RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC22D3 (Homo sapiens)

Ensembl gene IDs: ENSG00000157514

Ensembl transcript IDs: ENST00000315660.8, ENST00000372382.8, ENST00000372383.8, ENST00000372383.9, ENST00000372384.6, ENST00000372390.8, ENST00000372397.6, ENST00000480691.2, ENST00000486554.1, ENST00000502650.1, ENST00000502961.1, ENST00000503515.1, ENST00000505965.1, ENST00000506081.5, ENST00000506724.1, ENST00000510887.5, ENST00000514426.1, ENST00000514897.5

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAACTACCCTTCTCCTTTaGCAGTTGCAGCTAAGTTGC +
Preference number: 2 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLTTLLL*QLQLSC
Trigger: GCAACTTAGCTGCAACTGGCAAAGGAGAAGGGTAGT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372383.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
3UTR-3UTR CAA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTATCCAGAGACCTGCTCTaGTCAGGGGTCTGTCGCTGG +
Preference number: 3 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLSRDLL*SGVCRW
Trigger: CCAGCGACAGACCCCTGACAAGAGCAGGTCTCTGGA...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372383.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGAGGTCAGGGGCGGCTaGCAGGTGCGCGCCCACCGA +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCAREVRGG*QVRAHR
Trigger: TCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR TCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGCCCACCGAGCTGGCCTaGGGGGACTCCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARPTELA*GDSRVP
Trigger: AGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGG...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTCTGCCCAGCCCTGTCTaGTCCTGCCCGCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCLPSPV*SCPPPL
Trigger: GAGGGGCGGCGGGCAGGACCAGACAGGGCTGGGCAG...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGCTGGGCGGCTGGGTaGCTGCTGGCAGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGWAAG*LLAGCA
Trigger: AGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTCCGCTGCTGCCTCGCTaGAGCCCACTCCGATGGGCC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCPLLPR*SPLRWA
Trigger: GGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGG...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGCTATGGCCACCACGCTaGCTCCGGAGGCACCGGCTC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARLWPPR*LRRHRL
Trigger: GAGCCGGTGCCTCCGGAGCCAGCGTGGTGGCCATAG...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTCAGGCTGCGCTGGGCTaGGCTCTGCGCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCQAALG*ALRWSP
Trigger: CGGACTCCAGCGCAGAGCCCAGCCCAGCGCAGCCTG...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGCCAGGGCGCGCCCTTaGTCCCTCCCTCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCARARP*SLPPLL
Trigger: GAGCAAAGGAGGGAGGGAGCAAGGGCGCGCCCTGGC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGGAGGTCGCCTGGCCTaGGAGGTCAGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKGGRLA*EVRGGW
Trigger: CCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTCTCCCCGCTGCTaGCTCGCTGGAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARCSPRC*LAGAHS
Trigger: GGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACA...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGAGGTCAGGGGCGGCTaGCAGGTGCGCGCCCACCGA +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKEVRGG*QVRAHR
Trigger: TCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTC...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGGCTCGGAGGTCGCCTaGCCTGCGAGGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKGSEVA*PARSGA
Trigger: CGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGGCCTCGGGCACTTGTaGGGATTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARGLGHL*GFGSWL
Trigger: GAGCCAGCTCCCGAATCCCCACAAGTGCCCGAGGCC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGGAGGTCGCCTGGCCTaGGAGGTCAGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVGGRLA*EVRGGW
Trigger: CCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGCAGTTGCAGCTAAGTTaGCCAGGCCCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARQLQLS*PGPGSP
Trigger: GGGGCTCCCAGGGCCTGGGCAACTTAGCTGCAACTG...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCTCGGCCAGCCCCCTaGCCAGCCCTGTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKARPAP*PALSGP
Trigger: AGGACCAGACAGGGCTGGGCAGGGGGCTGGCCGAGC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCTCTCGGGCTCCCCTaGGCTGTGACGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKALGLP*AVTAER
Trigger: CCGCTCAGCCGTCACAGCCCAGGGGAGCCCGAGAGC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCGCGCCCACCGAGCTaGCCTGAGGGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSARPPS*PEGTPG
Trigger: CCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGCCGGCTGCGTCACATaGCGTCAGGGGCCATGCAAA +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARAGCVT*RQGPCK
Trigger: TTTGCATGGCCCCTGACGCCATGTGACGCAGCCGGC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGGTTTCGTGCGGGGCTaGGCGGCTGGGCGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVGFVRG*AAGRLG
Trigger: ACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGGAGGTCGCCTGGCCTaGGAGGTCAGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSGGRLA*EVRGGW
Trigger: CCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGTCCAGGCAGCAGTTaGAGCAGTCGAGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGPGSS*SSRGRQ
Trigger: CTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGTGACGGCTGAGCGGTaGCAGGAGCTGAGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCVTAER*QELRAS
Trigger: ACTCGCTCTCAGCTCCTGCCACCGCTCAGCCGTCAC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCTCTCGGGCTCCCCTaGGCTGTGACGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSALGLP*AVTAER
Trigger: CCGCTCAGCCGTCACAGCCCAGGGGAGCCCGAGAGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGAGGTCAGGGGCGGCTaGCAGGTGCGCGCCCACCGA +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSEVRGG*QVRAHR
Trigger: TCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGGCTCGGAGGTCGCCTaGCCTGCGAGGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSGSEVA*PARSGA
Trigger: CGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCCGCTGCTGCCTCGCTaGAGCCCACTCCGATGGGCC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVPLLPR*SPLRWA
Trigger: GGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGCCCACCGAGCTGGCCTaGGGGGACTCCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSPTELA*GDSRVP
Trigger: AGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGG...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR TCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTGCAGATGCCCTCGTTaGTCAGGTAGCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCCRCPR*SGSRGP
Trigger: GGGACCCCTGCTACCTGATCAACGAGGGCATCTGCA...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCAGGGACGCTTCGATaGCGGATCCCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSAGTLR*RIPERR
Trigger: CCGCCGCTCTGGGATCCGTCATCGAAGCGTCCCTGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCCTCCGGCTGCCTCTaGGGCTGCAGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKASGCL*GCSSWF
Trigger: AAACCAGCTGCTGCAGCCGCAGAGGCAGCCGGAGGC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATGGAGCCCACTCCGATaGGCCAGGTCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKWSPLR*ARSRQQ
Trigger: CTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGGCCTCGGGCACTTGTaGGGATTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKGLGHL*GFGSWL
Trigger: GAGCCAGCTCCCGAATCCCCACAAGTGCCCGAGGCC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGGCTGGGCTCTGCGCTaGAGTCCGGCCCTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVGWALR*SPALRL
Trigger: TAGCCTCAGGGCCGGACTCCAGCGCAGAGCCCAGCC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTGAACTGCCCTGCATaGCCAGGGCCCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKVNCPA*PGPRAP
Trigger: CGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCAC...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGCTGGGCTGTGACGGCTaGGCGGTGGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSLGCDG*AVAGAE
Trigger: CTCAGCTCCTGCCACCGCTCAGCCGTCACAGCCCAG...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCCTCCCTCCCCGGTTTaGAGGCTCTCAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVPPSPV*RLSGSR
Trigger: CCGAGAGCCTGAGAGCCTGCAAACCGGGGAGGGAGG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGCCAGGGCGCGCCCTTaGTCCCTCCCTCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSARARP*SLPPLL
Trigger: GAGCAAAGGAGGGAGGGAGCAAGGGCGCGCCCTGGC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGAGGGGACTCCAGGGTaGCTGGAAAAGACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCAREGTPG*LEKTSC
Trigger: ACAGCTTGTCTTTTCCAGGCACCCTGGAGTCCCCTC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315660.8
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTGTTCTCCCCGCTGCTaGCTCGCTGGAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVCSPRC*LAGAHS
Trigger: GGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGACCAGCTCTCGGATCTaGTCCTTCAGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARTSSRI*SFRIST
Trigger: GGTGGAGATCCTGAAGGAGCAGATCCGAGAGCTGGT...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGCAGTTGCAGCTAAGTTaGCCAGGCCCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKQLQLS*PGPGSP
Trigger: GGGGCTCCCAGGGCCTGGGCAACTTAGCTGCAACTG...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCTGCCTCTGCGGCTaGAGCAGCTGGTTTTCACGG +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKGCLCG*SSWFSR
Trigger: CCGTGAAAACCAGCTGCTGCAGCCGCAGAGGCAGCC...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372390.8
