCCTCGAAGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NPLTHLAYSFPIGSLGLEFLSCQ*PSKMWQ
Trigger: CTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAA...CTCTAAGCCCAGGGAACCAATGGGGAAAGAATAAGCTAAATGTGTTAACGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp ATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGCTTAAAATCGAGTCCTaGGTTCCAGAGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: IKSTNAHPGIGFARVILSLKIES*VPEGSL
Trigger: CAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAG...CGAAAGAATAACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR TCA 90 bp CTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATTTCCAAGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LSECGHSVGLVNIKDDFQGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...TTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR GCA 90 bp ATCAAATCCACTAATGCACATCCGGGCATAGGGTTTGCCAGGGTTATTCTTTCGATCCCAGTTCATCCATaGCCTTTCCAAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IKSTNAHPGIGFARVILSIPVHP*PFQSPV
Trigger: CACAGGACTTTGGAAAGGGCATGGATGAACTGGGAT...CGAAAGAATAACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAATGTCTGAAGCCATGTTaGGGAAGGAGATCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKCLKPC*GRRSAR
Trigger: TCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACA...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS-3UTR TCA 90 bp TCTATTTTTAATGGCTTTGGCTTTATAGCACGAAGCAGGCACCCTCTCGTTAAAGGTAAACATCAAAGATaGTTTCCAAGCCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SIFNGFGFIARSRHPLVKGKHQR*FPSPQT
Trigger: AGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACC...TTTAACGAGAGGGTGCCTGCTTCGTGCTATAAAGCCAAAGCCATTAAAAATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000679429.1
CDS GCA 90 bp TCGGGCAGAAAGTCCTTGGGGCCATGCGAGCGCTGGGGCAGCTTCTaGGACCGCGAGCGGGCGGCGAAGAGCTCCCGGGCGCCCGACGCC +
Preference number: 5 (lower is better)
Translates to: SGRKSLGPCERWGSF*DRERAAKSSRAPDA
Trigger: GGCGTCGGGCGCCCGGGAGCTCTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679370.1
CDS CCA 90 bp GCTGCCGAGCCGTCGGGCAGAAAGTCCTTGGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGCGAGCGGGCGGCGAAGAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: AAEPSGRKSLGPCER*GSFCDRERAAKSSR
Trigger: CCGGGAGCTCTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp GCAGCCGCTCGGCCTGAGCTGCCGAGCCGTCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGGGCAGCTTCTGCGACCGCGAGCGGG +
Preference number: 5 (lower is better)
Translates to: AAARPELPSRRAESP*GHASAGAASATASG
Trigger: CCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp GTCTGTCTCCCGCCCAGCCACGTTGGCCGGGAGCAGCTCTGGGGCTaGGGCGCGCAGAAGGGTGTGGCGGCTGTCGAGGGCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VCLPPSHVGREQLWG*GAQKGVAAVEGWSC
Trigger: GCAGCTCCAGCCCTCGACAGCCGCCACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583173.5
CDS GCA 90 bp TCGGGCAGAAAGTCCTTGGGGCCATGCGAGCGCTGGGGCAGCTTCTaGGACCGCGAGCGGGCGGCGAAGAGCTCCCGGGCGCTGAGCACG +
Preference number: 5 (lower is better)
Translates to: SGRKSLGPCERWGSF*DRERAAKSSRALST
Trigger: CGTGCTCAGCGCCCGGGAGCTCTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 90 bp CTGCCAGAGCTCTTCCCGGCACCGGCGCAGCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAAGTCCTTGGGGCCATGCGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LPELFPAPAQPLGLS*RAVGQKVLGAMRAL
Trigger: CAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGCGCCGGTGCCGGGAAGAGCTCTGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS TCA 90 bp AGCAGCTGCCAGAGCTCTTCCCGGCACCGGCGCAGCCGCTCGGCCTaGGCTGCCGAGCCGTCGGGCAGAAAGTCCTTGGGGCCATGCGAG +
Preference number: 5 (lower is better)
Translates to: SSCQSSSRHRRSRSA*AAEPSGRKSLGPCE
Trigger: CTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGCGCCGGTGCCGGGAAGAGCTCTGGCAGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp GGAGGTTCGCCATTCCTTCGGTGTCTTCCGTCCGGTCCCTACGGCTaGGCTCCGAAGCCAGGTTTCGAGGGCCGGGGGCGGGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GGSPFLRCLPSGPYG*APKPGFEGRGREAL
Trigger: CAGCGCCTCCCGCCCCCGGCCCTCGAAACCTGGCTTCGGAGCCCAGCCGTAGGGACCGGACGGAAGACACCGAAGGAATGGCGAACCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679370.1
CDS CCA 90 bp CCCGCCGCTCACCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGAGGCGCTCCACGCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PAAHRGRLQLHEALF*PPLGSHQEALHALL
Trigger: GAGCAGCGCGTGGAGCGCCTCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGTGAGCGGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578415.1
CDS-3UTR CAA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTTCGGGCAGAAAGTCCTaGGGGCCATGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: PGTARPPRGAPVPAWRASSGRKS*GPCERW
Trigger: CCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS TCA 90 bp CCTGAGGAGCCGGCGTCTGGAGTGCAGTGCGAATGGTCACACTTGTaGCCGCCCCTCTGCAGCCTCGCGCTGCTTAGTCCCCACCGCCCG +
Preference number: 5 (lower is better)
Translates to: PEEPASGVQCEWSHL*PPLCSLALLSPHRP
Trigger: CGGGCGGTGGGGACTAAGCAGCGCGAGGCTGCAGAGGGGCGGTCACAAGTGTGACCATTCGCACTGCACTCCAGACGCCGGCTCCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS-3UTR CAA 90 bp CCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGTARPPRGAPVPAWRASLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...AGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CSSSLYSRQLEHRCTSGSRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...CGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp CCAGAATTTGCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCAGGCGCTCCACGCG +
Preference number: 5 (lower is better)
