RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC22D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102804

Ensembl transcript IDs: ENST00000261489.6, ENST00000437455.2, ENST00000458659.3, ENST00000460842.5, ENST00000472477.1, ENST00000486464.1, ENST00000487881.2, ENST00000493016.1, ENST00000496314.1, ENST00000496838.1, ENST00000501704.3, ENST00000611198.4, ENST00000622051.1

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTCCTCAGGTGCCAGGGGCCAATCTGC +
Preference number: 1 (lower is better)
Translates to: THPIHLLAHVTPTAE*DPSGSLLRCQGPIC
Trigger: GCAGATTGGCCCCTGGCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR TCA 90 bp CCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAGGGATGGAAAGGCACACAGCTCCTG +
Preference number: 1 (lower is better)
Translates to: PCRTLSASRRENPWK*GVGSRKGWKGTQLL
Trigger: CAGGAGCTGTGTGCCTTTCCATCCCTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR TCA 90 bp AGAACTTGGGATTGGTCCAATTCCTACTGGGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCA +
Preference number: 1 (lower is better)
Translates to: RTWDWSNSYWAGGHC*GPRLIDYRAGKPTP
Trigger: TGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGCCCAGTAGGAATTGGACCAATCCCAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 90 bp CCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTaGTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: PRLIDYRAGKPTPFT*SLTLLLLQSGIPQA
Trigger: AGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 90 bp CTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATaGCCGTGTCACCACTTTATAACACATGCACGCTATCGAACAATT +
Preference number: 1 (lower is better)
Translates to: LLSAYGSEPSIISTG*PCHHFITHARYRTI
Trigger: AATTGTTCGATAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR TCA 90 bp TTCCCCCAAAATATCTTTATGACAACTGCTATCAGCCTATGGCAGTaGGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTAT +
Preference number: 1 (lower is better)
Translates to: FPQNIFMTTAISLWQ*AIHHFNRMPVSPLY
Trigger: ATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR CCA 90 bp TTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTaGATATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGACCCCTG +
Preference number: 1 (lower is better)
Translates to: LKEICLLSFPTLSRS*IFCLQGFSGESGPL
Trigger: CAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAATTTCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR TCA 90 bp CCTGAGCATGAATTAAACCATTTCTCAGATATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATGCTAATTCTCGGATTAACCTTTAAT +
Preference number: 1 (lower is better)
Translates to: PEHELNHFSDICQAA*GPGISMLILGLTFN
Trigger: ATTAAAGGTTAATCCGAGAATTAGCATGGATATACCGGGACCTCATGCAGCTTGGCAGATATCTGAGAAATGGTTTAATTCATGCTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGTGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAG +
Preference number: 2 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTENPWK*GVGSRK
Trigger: CTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTC...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGAT +
Preference number: 2 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTAGGHC*GPRLID
Trigger: ATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGC...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTC +
Preference number: 2 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFTPTAE*DPSGSL
Trigger: GAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 2 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAG +
Preference number: 2 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSENPWK*GVGSRK
Trigger: CTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCTTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 2 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTAATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 2 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 2 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 2 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTATTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 2 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTCTTAGAACTTGGGATTaGTCCAATTCCTACTGGGCA +
Preference number: 2 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFLRTWD*SNSYWA
Trigger: TGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAG...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGTCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSSSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 2 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVERYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGTGCAGAAACCCCTACTaGGAAATCCATTTCATTAGT +
Preference number: 2 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSCRNPY*EIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCA...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 2 (lower is better)
Translates to: ELSQELETHPTLGETSQPRYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 2 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 2 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLRYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 2 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGTCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR GCA 90 bp AACAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATGGATCCATTCACCACTaGCTTCCAAACTGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: NRYREPLLKERSLSSFLYGSIHH*LPNCRC
Trigger: GCACCTGCAGTTTGGAAGGCAGTGGTGAATGGATCC...ATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 2 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp GAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTCTTCTGAGGTGCTGGCATGTGTaGCAGATATCATCCATGAAG +
Preference number: 2 (lower is better)
Translates to: EPLLKERSLSSFLYFSLLRCWHV*QISSMK
Trigger: CTTCATGGATGATATCTGTCACACATGCCAGCACCT...CAGAAGACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR-3UTR CCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAACAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 2 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 2 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR TCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CCA 90 bp AACAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATACTCTCTCCAGAAGCTaGATATTCTGTCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: NRYREPLLKERSLSSFLYTLSRS*IFCLQG
Trigger: CCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGT...ATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR-3UTR TCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: SLFCKDLRQALELGIGPIVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR CAA 90 bp ACTTTTCCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATaGTTAACTTTACCTGGAAACAGTTGTGGAAATGACTGCCATTAT +
Preference number: 2 (lower is better)
Translates to: TFPIIPLPFRILLVK*LTLPGNSCGNDCHY
Trigger: ATAATGGCAGTCATTTCCACAACTGTTTCCAGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGGAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 72 bp ACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGG +
Preference number: 3 (lower is better)
Translates to: TAEWDPSGSLLR*QGPICLRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 3 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR TCA 72 bp GATTGGTCCAATTCCTACTGGGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGATTACAGAGCCGGTAAA +
Preference number: 3 (lower is better)
Translates to: DWSNSYWAGGHC*GPRLIDYRAGK
Trigger: TTTACCGGCTCTGTAATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGCCCAGTAGGAATTGGACCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 72 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTaGTCGCTCACGTTACTCCTACTGCAGAGTGGGATC +
Preference number: 3 (lower is better)
Translates to: IDYRAGKPTPFT*SLTLLLLQSGI
Trigger: GATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR CCA 72 bp CTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTACTGGGCAGGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: LVLQGLKTSLRT*DWSNSYWAGGH
Trigger: GTGGCCCCCTGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 3 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 72 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATaGCCGTGTCACCACTTTATAACACATGCACGCTAT +
Preference number: 3 (lower is better)
Translates to: AYGSEPSIISTG*PCHHFITHARY
Trigger: ATAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 3 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTTCTTTTTAGGGATCTaGGATGTCCCATTCACCTCT +
Preference number: 3 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFFFLGI*DVPFTS
Trigger: AGAGGTGAATGGGACATCCAAGATCCCTAAAAAGAA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATT +
Preference number: 3 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSNFRL*ILDLLI
Trigger: AATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 3 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTTGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: GETSQPRVTGFLKWKSASCVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAATGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVECVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 3 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRCVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp GAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTCTTCTGGTGGCTGGCTCATCCTaGTGTCTTCTAGACATATTG +
Preference number: 3 (lower is better)
Translates to: EPLLKERSLSSFLYFSLLVAGSS*CLLDIL
Trigger: CAATATGTCTAGAAGACACAAGGATGAGCCAGCCAC...CAGAAGACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR TCA 72 bp AATATCTTTATGACAACTGCTATCAGCCTATGGCAGTaGGCCATCCATCATTTCAACAGGATGCCCGTGTCA +
Preference number: 3 (lower is better)
Translates to: NIFMTTAISLWQ*AIHHFNRMPVS
Trigger: TGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 3 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR TCA 72 bp GAATTAAACCATTTCTCAGATATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATGCTAATTCTCGGATTA +
Preference number: 3 (lower is better)
Translates to: ELNHFSDICQAA*GPGISMLILGL
Trigger: TAATCCGAGAATTAGCATGGATATACCGGGACCTCATGCAGCTTGGCAGATATCTGAGAAATGGTTTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 72 bp TTTATAGTCATGCAGAATCAACTGCAAGGACATCCTTaGTCATCTGGTCCCACCTCAAATCATCTTTTGCTT +
Preference number: 3 (lower is better)
Translates to: FIVMQNQLQGHP*SSGPTSNHLLL
Trigger: AAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR CCA 72 bp ATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTaGATATTCTGTCTCCAAGGGTTCAGTGGAGAAAGT +
Preference number: 3 (lower is better)
Translates to: ICLLSFPTLSRS*IFCLQGFSGES
Trigger: ACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR-3UTR CAA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 3 (lower is better)
Translates to: SLFCKDLRQALELGIGPIIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR-3UTR CAA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
3UTR GCA 72 bp CAGAAACATATGCATATAACTACTATACAGGTGATATaGAGAAACCCCTACTGGGAAATCCATTTCATTAGT +
Preference number: 3 (lower is better)
Translates to: QKHMHITTIQVI*RNPYWEIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGTAGTTATATGCATATGTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTGTGTGGTGCCCTGTaGCTGGGTGGTGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSLCGAL*LGGGRG
Trigger: CCCCCTGCCACCACCCAGCCACAGGGCACCACACAG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCGTCTGCAGCTGGGCCTaGAACTGGGCAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCVCSWA*NWASCS