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGAGGGGACTCCAGGGTaGCTGTGGAGGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVEGTPG*LWRQEG
Trigger: CCCTTCCTGCCTCCACAGGCACCCTGGAGTCCCCTC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372384.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGAAAAGACAAGCTGTaGAGGCAGGAAGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGKDKL*RQEGRA
Trigger: TGCCCGCCCTTCCTGCCTCCACAGCTTGTCTTTTCC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315660.8
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGGAGCCCACTCCGATaGGCCAGGTCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSWSPLR*ARSRQQ
Trigger: CTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGCCTCGGGCACTTGTaGGGATTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGLGHL*GFGSWL
Trigger: GAGCCAGCTCCCGAATCCCCACAAGTGCCCGAGGCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAACTATGGCCACCACGCTaGCTCCGGAGGCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKLWPPR*LRRHCP
Trigger: GGGACAATGCCTCCGGAGCCAGCGTGGTGGCCATAG...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGACTCCAGGGTGCCTGTaGAGGCAGGAAGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVTPGCL*RQEGRA
Trigger: TGCCCGCCCTTCCTGCCTCCACAGGCACCCTGGAGT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372384.6
CDS-3UTR TCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTGCAGATGCCCTCGTTaGTCAGGTAGCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKCRCPR*SGSRGP
Trigger: GGGACCCCTGCTACCTGATCAACGAGGGCATCTGCA...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGTCCAGGCAGCAGTTaGAGCAGTCGAGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGPGSS*SSRGRQ
Trigger: CTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTACCAGCTCTCGGATCTaGTCCTTCAGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCTSSRI*SFRIST
Trigger: GGTGGAGATCCTGAAGGAGCAGATCCGAGAGCTGGT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCCAGTTGCAGCTAAGTTaGCCAGGCCCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSQLQLS*PGPGSP
Trigger: GGGGCTCCCAGGGCCTGGGCAACTTAGCTGCAACTG...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAGCGGCAATCGAGCTTaGACTGGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSGNRA*TGPSSQ
Trigger: CTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGAGCCCACTCCGATaGGCCAGGTCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSWSPLR*ARSRQQ
Trigger: CTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCCTATGGCCACCACGCTaGCTCCGGAGGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSLWPPR*LRRHCG
Trigger: TCCACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAG...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGCTGTAATCCCACACTaGGCTGTGCACAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARAVIPH*AVHKAM
Trigger: CATGGCTTTGTGCACAGCCCAGTGTGGGATTACAGC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGCTGCTAGGAAGCTCTaGCCGGGTTTCGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSAARKL*PGFVRG
Trigger: GCCCCGCACGAAACCCGGCCAGAGCTTCCTAGCAGC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGTCGAGGCCGACAGGTaGGCGGCAATCGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSVEADR*AAIELG
Trigger: TCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGAC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGCAGATGCCCTCGTTaGTCAGGTAGCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSCRCPR*SGSRGP
Trigger: GGGACCCCTGCTACCTGATCAACGAGGGCATCTGCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR TCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGTAAAGTTCTCCTCGTaGGATGATGCTTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCVKFSS*DDAWGA
Trigger: GGCTCCCCAAGCATCATCTCACGAGGAGAACTTTAC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCCGCTCCAGCTGGAGTTaGAGGGAAGTGACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSRSSWS*REVTRG
Trigger: CCCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCG...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGAAGACCAGCTTTTCCTaGAGCTGCCGAAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARKTSFS*SCRKLL
Trigger: GAGCAACTTTCGGCAGCTGCAGGAAAAGCTGGTCTT...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGCAGTTGCAGCTAAGTTaGCCAGGCCCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSQLQLS*PGPGSP
Trigger: GGGGCTCCCAGGGCCTGGGCAACTTAGCTGCAACTG...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAGCGCGCCCACCGAGCTaGCCTGAGGGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLARPPS*PEGTPG
Trigger: CCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGC...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAGGCTCGGAGGTCGCCTaGCCTGCGAGGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLGSEVA*PARSGA
Trigger: CGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCC...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGAAGAAGAGCAGGATaGAGAGCATGGTCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGRRAG*RAWSGR
Trigger: TCGACCAGACCATGCTCTCCATCCTGCTCTTCTTCC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCTCCGGAGGCACTGTaGAAGAAGAGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKAPEAL*KKSRME
Trigger: CTCCATCCTGCTCTTCTTCCACAGTGCCTCCGGAGC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGCTATGGCCACCACGCTaGCTCCGGAGGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSLWPPR*LRRHCG
Trigger: TCCACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAG...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCTATGGCCACCACGCTaGCTCCGGAGGCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVLWPPR*LRRHCC
Trigger: ACAACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
3UTR CAA 72 bp GAGTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EWTQVAMSLGHL*APAVLGVKFSS
Trigger: CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372383.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGAGTTGAAGGGAAGTaGCTCGAGGGGTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGVEGK*LEGCHL
Trigger: GAGGTGACACCCCTCGAGTCACTTCCCTTCAACTCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR TCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTCTCTGTGGATCATGTaGACTGCCCTGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKSLWIM*TALHGQ
Trigger: CTGGCCATGCAGGGCAGTTCACATGATCCACAGAGA...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR GCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATGGTCTGGTCGATGTTaGGGTTGCAGATGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKWSGRC*GCRCPR
Trigger: ACGAGGGCATCTGCAACCGCAACATCGACCAGACCA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGACCAGCTCTCGGATCTaGTCCTTCAGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKTSSRI*SFRIST
Trigger: GGTGGAGATCCTGAAGGAGCAGATCCGAGAGCTGGT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAACCAGCTCTCGGATCTaGTCCTTCAGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKTSSRI*SFRIST
Trigger: GGTGGAGATCCTGAAGGAGCAGATCCGAGAGCTGGT...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTCCCACACTGGGCTGTaGACAAAGCCATGCATTATA +
Preference number: 4 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARSHTGL*TKPCII
Trigger: TATAATGCATGGCTTTGTGCACAGCCCAGTGTGGGA...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTCATGTGAACTGCCCTaGATGGCCAGGGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSCELP*MARAQS
Trigger: GCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGTGGATCATGTGAACTaGCCTGCATGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSVDHVN*PAWPGP
Trigger: GGGCCCTGGCCATGCAGGGCAGTTCACATGATCCAC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTACCGCTGCTGCCTCGCTaGAGCCCACTCCGATGGGCC +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLPLLPR*SPLRWA
Trigger: GGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGG...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGCTCCGGAGGCACTGTaGAAGAAGAGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVAPEAL*KKSRME
Trigger: CTCCATCCTGCTCTTCTTCCACAGTGCCTCCGGAGC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGTTCCACTCCAGTGTaGGAGACTATAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGSTPV*ETIDRK
Trigger: CTTCCTGTCTATAGTCTCCCACACTGGAGTGGAACC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR TCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTACTGGGCTGTGACGGCTaGGCGGTGGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLLGCDG*AVAGAE
Trigger: CTCAGCTCCTGCCACCGCTCAGCCGTCACAGCCCAG...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCTCTAGCGAATCCTaGCGCATTATGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKGSSES*RIMLLS
Trigger: GCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCC...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGGTCTGGTCGATGTTaGGGTTGCAGATGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSWSGRC*GCRCPR
Trigger: ACGAGGGCATCTGCAACCGCAACATCGACCAGACCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCACCAGCTCTCGGATCTaGTCCTTCAGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSTSSRI*SFRIST
Trigger: GGTGGAGATCCTGAAGGAGCAGATCCGAGAGCTGGT...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTCCCACACTGGGCTGTaGACAAAGCCATGCATTATA +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSHTGL*TKPCII
Trigger: TATAATGCATGGCTTTGTGCACAGCCCAGTGTGGGA...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGAGGGGACTCCAGGGTaGCTGGAAAAGACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSEGTPG*LEKTSF
Trigger: GAAGCTTGTCTTTTCCAGGCACCCTGGAGTCCCCTC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506081.5
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGACTCCAGGGTGCCTaGAAAAGACAAGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGLQGA*KRQAVE