Translates to: PEFARGRLQLHEALF*PPLGSHQAAQALHA
Trigger: CGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGCAAATTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp CCAGAATTTGCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCCTGAGCACGCGCCC +
Preference number: 5 (lower is better)
Translates to: PEFARGRLQLHEALF*PPLGSHQAAPEHAP
Trigger: GGGCGCGTGCTCAGGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGCAAATTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579449.2
ENST00000583173.5
CDS-3UTR CAA 90 bp CCGCTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLHLGIGVDIFLELRGLRCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RRCSSSLYSRQLEHRCTSLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCGGCGTTGACATCCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LVLPPAGAPLHLGIGVDIRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...GATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCAGCCCGCAGGTaGCTGGAGATGCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QEAAEMVPENRQSRSPGASSARR*LEMQKA
Trigger: GGCCTTCTGCATCTCCAGCAACCTGCGGGCTGAGCT...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS GCA 90 bp AAGGGCTCAGGGAAGGACGAGCGGAGGGTGTGCAAATTCCGACTTTaGAGGCCGAAGGCCACCCGGGAACTGTCAGGAGCGGTCCGGGGA +
Preference number: 5 (lower is better)
Translates to: KGSGKDERRVCKFRL*RPKATRELSGAVRG
Trigger: TCCCCGGACCGCTCCTGACAGTTCCCGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCACACCCTCCGCTCGTCCTTCCCTGAGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS CCA 90 bp CCAGAATTTGCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCCTGGCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PEFARGRLQLHEALF*PPLGSHQAAPGEEW
Trigger: CCACTCCTCGCCAGGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGCAAATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583454.1
ENST00000583634.1
CDS-3UTR CAA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SALTSSWNCAASAWCSRSLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SGSALTSSWNCAASAWCSGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...GGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCACGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WSLRTDSPGPPEQAPSSARCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...TGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTTCGGGCAGAAAGTCCTaGGGGCCATGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: ESGYRRQPRWSLRTDSPGSGRKS*GPCERW
Trigger: CCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA...ACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTGGAGAGCTTCTCCTTGCGCTGGCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: AASAWCSRSRLESFSLRWQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...CCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HLGIGVDIFLELRGLRVVLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: GSALTSSWNCAASAWCSRTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...ACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS CCA 90 bp GCATCCAGGTTAAGCTGCCTCTCATACGGGGACAGGACAGAGCTGTaGGGTGAGAACAGCGGGTGGGCCACTGACCCACCTCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: ASRLSCLSYGDRTEL*GENSGWATDPPPQP
Trigger: AGGCTGAGGAGGTGGGTCAGTGGCCCACCCGCTGTTCTCACCCCACAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR CAA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: AAEMVPENRQSRSPGASSRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: HLGIGVDIFLELRGLRVVRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...CACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGCACCTCGGGATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: LHLGIGVDIFLELRGLRVRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...CACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: AAEMVPENRQSRSPGASSGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...GGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SALTSSWNCAASAWCSRSLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...GGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HSVSIRHPGPRPRLASEARCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VSIRHPGPRPRLASEATGRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCGTGCAAATTCCGACTTaGCAGGCCGAAGGCCACCCG +
Preference number: 5 (lower is better)
Translates to: SGYRRQPRWSLRTDSPGPVQIPT*QAEGHP
Trigger: CGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCAC...GGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CAA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTTCGGGCAGAAAGTCCTaGGGGCCATGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPSGRKS*GPCERW
Trigger: CCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGTCGGGCAGAAAGTCCTaGGGGCCATGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RELSRALAFLLMDRGLELSGRKS*GPCERW
Trigger: CCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA...CAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTCGGGCAGAAAGTCCTaGGGGCCATGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLSGRKS*GPCERW