Trigger: TGAGCAGCTTGCCCAGTTTCAGGCCCAGCTGCAGAC...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCGACTCAGGCGGCTGGTaGATTGTGTTGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCDSGGW*IVLGTG
Trigger: CCCGGTACCCAACACAATGCACCAGCCGCCTGAGTC...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTATGCGGTTGGTCCTaGGCCCTGCGATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSLCGWS*ALRCWL
Trigger: CAGCCAGCATCGCAGGGCTCAGGACCAACCGCATAG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLGSLLR*QGPICL
Trigger: GAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCC...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAGGCGCCGGTCGCTCCTaGCTTCGAGAGCGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSGAGRS*LRERAS
Trigger: CGAAGCTCGCTCTCGAAGGCAGGAGCGACCGGCGCC...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCACCCTCCCGGCCGCTCTaGACGGAGGCAGCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSPSRPL*TEAAPS
Trigger: GCTTGGCGCTGCCTCCGTGCAGAGCGGCCGGGAGGG...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501704.3
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCCCTGCAGGTTGTGCTaGGACTGCTGTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSPCRLC*DCCGLH
Trigger: GTGCAGCCCACAGCAGTCCCAGCACAACCTGCAGGG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAGCCTGGCCAACAGGCTaGACAGATGCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLAWPTG*TDAPAG
Trigger: ACCTGCAGGGGCATCTGTCCAGCCTGTTGGCCAGGC...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCGACGCCGGTACCTGCTaGATTGAGAGCAGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSDAGTC*IESRGA
Trigger: AGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTC...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTACTGGTTGGGAGAGACTaGCCCAGGTGTCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLLVGRD*PRCLGF
Trigger: GAAGCCGAGACACCTGGGGCAGTCTCTCCCAACCAG...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCAGGTACAGCAGACACTaGTGCCGGAGCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSRYSRH*CRSLAN
Trigger: GTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTGTGTGGTGCCCTGTaGCTGGGTGGTGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLLCGAL*LGGGRG
Trigger: CCCCCTGCCACCACCCAGCCACAGGGCACCACACAG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGCTGGTGCATTGTGTTaGGTACCGGGGGCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTAGALC*VPGARR
Trigger: CCTCCGCGCCCCCGGTACCCAACACAATGCACCAGC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTAGAGGATGAACGAGGGTaGACAGGGCGGCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLEDERG*TGRPGT
Trigger: GGTCCCCGGCCGCCCTGTTCACCCTCGTTCATCCTC...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTGTGTGGTGCCCTGTaGCTGGGTGGTGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLLCGAL*LGGGRG
Trigger: CCCCCTGCCACCACCCAGCCACAGGGCACCACACAG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACCTGTGTGGTGCCCTGTaGCTGGGTGGTGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNLCGAL*LGGGRG
Trigger: CCCCCTGCCACCACCCAGCCACAGGGCACCACACAG...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCGTGGACTCAGGCGGCTaGTGCATTGTGTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSVDSGG*CIVLGT
Trigger: GGTACCCAACACAATGCACCAGCCGCCTGAGTCCAC...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCCATTTGAGTTCCGCCTaGCGCAAGAGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLHLSSA*RKRLCL
Trigger: CAGGCACAGCCTCTTGCGCCAGGCGGAACTCAAATG...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKENPWK*GVGSRK
Trigger: CTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTC...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGAT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFAGGHC*GPRLID
Trigger: ATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGAT +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTAGGHC*GPRLID
Trigger: ATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCGGCTGTGCCTGCAGCTaGGCCTGCGAAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLGCACS*ACERRF
Trigger: GAACCTCCTTTCGCAGGCTCAGCTGCAGGCACAGCC...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCTGGCTTCCAATTGCCTaGGCTAATGATTGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCWLPIA*ANDCAE
Trigger: CTCCGCACAATCATTAGCTCAGGCAATTGGAAGCCA...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACAGATGCGGATCCCAGTaGCGTGAAGAGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHRCGSQ*REEALP
Trigger: GGGAAGCGCCTCTTCACGGCACTGGGATCCGCATCT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCATGATCCCAGGCAGATaGGGATCCCAGTGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSMIPGR*GSQCRE
Trigger: TTCACGGCACTGGGATCCGCATCTGCCTGGGATCAT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTACGCGGAGGAGACGAGTaGAATTTCCTTCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLRGGDE*NFLLHR
Trigger: ACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCG...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACACCGACGCCGGTACCTaGTGCATTGAGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHTDAGT*CIESRG
Trigger: GCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGGCTGTGTCCCGCGGCTaGTTAACGGCGAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKAVSRG*LTAKAS
Trigger: GGAAGCTTTCGCCGTTAAGCAGCCGCGGGACACAGC...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622051.1
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGCTGGTGCATTGTGTTaGGTACCGGGGGCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASAGALC*VPGARR
Trigger: CCTCCGCGCCCCCGGTACCCAACACAATGCACCAGC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFEVQAL*RRRLWS
Trigger: GGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCTTTACAGGCGATGGCTaGATACCAGTTGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCFTGDG*IPVAAL
Trigger: GAGTGCTGCAACTGGTATCCAGCCATCGCCTGTAAA...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGCTCCGCTGCACGCCTaGCATCTTCAATTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLAPLHA*HLQFGF
Trigger: GAAGCCAAATTGAAGATGCCAGGCGTGCAGCGGAGC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACGGATCCCAGTGCCGTaGAGAGGCGCTTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLRIPVP*RGASQI
Trigger: GATCTGGGAAGCGCCTCTTCACGGCACTGGGATCCG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCTATGCGGTTGGTCCTaGGCCCTGCGATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASLCGWS*ALRCWL
Trigger: CAGCCAGCATCGCAGGGCTCAGGACCAACCGCATAG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAACTATGCGGTTGGTCCTaGGCCCTGCGATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVELCGWS*ALRCWL
Trigger: CAGCCAGCATCGCAGGGCTCAGGACCAACCGCATAG...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCATCAGCCTATGGCAGTaGGCCATCCATCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCISLWQ*AIHHFN
Trigger: GTTGAAATGATGGATGGCTCACTGCCATAGGCTGAT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGAGGAAAACGGGACCTaGCGCTCCGCCTGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSEENGT*RSAWRD
Trigger: ATCGCGCCAGGCGGAGCGTCAGGTCCCGTTTTCCTC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTAGGCTGTGCCTGCAGCTaGGCCTGCGAAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLGCACS*ACERRF
Trigger: GAACCTCCTTTCGCAGGCTCAGCTGCAGGCACAGCC...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTCTAGATACTGGGCTTaGGGGTGGCCCACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSSRYWA*GWPTSN
Trigger: ATTACTGGTGGGCCACCCTCAAGCCCAGTATCTAGA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAGACACTACTGCTCACTaGACTCCCACTAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLDTTAH*TPTSAL
Trigger: GAGAGCACTAGTGGGAGTTCAGTGAGCAGTAGTGTC...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTGSLLR*QGPICL
Trigger: GAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCC...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCCCACCCCATTCACTTaGTCGCTCACGTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSPTPFT*SLTLLL
Trigger: TAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGGCGCCGGTCGCTCCTaGCTTCGAGAGCGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLGAGRS*LRERAS
Trigger: CGAAGCTCGCTCTCGAAGGCAGGAGCGACCGGCGCC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGGGAACATTGCCGGGTaGGCCATCTTCCTAGCGCTA +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTGNIAG*AIFLAL
Trigger: TAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCCCCACCAGTAATGGATaGACTGGCCACAGCAACATG +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLPTSNG*TGHSNM
Trigger: CATGTTGCTGTGGCCAGTGCATCCATTACTGGTGGG...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCATGTTGCTGCTGCTGCTaGTGCACCACCACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSCCCCC*CTTTVG
Trigger: CCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACA...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTGTTGCTGCTGCTGCTaGTGCACCACCACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFCCCCC*CTTTVG
Trigger: CCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSTPTAE*DPSGSL
Trigger: GAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCAATCCTCGGAAGATGTaGCATTACTACCGACGCCGG +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSNPRKM*HYYRRR
Trigger: CCGGCGTCGGTAGTAATGCCACATCTTCCGAGGATT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGCATTTGAGTTCCGCCTaGCGCAAGAGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTHLSSA*RKRLCL
Trigger: CAGGCACAGCCTCTTGCGCCAGGCGGAACTCAAATG...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCGTGATGGAGGTGGTGTaGATGAGCATTCCCATTGAT +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCVMEVV*MSIPID
Trigger: ATCAATGGGAATGCTCATCCACACCACCTCCATCAC...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCCCAAAATCCATCTGTTaGAGGGTCACACCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCPKSIC*RVTPWR
Trigger: TCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGG...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAGGGGTTGAGCCAAACTaGAAATGGAAGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLGVEPN*KWKAAD
Trigger: GTCAGCAGCCTTCCATTTCCAGTTTGGCTCAACCCC...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAGGGTGGTGGTGCCCCTaGAAGGGGAGTTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSGWWCP*KGSLHW
Trigger: CCAGTGCAAACTCCCCTTCCAGGGGCACCACCACCC...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCCCCAGTTTGAGCAGGTaGAACCACTTGCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLPSLSR*NHLRRW
Trigger: CCATCTTCGCAAGTGGTTCCACCTGCTCAAACTGGG...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATATTCTGCTTCACGTaGGGTGCGGGGCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFIFCFT*GAGQEG
Trigger: TCCCTCCTGCCCCGCACCCCACGTGAAGCAGAATAT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501704.3
CDS-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTAGTCTGCAGCTGGGCCTaGAACTGGGCAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLVCSWA*NWASCS
Trigger: TGAGCAGCTTGCCCAGTTTCAGGCCCAGCTGCAGAC...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGAT +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASAGGHC*GPRLID
Trigger: ATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGGAGGAGCACCCTGCTaGATAACTGAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTGGAPC*ITEGGT
Trigger: GGTTCCACCTTCAGTTATTCAGCAGGGTGCTCCTCC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCTGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRGSLLR*QGPICL
Trigger: GAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSGSLLR*QGPICL