Trigger: CTCCACAGCTTGTCTTTTCCAGGCACCCTGGAGTCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315660.8
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCAATCGAGCTTGGACTaGGCCATCTTCTCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVQSSLD*AIFSGS
Trigger: CGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGAGCGGCAATCGAGCTTaGACTGGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVSGNRA*TGPSSQ
Trigger: CTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGATGGAGAGCATGGTCTaGTCGATGTTGCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKMESMV*SMLRLQ
Trigger: CTGCAACCGCAACATCGACCAGACCATGCTCTCCAT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGCTCCGGAGGCACTGTaGAAGAAGAGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSAPEAL*KKSRME
Trigger: CTCCATCCTGCTCTTCTTCCACAGTGCCTCCGGAGC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGACATTTCGGTGTTCATaGCTCGGGCTGCTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKTFRCS*LGLLGS
Trigger: GCTTCCTAGCAGCCCGAGCCATGAACACCGAAATGT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR TCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGTAAAGTTCTCCTCGTaGGATGATGCTTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVVKFSS*DDAWGA
Trigger: GGCTCCCCAAGCATCATCTCACGAGGAGAACTTTAC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGTAAAGTTCTCCTCGTaGGATGATGCTTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSVKFSS*DDAWGA
Trigger: GGCTCCCCAAGCATCATCTCACGAGGAGAACTTTAC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR GCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTACCTCCCTCCCCGGTTTaGAGGCTCTCAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLPPSPV*RLSGSR
Trigger: CCGAGAGCCTGAGAGCCTGCAAACCGGGGAGGGAGG...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGAAGACCAGCTTTTCCTaGAGCTGCCGAAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKKTSFS*SCRKLL
Trigger: GAGCAACTTTCGGCAGCTGCAGGAAAAGCTGGTCTT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGGCTCTAGCGAATCCTaGCGCATTATGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVGSSES*RIMLLS
Trigger: GCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGCTCTAGCGAATCCTaGCGCATTATGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGSSES*RIMLLS
Trigger: GCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCATGGAGAGCATGGTCTaGTCGATGTTGCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSMESMV*SMLRLQ
Trigger: CTGCAACCGCAACATCGACCAGACCATGCTCTCCAT...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGAAGAAGAGCAGGATaGAGAGCATGGTCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGRRAG*RAWSGR
Trigger: TCGACCAGACCATGCTCTCCATCCTGCTCTTCTTCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTCTTCACCAGATCCATaGCCTGTTCGATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSSPDP*PVRSCC
Trigger: ACAACAAGATCGAACAGGCCATGGATCTGGTGAAGA...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAGGCCTCGGGCACTTGTaGGGATTCGGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLGLGHL*GFGSWL
Trigger: GAGCCAGCTCCCGAATCCCCACAAGTGCCCGAGGCC...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCTGTAATCCCACACTaGGCTGTGCACAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSAVIPH*AVHKAM
Trigger: CATGGCTTTGTGCACAGCCCAGTGTGGGATTACAGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGCCCAAGGAGAATCTTaGTGGAGAGATGGACACTGT +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKAQGES*WRDGHC
Trigger: ACAGTGTCCATCTCTCCACCAAGATTCTCCTTGGGC...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGTAAAGTTCTCCTCGTaGGATGATGCTTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSVKFSS*DDAWGA
Trigger: GGCTCCCCAAGCATCATCTCACGAGGAGAACTTTAC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGACCTGCCACCTTAGTTaGTCTCCGTCTGTCGTTACC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSTCHLS*SPSVVT
Trigger: GGTAACGACAGACGGAGATCAACTAAGGTGGCAGGT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506081.5
CDS-3UTR GCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAAGCTTTTCCTGCAGCTaGCGAAAGTTGCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKSFSCS*RKLLTV
Trigger: TACAGTGAGCAACTTTCGGCAGCTGCAGGAAAAGCT...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGAAGACCAGCTTTTCCTaGAGCTGCCGAAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVKTSFS*SCRKLL
Trigger: GAGCAACTTTCGGCAGCTGCAGGAAAAGCTGGTCTT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGACTACCCTTCTCCTTTaGCAGTTGCAGCTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKTTLLL*QLQLSC
Trigger: GCAACTTAGCTGCAACTGGCAAAGGAGAAGGGTAGT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAGACAGGAAGGCCACTaGCACTTACATAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCRQEGH*HLHSYF
Trigger: AAAGTAACTATGTAAGTGGCAGTGGCCTTCCTGTCT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAGTGACGGCTGAGCGGTaGCAGGAGCTGAGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLVTAER*QELRAS
Trigger: ACTCGCTCTCAGCTCCTGCCACCGCTCAGCCGTCAC...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGGAAGAAGAGCAGGATaGAGAGCATGGTCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSGRRAG*RAWSGR
Trigger: TCGACCAGACCATGCTCTCCATCCTGCTCTTCTTCC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGCTGTAATCCCACACTaGGCTGTGCACAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSAVIPH*AVHKAM
Trigger: CATGGCTTTGTGCACAGCCCAGTGTGGGATTACAGC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAGTGAATGGTGGGTTTaGCATTCAAAACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSEWWV*HSKQDF
Trigger: GAAGTCCTGTTTTGAATGCCAAACCCACCATTCACT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGGACTCCAGGGTGCCTaGAAAAGACAAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSGLQGA*KRQASP
Trigger: AGGAGAAGCTTGTCTTTTCCAGGCACCCTGGAGTCC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506081.5
CDS-3UTR TCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAAGATGTCCATGGAGATaGGAAACAGACCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKRCPWR*ETDPLN
Trigger: GTTTAAGGGGTCTGTTTCTCATCTCCATGGACATCT...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGTCCTTCTCCTTTTCTaGACCTTACCTGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSVLLLF*TLPATL
Trigger: TAAGGTGGCAGGTAAGGTTCAGAAAAGGAGAAGGAC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506081.5
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGAGCTTTTCCTGCAGCTaGCGAAAGTTGCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVSFSCS*RKLLTV
Trigger: TACAGTGAGCAACTTTCGGCAGCTGCAGGAAAAGCT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGACTACCCTTCTCCTTTaGCAGTTGCAGCTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVTTLLL*QLQLSC
Trigger: GCAACTTAGCTGCAACTGGCAAAGGAGAAGGGTAGT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCCCACACTGGGCTGTaGACAAAGCCATGCATTATA +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSSHTGL*TKPCII
Trigger: TATAATGCATGGCTTTGTGCACAGCCCAGTGTGGGA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTCCCACACTGGGCTGTaGACAAAGCCATGCATTATA +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVSHTGL*TKPCII
Trigger: TATAATGCATGGCTTTGTGCACAGCCCAGTGTGGGA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAGAGCGGGGCGAAGGCTaGAGAACGAACCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLERGEG*RTNPKP
Trigger: TGGCTTTGGGTTCGTTCTGCAGCCTTCGCCCCGCTC...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATCTTCACCAGATCCATaGCCTGTTCGATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKSSPDP*PVRSCC
Trigger: ACAACAAGATCGAACAGGCCATGGATCTGGTGAAGA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGCTTTCTGGAGCAAACTaGTGTCACACCTCAAACTAC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKLSGAN*CHTSNY
Trigger: GTAGTTTGAGGTGTGACACCAGTTTGCTCCAGAAAG...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAACAAGGAGAATCTTGGTaGAGAGATGGACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKQGESW*RDGHCL
Trigger: AAGACAGTGTCCATCTCTCCACCAAGATTCTCCTTG...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR TCA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCAGATGTCCATGGAGATaGGAAACAGACCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSRCPWR*ETDPLN
Trigger: GTTTAAGGGGTCTGTTTCTCATCTCCATGGACATCT...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGACTACCCTTCTCCTTTaGCAGTTGCAGCTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSTTLLL*QLQLSC
Trigger: GCAACTTAGCTGCAACTGGCAAAGGAGAAGGGTAGT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR GCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGTTTAATTTGTCCTTaGTTCTCGCTTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGLICP*FSLIFS
Trigger: AGAGAAGATAAGCGAGAAGCAAGGACAAATTAAACC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTCTTCACCAGATCCATaGCCTGTTCGATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVSSPDP*PVRSCC
Trigger: ACAACAAGATCGAACAGGCCATGGATCTGGTGAAGA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCTTTCTGGAGCAAACTaGTGTCACACCTCAAACTAC +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVLSGAN*CHTSNY
Trigger: GTAGTTTGAGGTGTGACACCAGTTTGCTCCAGAAAG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGAGTGAATGGTGGGTTTaGCATTCAAAACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKSEWWV*HSKQDF
Trigger: GAAGTCCTGTTTTGAATGCCAAACCCACCATTCACT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGAGATGGACACTGTCTTaGAAAAGCAGCTCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKRWTLS*KSSSSN
Trigger: ATTGCTAGAGCTGCTTTTCCAAGACAGTGTCCATCT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR TCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGAGATGTCCATGGAGATaGGAAACAGACCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSRCPWR*ETDPLN