Trigger: CCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGA...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TGGGGCTTGACTCCTGGGGTTTCTCCTCTGGGCATTGGCTGGGCTGGCTGCAGGAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: WGLTPGVSPLGIGWAGCRRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...CCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: IGVDIFLELRGLRVVLPFGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...GAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: DTQGQGPDWPLKLQVRVWLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...CCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAACTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: RRQPRWSLRTDSPGPPEQLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...TTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCELESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PGASSILCRAVRSVPHILLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GATTCCTCAGCTGCCAGTGGCCCTCGAAGATGTGGCAGGCTGAGGGGGTACCTGACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: DSSAASGPRRCGRLRGYLTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...CAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: EMVPENRQSRSPGASSILTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPERCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CGCCGCTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGCCCATCTGTACTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: RRCSSSLYSRQLEHRCTSPICTW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGTACAGATGGG...CGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS TCA 90 bp AAGATACAAGGCCTCTTCCGGGTGAAGGCGCTGCCGGCCCTGCTCTaGGAAGCCCATGGTCTGCCAGAATTTGCCCGCGGGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: KIQGLFRVKALPALL*EAHGLPEFARGRLQ
Trigger: TTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTTGTATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000579449.2
ENST00000580013.6
ENST00000583173.5
ENST00000583454.1
ENST00000583634.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: VPRSKLHPLQSCEVSAPHRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...ATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGTCAGTGCCCCACATCCTGAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: PGASSILCRAVRSVPHILRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...CAGGATGTGGGGCACTGACCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGCAGCAGCTCCTTGTACTCCCGCCAGCTGGAGCACCGCTGCACCTCGGGATCCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: LQQLLVLPPAGAPLHLGIQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...GATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583173.5
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: EMVPENRQSRSPGASSILGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: QEAAEMVPENRQSRSPGAELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...TGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: GYRRQPRWSLRTDSPGPPELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...CGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VSIRHPGPRPRLASEATGLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PSSKCCTLASRLSCLSYGGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...CCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CAA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: NRQSRSPGASSILCRAVRLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGCAGAAGGCCCCTCTTTaGCCCCTAGCCCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRQKAPL*PLALLG
Trigger: CCCGAGGAGGGCTAGGGGCAAAAGAGGGGCCTTCTG...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434205.8
CDS-3UTR CAA 90 bp CAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCAGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: QPRWSLRTDSPGPPEQAPELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...TGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GCQTLGLQGVVQGLGLLILGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...AATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TTGCCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LPSPSSKCCTLASRLSCLEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp GTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: VSDTQGQGPDWPLKLQVREAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...TCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SQFHSVSIRHPGPRPRLAGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...GGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: HSVSIRHPGPRPRLASEATSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCCGCTGCAGCAGCTCCTaGTACTCCCGCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGRCSSS*YSRQLE
Trigger: CTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCG...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ATCGGCGTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCAAGCCTTTCTTTCACTaGGCCAAGAAGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: IGVDIFLELRGLRVVLPFKPFFH*AKKAPP
Trigger: AGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTT...GAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTTATAGTGGCGTGATCTaGGCTCACTGTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: PENRQSRSPGASSILCRAYSGVI*AHCDLC
Trigger: GCAGAGGTCACAGTGAGCCAAGATCACGCCACTATA...AGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTTGACATCTTCCTGGAACTGCGCGGCCTCCGCGTGGTGCTCCCGTTCCCGCCTAAACCCCATCTGTACTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: VDIFLELRGLRVVLPFPPKPHLY*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGTACAGATGGGGTTT...AGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679928.1
CDS TCA 90 bp CCAGGAAGCAGCCTCACAGAGGTGCCACTTGAGGGTTGGGGGCTCTaGACCCTTGGGCTAACCCACTGGTTATTCTCCCTCTTCCCTAGA +
Preference number: 5 (lower is better)
Translates to: PGSSLTEVPLEGWGL*TLGLTHWLFSLFPR