Trigger: GAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACCGCTGCCACTACCGCTaGCCCTTCGAGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNRCHYR*PFEGTL
Trigger: CAATGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCG...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGACGCCGGTACCTGCTaGATTGAGAGCAGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASDAGTC*IESRGA
Trigger: AGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTGGTTGGGAGAGACTaGCCCAGGTGTCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTLVGRD*PRCLGF
Trigger: GAAGCCGAGACACCTGGGGCAGTCTCTCCCAACCAG...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACTGCTGCTGCTGCTGCTaGACCACCACAGTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNCCCCC*TTTVGA
Trigger: AGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCA...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTGGCTGGATACCAGTTaGAGCACTCATAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSWLDTS*STHSGL
Trigger: CAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGAGGTTGTGCTGGGACTaGTGTGGGCTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTRLCWD*CGLHWQ
Trigger: CTGCCAGTGCAGCCCACAGCAGTCCCAGCACAACCT...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAATACAGCAGACACTGCTaGCGGAGCCTGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVEYSRHC*RSLANR
Trigger: CCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTA...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTEVQAL*RRRLWS
Trigger: GGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTC...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTACTGAAGGTGGAACCTaGGTAGAGGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFTEGGT*VEGCCT
Trigger: AGTGCAGCAGCCCTCTACCCAGGTTCCACCTTCAGT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAAACCACTTGCGAAGATaGAGGAGCACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLNHLRR*RSTLLN
Trigger: ATTCAGCAGGGTGCTCCTCCATCTTCGCAAGTGGTT...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGTCTGCAGCTGGGCCTaGAACTGGGCAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRVCSWA*NWASCS
Trigger: TGAGCAGCTTGCCCAGTTTCAGGCCCAGCTGCAGAC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRENPWK*GVGSRK
Trigger: CTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGAGGATGAACGAGGGTaGACAGGGCGGCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAEDERG*TGRPGT
Trigger: GGTCCCCGGCCGCCCTGTTCACCCTCGTTCATCCTC...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTGAGGAAAACGGGACCTaGCGCTCCGCCTGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIEENGT*RSAWRD
Trigger: ATCGCGCCAGGCGGAGCGTCAGGTCCCGTTTTCCTC...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGAGTAGCCCTGGAAAGTaGCACATCAAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSSSPGK*HIKDLR
Trigger: TCGGAGATCCTTGATGTGTCACTTTCCAGGGCTACT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGTTGGTTGTTGCTGCTaGCTTGAAACCGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTVGCCC*LETDPP
Trigger: TGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAAC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTGGATACCCTGTGGCTaGGCCACAGGAATCACTGTT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFWIPCG*ATGITV
Trigger: AACAGTGATTCCTGTGGCTCAGCCACAGGGTATCCA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCTCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTATGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGGCTCACTCCTCAGGTaGCAGGGGCCAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLGSLLR*QGPICL
Trigger: GAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAGCC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGCCCACCCCATTCACTTaGTCGCTCACGTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKPTPFT*SLTLLL
Trigger: TAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGG...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCGCTA +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSGNIAG*AIFLAL
Trigger: TAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCC...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGCCCACCAGTAATGGATaGACTGGCCACAGCAACATG +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTPTSNG*TGHSNM
Trigger: CATGTTGCTGTGGCCAGTGCATCCATTACTGGTGGG...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTCCCCCAGTCATCCCTaGAGCTGCATTAGGAACACT +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKSPSHP*SCIRNT
Trigger: AGTGTTCCTAATGCAGCTGCAGGGATGACTGGGGGA...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTCCCCCAGTCATCCCTaGAGCTGCATTAGGAACACT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSPSHP*SCIRNT
Trigger: AGTGTTCCTAATGCAGCTGCAGGGATGACTGGGGGA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTGTTGTTGTTGCTGCTaGTGCTGCTGCACCACCACA +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFCCCCC*CCCTTT
Trigger: TGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTGCCCCTGCAGGTTGTaGTGGGACTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQCPCRL*WDCCGL
Trigger: CAGCCCACAGCAGTCCCAGCACAACCTGCAGGGGCA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGACTGGACAGATGCCCCTaGAGGTTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRLDRCP*RLCWDC
Trigger: GCAGTCCCAGCACAACCTGCAGGGGCATCTGTCCAG...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCACAAGCTGCTCAGGACTaGCCAGTGTCTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSQAAQD*PVSSAD
Trigger: ATCTGCTGAAGACACTGGCCAGTCCTGAGCAGCTTG...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTGGAGGGTCACACCTTaGAGAGCTGGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFWRVTP*RAGCCC
Trigger: ACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCTCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCSSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTTGGTGCAACTGGTGTaGTACTGTCAGAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKLVQLV*YCQSFQ
Trigger: CTGGAAGCTCTGACAGTATCACACCAGTTGCACCAA...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTGTTGCTGCTGACTTaGAACCGATCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTLLLLT*NRSPSH
Trigger: ATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAA...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTCCAGAAGGACCAGTTaGACTAACCTGACTTGTAAC +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSSRRTS*TNLTCN
Trigger: GTTACAAGTCAGGTTAGTTCAACTGGTCCTTCTGGA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLSRLFS*SSWEFF
Trigger: GAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCT...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCCCACCCCATTCACTTaGTCGCTCACGTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLPTPFT*SLTLLL
Trigger: TAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCGCTCTCAGTGTCCTCTaGTATACTGTTGTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSALSVL*YTVVRA
Trigger: AGCTCTAACAACAGTATAGCAGAGGACACTGAGAGC...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTGGGTAGAGGGCTGCTaGACTGCAGTAGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHWVEGC*TAVGMF
Trigger: AAACATACCTACTGCAGTGCAGCAGCCCTCTACCCA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCAGAGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLQRLLG*CYSHLK
Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCTCTG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTPTAE*DPSGSL
Trigger: GAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCCTTAGAACTTGGGATTaGTCCAATTCCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLLRTWD*SNSYWA
Trigger: TGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAG...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCAATCCTCGGAAGATGTaGCATTACTACCGACGCCGG +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLNPRKM*HYYRRR
Trigger: CCGGCGTCGGTAGTAATGCCACATCTTCCGAGGATT...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCAGAAGTTGGTGCAACTaGTGTGATACTGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSRSWCN*CDTVRA
Trigger: AGCTCTGACAGTATCACACCAGTTGCACCAACTTCT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCAGAAGTTGGTGCAACTaGTGTGATACTGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLRSWCN*CDTVRA
Trigger: AGCTCTGACAGTATCACACCAGTTGCACCAACTTCT...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTCACATTTACAGGCGATaGCTGGATACCAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFHIYRR*LDTSCS
Trigger: GCTGCAACTGGTATCCAGCCATCGCCTGTAAATGTG...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCAAGGGGAGTTTGCACTaGAGGAGCCGCCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLKGSLH*RSRLRI
Trigger: TATTCTCAGGCGGCTCCTCCAGTGCAAACTCCCCTT...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTGCTGTGGGCTGCACTaGCAGCTGGATACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQCCGLH*QLDTLW
Trigger: CCACAGGGTATCCAGCTGCCAGTGCAGCCCACAGCA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTTGTTGAGGAAGGCTTaGAGCACTAGTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSLLRKA*STSLNS
Trigger: GGAGTTCAAACTAGTGCTCCAAGCCTTCCTCAACAA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGCGCTACAGACTATGGTaGCTTTCTTGGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKRYRLW*LSWASL
Trigger: AAGAGAGGCCCAAGAAAGCCACCATAGTCTGTAGCG...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611198.4
CDS-3UTR CCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTCACGCTACAGACTATaGTGGCTTTCTTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKSRYRL*WLSWAS
Trigger: AGAGGCCCAAGAAAGCCACCATAGTCTGTAGCGTGA...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611198.4
CDS-3UTR TCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTGAGAGGCGAGTCCAGTaGGGAGCTCCATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIERRVQ*GAPSLH
Trigger: GTGAAGCGATGGAGCTCCTCACTGGACTCGCCTCTC...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGATCAGCCTATGGCAGTaGGCCATCCATCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTISLWQ*AIHHFN
Trigger: GTTGAAATGATGGATGGCTCACTGCCATAGGCTGAT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACATACTAGCGGAGATCTaGGCAGGAGTAACGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHILAEI*AGVTLV
Trigger: AACTAGCGTTACTCCTGCTCAGATCTCCGCTAGTAT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATACTAGCGGAGATCTaGGCAGGAGTAACGCTAGTT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFILAEI*AGVTLV
Trigger: AACTAGCGTTACTCCTGCTCAGATCTCCGCTAGTAT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACGACACTACTGCTCACTaGACTCCCACTAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNDTTAH*TPTSAL
Trigger: GAGAGCACTAGTGGGAGTTCAGTGAGCAGTAGTGTC...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTCACCACTGATAGTCTaGGGTAAGCCAACTAAGGAG +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFSPLIV*GKPTKE
Trigger: CTCCTTAGTTGGCTTACCTCAGACTATCAGTGGTGA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCATTAGTTCTTTGATTTaGTCTTTGAGGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCISSLI*SLRTST
Trigger: AGTGGAGGTCCTCAAAGAGCAAATCAAAGAACTAAT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSSRLFS*SSWEFF
Trigger: GAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCTGCAAGGACATCCTTaGTCATCTGGTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASLQGHP*SSGPTS
Trigger: TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACCTGCAAGGACATCCTTaGTCATCTGGTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNLQGHP*SSGPTS
Trigger: TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTGCAAGGACATCCTTaGTCATCTGGTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLLQGHP*SSGPTS