Trigger: GTTTAAGGGGTCTGTTTCTCATCTCCATGGACATCT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTACAATCGAGCTTGGACTaGGCCATCTTCTCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLQSSLD*AIFSGS
Trigger: CGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTG...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTCTTCACCAGATCCATaGCCTGTTCGATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSSPDP*PVRSCC
Trigger: ACAACAAGATCGAACAGGCCATGGATCTGGTGAAGA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CCA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTACAGATCTAGCCCTATaGGTATATATACGCATTTAT +
Preference number: 4 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCTDLAL*VYIRIY
Trigger: ATAAATGCGTATATATACCCATAGGGCTAGATCTGT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAAGACCGCCACCTCCATaGGGGTCTGATACATTTCGG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLRPPPP*GSDTFR
Trigger: CCGAAATGTATCAGACCCCCATGGAGGTGGCGGTCT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGAGTGAATGGTGGGTTTaGCATTCAAAACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSEWWV*HSKQDF
Trigger: GAAGTCCTGTTTTGAATGCCAAACCCACCATTCACT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR TCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAACCTCCATGGGGGTCTaGTACATTTCGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLTSMGV*YISVFM
Trigger: CATGAACACCGAAATGTATCAGACCCCCATGGAGGT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CCA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGACAGATCTAGCCCTATaGGTATATATACGCATTTAT +
Preference number: 4 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVTDLAL*VYIRIY
Trigger: ATAAATGCGTATATATACCCATAGGGCTAGATCTGT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR TCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAAGATGTCCATGGAGATaGGAAACAGACCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLRCPWR*ETDPLN
Trigger: GTTTAAGGGGTCTGTTTCTCATCTCCATGGACATCT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTACTTTCTGGAGCAAACTaGTGTCACACCTCAAACTAC +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLLSGAN*CHTSNY
Trigger: GTAGTTTGAGGTGTGACACCAGTTTGCTCCAGAAAG...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAAGTGAATGGTGGGTTTaGCATTCAAAACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLSEWWV*HSKQDF
Trigger: GAAGTCCTGTTTTGAATGCCAAACCCACCATTCACT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CCA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAACAGATCTAGCCCTATaGGTATATATACGCATTTAT +
Preference number: 4 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLTDLAL*VYIRIY
Trigger: ATAAATGCGTATATATACCCATAGGGCTAGATCTGT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS CCA 90 bp CCGGGTTTCGTGCGGGGCTGGGCGGCTGGGCGGCTGGGTGGCTGCTaGCAGGCTGCGCTGGGCTGGGCTCTGCGCTGGAGTCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PGFVRGWAAGRLGGC*QAALGWALRWSPAL
Trigger: CAGGGCCGGACTCCAGCGCAGAGCCCAGCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 90 bp TGGGCGGCTGGGCGGCTGGGTGGCTGCTGGCAGGCTGCGCTGGGCTaGGCTCTGCGCTGGAGTCCGGCCCTGAGGCTAGGAGCGGGGCGA +
Preference number: 5 (lower is better)
Translates to: WAAGRLGGCWQAALG*ALRWSPALRLGAGR
Trigger: TCGCCCCGCTCCTAGCCTCAGGGCCGGACTCCAGCGCAGAGCCCAGCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 90 bp GCTCTGGCCGGGTTTCGTGCGGGGCTGGGCGGCTGGGCGGCTGGGTaGCTGCTGGCAGGCTGCGCTGGGCTGGGCTCTGCGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ALAGFRAGLGGWAAG*LLAGCAGLGSALES
Trigger: GGACTCCAGCGCAGAGCCCAGCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACCCGGCCAGAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 90 bp GGAAGCTCTGGCCGGGTTTCGTGCGGGGCTGGGCGGCTGGGCGGCTaGGTGGCTGCTGGCAGGCTGCGCTGGGCTGGGCTCTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: GSSGRVSCGAGRLGG*VAAGRLRWAGLCAG
Trigger: TCCAGCGCAGAGCCCAGCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACCCGGCCAGAGCTTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 90 bp GGCCTGCGAGGTCAGGGGCGGCTGGCAGGTGCGCGCCCACCGAGCTaGCCTGAGGGGACTCCAGGGTGCCTGTGGAGGCAGGAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: GLRGQGRLAGARPPS*PEGTPGCLWRQEGR
Trigger: CCGCCCTTCCTGCCTCCACAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372384.6
CDS GCA 90 bp GGCTCAGCGCTGCTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTaGTTGCGAGTCCTGGGGCGCGCAGGCCACCGTGGCCTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GSALLPPPRVPTDRS*LRVLGRAGHRGLLG
Trigger: CCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 90 bp ATGGCTCGGGCTGCTAGGAAGCTCTGGCCGGGTTTCGTGCGGGGCTaGGCGGCTGGGCGGCTGGGTGGCTGCTGGCAGGCTGCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MARAARKLWPGFVRG*AAGRLGGCWQAALG
Trigger: GCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACCCGGCCAGAGCTTCCTAGCAGCCCGAGCCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS GCA 90 bp CTGGCAGGTGCGCGCCCACCGAGCTGGCCTGAGGGGACTCCAGGGTaGCTGGAAAAGACAAGCCTCGCCCGCGCTCCTGGGAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LAGARPPSWPEGTPG*LEKTSLARAPGSRP
Trigger: GGGCCGGCTCCCAGGAGCGCGGGCGAGGCTTGTCTTTTCCAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506724.1
CDS CCA 90 bp CTTCTCAGGCTCGGAGGTCGCCTGGCCTGCGAGGTCAGGGGCGGCTaGCAGGTGCGCGCCCACCGAGCTGGCCTGAGGGGACTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LLRLGGRLACEVRGG*QVRAHRAGLRGLQG
Trigger: ACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 90 bp GAGCTTGGACTGGGCCATCTTCTCAGGCTCGGAGGTCGCCTGGCCTaGGAGGTCAGGGGCGGCTGGCAGGTGCGCGCCCACCGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ELGLGHLLRLGGRLA*EVRGGWQVRAHRAG
Trigger: GCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 90 bp CAGCGCTGCTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTTaGGAGTCCTGGGGCGCGCAGGCCACCGTGGCCTGCTCGGGCAAT +
Preference number: 5 (lower is better)
Translates to: QRCCRRPEFQPIGAA*ESWGAQATVACSGN
Trigger: ATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 90 bp CAATCGAGCTTGGACTGGGCCATCTTCTCAGGCTCGGAGGTCGCCTaGCCTGCGAGGTCAGGGGCGGCTGGCAGGTGCGCGCCCACCGAG +
Preference number: 5 (lower is better)
Translates to: QSSLDWAIFSGSEVA*PARSGAAGRCAPTE
Trigger: CTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 90 bp GCCCCTGCAGGAAGCTGCATCTCCTCATCCAGGCCGGCTCAGCGCTaGTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTTGCGAG +
Preference number: 5 (lower is better)
Translates to: APAGSCISSSRPAQR*CRRPEFQPIGAACE
Trigger: CTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCCTGCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 90 bp CCTGCAGGAAGCTGCATCTCCTCATCCAGGCCGGCTCAGCGCTGCTaGCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTTGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PAGSCISSSRPAQRC*RRPEFQPIGAACES
Trigger: GGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 90 bp CCGGACAGTTTGTCCCCAGATCCTTCCTTGGCCCCTGCAGGAAGCTaGATCTCCTCATCCAGGCCGGCTCAGCGCTGCTGCCGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PDSLSPDPSLAPAGS*ISSSRPAQRCCRRP
Trigger: GGGGCGGCGGCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCCTGCAGGGGCCAAGGAAGGATCTGGGGACAAACTGTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 90 bp GGCTCTCAGGCTCTCGGGCTCCCCTGGGCTGTGACGGCTGAGCGGTaGCAGGAGCTGAGAGCGAGTGAGCTAGTTAGCGGTCTGCACGCC +
Preference number: 5 (lower is better)
Translates to: GSQALGLPWAVTAER*QELRASELVSGLHA
Trigger: GGCGTGCAGACCGCTAACTAGCTCACTCGCTCTCAGCTCCTGCCACCGCTCAGCCGTCACAGCCCAGGGGAGCCCGAGAGCCTGAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS CCA 90 bp TGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTTGCGAGTCCTaGGGCGCGCAGGCCACCGTGGCCTGCTCGGGCAATATGCAAACA +
Preference number: 5 (lower is better)
Translates to: CRRPEFQPIGAACES*GAQATVACSGNMQT
Trigger: TGTTTGCATATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 90 bp GGGTTGTTGTTCTCCCCGCTGCTGCCTCGCTGGAGCCCACTCCGATaGGCCAGGTCCAGGCAGCAGTTGCAGCAGTCGAGGCCGACAGGT +
Preference number: 5 (lower is better)
Translates to: GLLFSPLLPRWSPLR*ARSRQQLQQSRPTG
Trigger: ACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 90 bp ACTGTAGGGCTGCCCGGGTTGTTGTTCTCCCCGCTGCTGCCTCGCTaGAGCCCACTCCGATGGGCCAGGTCCAGGCAGCAGTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TVGLPGLLFSPLLPR*SPLRWARSRQQLQQ
Trigger: CTGCTGCAACTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 90 bp AACCGATCGGAGCTGCTTGCGAGTCCTGGGGCGCGCAGGCCACCGTaGCCTGCTCGGGCAATATGCAAACAATGGGGCTGTGCGACCCGG +
Preference number: 5 (lower is better)
Translates to: NRSELLASPGARRPP*PARAICKQWGCATR
Trigger: CCGGGTCGCACAGCCCCATTGTTTGCATATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 90 bp TGCCTCGCTGGAGCCCACTCCGATGGGCCAGGTCCAGGCAGCAGTTaGAGCAGTCGAGGCCGACAGGTGAGCGGCAATCGAGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: CLAGAHSDGPGPGSS*SSRGRQVSGNRAWT
Trigger: AGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCAGCGAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 90 bp TTGCAGCAGTCGAGGCCGACAGGTGAGCGGCAATCGAGCTTGGACTaGGCCATCTTCTCAGGCTCGGAGGTCGCCTGGCCTGCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LQQSRPTGERQSSLD*AIFSGSEVAWPARS
Trigger: TGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 90 bp AGCAGTTGCAGCAGTCGAGGCCGACAGGTGAGCGGCAATCGAGCTTaGACTGGGCCATCTTCTCAGGCTCGGAGGTCGCCTGGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: SSCSSRGRQVSGNRA*TGPSSQARRSPGLR
Trigger: TCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS TCA 90 bp ATGGGCCAGGTCCAGGCAGCAGTTGCAGCAGTCGAGGCCGACAGGTaGGCGGCAATCGAGCTTGGACTGGGCCATCTTCTCAGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: MGQVQAAVAAVEADR*AAIELGLGHLLRLG