Trigger: TCTAGGGAAGAGGGAGAATAACCAGTGGGTTAGCCCAAGGGTTCAGAGCCCCCAACCCTCAAGTGGCACCTCTGTGAGGCTGCTTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS-3UTR CAA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: HSVSIRHPGPRPRLASEARQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: HSVSIRHPGPRPRLASEAGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...AGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: EMVPENRQSRSPGASSILELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...GAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: VWVQEAAEMVPENRQSRSELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...GGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGATGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LQVRVWVQEAAEMVPENRCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...TCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGAGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPREAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GFARVILSECGHSVGLVNEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGGGTCACTGCAAGGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PPPGSLKSSPEFQRGHCKGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...CTTGCAGTGACCCCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGAGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPETSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CCCCACATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: PHILGQREVPEAVEGDVTTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...GGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCGGTCCCCCCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: WVQEAAEMVPENRQSRSPHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...GGGGGACCGGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGAAGCCTTTCTTTCACTaGGCCAAGAAGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: NRQSRSPGASSILCRAVRKPFFH*AKKAPP
Trigger: AGGAGGTGCCTTCTTGGCCAAGTGAAAGAAAGGCTT...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS GCA 90 bp CCATCTCCATCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGGACAGAGCTTGGTTGGAATCGTCGA +
Preference number: 5 (lower is better)
Translates to: PSPSSKCCTLASRLS*LSYGDRTELGWNRR
Trigger: TCGACGATTCCAACCAAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000578415.1
ENST00000579449.2
ENST00000580013.6
ENST00000583173.5
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 90 bp CCTAACCACCAACTCCTGGCGGTCAAGGTACTGCAGAGACGGCACTaGTTGGAAACTTACCGGGCACCTCCATCAGGAAGGTGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: PNHQLLAVKVLQRRH*LETYRAPPSGRCVV
Trigger: GACAACACACCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTGGTGGTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS GCA 90 bp TTCAGGAGCCAGTTCCTAACCACCAACTCCTGGCGGTCAAGGTACTaGAGAGACGGCACTGCTTGGAAACTTACCGGGCACCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: FRSQFLTTNSWRSRY*RDGTAWKLTGHLHQ
Trigger: CTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTGGTGGTTAGGAACTGGCTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CCA 90 bp ACCACCAACTCCTGGCGGTCAAGGTACTGCAGAGACGGCACTGCTTaGAAACTTACCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: TTNSWRSRYCRDGTA*KLTGHLHQEGVLSA
Trigger: TGCAGACAACACACCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CCA 90 bp CTCCCCCTCTCAGCAGCGCATCAAGAATGTGGCCAACCAGGAAAGTaGGGCAGCATCACTAATGTGGACTGGAATCCCTGCTCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LPLSAAHQECGQPGK*GSITNVDWNPCSLQ
Trigger: TTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTCCTGGTTGGCCACATTCTTGATGCGCTGCTGAGAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS-3UTR CAA 90 bp CCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: PLKLQVRVWVQEAAEMVPGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...AGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: LKLQVRVWVQEAAEMVPEGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...CTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSLGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTTGAGGCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LEAAEVWDRLIKSTNAHPEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...CGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCACCTCCGGCCCTTCATGGGGCTaGACTCCTGGGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NIKDDFQAPRLLQQPGTSGPSWG*TPGVSP
Trigger: AGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCC...GGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: DWPLKLQVRVWVQEAAEMLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...CATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAGACAGTCCCCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LESGYRRQPRWSLRTDSPLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...GGGACTGTCTGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTCTGGAGAGCTTCTCCTaGCGCTGGTTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTLESFS*RWFSFW
Trigger: CCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAG...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGCTACAGGTTAGAGTCTGGGTACAGGAGGCAGCCGAGATGGTCCCTGAGAACAACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SYRLESGYRRQPRWSLRTTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...TGTTCTCAGGGACCATCTCGGCTGCCTCCTGTACCCAGACTCTAACCTGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTTTGCCAGGGTTATTCTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: GFARVILSECGHSVGLVNTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...GTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTCTCTTCTGCCCCACCTCCTGGGTCCTTAAAATCGAGTCCTGAGTTCCAGAGGACCTCGGGATCGGCGTaGACATCTTCCTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: LSSAPPPGSLKSSPEFQRTSGSA*TSSWNC