Trigger: TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTATGCCAGGGGCCAATCTaGCTCAGGATTCCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLCQGPI*LRIPSW
Trigger: CCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCA...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACCCACCCCATTCACTTaGTCGCTCACGTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLPTPFT*SLTLLL
Trigger: TAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCACGCGGAGGAGACGAGTaGAATTTCCTTCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSRGGDE*NFLLHR
Trigger: ACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCG...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTCGCTGCCACTACCGCTaGCCCTTCGAGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIRCHYR*PFEGTL
Trigger: CAATGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCG...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTACCGACGCCGGTACCTaGTGCATTGAGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPITDAGT*CIESRG
Trigger: GCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAAGTCATCCCTGCAGCTaGATTAGGAACACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSSHPCS*IRNTAN
Trigger: GTTAGCAGTGTTCCTAATGCAGCTGCAGGGATGACT...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACTGTTGTTGCTGCTGCTaGTGCTGCACCACCACAGTA +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNCCCCC*CCTTTV
Trigger: TACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACA...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCAAGCTGCTCAGGACTaGCCAGTGTCTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASQAAQD*PVSSAD
Trigger: ATCTGCTGAAGACACTGGCCAGTCCTGAGCAGCTTG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAGTGGACTCAGGCGGCTaGTGCATTGTGTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLVDSGG*CIVLGT
Trigger: GGTACCCAACACAATGCACCAGCCGCCTGAGTCCAC...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACGGTGTCTCGGCTTCCTaGAAGTTATTTAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHGVSAS*KLFRVS
Trigger: AGAGACCCTAAATAACTTCCAGGAAGCCGAGACACC...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGTGATGGAGGTGGTGTaGATGAGCATTCCCATTGAT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFVMEVV*MSIPID
Trigger: ATCAATGGGAATGCTCATCCACACCACCTCCATCAC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACACCTTGGAGAGCTaGTTGTTGCTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHHTLES*LLLLLL
Trigger: CAACAACAACAGCAACAACCAGCTCTCCAAGGTGTG...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGGAGCCAAACTGGAAATaGAAGGCTGCTGACCTAAAG +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKEPNWK*KAADLK
Trigger: CTTTAGGTCAGCAGCCTTCCATTTCCAGTTTGGCTC...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGACCATACTGTAACTGTTaGGGTGGTGGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRPYCNC*GGGAPG
Trigger: TCCAGGGGCACCACCACCCCAACAGTTACAGTATGG...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGACAGCTGGATACCCTGTaGCTGAGCCACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRQLDTL*LSHRNH
Trigger: GTGATTCCTGTGGCTCAGCCACAGGGTATCCAGCTG...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
3UTR CAA 72 bp CAGGTGGCTGGCTCATCCTTGTGTCTTCTAGACATATaGCATGGATCCATTCACCACTGCCTTCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: QVAGSSLCLLDI*HGSIHHCLPNC
Trigger: GCAGTTTGGAAGGCAGTGGTGAATGGATCCATGCAATATGTCTAGAAGACACAAGGATGAGCCAGCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAGTCTGCAGCTGGGCCTaGAACTGGGCAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKVCSWA*NWASCS
Trigger: TGAGCAGCTTGCCCAGTTTCAGGCCCAGCTGCAGAC...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCAGGGGGCCACTGCTaGGGCCCTAGGTTGATAGAT +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAAGGHC*GPRLID
Trigger: ATCTATCAACCTAGGGCCTCAGCAGTGGCCCCCTGC...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTAGTAGCCCTGGAAAGTaGCACATCAAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASSSPGK*HIKDLR
Trigger: TCGGAGATCCTTGATGTGTCACTTTCCAGGGCTACT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGTTGGTGCAACTGGTGTaGTACTGTCAGAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTLVQLV*YCQSFQ
Trigger: CTGGAAGCTCTGACAGTATCACACCAGTTGCACCAA...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACTTGTTGCTGCTGACTTaGAACCGATCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNLLLLT*NRSPSH
Trigger: ATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAA...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAGGATTTTGAGTCACTaGTTTGACATGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSRILSH*FDMAWG
Trigger: GCCCCAGGCCATGTCAAATCAGTGACTCAAAATCCT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACCCTGCTGAATAACTaGAGGTGGAACCTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTLLNN*RWNLGR
Trigger: TCTACCCAGGTTCCACCTTCAGTTATTCAGCAGGGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIPSREH*RVRHLP
Trigger: AGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGG...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATGTTGTTGCTGCTGCTaGTGCTGCACCACCACAGTA +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRCCCCC*CCTTTV
Trigger: TACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAACCTGGGTAGAGGGCTaGTGCACTGCAGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLTWVEG*CTAVGM
Trigger: CATACCTACTGCAGTGCAGCAGCCCTCTACCCAGGT...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACCAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCTGCAGAAACCCCTACTaGGAAATCCATTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLCRNPY*EIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCA...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTATGCAGAAACCCCTACTaGGAAATCCATTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLCRNPY*EIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCA...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQTPTAE*DPSGSL
Trigger: GAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAACTCCTACTGCAGAGTaGGATCCCTCAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLTPTAE*DPSGSL
Trigger: GAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGT...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACATGCAGGTGAACCACTaGATGATACAGCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHMQVNH*MIQQKL
Trigger: CAACTTCTGCTGTATCATCCAGTGGTTCACCTGCAT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCATGGAGGGTCACACCTTaGAGAGCTGGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSWRVTP*RAGCCC
Trigger: ACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCA...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGTCACTGATTTGACATaGCCTGGGGCCATCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASVTDLT*PGAICV
Trigger: TACACAGATGGCCCCAGGCCATGTCAAATCAGTGAC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTGCAGGTGCTGGCATGTGTGACAGATATCATCCATGAAGGCTCTGCTAGAAGAACAAGATCAGGTGGCTaGCTCATCCTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQVLACVTDIIHEGSARRTRSGG*LILVSS
Trigger: AGAAGACACAAGGATGAGCCAGCCACCTGATCTTGT...TCTTCTAGCAGAGCCTTCATGGATGATATCTGTCACACATGCCAGCACCTGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTCTATGCGGTTGGTCCTaGGCCCTGCGATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPLCGWS*ALRCWL
Trigger: CAGCCAGCATCGCAGGGCTCAGGACCAACCGCATAG...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTACCCAAAATATCTTTATaGCAACTGCTATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLPKISL*QLLSAY
Trigger: ATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGG...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCTTTGAGTCACTGATTTaGCATGGCCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ELSQELETHPTLGETSQPFESLI*HGLGPS
Trigger: AGATGGCCCCAGGCCATGTCAAATCAGTGACTCAAA...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTGTGAAACAATTCCTTaGGCTACTGGTTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKCETIP*ATGSTP
Trigger: AGGAGTAGAACCAGTAGCTCAAGGAATTGTTTCACA...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTTGCAGGCAACTGCTGTaGAACAATTCCTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASCRQLL*NNSLSY
Trigger: GTAGCTCAAGGAATTGTTTCACAGCAGTTGCCTGCA...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp TTATCCTTTCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTTGGCTTCCAATTGCCTaGGCTAATGATTGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LSFPTLSRSWIFCLQGFSWLPIA*ANDCAE
Trigger: CTCCGCACAATCATTAGCTCAGGCAATTGGAAGCCA...ACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp GGCTGGCTCATCCTTGTGTCTTCTAGACATATTGCATGGATCCATTCACCACTGGTAGGAGAGAAGCACTaGAATAGAGAGCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GWLILVSSRHIAWIHSPLVGEKH*NRELSS
Trigger: GGATGAGAGCTCTCTATTTCAGTGCTTCTCTCCTAC...CAGTGGTGAATGGATCCATGCAATATGTCTAGAAGACACAAGGATGAGCCAGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR GCA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCATTAGTTCTTTGATTTaGTCTTTGAGGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLISSLI*SLRTST
Trigger: AGTGGAGGTCCTCAAAGAGCAAATCAAAGAACTAAT...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLSRLFS*SSWEFF
Trigger: GAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCT...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASRYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTACTGCAAGGACATCCTTaGTCATCTGGTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLLQGHP*SSGPTS
Trigger: TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCACCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAPSREH*RVRHLP
Trigger: AGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGG...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCTACAGCAGAAGTTGGTaGAACTGGTGTGATACTGTC +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLYSRSW*NWCDTV
Trigger: GACAGTATCACACCAGTTGCACCAACTTCTGCTGTA...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGTGCTGCTGCTGCTGCTaGACCACCACAGTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQCCCCC*TTTVGA
Trigger: AGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCA...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACAATAGCTACCACACTTaGACCAGAGGAGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNNSYHT*TRGALI
Trigger: GATGAGAGCTCCTCTGGTGCAAGTGTGGTAGCTATT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGTTCTCCTGCTCCAGCTaGGAATTTTTCTCTATTAGT +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSFSCSS*EFFSIS
Trigger: ACTAATAGAGAAAAATTCCCAGCTGGAGCAGGAGAA...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTACAAGCTGCTCAGGACTaGCCAGTGTCTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLQAAQD*PVSSAD
Trigger: ATCTGCTGAAGACACTGGCCAGTCCTGAGCAGCTTG...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTTAGAACTTGGGATTaGTCCAATTCCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLLRTWD*SNSYWA
Trigger: TGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp TTATCCTTTCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTGTCAAAAGCTCTCCGTaGTCTTGGCTGTATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFPTLSRSWIFCLQGFSVKSSP*SWLYLW
Trigger: CCACAGATACAGCCAAGACCACGGAGAGCTTTTGAC...ACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp GGCTCATCCTTGTGTCTTCTAGACATATTGCATGGATCCATTCACCACTGCCTTGTTCAGTGGAGAAAGTaGACCCCTGACGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GSSLCLLDILHGSIHHCLVQWRK*TPDVKS
Trigger: GCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAAC...AAGGCAGTGGTGAATGGATCCATGCAATATGTCTAGAAGACACAAGGATGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTGGTATACTAACTGCTaGAATACTCTGTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHWYTNC*NTLWTS