Trigger: TCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACCTGGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 90 bp GCCCAGAGTTCCGGACAGTTTGTCCCCAGATCCTTCCTTGGCCCCTaGAGGAAGCTGCATCTCCTCATCCAGGCCGGCTCAGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AQSSGQFVPRSFLGP*RKLHLLIQAGSALL
Trigger: CAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCCTGCAGGGGCCAAGGAAGGATCTGGGGACAAACTGTCCGGAACTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS-3UTR CAA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGAGCCAGGGCGCGCCCTaGCTCCCTCCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARSQGAP*LPPSFA
Trigger: AGCAAAGGAGGGAGGGAGCAAGGGCGCGCCCTGGCT...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS CCA 90 bp GGTAGACCGCCACCTCCATGGGGGTCTGATACATTTCGGTGTTCATaGCTCGGGCTGCTAGGAAGCTCTGGCCGGGTTTCGTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GRPPPPWGSDTFRCS*LGLLGSSGRVSCGA
Trigger: AGCCCCGCACGAAACCCGGCCAGAGCTTCCTAGCAGCCCGAGCCATGAACACCGAAATGTATCAGACCCCCATGGAGGTGGCGGTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGGGCTGCCCGGGTTGTaGTTCTCCCCGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCGLPGL*FSPLLP
Trigger: AGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGTAGGGCTGCCCGGGTaGTTGTTCTCCCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARVGLPG*LFSPLL
Trigger: CAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTAC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS CCA 90 bp CGGCCCCCTTCTGGCTGTACTGCTCCGGGTGCGAATAGAAACAGCTaGACAAACAGCTCCGAGCGGATCCTTCGGGCTCACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RPPSGCTAPGANRNS*TNSSERILRAHFLL
Trigger: GAGGAGGAAGTGAGCCCGAAGGATCCGCTCGGAGCTGTTTGTCCAGCTGTTTCTATTCGCACCCGGAGCAGTACAGCCAGAAGGGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372383.9
CDS TCA 90 bp TGGAGAGCATGGTCTGGTCGATGTTGCGGTTGCAGATGCCCTCGTTaGTCAGGTAGCAGGGGTCCCGCAGCACCGGCTCTAGCGAATCCT +
Preference number: 5 (lower is better)
Translates to: WRAWSGRCCGCRCPR*SGSRGPAAPALANP
Trigger: AGGATTCGCTAGAGCCGGTGCTGCGGGACCCCTGCTACCTGATCAACGAGGGCATCTGCAACCGCAACATCGACCAGACCATGCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS TCA 90 bp CGAACCCAAAGCCAAGCAGGCGCTCCAGCTGGAGTTGAAGGGAAGTaGCTCGAGGGGTGTCACCTCGTATGTCACAAACTCCACGGCCGC +
Preference number: 5 (lower is better)
Translates to: RTQSQAGAPAGVEGK*LEGCHLVCHKLHGR
Trigger: GCGGCCGTGGAGTTTGTGACATACGAGGTGACACCCCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCGCCTGCTTGGCTTTGGGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS-3UTR CAA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAAGCCAGGGCGCGCCCTaGCTCCCTCCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKSQGAP*LPPSFA
Trigger: AGCAAAGGAGGGAGGGAGCAAGGGCGCGCCCTGGCT...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGGGCTGCCCGGGTTGTaGTTCTCCCCGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSGLPGL*FSPLLP
Trigger: AGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGGGCTGCCCGGGTTGTaGTTCTCCCCGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVGLPGL*FSPLLP
Trigger: AGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGAGGGGCCTCGGGCACTaGTGGGGATTCGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVRGLGH*WGFGSW
Trigger: CCAGCTCCCGAATCCCCACAAGTGCCCGAGGCCCCT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCAGGGGCCTCGGGCACTaGTGGGGATTCGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSRGLGH*WGFGSW
Trigger: CCAGCTCCCGAATCCCCACAAGTGCCCGAGGCCCCT...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTCCAGAGACCTGCTCTaGTCAGGGGTCTGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSRDLL*SGVCRW
Trigger: CCAGCGACAGACCCCTGACAAGAGCAGGTCTCTGGA...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGGCTCCGGAGGCACTGTaGTCCAGCTTAACGGAAACC +
Preference number: 5 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARAPEAL*SSLTET
Trigger: GGTTTCCGTTAAGCTGGACAACAGTGCCTCCGGAGC...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS CCA 90 bp CTGAGGGGCGTGCCCCAGCTCTGTAAGATGGAGGGATGTTCTGGGTaGGCAAGTGGTGGGTTTCCAGGGTTTCTCAGGACTCAGAGACTT +
Preference number: 5 (lower is better)
Translates to: LRGVPQLCKMEGCSG*ASGGFPGFLRTQRL
Trigger: AAGTCTCTGAGTCCTGAGAAACCCTGGAAACCCACCACTTGCCCACCCAGAACATCCCTCCATCTTACAGAGCTGGGGCACGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502961.1
ENST00000514897.5
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTGAGCGGCAATCGAGCTaGGACTGGGCCATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCERQSS*DWAIFS
Trigger: TGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTC...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGTAGGGCTGCCCGGGTaGTTGTTCTCCCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSVGLPG*LFSPLL
Trigger: CAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTAC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTATGGTCTGGTCGATGTaGCGGTTGCAGATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCMVWSM*RLQMPS
Trigger: CGAGGGCATCTGCAACCGCAACATCGACCAGACCAT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGAGGGGCCTCGGGCACTaGTGGGGATTCGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSRGLGH*WGFGSW
Trigger: CCAGCTCCCGAATCCCCACAAGTGCCCGAGGCCCCT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS TCA 90 bp GGCTGCAGAACGAACCCAAAGCCAAGCAGGCGCTCCAGCTGGAGTTaGAGGGAAGTGACTCGAGGGGTGTCACCTCGTATGTCACAAACT +
Preference number: 5 (lower is better)
Translates to: GCRTNPKPSRRSSWS*REVTRGVSPRMSQT
Trigger: AGTTTGTGACATACGAGGTGACACCCCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCGCCTGCTTGGCTTTGGGTTCGTTCTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS-3UTR CAA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATGCAGCTGCCGAAAGTaGCTCACTGTAGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKCSCRK*LTVGLP
Trigger: GGGCAGCCCTACAGTGAGCAACTTTCGGCAGCTGCA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATCCAGAGACCTGCTCTaGTCAGGGGTCTGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKSRDLL*SGVCRW
Trigger: CCAGCGACAGACCCCTGACAAGAGCAGGTCTCTGGA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS GCA 90 bp GACAGAGAAAGAGAAAGTGCCTTGTTCTCTGTGGATCATGTGAACTaGCCTGCATGGCCAGGGCCCAGAGCTCCGAATTTCAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: DRERESALFSVDHVN*PAWPGPRAPNFRGR
Trigger: CCTGCCCCTGAAATTCGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGATCCACAGAGAACAAGGCACTTTCTCTTTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 90 bp CACAAACTCCACGGCCGCCAGTCCAACCCAGACTCGGAGATATTTTaGCTCCTGCTTCTTTATATAGGAGGAGCCGGCTGCGTCACATGG +
Preference number: 5 (lower is better)
Translates to: HKLHGRQSNPDSEIF*LLLLYIGGAGCVTW
Trigger: CCATGTGACGCAGCCGGCTCCTCCTATATAAAGAAGCAGGAGCCAAAATATCTCCGAGTCTGGGTTGGACTGGCGGCCGTGGAGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS CCA 90 bp AGAGAAAGTGCCTTGTTCTCTGTGGATCATGTGAACTGCCCTGCATaGCCAGGGCCCAGAGCTCCGAATTTCAGGGGCAGGAAAATGGGG +
Preference number: 5 (lower is better)
Translates to: RESALFSVDHVNCPA*PGPRAPNFRGRKMG
Trigger: CCCCATTTTCCTGCCCCTGAAATTCGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGATCCACAGAGAACAAGGCACTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTGCAGCTGCCGAAAGTaGCTCACTGTAGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVCSCRK*LTVGLP
Trigger: GGGCAGCCCTACAGTGAGCAACTTTCGGCAGCTGCA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGCAGCTGCCGAAAGTaGCTCACTGTAGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSCSCRK*LTVGLP
Trigger: GGGCAGCCCTACAGTGAGCAACTTTCGGCAGCTGCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGT +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCSLGHL*APAVLG
Trigger: ACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGA...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCGCTCCAGCTGGAGTaGAAGGGAAGTGACTCGAGG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSALQLE*KGSDSR
Trigger: CCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS CCA 90 bp AGAAGGAGATGGAGAAATTGTGCAGCTGGTAGACCGCCACCTCCATaGGGGTCTGATACATTTCGGTGTTCATGGCTCGGGCTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: RRRWRNCAAGRPPPP*GSDTFRCSWLGLLG
Trigger: TCCTAGCAGCCCGAGCCATGAACACCGAAATGTATCAGACCCCCATGGAGGTGGCGGTCTACCAGCTGCACAATTTCTCCATCTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 90 bp CGACCCATTACCCACTCGGTTCTACTCTTGAGTACATGGCAGTTGTaGCCAAAGTCCTCCATCTGCCTCGGCTCTTCCTCTCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RPITHSVLLLSTWQL*PKSSICLGSSSLSP
Trigger: AGGAGAGAGAGAGGAAGAGCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGAGCGGCAATCGAGCTaGGACTGGGCCATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSERQSS*DWAIFS
Trigger: TGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAATGGTCGATGTTGCGGTaGCAGATGCCCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKWSMLR*QMPSLI
Trigger: GATCAACGAGGGCATCTGCAACCGCAACATCGACCA...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCATGGTCTGGTCGATGTaGCGGTTGCAGATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSMVWSM*RLQMPS
Trigger: CGAGGGCATCTGCAACCGCAACATCGACCAGACCAT...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGGCCTGTTCGATCTTGTaGTCTATGGCCACCACGCTG +
Preference number: 5 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKACSIL*SMATTL
Trigger: CAGCGTGGTGGCCATAGACAACAAGATCGAACAGGC...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTCCAGAGACCTGCTCTaGTCAGGGGTCTGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSRDLL*SGVCRW
Trigger: CCAGCGACAGACCCCTGACAAGAGCAGGTCTCTGGA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS TCA 90 bp GTCGTTACCCTTTCAATAGATGTAGCGATTGCATGTTCACAGGCCTaGGGGGCGTGCCCCAGCTCTGTAAGATGGAGGGATGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: VVTLSIDVAIACSQA*GACPSSVRWRDVLG