Trigger: GCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGT...CCTCTGGAACTCAGGACTCGATTTTAAGGACCCAGGAGGTGGGGCAGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGAGAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: LRTDSPGPPEQAPSSAELHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...CAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGGCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: NRQSRSPGASSILCRAVRHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...CCTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GAACAGACAGTCCCGGTCCCCCGGAGCAAGCTCCATCCTCTGCAGAGCTGTGAGTTCCCATCTAACAGGTaGGGATCACAGCTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: EQTVPVPRSKLHPLQSCEFPSNR*GSQLVG
Trigger: ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAA...CTCACAGCTCTGCAGAGGATGGAGCTTGCTCCGGGGGACCGGGACTGTCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTATAGTGGCGTGATCTaGGCTCACTGTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: SDTQGQGPDWPLKLQVRVYSGVI*AHCDLC
Trigger: GCAGAGGTCACAGTGAGCCAAGATCACGCCACTATA...GACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGAGCTGCTCTCAGCCTGGGGATCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: GVVQGLGLLINGPRAGAALSLGI*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGATCCCCAGGCTGAG...AGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS GCA 90 bp TTCTTATTAATGGACCTGAGGGACGTGGGGGAAAAGCAGCACATCTaGCCCTGGTTGCTAAGGTGCACACGTCCCATGGGAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: FLLMDLRDVGEKQHI*PWLLRCTRPMGAEG
Trigger: GCCTTCAGCTCCCATGGGACGTGTGCACCTTAGCAACCAGGGGCAGATGTGCTGCTTTTCCCCCACGTCCCTCAGGTCCATTAATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000580013.6
ENST00000679370.1
ENST00000679443.1
ENST00000679919.1
CDS-3UTR CAA 90 bp GTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: VSIRHPGPRPRLASEATGQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...ACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTGCCTCTCATACGGGGACGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: SSKCCTLASRLSCLSYGDELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...GTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583818.2
ENST00000679928.1
CDS-3UTR CAA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDILGCRE*SRALAF
Trigger: GAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAA...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCCGGGCTGCCAGACTCTTGGGTaGCAGGGAGTTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LVNIKDDFQAPRLLQQPGCQTLG*QGVVQG
Trigger: GCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCA...GCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ATCCTGGGGCAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: ILGQREVPEAVEGDVTMIEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAAAGATCAGAGGGACATCGAGGCTGCCAGACTCTaGGGTTGCAGGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: AVEGDVTMIHQGKDQRDIEAARL*GCRELS
Trigger: GGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTC...GATGTCCCTCTGATCTTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTGGCCTGGGGATCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: GCRELSRALAFLLMDRGLAWGSW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGATCCCCAGGC...CAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583818.2
CDS-3UTR CAA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: RLPDSWVAGSCPGPWPSYELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...ATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583818.2
ENST00000679429.1
ENST00000679928.1
CDS-3UTR CAA 90 bp ACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTGGCCTCGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: TVSLCEYQTPRAKAQTGLELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...GAGGCCAGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ACCCAGGGCCAAGGCCCAGACTGGCCTCTGAAGCTACAGGTTAGAGTCTGGGTACATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: TQGQGPDWPLKLQVRVWVHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...TACCCAGACTCTAACCTGTAGCTTCAGAGGCCAGTCTGGGCCTTGGCCCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 90 bp GAATGTGGCCAACCAGGAAAGTGGGGCAGCATCACTAATGTGGACTaGAATCCCTGCTCCCTGCAACGTACCACCTCCTGCTTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: ECGQPGKWGSITNVD*NPCSLQRTTSCFRS
Trigger: ACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTCCTGGTTGGCCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS-3UTR CAA 90 bp ACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAAGGACCACAGACAGTGGCAGGTCTaGGTGGAAGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: TSIRKVCCLQHRDMLKDHRQWQV*VEEVDG
Trigger: TCCATCCACCTCTTCCACCAAGACCTGCCACTGTCT...GTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGAGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: RGSQFHSVSIRHPGPRPRQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...TCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000680999.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GCCGGGCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTGAACAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: AGHLHQEGVLSAAQRYAEQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...TTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000681282.1
CDS-3UTR CAA 90 bp CACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTTGAGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGAC +
Preference number: 5 (lower is better)
Translates to: HQGKDQRDIPTLVRQPLEELSRA*AFLLMD
Trigger: GTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTC...CTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GGGTTGCAGGGAGTTGTCCAGGGCCTTGGCCTTCTTATTAATGGACCGAGGGCTCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: GLQGVVQGLGLLINGPRAHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...AGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679429.1