Trigger: ACTGGTCCACAGAGTATTCCAGCAGTTAGTATACCA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGACTGCTGCCGGAGCCTaGCCAACAGGCTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQTAAGA*PTGWTD
Trigger: ATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CTGCAGGTGCTGGCATGTGTGACAGATATCATCCATGAAGGCTCTGCTAGAAGAGATTGTGCGGAGAACTaGGTAGAACTTAGTGGTATC +
Preference number: 4 (lower is better)
Translates to: LQVLACVTDIIHEGSARRDCAEN*VELSGI
Trigger: GATACCACTAAGTTCTACCCAGTTCTCCGCACAATC...TCTTCTAGCAGAGCCTTCATGGATGATATCTGTCACACATGCCAGCACCTGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGAGAACCCTTGGAAGTaGGGGGTAGGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPENPWK*GVGSRK
Trigger: CTTCCGGCTCCCTACCCCTCACTTCCAAGGGTTCTC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGTTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAATCAGCCTATGGCAGTaGGCCATCCATCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSISLWQ*AIHHFN
Trigger: GTTGAAATGATGGATGGCTCACTGCCATAGGCTGAT...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAACTTTTCTTTTTCATTTaGGTTCCGCCTGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVELFFFI*VPPGAR
Trigger: TCTTGCGCCAGGCGGAACTCAAATGAAAAAGAAAAG...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGACTGGAGGAGCCGCCTaGGAATATGGTAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQTGGAA*EYGSWG
Trigger: ACCCCAGCTACCATATTCTCAGGCGGCTCCTCCAGT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACGAGGACATTGCTGTTTaGAGAATTGGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNEDIAV*RIGCCC
Trigger: ACAACAGCAGCCAATTCTTCAAACAGCAATGTCCTC...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGCAATAACCAATTGTTaGGGAAGGCTTGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASAITNC*GRLGAL
Trigger: TAGTGCTCCAAGCCTTCCTCAACAATTGGTTATTGC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGGGGATTTCATGCAATTaGAGCCAAAAACACCCTCGT +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTGISCN*SQKHPR
Trigger: ACGAGGGTGTTTTTGGCTGCAATTGCATGAAATCCC...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACAGTTGTGGAAATGACTaGCATTATGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSCGND*HYVNRV
Trigger: GACCCTGTTAACATAATGGCAGTCATTTCCACAACT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGAGTTGTGGAAATGACTaGCATTATGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKSCGND*HYVNRV
Trigger: GACCCTGTTAACATAATGGCAGTCATTTCCACAACT...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAAGTTGTGGAAATGACTaGCATTATGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSSCGND*HYVNRV
Trigger: GACCCTGTTAACATAATGGCAGTCATTTCCACAACT...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATCATTTCAACAGGATaGCCGTGTCACCACTTTATA +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFIISTG*PCHHFI
Trigger: TATAAAGTGGTGACACGGGCATCCTGTTGAAATGAT...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGATCATTTCAACAGGATaGCCGTGTCACCACTTTATA +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKIISTG*PCHHFI
Trigger: TATAAAGTGGTGACACGGGCATCCTGTTGAAATGAT...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTATCACAAATATTCAGCTaGCAAAATTTCATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLSQIFS*QNFMSL
Trigger: GAGACTCATGAAATTTTGGCAGCTGAATATTTGTGA...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTCTTCTGGGATCCATTCACCACTaGCTTCCAAACTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EPLLKERSLSSFLYFSLLGSIHH*LPNCRC
Trigger: GCACCTGCAGTTTGGAAGGCAGTGGTGAATGGATCC...CAGAAGACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR GCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGACTCAGGCGGCTGGTaGATTGTGTTGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPDSGGW*IVLGTG
Trigger: CCCGGTACCCAACACAATGCACCAGCCGCCTGAGTC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTATACAGCAGAAGTTGGTaGAACTGGTGTGATACTGTC +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLYSRSW*NWCDTV
Trigger: GACAGTATCACACCAGTTGCACCAACTTCTGCTGTA...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCTGTGGTATACTAACTaGTGGAATACTCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASLWYTN*WNTLWT
Trigger: GGTCCACAGAGTATTCCAGCAGTTAGTATACCACAG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACGGTAGCAGGGGTTTGTaGTATATTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNGSRGL*YILWWN
Trigger: GTTCCACCACAAAATATAGCACAAACCCCTGCTACC...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAAATAGCTACCACACTTaGACCAGAGGAGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRNSYHT*TRGEQD
Trigger: ATCCTGCTCTCCTCTGGTGCAAGTGTGGTAGCTATT...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611198.4
CDS-3UTR CCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: FTTPCRTLSASRRENPWKTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLTSLRT*DWSNSY
Trigger: GTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGT...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCACAACATTCTGTTGTaGAAGGTGAGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASHNILL*KVRQMR
Trigger: CCTCATTTGCCTCACCTTCCACAACAGAATGTTGTG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCACACACCTTGGAGAGCTaGTTGTTGCTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSHTLES*LLLLLL
Trigger: CAACAACAACAGCAACAACCAGCTCTCCAAGGTGTG...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGACCAAAATCCATCTGTTaGAGGGTCACACCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRPKSIC*RVTPWR
Trigger: TCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGG...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAGATTGTGCGGAGAACTaGGTAGAACTTAGTGGTATC +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSDCAEN*VELSGI
Trigger: GATACCACTAAGTTCTACCCAGTTCTCCGCACAATC...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTGCTCCGCTGCACGCCTaGCATCTTCAATTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QIQRAAFKRKESLKLPLFAPLHA*HLQFGF
Trigger: GAAGCCAAATTGAAGATGCCAGGCGTGCAGCGGAGC...AAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR CAA 72 bp CACATGCACGCTATCGAACAATTCTTTTTAGGGATCTaGGATGTCCCATTCACCTCTCAATCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: HMHAIEQFFLGI*DVPFTSQSPTS
Trigger: GCTGGTGGGAGATTGAGAGGTGAATGGGACATCCAAGATCCCTAAAAAGAATTGTTCGATAGCGTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGATCAGCCTATGGCAGTaGGCCATCCATCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQISLWQ*AIHHFN
Trigger: GTTGAAATGATGGATGGCTCACTGCCATAGGCTGAT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CAGATATCATCCATGAAGGCTCTGCTAGAAGAATTCCTTTTGCTGAAGAAGTATGAGAAAGTGGACCCCTaGCGTCAAAAGCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QISSMKALLEEFLLLKKYEKVDP*RQKLSV
Trigger: CACGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTC...ATACTTCTTCAGCAAAAGGAATTCTTCTAGCAGAGCCTTCATGGATGATATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATCTAGATACTGGGCTTaGGGGTGGCCCACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSASRYWA*GWPTSN
Trigger: ATTACTGGTGGGCCACCCTCAAGCCCAGTATCTAGA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGTTGGTTGTTGCTGCTaGCTTGAAACCGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAVGCCC*LETDPP
Trigger: TGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAAC...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGAAATGGAAGGCTGCTaGCCTAAAGCTGAAGTTACA +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLREMEGC*PKAEVT
Trigger: TGTAACTTCAGCTTTAGGTCAGCAGCCTTCCATTTC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTCCAGTTGAACTAACCTaGCTTGTAACAGAAATACTA +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFPVELT*LVTEIL
Trigger: TAGTATTTCTGTTACAAGTCAGGTTAGTTCAACTGG...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACAATAGCTACCACACTTaGACCAGAGGAGCTATTATC +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNNSYHT*TRGAII
Trigger: GATAATAGCTCCTCTGGTGCAAGTGTGGTAGCTATT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGCCACTTTATAACACATaGACGCTATCGAACAATTCT +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTPLYNT*TLSNNS
Trigger: AGAATTGTTCGATAGCGTGCATGTGTTATAAAGTGG...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTCCACTTTATAACACATaGACGCTATCGAACAATTCT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFPLYNT*TLSNNS
Trigger: AGAATTGTTCGATAGCGTGCATGTGTTATAAAGTGG...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGAGTGCAATTTCCTTCTaGACCGTAATCTTTGTATTG +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTSAISF*TVIFVL
Trigger: CAATACAAAGATTACGGTGCAGAAGGAAATTGCACT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGCTCTCAGTGTCCTCTaGTATACTGTTGTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRALSVL*YTVVRA
Trigger: AGCTCTAACAACAGTATAGCAGAGGACACTGAGAGC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGACTGTGGTATACTAACTaGTGGAATACTCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRLWYTN*WNTLWT
Trigger: GGTCCACAGAGTATTCCAGCAGTTAGTATACCACAG...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGTTGCTGACCAATATTTaGAATCTGACTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTLLTNI*NLTASR
Trigger: CCTACTGGCAGTCAGATTGCAAATATTGGTCAGCAA...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGCAGGTGGAACCACTTaGGAAGATGGAGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPAGGTT*EDGGAP
Trigger: GGGTGCTCCTCCATCTTCGCAAGTGGTTCCACCTGC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp AACAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATCAGAGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: NRYREPLLKERSLSSFLYQRLLG*CYSHLK
Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCTCTG...ATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAACTGGTCTACACCATTaGGATTTCATGCAATTGCAG +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSTGLHH*DFMQLQ
Trigger: CTGCAATTGCATGAAATCCCAATGGTGTAGACCAGT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CCA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCTTCTCCTGCTCCAGCTaGGAATTTTTCTCTATTAGT +
Preference number: 4 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLFSCSS*EFFSIS
Trigger: ACTAATAGAGAAAAATTCCCAGCTGGAGCAGGAGAA...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTSLRT*DWSNSY
Trigger: GTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCACACAACATTCTGTTGTaGAAGGTGAGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSHNILL*KVRQMR
Trigger: CCTCATTTGCCTCACCTTCCACAACAGAATGTTGTG...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGCTGAGAAATACTCTGTaGTATACTAACTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTLRNTL*YTNCWN
Trigger: ATTCCAGCAGTTAGTATACCACAGAGTATTTCTCAG...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTCTGAGAAATACTCTGTaGTATACTAACTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFLRNTL*YTNCWN
Trigger: ATTCCAGCAGTTAGTATACCACAGAGTATTTCTCAG...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTGGCTTGCAGAGGTACTaGCTGAAGACCTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIGLQRY*LKTLLL
Trigger: CAAAAGCAAGGTCTTCAGCCAGTACCTCTGCAAGCC...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCACTGTGTAGAAACCATTaGTTGCTGTTGTCCATACTG +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSLCRNH*LLLSIL
Trigger: CAGTATGGACAACAGCAACCAATGGTTTCTACACAG...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGCTACTCCTGCAGAACTaGGCTGTCCGGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQLLLQN*AVRRTL
Trigger: CAATGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAG...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGGTTAACAAGGAACTTTaGGATGCAATAACCAATTGT +