Trigger: ACCCAGAACATCCCTCCATCTTACAGAGCTGGGGCACGCCCCTCAGGCCTGTGAACATGCAATCGCTACATCTATTGAAAGGGTAACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502961.1
ENST00000514897.5
CDS GCA 90 bp CTGTTGAGCTTGTCGGTATTGAGGTTCTCAAAGACCAGCTTTTCCTaGAGCTGCCGAAAGTTGCTCACTGTAGGGCTGCCCGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLSLSVLRFSKTSFS*SCRKLLTVGLPGLL
Trigger: CAACAACCCGGGCAGCCCTACAGTGAGCAACTTTCGGCAGCTGCAGGAAAAGCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGGAGCGGCAATCGAGCTaGGACTGGGCCATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSERQSS*DWAIFS
Trigger: TGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTC...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGGTCGATGTTGCGGTaGCAGATGCCCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSWSMLR*QMPSLI
Trigger: GATCAACGAGGGCATCTGCAACCGCAACATCGACCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCGCCTGTTCGATCTTGTaGTCTATGGCCACCACGCTG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSACSIL*SMATTL
Trigger: CAGCGTGGTGGCCATAGACAACAAGATCGAACAGGC...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGCCTGTTCGATCTTGTaGTCTATGGCCACCACGCTG +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVACSIL*SMATTL
Trigger: CAGCGTGGTGGCCATAGACAACAAGATCGAACAGGC...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp CCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: PGGHVLRTSLGTSCARCKMACSI*LSMATT
Trigger: CGTGGTGGCCATAGACAACAAGATCGAACAGGCCAT...TTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKMACSI*LSMATT
Trigger: CGTGGTGGCCATAGACAACAAGATCGAACAGGCCAT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGT +
Preference number: 5 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKSLGHL*APAVLG
Trigger: ACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGA...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGCTGGCTCCGGAGGCATaGTCCCTTTTTCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVLAPEA*SLFLKR
Trigger: CCTCTTCAGAAAAAGGGACAATGCCTCCGGAGCCAG...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS GCA 90 bp AGAAAGAGAAAGTGCCTTGTTCTCTGTGGATCATGTGAACTGCCCTaGATGGCCAGGGCCCAGAGCTCCGAATTTCAGGGGCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: RKRKCLVLCGSCELP*MARAQSSEFQGQEN
Trigger: ATTTTCCTGCCCCTGAAATTCGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGATCCACAGAGAACAAGGCACTTTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 90 bp AAAGCAAAGCGACCCATTACCCACTCGGTTCTACTCTTGAGTACATaGCAGTTGTGGCCAAAGTCCTCCATCTGCCTCGGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: KAKRPITHSVLLLST*QLWPKSSICLGSSS
Trigger: AGAGGAAGAGCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCGCTTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS-3UTR CAA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGATTATGCTGTTGAGCTaGTCGGTATTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARIMLLS*SVLRFS
Trigger: TGAGAACCTCAATACCGACAAGCTCAACAGCATAAT...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGGTCGATGTTGCGGTaGCAGATGCCCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSWSMLR*QMPSLI
Trigger: GATCAACGAGGGCATCTGCAACCGCAACATCGACCA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVMACSI*LSMATT
Trigger: CGTGGTGGCCATAGACAACAAGATCGAACAGGCCAT...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGT +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVSLGHL*APAVLG
Trigger: ACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGT +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSSLGHL*APAVLG
Trigger: ACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS CCA 90 bp GATGCAGAAGGCGATGATGAGTGGGAGGGAGCCCAAGGAGAATCTTaGTGGAGAGATGGACACTGTCTTGGAAAAGCAGCTCTAGCAATT +
Preference number: 5 (lower is better)
Translates to: DAEGDDEWEGAQGES*WRDGHCLGKAALAI
Trigger: AATTGCTAGAGCTGCTTTTCCAAGACAGTGTCCATCTCTCCACCAAGATTCTCCTTGGGCTCCCTCCCACTCATCATCGCCTTCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTGCCGCATTATGCTGTaGAGCTTGTCGGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSCRIML*SLSVLR
Trigger: CCTCAATACCGACAAGCTCAACAGCATAATGCGGCA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTGCCGCATTATGCTGTaGAGCTTGTCGGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVCRIML*SLSVLR
Trigger: CCTCAATACCGACAAGCTCAACAGCATAATGCGGCA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSMACSI*LSMATT
Trigger: CGTGGTGGCCATAGACAACAAGATCGAACAGGCCAT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTCCTTAGGACATCTCTaGGCACCAGCTGTGCTAGGT +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSLGHL*APAVLG
Trigger: ACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGA...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315660.8
ENST00000372382.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GTGGACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGAGACTCGGAGATATTTaGGCTCCTGCTTCTTTATAT +
Preference number: 5 (lower is better)
Translates to: VDPGGHVLRTSLGTSCARRLGDI*APASLY
Trigger: ATATAAAGAAGCAGGAGCCAAAATATCTCCGAGTCT...CCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGAGCCCAAGGAGAATCTaGGTGGAGAGATGGACACTG +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSSPRRI*VERWTL
Trigger: CAGTGTCCATCTCTCCACCAAGATTCTCCTTGGGCT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS TCA 90 bp GAGTTACATAAGCAGCAGCTAAGTCAGGGGATGAGAATGACGCAGTaGTGCCACTCACCATGGCCTGTTCGATCTTGTTGTCTATGGCCA +
Preference number: 5 (lower is better)
Translates to: ELHKQQLSQGMRMTQ*CHSPWPVRSCCLWP
Trigger: TGGCCATAGACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGCGTCATTCTCATCCCCTGACTTAGCTGCTGCTTATGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTTGAGCTTGTCGGTATaGAGGTTCTCAAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVLSLSV*RFSKTS
Trigger: GCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTTGAGCTTGTCGGTATaGAGGTTCTCAAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: AMSLGHLLAPAVLGVKFSLSLSV*RFSKTS
Trigger: GCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAA...GGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTATGCCATGGTTTAATTaGTCCTTGCTTCTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCMPWFN*SLLLAY
Trigger: ATAAGCGAGAAGCAAGGACAAATTAAACCATGGCAT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CAA 90 bp CAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGATTATGCTGTTGAGCTaGTCGGTATTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: QVAMSLGHLLAPAVLGVKIMLLS*SVLRFS
Trigger: TGAGAACCTCAATACCGACAAGCTCAACAGCATAAT...CTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS-3UTR CAA 90 bp GACCCAGGTGGCCATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTACTTACATAGTTACTTaGGTTTCATGGAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: DPGGHVLRTSLGTSCARCTYIVT*VSWKIP
Trigger: GGGGATTTTCCATGAAACCAAAGTAACTATGTAAGT...ACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACATGGCCACCTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CAA 90 bp ATGTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGATTATGCTGTTGAGCTaGTCGGTATTGAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: MSLGHLLAPAVLGVKFSSIMLLS*SVLRFS
Trigger: TGAGAACCTCAATACCGACAAGCTCAACAGCATAAT...CGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000506081.5
CDS-3UTR CAA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTAATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLMACSI*LSMATT
Trigger: CGTGGTGGCCATAGACAACAAGATCGAACAGGCCAT...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315660.8
ENST00000372384.6
ENST00000372390.8
ENST00000372397.6
CDS-3UTR CAA 90 bp GTCCTTAGGACATCTCTTGGCACCAGCTGTGCTAGGTGTAAAGTTCTCCTCGTGTGGTTTAATTTGTCCTaGCTTCTCGCTTATCTTCTC +
Preference number: 5 (lower is better)
Translates to: VLRTSLGTSCARCKVLLVWFNLS*LLAYLL
Trigger: GAGAAGATAAGCGAGAAGCAAGGACAAATTAAACCA...CACGAGGAGAACTTTACACCTAGCACAGCTGGTGCCAAGAGATGTCCTAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS GCA 90 bp TTCTGGTTCCACTCCAGTGTGGGAGACTATAGACAGGAAGGCCACTaGCACTTACATAGTTACTTTGGTTTCATGGAAAATCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: FWFHSSVGDYRQEGH*HLHSYFGFMENPQS
Trigger: ACTTTGGGGATTTTCCATGAAACCAAAGTAACTATGTAAGTGGCAGTGGCCTTCCTGTCTATAGTCTCCCACACTGGAGTGGAACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 90 bp ATAGACAGGAAGGCCACTGCCACTTACATAGTTACTTTGGTTTCATaGAAAATCCCCAAAGTCCAGAAGGAGGGAAGCAAGAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: IDRKATATYIVTLVS*KIPKVQKEGSKKER
Trigger: TCTTTCCTTCTTGCTTCCCTCCTTCTGGACTTTGGGGATTTTCCATGAAACCAAAGTAACTATGTAAGTGGCAGTGGCCTTCCTGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS-3UTR CAA 90 bp CATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTTCACTCTCACAAAACCCGCTATTGAGCTTGTCGGTATaGAGGTTCTCAAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: HQDKVSKSGKCSLSQNPLLSLSV*RFSKTS
Trigger: GCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAA...TAGCGGGTTTTGTGAGAGTGAACACTTTCCACTTTTTGACACCTTATCCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS GCA 72 bp CTGGGCGGCTGGGCGGCTGGGTGGCTGCTGGCAGGCTaGGCTGGGCTGGGCTCTGCGCTGGAGTCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: LGGWAAGWLLAG*AGLGSALESGP
Trigger: AGGGCCGGACTCCAGCGCAGAGCCCAGCCCAGCGCAGCCTGCCAGCAGCCACCCAGCCGCCCAGCCGCCCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 72 bp CTCGGAGGTCGCCTGGCCTGCGAGGTCAGGGGCGGCTaGCAGGTGCGCGCCCACCGAGCTGGCCTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: LGGRLACEVRGG*QVRAHRAGLRG
Trigger: TCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 72 bp GGACGGCGGAGAACGGTCCTCCGCCACTTCTCCGGCTaGCGGGCGGGGGCCCCGAGCGGCTGGATCCTGTCC +
Preference number: 6 (lower is better)
Translates to: GRRRTVLRHFSG*RAGAPSGWILS