ENST00000679928.1
CDS CCA 90 bp ATCAAGAATGTGGCCAACCAGGAAAGTGGGGCAGCATCACTAATGTaGACTGGAATCCCTGCTCCCTGCAACGTACCACCTCCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: IKNVANQESGAASLM*TGIPAPCNVPPPAL
Trigger: TAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTCCTGGTTGGCCACATTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS-3UTR CAA 90 bp CAACGTGAAGTCCCTGAAGCTGTAGAAGGAGATGTCACCATGATCCACCAGGGCCAGGACAGAGCTTGGTaGGAATCGTCGAACCACATA +
Preference number: 5 (lower is better)
Translates to: QREVPEAVEGDVTMIHQGQDRAW*ESSNHI
Trigger: TATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTG...GCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GTCGGCCTGGTAAACATCAAAGATGATTTCCAAGCCCCCAGACTTCTCCAACAGCTGTCTGAAGCCATGTaGGGGAAGGAGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VGLVNIKDDFQAPRLLQQLSEAM*GKEICS
Trigger: CGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAG...CTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp AGGGTCACAGTTTCACTCTGTGAGTATCAGACACCCAGGGCCAAGGCCCAGACTCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: RVTVSLCEYQTPRAKAQTHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...AGTCTGGGCCTTGGCCCTGGGTGTCTGATACTCACAGAGTGAAACTGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 90 bp CAACCAGGAAAGTGGGGCAGCATCACTAATGTGGACTGGAATCCCTaGTCCCTGCAACGTACCACCTCCTGCTTTAGAAGTTTGGTTATC +
Preference number: 5 (lower is better)
Translates to: QPGKWGSITNVDWNP*SLQRTTSCFRSLVI
Trigger: GATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTCCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS-3UTR CAA 90 bp CTTTCGGAATGTGGCCACAGCGTCGGCCTGGTAAACATCAAAGATGATTTCCAAGGGACAGGACAGAGCTaGGTTGGAATCGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: LSECGHSVGLVNIKDDFQGTGQS*VGIVEP
Trigger: TGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCC...TTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000681282.1
CDS-3UTR CAA 90 bp ATGATCCACCAGGGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: MIHQGKDQRDIPTLVRQPHQEGV*SAAQRY
Trigger: ATATCTCTGTGCTGCAGACAACACACCTTCCTGATG...CGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCTGGTGGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000681282.1
CDS-3UTR CAA 90 bp GCTGCAGAGGTCTGGGACAGGCTCATCAAATCCACTAATGCACATCCGGGCATATTCCCATCTAACAGGTaGGGATCACAGCTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: AAEVWDRLIKSTNAHPGIFPSNR*GSQLVG
Trigger: ACCAACTAGCTGTGATCCCAACCTGTTAGATGGGAA...TATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679928.1
ENST00000681282.1
CDS TCA 90 bp GCACCTCCATCAGGAAGGTGTGTTGTCTGCAGCACAGAGATATGCTaGAGGACCACGGCTACAAGGACACAGAAAACAAGGTACATCTCT +
Preference number: 5 (lower is better)
Translates to: APPSGRCVVCSTEIC*RTTATRTQKTRYIS
Trigger: AGAGATGTACCTTGTTTTCTGTGTCCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680999.1
CDS GCA 90 bp GAAAGTGGGGCAGCATCACTAATGTGGACTGGAATCCCTGCTCCCTaGAACGTACCACCTCCTGCTTTAGAAGTTTGGTTATCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: ESGAASLMWTGIPAP*NVPPPALEVWLSVL
Trigger: GAGAACTGATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS GCA 90 bp ACTAATGTGGACTGGAATCCCTGCTCCCTGCAACGTACCACCTCCTaGTTTAGAAGTTTGGTTATCAGTTCTCTAAAGACCGGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: TNVDWNPCSLQRTTS*FRSLVISSLKTGLC
Trigger: ACACAACCCGGTCTTTAGAGAACTGATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS TCA 90 bp AGACTTCTCCAACAGCCTGACAATACAATGAGAAACGTTATGACATaGACTCTTCTCCCCAACCTTTCTTTTCCATCCCACCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RLLQQPDNTMRNVMT*TLLPNLSFPSHPFP
Trigger: AGGGAAAGGGTGGGATGGAAAAGAAAGGTTGGGGAGAAGAGTTCATGTCATAACGTTTCTCATTGTATTGTCAGGCTGTTGGAGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS TCA 72 bp CGGGGGCGGGAGGCGCTGTCCGGCCCACGACGGTGCTaGAGCGCCACCTCCGCCCGGCACGAGCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RGREALSGPRRC*SATSARHERLL
Trigger: GAGGAGGCGCTCGTGCCGGGCGGAGGTGGCGCTTCAGCACCGTCGTGGGCCGGACAGCGCCTCCCGCCCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679370.1
CDS GCA 72 bp GGCCCGCCCCTCTCACAGGCGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTCTTCCCGGCACCGGCG +
Preference number: 6 (lower is better)
Translates to: GPPLSQALHALL*QQLPELFPAPA
Trigger: CGCCGGTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTGTGAGAGGGGCGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS GCA 72 bp AAGTCCTTGGGGCCATGCGAGCGCTGGGGCAGCTTCTaGGACCGCGAGCGGGCGGCGAAGAGCTCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: KSLGPCERWGSF*DRERAAKSSRA
Trigger: CGCCCGGGAGCTCTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp CTCTTCCCGGCACCGGCGCAGCCGCTCGGCCTGAGCTaGCGAGCCGTCGGGCAGAAAGTCCTTGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: LFPAPAQPLGLS*RAVGQKVLGAM
Trigger: CATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGCGCCGGTGCCGGGAAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp AGCCACCAAGCTGCCCAGGCGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTCTTCCCGGCACCGGCG +
Preference number: 6 (lower is better)
Translates to: SHQAAQALHALL*QQLPELFPAPA
Trigger: CGCCGGTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp CTCGGCAGCCACCAAGAGGCGCTCCACGCGCTGCTCTaGCAGCAGCTGCCAGAGCTCTTCCCGGCACCGGCG +
Preference number: 6 (lower is better)
Translates to: LGSHQEALHALL*QQLPELFPAPA
Trigger: CGCCGGTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTCTTGGTGGCTGCCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578415.1