Preference number: 4 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSVNKEL*DAITNC
Trigger: ACAATTGGTTATTGCATCCCAAAGTTCCTTGTTAAC...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGATCTGCCAAGCTGCATaGGGTCCCGGTATATCCATG +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQICQAA*GPGISM
Trigger: CATGGATATACCGGGACCTCATGCAGCTTGGCAGAT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGTGTCATCCATTGTTTaGGAAGAAAGAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSVSSIV*EERGTV
Trigger: TACTGTGCCTCTTTCTTCTCAAACAATGGATGACAC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAATCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVESSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCATCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSSSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCCTGTTGTACATACTCTaGAGCAGGATTTTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ELSQELETHPTLGETSQPLLYIL*SRILSH
Trigger: GTGACTCAAAATCCTGCTTCAGAGTATGTACAACAG...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAGTTGTGGAAATGACTaGCATTATGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSSCGND*HYVNRV
Trigger: GACCCTGTTAACATAATGGCAGTCATTTCCACAACT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGATCATTTCAACAGGATaGCCGTGTCACCACTTTATA +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTIISTG*PCHHFI
Trigger: TATAAAGTGGTGACACGGGCATCCTGTTGAAATGAT...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAATCATTTCAACAGGATaGCCGTGTCACCACTTTATA +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSIISTG*PCHHFI
Trigger: TATAAAGTGGTGACACGGGCATCCTGTTGAAATGAT...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTCACAAATATTCAGCTaGCAAAATTTCATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFSQIFS*QNFMSL
Trigger: GAGACTCATGAAATTTTGGCAGCTGAATATTTGTGA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACTCACAAATATTCAGCTaGCAAAATTTCATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSQIFS*QNFMSL
Trigger: GAGACTCATGAAATTTTGGCAGCTGAATATTTGTGA...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGTGTTGTTGTTGCTGCTaGTGCTGCTGCACCACCACA +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQCCCCC*CCCTTT
Trigger: TGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACA...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAGTAGAAACCATTGGTTaGTGTTGTCCATACTGTAAC +
Preference number: 4 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSVETIG*CCPYCN
Trigger: GTTACAGTATGGACAACAGCAACCAATGGTTTCTAC...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGTGCAGTAGGTATGTTTaGTTGCTGACCAATATTTGC +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTCSRYV*LLTNIC
Trigger: GCAAATATTGGTCAGCAAGCAAACATACCTACTGCA...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCACAGCGAGCAATGAAATaGGTGACTGTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAQRAMK*VTVEAD
Trigger: ATCTGCCTCCACAGTCACCCATTTCATTGCTCGCTG...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTACTTAGAACTTGGGATTaGTCCAATTCCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLLRTWD*SNSYWA
Trigger: TGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAG...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: ELSQELETHPTLGETSQPTSLRT*DWSNSY
Trigger: GTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGT...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATCCACCTGTAGTACTTaGAGCACGCATATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRSTCST*STHISH
Trigger: ATGACTAATATGCGTGCTCCAAGTACTACAGGTGGA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATGGTATACTAACTGCTaGAATACTCTGTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRWYTNC*NTLWTS
Trigger: ACTGGTCCACAGAGTATTCCAGCAGTTAGTATACCA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATCTACTCCTTGTGGCTaGGGAGGCACAGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSASTPCG*GGTVNK
Trigger: CTTGTTAACTGTGCCTCCCCAGCCACAAGGAGTAGA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCATTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCCAAAATATCTTTATaGCAACTGCTATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: GETSQPRVTGFLKWKSASPKISL*QLLSAY
Trigger: ATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGG...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACCCCAAAATATCTTTATaGCAACTGCTATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNPKISL*QLLSAY
Trigger: ATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGG...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACCCAAAATATCTTTATaGCAACTGCTATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLPKISL*QLLSAY
Trigger: ATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCCCAAAATATCTTTATaGCAACTGCTATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTPKISL*QLLSAY
Trigger: ATAGGCTGATAGCAGTTGTCATAAAGATATTTTGGG...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTAGGTGCTGGCATGTGTaGCAGATATCATCCATGAAG +
Preference number: 4 (lower is better)
Translates to: YREPLLKERSLSSFLYFSRCWHV*QISSMK
Trigger: CTTCATGGATGATATCTGTCACACATGCCAGCACCT...ACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR TCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTCTGAAGCAGGATTTTaGGTCACTGATTTGACATGG +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQSEAGF*VTDLTW
Trigger: CCATGTCAAATCAGTGACTCAAAATCCTGCTTCAGA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp CAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTTCACCACTGATAGTCTaGGGTAAGCCAACTAAGGAG +
Preference number: 4 (lower is better)
Translates to: QIQRAAFKRKESLKLPLFSPLIV*GKPTKE
Trigger: CTCCTTAGTTGGCTTACCTCAGACTATCAGTGGTGA...AAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACATTAGTTCTTTGATTTaGTCTTTGAGGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNISSLI*SLRTST
Trigger: AGTGGAGGTCCTCAAAGAGCAAATCAAAGAACTAAT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKRYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTATCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACCACTTTATAACACATaGACGCTATCGAACAATTCT +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLPLYNT*TLSNNS
Trigger: AGAATTGTTCGATAGCGTGCATGTGTTATAAAGTGG...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCCACTTTATAACACATaGACGCTATCGAACAATTCT +
Preference number: 4 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTPLYNT*TLSNNS
Trigger: AGAATTGTTCGATAGCGTGCATGTGTTATAAAGTGG...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AACAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTCTAGGATCACTCCTTaGACCTCTGGTAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NRYREPLLKERSLSSFLYSRITP*TSGRRE
Trigger: TTCTCTCCTACCAGAGGTGCAAGGAGTGATCCTAGA...ATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR GCA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACAGTGCAATTTCCTTCTaGACCGTAATCTTTGTATTG +
Preference number: 4 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNSAISF*TVIFVL
Trigger: CAATACAAAGATTACGGTGCAGAAGGAAATTGCACT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAAGTCATCCCTGCAGCTaGATTAGGAACACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSASHPCS*IRNTAN
Trigger: GTTAGCAGTGTTCCTAATGCAGCTGCAGGGATGACT...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTGCAGGTGCTGGCATGTGTGACAGATATCATCCATGAAGGCTCTGCTAGAAGACAAATTTGTATTAGTTaGTATCAAGGGAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: LQVLACVTDIIHEGSARRQICIS*YQGRLT
Trigger: AGTCAACCTCCCTTGATAGCAACTAATACAAATTTG...TCTTCTAGCAGAGCCTTCATGGATGATATCTGTCACACATGCCAGCACCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATTCTCCTGCTCCAGCTaGGAATTTTTCTCTATTAGT +
Preference number: 4 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRFSCSS*EFFSIS
Trigger: ACTAATAGAGAAAAATTCCCAGCTGGAGCAGGAGAA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAGGTGTCTCGGCTTCCTaGAAGTTATTTAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKGVSAS*KLFRVS
Trigger: AGAGACCCTAAATAACTTCCAGGAAGCCGAGACACC...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTCCACCTGTAGTACTTaGAGCACGCATATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQSTCST*STHISH
Trigger: ATGACTAATATGCGTGCTCCAAGTACTACAGGTGGA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATGGAACCAAGTTTGTTaGGGCAGAAGGCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAWNQVC*GRRHSR
Trigger: TCTGGAATGCCTTCTGCCCCAACAAACTTGGTTCCA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR TCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQSSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAACTTTTCTTTTTCATTTaGGTTCCGCCTGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKLFFFI*VPPGAR
Trigger: TCTTGCGCCAGGCGGAACTCAAATGAAAAAGAAAAG...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGACCATTGGGATTTCATaGAATTGCAGCCAAAAACAC +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQTIGIS*NCSQKH
Trigger: GTGTTTTTGGCTGCAATTGCATGAAATCCCAATGGT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR GCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSASRLFS*SSWEFF
Trigger: GAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCT...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGAGATATCTGCCAAGCTaGATGAGGTCCCGGTATATC +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQRYLPS*MRSRYI
Trigger: GATATACCGGGACCTCATGCAGCTTGGCAGATATCT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPITIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAAGTTGTGGAAATGACTaGCATTATGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLSCGND*HYVNRV
Trigger: GACCCTGTTAACATAATGGCAGTCATTTCCACAACT...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTATCACAAATATTCAGCTaGCAAAATTTCATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLSQIFS*QNFMSL
Trigger: GAGACTCATGAAATTTTGGCAGCTGAATATTTGTGA...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGCTAGATAAAATCTTCTaGCTTTCCGCAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQLDKIF*LSAAQG
Trigger: TCCCTGGGCTGCGGAAAGCCAGAAGATTTTATCTAG...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPITSLRT*DWSNSY
Trigger: GTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CAGATATCATCCATGAAGGCTCTGCTAGAAGAATTCCTTTTGCTGAAGAAGTATACTCTCTCCAGAAGCTaGATATTCTGTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QISSMKALLEEFLLLKKYTLSRS*IFCLQG
Trigger: CCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGT...ATACTTCTTCAGCAAAAGGAATTCTTCTAGCAGAGCCTTCATGGATGATATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAATGCTGGAATACTCTGTaGACCAGTGCTACCAAAATC +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKCWNTL*TSATKI
Trigger: GATTTTGGTAGCACTGGTCCACAGAGTATTCCAGCA...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CAGATATCATCCATGAAGGCTCTGCTAGAAGAATTCCTTTTGCTGAAGAAGTATAATGACAAGATCAGGTaGCTGGCTCATCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: QISSMKALLEEFLLLKKYNDKIR*LAHPCV
Trigger: GACACAAGGATGAGCCAGCCACCTGATCTTGTCATT...ATACTTCTTCAGCAAAAGGAATTCTTCTAGCAGAGCCTTCATGGATGATATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
3UTR CAA 72 bp TTTTATAGTCATGCAGAATCAACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTCAAATCATCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FYSHAESTARTS*LIWSHLKSSFA
Trigger: AGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTTCTTCTCTTACCTGCTaGACAACTCAATGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPISSLTC*TTQCVN
Trigger: ATTGACACATTGAGTTGTTCAGCAGGTAAGAGAAGA...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGATTAGTTCTTTGATTTaGTCTTTGAGGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQISSLI*SLRTST