Trigger: GGACAGGATCCAGCCGCTCGGGGCCCCCGCCCGCCAGCCGGAGAAGTGGCGGAGGACCGTTCTCCGCCGTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502650.1
CDS TCA 72 bp GGGGCGGCTGGCAGGTGCGCGCCCACCGAGCTGGCCTaGGGGGACTCCAGGGTGCCTGTGGAGGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GAAGRCAPTELA*GDSRVPVEAGR
Trigger: CCTTCCTGCCTCCACAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372384.6
CDS CCA 72 bp GGTCAGGGGCGGCTGGCAGGTGCGCGCCCACCGAGCTaGCCTGAGGGGACTCCAGGGTGCCTGTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GQGRLAGARPPS*PEGTPGCLWRQ
Trigger: CTGCCTCCACAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372384.6
CDS GCA 72 bp CTGGGCCATCTTCTCAGGCTCGGAGGTCGCCTGGCCTaGGAGGTCAGGGGCGGCTGGCAGGTGCGCGCCCAC +
Preference number: 6 (lower is better)
Translates to: LGHLLRLGGRLA*EVRGGWQVRAH
Trigger: GTGGGCGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 72 bp CTGCTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTaGTTGCGAGTCCTGGGGCGCGCAGGCCACCGTGGC +
Preference number: 6 (lower is better)
Translates to: LLPPPRVPTDRS*LRVLGRAGHRG
Trigger: GCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CAA 72 bp CTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTaGCGAGTCCTGGGGCGCGCAGGCCACCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: LPPPRVPTDRSC*RVLGRAGHRGL
Trigger: CAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CAA 90 bp TCAGCGCTGCTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCTaGCGAGTCCTGGGGCGCGCAGGCCACCGTGGCCTGCTCGGGCAA +
Preference number: 6 (lower is better)
Translates to: SALLPPPRVPTDRSC*RVLGRAGHRGLLGQ
Trigger: TTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp GCGCGCCCACCGAGCTGGCCTGAGGGGACTCCAGGGTaGCTGGAAAAGACAAGCCTCGCCCGCGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ARPPSWPEGTPG*LEKTSLARAPG
Trigger: CCCAGGAGCGCGGGCGAGGCTTGTCTTTTCCAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506724.1
CDS CCA 72 bp TTGGACTGGGCCATCTTCTCAGGCTCGGAGGTCGCCTaGCCTGCGAGGTCAGGGGCGGCTGGCAGGTGCGCG +
Preference number: 6 (lower is better)
Translates to: LDWAIFSGSEVA*PARSGAAGRCA
Trigger: CGCGCACCTGCCAGCCGCCCCTGACCTCGCAGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 72 bp AGGGTGCCTGGAAAAGACAAGCCTCGCCCGCGCTCCTaGGAGCCGGCCCGGCTCTCACTCTCTCGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RVPGKDKPRPRS*EPARLSLSRRA
Trigger: GGCTCGCCGAGAGAGTGAGAGCCGGGCCGGCTCCCAGGAGCGCGGGCGAGGCTTGTCTTTTCCAGGCACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506724.1
CDS CAA 72 bp GGGAGAGCCAGGGCGCGCCCTTGCTCCCTCCCTCCTTaGCTCCCTCCCTCCCCGGTTTGCAGGCTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: GRARARPCSLPP*LPPSPVCRLSG
Trigger: GCCTGAGAGCCTGCAAACCGGGGAGGGAGGGAGCAAAGGAGGGAGGGAGCAAGGGCGCGCCCTGGCTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS CCA 72 bp CCCCGGTTTGCAGGCTCTCAGGCTCTCGGGCTCCCCTaGGCTGTGACGGCTGAGCGGTGGCAGGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: PRFAGSQALGLP*AVTAERWQELR
Trigger: TCTCAGCTCCTGCCACCGCTCAGCCGTCACAGCCCAGGGGAGCCCGAGAGCCTGAGAGCCTGCAAACCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315660.8
ENST00000372384.6
CDS CCA 72 bp CTGCCCGGGTTGTTGTTCTCCCCGCTGCTGCCTCGCTaGAGCCCACTCCGATGGGCCAGGTCCAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LPGLLFSPLLPR*SPLRWARSRQQ
Trigger: CTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCCGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 72 bp GGTCAGGGGCGGCTGGCAGGTGCGCGCCCACCGAGCTaGCCTGAGGGGACTCCAGGGTGCCTTCTCCTATTT +
Preference number: 6 (lower is better)
Translates to: GQGRLAGARPPS*PEGTPGCLLLF
Trigger: AAATAGGAGAAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGCACCTGCCAGCCGCCCCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480691.2
CDS CCA 72 bp CCCGAGTTCCAACCGATCGGAGCTGCTTGCGAGTCCTaGGGCGCGCAGGCCACCGTGGCCTGCTCGGGCAAT +
Preference number: 6 (lower is better)
Translates to: PEFQPIGAACES*GAQATVACSGN
Trigger: ATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTCCGATCGGTTGGAACTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp AGCTGCATCTCCTCATCCAGGCCGGCTCAGCGCTGCTaGCGCCGCCCCGAGTTCCAACCGATCGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SCISSSRPAQRC*RRPEFQPIGAA
Trigger: AGCAGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp GGAAGCTGCATCTCCTCATCCAGGCCGGCTCAGCGCTaGTGCCGCCGCCCCGAGTTCCAACCGATCGGAGCT +
Preference number: 6 (lower is better)
Translates to: GSCISSSRPAQR*CRRPEFQPIGA
Trigger: AGCTCCGATCGGTTGGAACTCGGGGCGGCGGCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 72 bp AGGCCACCGTGGCCTGCTCGGGCAATATGCAAACAATaGGGCTGTGCGACCCGGGGAGTCCCCCACAGCCGG +
Preference number: 6 (lower is better)
Translates to: RPPWPARAICKQ*GCATRGVPHSR
Trigger: CCGGCTGTGGGGGACTCCCCGGGTCGCACAGCCCCATTGTTTGCATATTGCCCGAGCAGGCCACGGTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp GGAGCCCACTCCGATGGGCCAGGTCCAGGCAGCAGTTaGAGCAGTCGAGGCCGACAGGTGAGCGGCAATCGA +
Preference number: 6 (lower is better)
Translates to: GAHSDGPGPGSS*SSRGRQVSGNR
Trigger: TCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACCTGGCCCATCGGAGTGGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 72 bp GCTTGCGAGTCCTGGGGCGCGCAGGCCACCGTGGCCTaGTCGGGCAATATGCAAACAATGGGGCTGTGCGAC +
Preference number: 6 (lower is better)
Translates to: ACESWGAQATVA*SGNMQTMGLCD
Trigger: GTCGCACAGCCCCATTGTTTGCATATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CCA 72 bp TCGAGGCCGACAGGTGAGCGGCAATCGAGCTTGGACTaGGCCATCTTCTCAGGCTCGGAGGTCGCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SRPTGERQSSLD*AIFSGSEVAWP
Trigger: AGGCCAGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CCA 72 bp GAGCTGCTTGCGAGTCCTGGGGCGCGCAGGCCACCGTaGCCTGCTCGGGCAATATGCAAACAATGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: ELLASPGARRPP*PARAICKQWGC
Trigger: ACAGCCCCATTGTTTGCATATTGCCCGAGCAGGCCACGGTGGCCTGCGCGCCCCAGGACTCGCAAGCAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp TTGTCCCCAGATCCTTCCTTGGCCCCTGCAGGAAGCTaGATCTCCTCATCCAGGCCGGCTCAGCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LSPDPSLAPAGS*ISSSRPAQRCC
Trigger: GCAGCAGCGCTGAGCCGGCCTGGATGAGGAGATGCAGCTTCCTGCAGGGGCCAAGGAAGGATCTGGGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp AACCCCTCAGAGGCAGTCTCTGTCCCGGTTTCCCTCTaGCCCTTCGCCGTCTCTCCTCAGTCCTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: NPSEAVSVPVSL*PFAVSPQSSPS
Trigger: GGAAGGGGAGGACTGAGGAGAGACGGCGAAGGGGCAGAGGGAAACCGGGACAGAGACTGCCTCTGAGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510887.5
CDS CCA 72 bp AGCAGTCGAGGCCGACAGGTGAGCGGCAATCGAGCTTaGACTGGGCCATCTTCTCAGGCTCGGAGGTCGCCT +
Preference number: 6 (lower is better)
Translates to: SSRGRQVSGNRA*TGPSSQARRSP
Trigger: AGGCGACCTCCGAGCCTGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CAA 72 bp AGCTGCCGAAAGTTGCTCACTGTAGGGCTGCCCGGGTaGTTGTTCTCCCCGCTGCTGCCTCGCTGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SCRKLLTVGLPG*LFSPLLPRWSP
Trigger: TGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTACAGTGAGCAACTTTCGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS CAA 90 bp TTTTCCTGCAGCTGCCGAAAGTTGCTCACTGTAGGGCTGCCCGGGTaGTTGTTCTCCCCGCTGCTGCCTCGCTGGAGCCCACTCCGATGG +
Preference number: 6 (lower is better)
Translates to: FSCSCRKLLTVGLPG*LFSPLLPRWSPLRW
Trigger: CCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTACAGTGAGCAACTTTCGGCAGCTGCAGGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS TCA 72 bp GTCCAGGCAGCAGTTGCAGCAGTCGAGGCCGACAGGTaGGCGGCAATCGAGCTTGGACTGGGCCATCTTCTC +
Preference number: 6 (lower is better)
Translates to: VQAAVAAVEADR*AAIELGLGHLL
Trigger: GAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000502961.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514897.5
CDS GCA 72 bp GCGCGCCCACCGAGCTGGCCTGAGGGGACTCCAGGGTaGCTGGAAAAGACAAGATTTCAGTCAGTACTCCCC +
Preference number: 6 (lower is better)
Translates to: ARPPSWPEGTPG*LEKTRFQSVLP
Trigger: GGGGAGTACTGACTGAAATCTTGTCTTTTCCAGGCACCCTGGAGTCCCCTCAGGCCAGCTCGGTGGGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505965.1
CDS CAA 72 bp TCCTTCTCGCCTCCCTGGCCCAGAGTTCCGGACAGTTaGTCCCCAGATCCTTCCTTGGCCCCTGCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SFSPPWPRVPDS*SPDPSLAPAGS
Trigger: GCTTCCTGCAGGGGCCAAGGAAGGATCTGGGGACAAACTGTCCGGAACTCTGGGCCAGGGAGGCGAGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS TCA 72 bp TGGTCTGGTCGATGTTGCGGTTGCAGATGCCCTCGTTaGTCAGGTAGCAGGGGTCCCGCAGCACCGGCTCTA +
Preference number: 6 (lower is better)
Translates to: WSGRCCGCRCPR*SGSRGPAAPAL
Trigger: TAGAGCCGGTGCTGCGGGACCCCTGCTACCTGATCAACGAGGGCATCTGCAACCGCAACATCGACCAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS CCA 72 bp CCACCTCCATGGGGGTCTGATACATTTCGGTGTTCATaGCTCGGGCTGCTAGGAAGCTCTGGCCGGGTTTCG +
Preference number: 6 (lower is better)
Translates to: PPPWGSDTFRCS*LGLLGSSGRVS
Trigger: CGAAACCCGGCCAGAGCTTCCTAGCAGCCCGAGCCATGAACACCGAAATGTATCAGACCCCCATGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CAA 72 bp GCAGTGATGCCACTCACCATGGCCTGTTCGATCTTGTaGTCTATGGCCACCACGCTGGCTCCGGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: AVMPLTMACSIL*SMATTLAPEAL
Trigger: CAGTGCCTCCGGAGCCAGCGTGGTGGCCATAGACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS CAA 72 bp GACGCAGTGATGCCACTCACCATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACGCTGGCTCCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: DAVMPLTMACSI*LSMATTLAPEA
Trigger: TGCCTCCGGAGCCAGCGTGGTGGCCATAGACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGCGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS CAA 90 bp GAGAATGACGCAGTGATGCCACTCACCATGGCCTGTTCGATCTTGTaGTCTATGGCCACCACGCTGGCTCCGGAGGCACTGTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: ENDAVMPLTMACSIL*SMATTLAPEALLSS