CDS CCA 72 bp CCGTCGGGCAGAAAGTCCTTGGGGCCATGCGAGCGCTaGGGCAGCTTCTGCGACCGCGAGCGGGCGGCGAAG +
Preference number: 6 (lower is better)
Translates to: PSGRKSLGPCER*GSFCDRERAAK
Trigger: CTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp TCGGCAGCCACCAAGCTGCCCAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAGAGCTCTTCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: SAATKLPRRSTR*SASSCQSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp GGTCACACTTGTGACCGCCCCTCTGCAGCCTCGCGCTaGTTAGTCCCCACCGCCCGGGCTGGGCAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GHTCDRPSAASR*LVPTARAGQGG
Trigger: CCCTCCTTGCCCAGCCCGGGCGGTGGGGACTAAGCAGCGCGAGGCTGCAGAGGGGCGGTCACAAGTGTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS CCA 72 bp CGGCCTGAGCTGCCGAGCCGTCGGGCAGAAAGTCCTTaGGGCCATGCGAGCGCTGGGGCAGCTTCTGCGACC +
Preference number: 6 (lower is better)
Translates to: RPELPSRRAESP*GHASAGAASAT
Trigger: GGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583454.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679782.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp CTCCACTCGGCAGCCACCAAGAGGCGCTCCACGCGCTaGTCTGCCAGCAGCTGCCAGAGCTCTTCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: LHSAATKRRSTR*SASSCQSSSRH
Trigger: GTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTCTTGGTGGCTGCCGAGTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578415.1
CDS CCA 72 bp CCATTCCTTCGGTGTCTTCCGTCCGGTCCCTACGGCTaGGCTCCGAAGCCAGGTTTCGAGGGCCGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: PFLRCLPSGPYG*APKPGFEGRGR
Trigger: CCGCCCCCGGCCCTCGAAACCTGGCTTCGGAGCCCAGCCGTAGGGACCGGACGGAAGACACCGAAGGAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679370.1
CDS CCA 72 bp GCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: ARGRLQLHEALF*PPLGSHQAAQA
Trigger: CGCCTGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333213.11
ENST00000545228.3
ENST00000580013.6
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CCA 72 bp GCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: ARGRLQLHEALF*PPLGSHQAAPG
Trigger: GCCAGGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583454.1
ENST00000583634.1
CDS CCA 72 bp GCCCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGCTGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: ARGRLQLHEALF*PPLGSHQAAPE
Trigger: CTCAGGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579449.2
ENST00000583173.5
CDS CAA 90 bp GAAGGGCTCAGGGAAGGACGAGCGGAGGGTGTGCAAATTCCGACTTaGCAGGCCGAAGGCCACCCGGGAACTGTCAGGAGCGGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: EGLREGRAEGVQIPT*QAEGHPGTVRSGPG
Trigger: CCCCGGACCGCTCCTGACAGTTCCCGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCACACCCTCCGCTCGTCCTTCCCTGAGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS TCA 72 bp CCGGCGTCTGGAGTGCAGTGCGAATGGTCACACTTGTaGCCGCCCCTCTGCAGCCTCGCGCTGCTTAGTCCC +
Preference number: 6 (lower is better)
Translates to: PASGVQCEWSHL*PPLCSLALLSP
Trigger: GGGACTAAGCAGCGCGAGGCTGCAGAGGGGCGGTCACAAGTGTGACCATTCGCACTGCACTCCAGACGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS CCA 72 bp CACCGCGGGAGACTTCAACTCCACGAAGCCCTCTTCTaGCCTCCACTCGGCAGCCACCAAGAGGCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: HRGRLQLHEALF*PPLGSHQEALH
Trigger: GTGGAGCGCCTCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578415.1
CDS GCA 72 bp AGGCGCTGCCGGCCCTGCTCTGAGAAGCCCATGGTCTaGCAGAATTTGCCCGCGGGAGACTTCAACTCCACG +
Preference number: 6 (lower is better)
Translates to: RRCRPCSEKPMV*QNLPAGDFNST
Trigger: CGTGGAGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000579449.2
ENST00000580013.6
ENST00000583173.5
ENST00000583454.1
ENST00000583634.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp GGGAAGGACGAGCGGAGGGTGTGCAAATTCCGACTTTaGAGGCCGAAGGCCACCCGGGAACTGTCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: GKDERRVCKFRL*RPKATRELSGA
Trigger: CGCTCCTGACAGTTCCCGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCACACCCTCCGCTCGTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS TCA 72 bp GAGCCACACTCCAGAAGATACAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGCTCTGAGAAGCCCATG +
Preference number: 6 (lower is better)
Translates to: EPHSRRYKASSG*RRCRPCSEKPM
Trigger: CATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTTGTATCTTCTGGAGTGTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000578415.1
ENST00000579449.2
ENST00000580013.6
ENST00000583173.5
ENST00000583634.1
ENST00000583818.2
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000679928.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS CAA 72 bp AGGGAAGGACGAGCGGAGGGTGTGCAAATTCCGACTTaGCAGGCCGAAGGCCACCCGGGAACTGTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: REGRAEGVQIPT*QAEGHPGTVRS
Trigger: GCTCCTGACAGTTCCCGGGTGGCCTTCGGCCTGCAAAGTCGGAATTTGCACACCCTCCGCTCGTCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434205.8
ENST00000679370.1
CDS CAA 90 bp CAGGGAGGTGGGCTGGAGGCTGCCAGACTCTTGGGTTGCAGGGAGTaGTCCAGGGCCTTGGCCTTCTTATTAATGGACCTGAGGGACGTG +
Preference number: 6 (lower is better)
Translates to: QGGGLEAARLLGCRE*SRALAFLLMDLRDV
Trigger: CACGTCCCTCAGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000580013.6
ENST00000679370.1
ENST00000679443.1
ENST00000679919.1
ENST00000681282.1
CDS TCA 72 bp CTTACACACTCCAGAAGATACAAGGCCTCTTCCGGGTaGAGGCGCTGCCGGCCCTGCTCTGAGAAGCCCATG +
Preference number: 6 (lower is better)
Translates to: LTHSRRYKASSG*RRCRPCSEKPM