Trigger: AGTGGAGGTCCTCAAAGAGCAAATCAAAGAACTAAT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAACTATACAGGTGATATaGAGAAACCCCTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKTIQVI*RNPYWE
Trigger: TTCCCAGTAGGGGTTTCTGCATATCACCTGTATAGT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTATCATTTCAACAGGATaGCCGTGTCACCACTTTATA +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIIISTG*PCHHFI
Trigger: TATAAAGTGGTGACACGGGCATCCTGTTGAAATGAT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CAGATATCATCCATGAAGGCTCTGCTAGAAGAATTCCTTTTGCTGAAGAAGTATGGTAGCAGGGGTTTGTaGTATATTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QISSMKALLEEFLLLKKYGSRGL*YILWWN
Trigger: GTTCCACCACAAAATATAGCACAAACCCCTGCTACC...ATACTTCTTCAGCAAAAGGAATTCTTCTAGCAGAGCCTTCATGGATGATATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTTGCAGAAACCCCTACTaGGAAATCCATTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPICRNPY*EIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCA...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGACATCCTTGCTCATCTaGTCCCACCTCAAATCATCT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQTSLLI*SHLKSS
Trigger: AGATGATTTGAGGTGGGACCAGATGAGCAAGGATGT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAACAAGCCTTAGAACTTaGGATTGGTCCAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSATSLRT*DWSNSY
Trigger: GTAGGAATTGGACCAATCCCAAGTTCTAAGGCTTGT...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AACAGATACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTCTAGACATATTGCATaGATCCATTCACCACTGCCT +
Preference number: 4 (lower is better)
Translates to: NRYREPLLKERSLSSFLYSRHIA*IHSPLP
Trigger: AGGCAGTGGTGAATGGATCCATGCAATATGTCTAGA...ATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTATCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGATGCAGGTGAACCACTaGATGATACAGCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQMQVNH*MIQQKL
Trigger: CAACTTCTGCTGTATCATCCAGTGGTTCACCTGCAT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGTGCTGGAATACTCTGTaGACCAGTGCTACCAAAATC +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQCWNTL*TSATKI
Trigger: GATTTTGGTAGCACTGGTCCACAGAGTATTCCAGCA...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR TCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGGTCAAATTTGTACAGTaGACTCTGTTCCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQVKFVQ*TLFPLI
Trigger: AATGAGGGGGAACAGAGTTCACTGTACAAATTTGAC...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR TCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATTCAACCAGCTCAATTaGAAGACTTCAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAFNQLN*KTSVNK
Trigger: CTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTCCACTTTATAACACATaGACGCTATCGAACAATTCT +
Preference number: 4 (lower is better)
Translates to: SLFCKDLRQALELGIGPIPLYNT*TLSNNS
Trigger: AGAATTGTTCGATAGCGTGCATGTGTTATAAAGTGG...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTAATCACTGTTGTTCCTaGTCCTACTCCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPNHCCS*SYSCRT
Trigger: AGTTCTGCAGGAGTAGGAGCAGGAACAACAGTGATT...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAACAAGGAACTTTGGGATaGAATAACCAATTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKQGTLG*NNQLLR
Trigger: CCTCAACAATTGGTTATTGCATCCCAAAGTTCCTTG...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTCTTAGAACTTGGGATTaGTCCAATTCCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPLRTWD*SNSYWA
Trigger: TGCCCAGTAGGAATTGGACCAATCCCAAGTTCTAAG...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTAATTCCTTGAGCTACTaGTTCTACTCCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPNSLSY*FYSLWL
Trigger: CAGCCACAAGGAGTAGAACCAGTAGCTCAAGGAATT...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTTCATGCAGAATCAACTaGAAGGACATCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPSCRIN*KDILAH
Trigger: ATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGA...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAATTTCATAGAACTCAGTaGAAGTCCATCTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKFHRTQ*KSIYLF
Trigger: AAAAAGGTAGATGGACTTGCACTGAGTTCTATGAAA...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR GCA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATTTCATAGAACTCAGTaGAAGTCCATCTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSAFHRTQ*KSIYLF
Trigger: AAAAAGGTAGATGGACTTGCACTGAGTTCTATGAAA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTTGCAGAAACCCCTACTaGGAAATCCATTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPCRNPY*EIHFIS
Trigger: ACTAATGAAATGGATTTCCCAGTAGGGGTTTCTGCA...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTACAGGGTTCTTAAAGTaGAAATCAGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPTGFLK*KSASPT
Trigger: AGTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGT...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTTGCTGTTTGAAGAATTaGCTGCTGTTGTACATACTC +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPCCLKN*LLLYIL
Trigger: GAGTATGTACAACAGCAGCCAATTCTTCAAACAGCA...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
3UTR CAA 72 bp GAACTGAGCATTTTTCAAAGTATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAAGGATTTACTTCAGCG +
Preference number: 4 (lower is better)
Translates to: ELSIFQSIQPAQ*KDFSEQGFTSA
Trigger: CGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAATACTTTGAAAAATGCTCAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR CAA 72 bp CTTAAAGTGGAAATCAGCTTCTCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATTCCAATTATACACAGA +
Preference number: 4 (lower is better)
Translates to: LKVEISFSNFRL*ILDLLIPIIHR
Trigger: TCTGTGTATAATTGGAATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGAGAAGCTGATTTCCACTTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR GCA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGCAAATTTGTATTAGTTaGTATCAAGGGAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQQICIS*YQGRLT
Trigger: AGTCAACCTCCCTTGATAGCAACTAATACAAATTTG...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR GCA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTTCACAAATATTCAGCTaGCAAAATTTCATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPSQIFS*QNFMSL
Trigger: GAGACTCATGAAATTTTGGCAGCTGAATATTTGTGA...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
3UTR CAA 72 bp CACCATTTTGTCACTCTCATAGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCACAGTACTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: HHFVTLIVLCHP*FEKKEAQYYCF
Trigger: AAAACAATAGTACTGTGCCTCTTTCTTCTCAAACAATGGATGACACAAAACTATGAGAGTGACAAAATGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS GCA 90 bp CCTCCCGCCGCGTCGGCGGCCGCTGCAAAGCCCTCCCGGCCGCTCTaGACGGAGGCAGCGCCAAGCAAATGTCGCCTTCCCCTCGCCACC +
Preference number: 5 (lower is better)
Translates to: PPAASAAAAKPSRPL*TEAAPSKCRLPLAT
Trigger: GGTGGCGAGGGGAAGGCGACATTTGCTTGGCGCTGCCTCCGTGCAGAGCGGCCGGGAGGGCTTTGCAGCGGCCGCCGACGCGGCGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501704.3
CDS GCA 90 bp GAGGCGCTGCCACTACCGCTGCCCCTTCGAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCGCTAATGTCTGCAGCGGCGGCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: EALPLPLPLRGNIAG*AIFLALMSAAAAAA
Trigger: CGCGGCCGCCGCCGCTGCAGACATTAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 90 bp GAGAGCAGAGGCGCTGCCACTACCGCTGCCCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCTAGCGCTAATGTCTGCAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: ESRGAATTAAPSREH*RVRHLPSANVCSGG
Trigger: GCCGCCGCTGCAGACATTAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCGCCTCTGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CCA 90 bp AATACCCGCAGGGCCCCTTTCTCCCTCCACGGCTGCCGTGGTAGGTaGCTCCACGCTGGCCGAATGGAGACAGCGCCGGCATTTCTACGC +
Preference number: 5 (lower is better)
Translates to: NTRRAPFSLHGCRGR*LHAGRMETAPAFLR
Trigger: GCGTAGAAATGCCGGCGCTGTCTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGTGGAGGGAGAAAGGGGCCCTGCGGGTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS CCA 90 bp CTGAGCCTGCGAAAGGAGGTTCAGGCTTTGTGGAGGCGGAGGCTGTaGTCCCGACGTAGAAGATGCTGCAGGGGGCGGCGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LSLRKEVQALWRRRL*SRRRRCCRGRRLKQ
Trigger: CTGCTTCAGCCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTCCTTTCGCAGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 90 bp AGAAGACCATTTAATACCCGCAGGGCCCCTTTCTCCCTCCACGGCTaGCGTGGTAGGTGGCTCCACGCTGGCCGAATGGAGACAGCGCCG +
Preference number: 5 (lower is better)
Translates to: RRPFNTRRAPFSLHG*RGRWLHAGRMETAP
Trigger: CGGCGCTGTCTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGTGGAGGGAGAAAGGGGCCCTGCGGGTATTAAATGGTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS CCA 90 bp AGGCTGTGCCTGCAGCTGAGCCTGCGAAAGGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGTGGTCCCGACGTAGAAGATGCTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RLCLQLSLRKEVQAL*RRRLWSRRRRCCRG
Trigger: CCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTCCTTTCGCAGGCTCAGCTGCAGGCACAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS-3UTR CAA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCCAGGCGGCTGGTGCATaGTGTTGGGTACCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCQAAGA*CWVPGA
Trigger: CGCCCCCGGTACCCAACACAATGCACCAGCCGCCTG...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp GGAGGCTGTGGTCCCGACGTAGAAGATGCTGCAGGGGGCGGCGGCTaGAGCAGCGACGGAGGCGGAAAATCCTCGGAAGATGTGGCATTA +
Preference number: 5 (lower is better)
Translates to: GGCGPDVEDAAGGGG*SSDGGGKSSEDVAL
Trigger: TAATGCCACATCTTCCGAGGATTTTCCGCCTCCGTCGCTGCTTCAGCCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS TCA 90 bp CCTCGGAAGATGTGGCATTACTACCGACGCCGGTACCTGCTGCATTaGGAGCAGAGGCGCTGCCACTACCGCTGCCCCTTCGAGGGAACA +
Preference number: 5 (lower is better)
Translates to: PRKMWHYYRRRYLLH*EQRRCHYRCPFEGT
Trigger: TGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CCA 90 bp TCTCCCTCCACGGCTGCCGTGGTAGGTGGCTCCACGCTGGCCGAATaGAGACAGCGCCGGCATTTCTACGCGCATCAAGAGCAATCATCA +
Preference number: 5 (lower is better)
Translates to: SPSTAAVVGGSTLAE*RQRRHFYAHQEQSS
Trigger: TGATGATTGCTCTTGATGCGCGTAGAAATGCCGGCGCTGTCTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGTGGAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCAGGCGGCTGGTGCATaGTGTTGGGTACCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSQAAGA*CWVPGA
Trigger: CGCCCCCGGTACCCAACACAATGCACCAGCCGCCTG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCCCCTTCGAGGGAACATaGCCGGGTGCGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCPFEGT*PGAPSS
Trigger: GGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGG...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp CACCGTAATCTTTGTATTGGAGACGCCGGAGAGGAAAACGGGACCTaGCGCTCCGCCTGGCGCGATTCCTCCTTCTCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: HRNLCIGDAGEENGT*RSAWRDSSFSSSSA
Trigger: GGCTGAGGAGGAGGAGAAGGAGGAATCGCGCCAGGCGGAGCGTCAGGTCCCGTTTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 90 bp GATTCCTCCTTCTCCTCCTCCTCAGCCAAAGGCGCCGGTCGCTCCTaGCTTCGAGAGCGAGCTTCGGAAAGGAGGATGAACGAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: DSSFSSSSAKGAGRS*LRERASERRMNEGE
Trigger: TTCACCCTCGTTCATCCTCCTTTCCGAAGCTCGCTCTCGAAGGCAGGAGCGACCGGCGCCTTTGGCTGAGGAGGAGGAGAAGGAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 90 bp CGGAAAATCCTCGGAAGATGTGGCATTACTACCGACGCCGGTACCTaGTGCATTGAGAGCAGAGGCGCTGCCACTACCGCTGCCCCTTCG +
Preference number: 5 (lower is better)
Translates to: RKILGRCGITTDAGT*CIESRGAATTAAPS