Trigger: GCTGGACAACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAGACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGCGTCATTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS TCA 72 bp ACGAACCCAAAGCCAAGCAGGCGCTCCAGCTGGAGTTaGAGGGAAGTGACTCGAGGGGTGTCACCTCGTATG +
Preference number: 6 (lower is better)
Translates to: TNPKPSRRSSWS*REVTRGVSPRM
Trigger: CATACGAGGTGACACCCCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCGCCTGCTTGGCTTTGGGTTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 72 bp TCTGGCTGTACTGCTCCGGGTGCGAATAGAAACAGCTaGACAAACAGCTCCGAGCGGATCCTTCGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SGCTAPGANRNS*TNSSERILRAH
Trigger: GTGAGCCCGAAGGATCCGCTCGGAGCTGTTTGTCCAGCTGTTTCTATTCGCACCCGGAGCAGTACAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372383.9
CDS CAA 90 bp AGGCTGCAGAACGAACCCAAAGCCAAGCAGGCGCTCCAGCTGGAGTaGAAGGGAAGTGACTCGAGGGGTGTCACCTCGTATGTCACAAAC +
Preference number: 6 (lower is better)
Translates to: RLQNEPKAKQALQLE*KGSDSRGVTSYVTN
Trigger: GTTTGTGACATACGAGGTGACACCCCTCGAGTCACTTCCCTTCAACTCCAGCTGGAGCGCCTGCTTGGCTTTGGGTTCGTTCTGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CAA 90 bp GATGAGAATGACGCAGTGATGCCACTCACCATGGCCTGTTCGATCTaGTTGTCTATGGCCACCACGCTGGCTCCGGAGGCACTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: DENDAVMPLTMACSI*LSMATTLAPEALLS
Trigger: GGACAACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAGACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGCGTCATTCTCATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS GCA 72 bp AAGTGCCTTGTTCTCTGTGGATCATGTGAACTGCCCTaGATGGCCAGGGCCCAGAGCTCCGAATTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: KCLVLCGSCELP*MARAQSSEFQG
Trigger: CCCCTGAAATTCGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGATCCACAGAGAACAAGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 72 bp CACGGCCGCCAGTCCAACCCAGACTCGGAGATATTTTaGCTCCTGCTTCTTTATATAGGAGGAGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: HGRQSNPDSEIF*LLLLYIGGAGC
Trigger: GCAGCCGGCTCCTCCTATATAAAGAAGCAGGAGCCAAAATATCTCCGAGTCTGGGTTGGACTGGCGGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS CCA 72 bp CAGGGCCCAGAGCTCCGAATTTCAGGGGCAGGAAAATaGGGAGGAGAATGCAGATGCAGATGCAGAAGGCGA +
Preference number: 6 (lower is better)
Translates to: QGPELRISGAGK*GGECRCRCRRR
Trigger: TCGCCTTCTGCATCTGCATCTGCATTCTCCTCCCCATTTTCCTGCCCCTGAAATTCGGAGCTCTGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 72 bp GTGCCCCAGCTCTGTAAGATGGAGGGATGTTCTGGGTaGGCAAGTGGTGGGTTTCCAGGGTTTCTCAGGACT +
Preference number: 6 (lower is better)
Translates to: VPQLCKMEGCSG*ASGGFPGFLRT
Trigger: AGTCCTGAGAAACCCTGGAAACCCACCACTTGCCCACCCAGAACATCCCTCCATCTTACAGAGCTGGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502961.1
ENST00000514897.5
CDS CAA 72 bp CCACGGCCGCCAGTCCAACCCAGACTCGGAGATATTTaGGCTCCTGCTTCTTTATATAGGAGGAGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: PRPPVQPRLGDI*APASLYRRSRL
Trigger: CAGCCGGCTCCTCCTATATAAAGAAGCAGGAGCCAAAATATCTCCGAGTCTGGGTTGGACTGGCGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS CAA 90 bp GGGTCCCGCAGCACCGGCTCTAGCGAATCCTGCCGCATTATGCTGTaGAGCTTGTCGGTATTGAGGTTCTCAAAGACCAGCTTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GSRSTGSSESCRIML*SLSVLRFSKTSFSC
Trigger: GCAGGAAAAGCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCCGGTGCTGCGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS GCA 72 bp TGTTGTCTATGGCCACCACGCTGGCTCCGGAGGCACTaGCAAGACAAAAAGCAAAGCGACCCATTACCCACT +
Preference number: 6 (lower is better)
Translates to: CCLWPPRWLRRH*QDKKQSDPLPT
Trigger: AGTGGGTAATGGGTCGCTTTGCTTTTTGTCTTGGCAGTGCCTCCGGAGCCAGCGTGGTGGCCATAGACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS GCA 72 bp TCCGTCTGTCGTTACCCTTTCAATAGATGTAGCGATTaGATGTTCACAGGCCTGAGGGGCGTGCCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SVCRYPFNRCSD*MFTGLRGVPQL
Trigger: GAGCTGGGGCACGCCCCTCAGGCCTGTGAACATGCAATCGCTACATCTATTGAAAGGGTAACGACAGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502961.1
ENST00000514897.5
CDS CCA 72 bp TGGAGAAATTGTGCAGCTGGTAGACCGCCACCTCCATaGGGGTCTGATACATTTCGGTGTTCATGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: WRNCAAGRPPPP*GSDTFRCSWLG
Trigger: CCCGAGCCATGAACACCGAAATGTATCAGACCCCCATGGAGGTGGCGGTCTACCAGCTGCACAATTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372397.6
ENST00000503515.1
CDS CCA 72 bp CGACCCATTACCCACTCGGTTCTACTCTTGAGTACATaGCAGTTGTGGCCAAAGTCCTCCATCTGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: RPITHSVLLLST*QLWPKSSICLG
Trigger: GCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CAA 90 bp CGCAGCACCGGCTCTAGCGAATCCTGCCGCATTATGCTGTTGAGCTaGTCGGTATTGAGGTTCTCAAAGACCAGCTTTTCCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RSTGSSESCRIMLLS*SVLRFSKTSFSCSC
Trigger: GCAGCTGCAGGAAAAGCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCCGGTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS CAA 90 bp TCACAAACTCCACGGCCGCCAGTCCAACCCAGACTCGGAGATATTTaGGCTCCTGCTTCTTTATATAGGAGGAGCCGGCTGCGTCACATG +
Preference number: 6 (lower is better)
Translates to: SQTPRPPVQPRLGDI*APASLYRRSRLRHM
Trigger: CATGTGACGCAGCCGGCTCCTCCTATATAAAGAAGCAGGAGCCAAAATATCTCCGAGTCTGGGTTGGACTGGCGGCCGTGGAGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372397.6
CDS GCA 72 bp AGAGAAAGTGCCTTGTTCTCTGTGGATCATGTGAACTaGCCTGCATGGCCAGGGCCCAGAGCTCCGAATTTC +
Preference number: 6 (lower is better)
Translates to: RESALFSVDHVN*PAWPGPRAPNF
Trigger: GAAATTCGGAGCTCTGGGCCCTGGCCATGCAGGGCAGTTCACATGATCCACAGAGAACAAGGCACTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 72 bp GGCGATGATGAGTGGGAGGGAGCCCAAGGAGAATCTTaGTGGAGAGATGGACACTGTCTTGGAAAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GDDEWEGAQGES*WRDGHCLGKAA
Trigger: AGCTGCTTTTCCAAGACAGTGTCCATCTCTCCACCAAGATTCTCCTTGGGCTCCCTCCCACTCATCATCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CAA 90 bp AAGCGACCCATTACCCACTCGGTTCTACTCTTGAGTACATGGCAGTaGTGGCCAAAGTCCTCCATCTGCCTCGGCTCTTCCTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: KRPITHSVLLLSTWQ*WPKSSICLGSSSLS
Trigger: AGAGAGAGAGGAAGAGCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS TCA 72 bp CTTTCAATAGATGTAGCGATTGCATGTTCACAGGCCTaGGGGGCGTGCCCCAGCTCTGTAAGATGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: LSIDVAIACSQA*GACPSSVRWRD
Trigger: ATCCCTCCATCTTACAGAGCTGGGGCACGCCCCTCAGGCCTGTGAACATGCAATCGCTACATCTATTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502961.1
ENST00000514897.5
CDS CAA 72 bp AGCACCGGCTCTAGCGAATCCTGCCGCATTATGCTGTaGAGCTTGTCGGTATTGAGGTTCTCAAAGACCAGC +
Preference number: 6 (lower is better)
Translates to: STGSSESCRIML*SLSVLRFSKTS
Trigger: GCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCCGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS CAA 72 bp ATTACCCACTCGGTTCTACTCTTGAGTACATGGCAGTaGTGGCCAAAGTCCTCCATCTGCCTCGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: ITHSVLLLSTWQ*WPKSSICLGSS
Trigger: GGAAGAGCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CAA 90 bp CCAAGACAAAAAGCAAAGCGACCCATTACCCACTCGGTTCTACTCTaGAGTACATGGCAGTTGTGGCCAAAGTCCTCCATCTGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: PRQKAKRPITHSVLL*STWQLWPKSSICLG
Trigger: GCCGAGGCAGATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCGCTTTGCTTTTTGTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS TCA 72 bp AAGCAGCAGCTAAGTCAGGGGATGAGAATGACGCAGTaGTGCCACTCACCATGGCCTGTTCGATCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: KQQLSQGMRMTQ*CHSPWPVRSCC
Trigger: ACAACAAGATCGAACAGGCCATGGTGAGTGGCATCACTGCGTCATTCTCATCCCCTGACTTAGCTGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503515.1
CDS CCA 72 bp GATGATGAGTGGGAGGGAGCCCAAGGAGAATCTTGGTaGAGAGATGGACACTGTCTTGGAAAAGCAGCTCTA +
Preference number: 6 (lower is better)
Translates to: DDEWEGAQGESW*RDGHCLGKAAL
Trigger: TAGAGCTGCTTTTCCAAGACAGTGTCCATCTCTCCACCAAGATTCTCCTTGGGCTCCCTCCCACTCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CAA 72 bp GGCTCTAGCGAATCCTGCCGCATTATGCTGTTGAGCTaGTCGGTATTGAGGTTCTCAAAGACCAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: GSSESCRIMLLS*SVLRFSKTSFS
Trigger: GGAAAAGCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAGCATAATGCGGCAGGATTCGCTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315660.8
ENST00000372383.9
ENST00000372384.6
ENST00000480691.2
ENST00000502650.1
ENST00000505965.1
ENST00000506081.5
ENST00000506724.1
ENST00000510887.5
ENST00000514426.1
ENST00000514897.5
CDS CAA 72 bp AAAGCAAAGCGACCCATTACCCACTCGGTTCTACTCTaGAGTACATGGCAGTTGTGGCCAAAGTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: KAKRPITHSVLL*STWQLWPKSSI
Trigger: GATGGAGGACTTTGGCCACAACTGCCATGTACTCAAGAGTAGAACCGAGTGGGTAATGGGTCGCTTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486554.1
CDS CAA 90 bp TGGGAGACTATAGACAGGAAGGCCACTGCCACTTACATAGTTACTTaGGTTTCATGGAAAATCCCCAAAGTCCAGAAGGAGGGAAGCAAG +
Preference number: 6 (lower is better)
Translates to: WETIDRKATATYIVT*VSWKIPKVQKEGSK
Trigger: CTTGCTTCCCTCCTTCTGGACTTTGGGGATTTTCCATGAAACCAAAGTAACTATGTAAGTGGCAGTGGCCTTCCTGTCTATAGTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS CCA 72 bp AAGGCCACTGCCACTTACATAGTTACTTTGGTTTCATaGAAAATCCCCAAAGTCCAGAAGGAGGGAAGCAAG +
Preference number: 6 (lower is better)
Translates to: KATATYIVTLVS*KIPKVQKEGSK
Trigger: CTTGCTTCCCTCCTTCTGGACTTTGGGGATTTTCCATGAAACCAAAGTAACTATGTAAGTGGCAGTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372382.8
CDS GCA 72 bp CACTCCAGTGTGGGAGACTATAGACAGGAAGGCCACTaGCACTTACATAGTTACTTTGGTTTCATGGAAAAT +
Preference number: 6 (lower is better)
Translates to: HSSVGDYRQEGH*HLHSYFGFMEN
Trigger: ATTTTCCATGAAACCAAAGTAACTATGTAAGTGGCAGTGGCCTTCCTGTCTATAGTCTCCCACACTGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372382.8