Trigger: CATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTTGTATCTTCTGGAGTGTGTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS CAA 90 bp CTGGAGGCTGCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGACCTGAGGGACGTGGGGGAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: LEAARLLGCRELSRA*AFLLMDLRDVGEKQ
Trigger: CTGCTTTTCCCCCACGTCCCTCAGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000580013.6
ENST00000679370.1
ENST00000679443.1
ENST00000679919.1
ENST00000681282.1
CDS TCA 72 bp AGCCTCACAGAGGTGCCACTTGAGGGTTGGGGGCTCTaGACCCTTGGGCTAACCCACTGGTTATTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SLTEVPLEGWGL*TLGLTHWLFSL
Trigger: GAGGGAGAATAACCAGTGGGTTAGCCCAAGGGTTCAGAGCCCCCAACCCTCAAGTGGCACCTCTGTGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS GCA 72 bp TCCTCCAAGTGCTGCACGCTGGCATCCAGGTTAAGCTaGCTCTCATACGGGGACAGGACAGAGCTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SSKCCTLASRLS*LSYGDRTELGW
Trigger: CCAACCAAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000333213.11
ENST00000434205.8
ENST00000545228.3
ENST00000578415.1
ENST00000579449.2
ENST00000580013.6
ENST00000583173.5
ENST00000679370.1
ENST00000679429.1
ENST00000679443.1
ENST00000679782.1
ENST00000679919.1
ENST00000680528.1
ENST00000680999.1
ENST00000681282.1
CDS GCA 72 bp CAACTCCTGGCGGTCAAGGTACTGCAGAGACGGCACTaGTTGGAAACTTACCGGGCACCTCCATCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: QLLAVKVLQRRH*LETYRAPPSGR
Trigger: CCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CCA 72 bp TCCTGGCGGTCAAGGTACTGCAGAGACGGCACTGCTTaGAAACTTACCGGGCACCTCCATCAGGAAGGTGTG +
Preference number: 6 (lower is better)
Translates to: SWRSRYCRDGTA*KLTGHLHQEGV
Trigger: CACACCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CCA 72 bp CCCTACTTCAGGAGCCAGTTCCTAACCACCAACTCCTaGCGGTCAAGGTACTGCAGAGACGGCACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: PYFRSQFLTTNS*RSRYCRDGTAW
Trigger: CCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTGGTGGTTAGGAACTGGCTCCTGAAGTAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CAA 72 bp CTCCTGGCGGTCAAGGTACTGCAGAGACGGCACTGCTaGGAAACTTACCGGGCACCTCCATCAGGAAGGTGT +
Preference number: 6 (lower is better)
Translates to: LLAVKVLQRRHC*ETYRAPPSGRC
Trigger: ACACCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CAA 72 bp GCCAGACTCTTGGGTTGCAGGGAGTTGTCCAGGGCCTaGGCCTTCTTATTAATGGACCTGAGGGACGTGGGG +
Preference number: 6 (lower is better)
Translates to: ARLLGCRELSRA*AFLLMDLRDVG
Trigger: CCCCACGTCCCTCAGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000580013.6
ENST00000679370.1
ENST00000679443.1
ENST00000679919.1
ENST00000681282.1
CDS GCA 72 bp CAGTTCCTAACCACCAACTCCTGGCGGTCAAGGTACTaGAGAGACGGCACTGCTTGGAAACTTACCGGGCAC +
Preference number: 6 (lower is better)
Translates to: QFLTTNSWRSRY*RDGTAWKLTGH
Trigger: GTGCCCGGTAAGTTTCCAAGCAGTGCCGTCTCTGCAGTACCTTGACCGCCAGGAGTTGGTGGTTAGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS CCA 72 bp GTGGCCAACCAGGAAAGTGGGGCAGCATCACTAATGTaGACTGGAATCCCTGCTCCCTGCAACGTACCACCT +
Preference number: 6 (lower is better)
Translates to: VANQESGAASLM*TGIPAPCNVPP
Trigger: AGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTTTCCTGGTTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS GCA 72 bp AGCCTGCATGGGAGCTGCTGGTTCTTAGAAAGCCTGTaGATTTTCCAAGGTCCCAGACACCAGCACTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLHGSCWFLESL*IFQGPRHQHSL
Trigger: CAGGGAGTGCTGGTGTCTGGGACCTTGGAAAATGCACAGGCTTTCTAAGAACCAGCAGCTCCCATGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000580013.6
ENST00000679370.1
ENST00000679443.1
ENST00000679919.1
CDS CAA 90 bp GGCACTGCTTGGAAACTTACCGGGCACCTCCATCAGGAAGGTGTGTaGTCTGCAGCACAGAGATATGCTGAAGGACCACGGCTACAAGGA +
Preference number: 6 (lower is better)
Translates to: GTAWKLTGHLHQEGV*SAAQRYAEGPRLQG
Trigger: TCCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGTAAGTTTCCAAGCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS GCA 72 bp AAGTGGGGCAGCATCACTAATGTGGACTGGAATCCCTaGTCCCTGCAACGTACCACCTCCTGCTTTAGAAGT +
Preference number: 6 (lower is better)
Translates to: KWGSITNVDWNP*SLQRTTSCFRS
Trigger: ACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGCCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS CCA 72 bp TTATTGCTCAGAGCTAGGCGTAGGGGTAGGAGTCCCTaGAACAGTCCTCTAGTTTACACCCTACTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: LLLRARRRGRSP*NSPLVYTLLQE
Trigger: CTCCTGAAGTAGGGTGTAAACTAGAGGACTGTTCCAGGGACTCCTACCCCTACGCCTAGCTCTGAGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577197.2
CDS GCA 72 bp GCAGCATCACTAATGTGGACTGGAATCCCTGCTCCCTaGAACGTACCACCTCCTGCTTTAGAAGTTTGGTTA +
Preference number: 6 (lower is better)
Translates to: AASLMWTGIPAP*NVPPPALEVWL
Trigger: TAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTCCACATTAGTGATGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS GCA 72 bp GACTGGAATCCCTGCTCCCTGCAACGTACCACCTCCTaGTTTAGAAGTTTGGTTATCAGTTCTCTAAAGACC +
Preference number: 6 (lower is better)
Translates to: DWNPCSLQRTTS*FRSLVISSLKT
Trigger: GGTCTTTAGAGAACTGATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS CAA 72 bp TGCTCCCTGCAACGTACCACCTCCTGCTTTAGAAGTTaGGTTATCAGTTCTCTAAAGACCGGGTTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: CSLQRTTSCFRS*VISSLKTGLCV
Trigger: CACACACAACCCGGTCTTTAGAGAACTGATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583454.1
CDS CAA 90 bp TGGAATCCCTGCTCCCTGCAACGTACCACCTCCTGCTTTAGAAGTTaGGTTATCAGTTCTCTAAAGACCGGGTTGTGTGTGCTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: WNPCSLQRTTSCFRS*VISSLKTGLCVLFL
Trigger: GAGAAAAAGCACACACAACCCGGTCTTTAGAGAACTGATAACCAAACTTCTAAAGCAGGAGGTGGTACGTTGCAGGGAGCAGGGATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583454.1