Trigger: CGAAGGGGCAGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCCGAGGATTTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CCA 90 bp AGGTGGGGCTGGTTGGGAGAGACTGCCCCAGGTGTCTCGGCTTCCTaGAAGTTATTTAGGGTCTCTTCTGAGGAGCTGCGTTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RWGWLGETAPGVSAS*KLFRVSSEELRSGS
Trigger: GGAGCCCGAACGCAGCTCCTCAGAAGAGACCCTAAATAACTTCCAGGAAGCCGAGACACCTGGGGCAGTCTCTCCCAACCAGCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 90 bp AAAATCCTCGGAAGATGTGGCATTACTACCGACGCCGGTACCTGCTaGATTGAGAGCAGAGGCGCTGCCACTACCGCTGCCCCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: KILGRCGITTDAGTC*IESRGAATTAAPSR
Trigger: CCTCGAAGGGGCAGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCCGAGGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS-3UTR CAA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCAGCAGGTGGAACCACTaGCGAAGATGGAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCSRWNH*RRWRST
Trigger: GGTGCTCCTCCATCTTCGCAAGTGGTTCCACCTGCT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 90 bp CGGCTGGTGCATTGTGTTGGGTACCGGGGGCGCGGAGGAGACGAGTaGAATTTCCTTCTGCACCGTAATCTTTGTATTGGAGACGCCGGA +
Preference number: 5 (lower is better)
Translates to: RLVHCVGYRGRGGDE*NFLLHRNLCIGDAG
Trigger: TCCGGCGTCTCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCGCCCCCGGTACCCAACACAATGCACCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 90 bp CTGACCAATATTTGCAATCTGACTGCCAGTAGGTACAGCAGACACTaGTGCCGGAGCCTGGCCAACAGGCTGGACAGATGCCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LTNICNLTASRYSRH*CRSLANRLDRCPCR
Trigger: CCTGCAGGGGCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAGTCAGATTGCAAATATTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS GCA 90 bp GTGTTGGGTACCGGGGGCGCGGAGGAGACGAGTGCAATTTCCTTCTaGACCGTAATCTTTGTATTGGAGACGCCGGAGAGGAAAACGGGA +
Preference number: 5 (lower is better)
Translates to: VLGTGGAEETSAISF*TVIFVLETPERKTG
Trigger: TCCCGTTTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCGCCCCCGGTACCCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 90 bp CAGCTGGATACCCTGTGGCTGAGCCACAGGAATCACTGTTGTTCCTaGTCCTACTCCTGCAGAACTGGGCTGTCCGGAGGACATTGCTGT +
Preference number: 5 (lower is better)
Translates to: QLDTLWLSHRNHCCS*SYSCRTGLSGGHCC
Trigger: ACAGCAATGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGAGCAGGAACAACAGTGATTCCTGTGGCTCAGCCACAGGGTATCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 90 bp ACCAATATTTGCAATCTGACTGCCAGTAGGTACAGCAGACACTGCTaGCGGAGCCTGGCCAACAGGCTGGACAGATGCCCCTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TNICNLTASRYSRHC*RSLANRLDRCPCRL
Trigger: CAACCTGCAGGGGCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAGTCAGATTGCAAATATTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACGGCTGGTGCATTGTGTaGGGTACCGGGGGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNGWCIV*GTGGAE
Trigger: CTCCGCGCCCCCGGTACCCAACACAATGCACCAGCC...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCACTCCTCAGGTGCGTTGTTGCTGCTGACTaGAAACCGATCCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: AHVTPTAEWDPSGSLLRCVVAAD*KPIPQS
Trigger: TGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAAC...GCACCTGAGGAGTGAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp CCATCTGAAACTGCTGACATTCCCCCACTGTCACCACTGATAGTCTaGGGTAAGCCAACTAAGGAGGGCTCCGCTGCACGCCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PSETADIPPLSPLIV*GKPTKEGSAARLAS
Trigger: AGATGCCAGGCGTGCAGCGGAGCCCTCCTTAGTTGGCTTACCTCAGACTATCAGTGGTGACAGTGGGGGAATGTCAGCAGTTTCAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000460842.5
ENST00000486464.1
CDS GCA 90 bp GCTCTCCGTGGTCTTGGCTGTATCTGTGGTTCTAGGATCACTCCTTaGACCTCTGGTAGGAGAGAAGCACTCTCATCCTCGCCATCCACC +
Preference number: 5 (lower is better)
Translates to: ALRGLGCICGSRITP*TSGRREALSSSPST
Trigger: GGTGGATGGCGAGGATGAGAGTGCTTCTCTCCTACCAGAGGTGCAAGGAGTGATCCTAGAACCACAGATACAGCCAAGACCACGGAGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460842.5
CDS-3UTR CAA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCACCCTGGAAGGGGAGTTaGCACTGGAGGAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSPWKGS*HWRSRL
Trigger: CAGGCGGCTCCTCCAGTGCAAACTCCCCTTCCAGGG...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 90 bp AGGTGGAACCACTTGCGAAGATGGAGGAGCACCCTGCTGAATAACTaGAGGTGGAACCTGGGTAGAGGGCTGCTGCACTGCAGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: RWNHLRRWRSTLLNN*RWNLGRGLLHCSRY
Trigger: ATACCTACTGCAGTGCAGCAGCCCTCTACCCAGGTTCCACCTTCAGTTATTCAGCAGGGTGCTCCTCCATCTTCGCAAGTGGTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCCACAGGAATCACTGTaGTTCCTGCTCCTACTCCTG +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSPQESL*FLLLLL
Trigger: CAGGAGTAGGAGCAGGAACAACAGTGATTCCTGTGG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 90 bp GGGCTGCTGCACTGCAGTAGGTATGTTTGCTTGCTGACCAATATTTaGAATCTGACTGCCAGTAGGTACAGCAGACACTGCTGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: GLLHCSRYVCLLTNI*NLTASRYSRHCCRS
Trigger: GCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAGTCAGATTGCAAATATTGGTCAGCAAGCAAACATACCTACTGCAGTGCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 90 bp TCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTaGAGAAAGTGGACCCCTGACGTCAAAAGCTCTCCGTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SHSLQKLDILSPRVQ*RKWTPDVKSSPWSW
Trigger: CCAAGACCACGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437455.2
ENST00000460842.5
ENST00000486464.1
CDS CCA 90 bp ATCTGTGTAGAAACCATTGGTTGCTGTTGTCCATACTGTAACTGTTaGGGTGGTGGTGCCCCTGGAAGGGGAGTTTGCACTGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ICVETIGCCCPYCNC*GGGAPGRGVCTGGA
Trigger: GGCTCCTCCAGTGCAAACTCCCCTTCCAGGGGCACCACCACCCCAACAGTTACAGTATGGACAACAGCAACCAATGGTTTCTACACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCACCCTTCGAGGGAACATaGCCGGGTGCGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSPFEGT*PGAPSS
Trigger: GGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGG...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTTTGGAGGGTCACACCTaGGAGAGCTGGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: AYGSEPSIISTGCPCHHFLEGHT*ESWLLL
Trigger: CAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAA...AAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGCTGTCCGGAGGACATaGCTGTTTGAAGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLAVRRT*LFEELA
Trigger: AGCCAATTCTTCAAACAGCAATGTCCTCCGGACAGC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 90 bp CCAAAATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTTaGTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCACCACCACA +
Preference number: 5 (lower is better)
Translates to: PKSICWRVTPWRAGC*CCCCCCCCCCCTTT
Trigger: TGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CCA 90 bp CTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTaGACCCCTGACGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTG +
Preference number: 5 (lower is better)
Translates to: LQKLDILSPRVQWRK*TPDVKSSPWSWLYL
Trigger: CAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437455.2
ENST00000460842.5
ENST00000486464.1
CDS CCA 90 bp CTGGAGGAGCCGCCTGAGAATATGGTAGCTGGGGTTGAGCCAAACTaGAAATGGAAGGCTGCTGACCTAAAGCTGAAGTTACACCAACCA +
Preference number: 5 (lower is better)
Translates to: LEEPPENMVAGVEPN*KWKAADLKLKLHQP
Trigger: TGGTTGGTGTAACTTCAGCTTTAGGTCAGCAGCCTTCCATTTCCAGTTTGGCTCAACCCCAGCTACCATATTCTCAGGCGGCTCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAACCGTAATCTTTGTATaGGAGACGCCGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLTVIFV*ETPERK
Trigger: TTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGT...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGTTGTTGCTGCTGACTaGAAACCGATCCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTVVAAD*KPIPQS
Trigger: TGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAAC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCTACTGGCTGAAGACCTaGCTTTTGCTGATAGCTCAG +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSYWLKT*LLLIAQ
Trigger: CTGAGCTATCAGCAAAAGCAAGGTCTTCAGCCAGTA...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGGAGGACATTGCTGTTaGAAGAATTGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLGGHCC*KNWLLL
Trigger: CAACAGCAGCCAATTCTTCAAACAGCAATGTCCTCC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGGATGCAATAACCAATaGTTGAGGAAGGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLGCNNQ*LRKAWS
Trigger: GCTCCAAGCCTTCCTCAACAATTGGTTATTGCATCC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAGTGGTGGAACCAAGTTaGTTGGGGCAGAAGGCATTC +
Preference number: 5 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSVVEPS*LGQKAF
Trigger: GAATGCCTTCTGCCCCAACAAACTTGGTTCCACCAC...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 90 bp GCTGGATATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGACCCCTaGCGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTGTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: AGYSVSKGSVEKVDP*RQKLSVVLAVSVVL
Trigger: TAGAACCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437455.2
ENST00000460842.5
ENST00000486464.1
CDS TCA 90 bp ACTGTCAGAGCTTCCAGTTGTAGAGAGTTTTCTAGATACTGGGCTTaGGGGTGGCCCACCAGTAATGGATGCACTGGCCACAGCAACATG +
Preference number: 5 (lower is better)
Translates to: TVRASSCREFSRYWA*GWPTSNGCTGHSNM
Trigger: CATGTTGCTGTGGCCAGTGCATCCATTACTGGTGGGCCACCCTCAAGCCCAGTATCTAGAAAACTCTCTACAACTGGAAGCTCTGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp GGCTCCGCTGCACGCCTGGCATCTTCAATTTGGCTTCCAATTGCCTaGGCTAATGATTGTGCGGAGAACTGGGTAGAACTTAGTGGTATC +
Preference number: 5 (lower is better)
Translates to: GSAARLASSIWLPIA*ANDCAENWVELSGI
Trigger: GATACCACTAAGTTCTACCCAGTTCTCCGCACAATCATTAGCTCAGGCAATTGGAAGCCAAATTGAAGATGCCAGGCGTGCAGCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000486464.1
CDS GCA 90 bp AGGTGGAACCTGGGTAGAGGGCTGCTGCACTGCAGTAGGTATGTTTaGTTGCTGACCAATATTTGCAATCTGACTGCCAGTAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: RWNLGRGLLHCSRYV*LLTNICNLTASRYS
Trigger: GCTGTACCTACTGGCAGTCAGATTGCAAATATTGGTCAGCAAGCAAACATACCTACTGCAGTGCAGCAGCCCTCTACCCAGGTTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 90 bp AGTGCTACCAAAATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTaGTTGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SATKIHLLEGHTLES*LLLLLLLLLLLLLH
Trigger: GTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CCA 90 bp TGTGGACCAGTGCTACCAAAATCCATCTGTTGGAGGGTCACACCTTaGAGAGCTGGTTGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CGPVLPKSICWRVTP*RAGCCCCCCCCCCC
Trigger: GCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGTGGGATTTCATGCAATaGCAGCCAAAAACACCCTCG +
Preference number: 5 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSWDFMQ*QPKTPS
Trigger: CGAGGGTGTTTTTGGCTGCAATTGCATGAAATCCCA...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCACTGGTCTACACCATaGGGATTTCATGCAATTGCA +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSHWSTP*GFHAIA
Trigger: TGCAATTGCATGAAATCCCAATGGTGTAGACCAGTG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCACTTCTATCGGATTTaGCTTTACAGTCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSHFYRI*LYSLHH
Trigger: GTGGTGGAGACTGTAAAGCAAAATCCGATAGAAGTG...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACTTGGAGGGTCACACCTaGGAGAGCTGGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNLEGHT*ESWLLL
Trigger: CAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAA...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGACCAAAATCCATCTGTaGGAGGGTCACACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTTKIHL*EGHTLE
Trigger: CTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGT...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCATACTGGTTCTACTCCTaGTGGCTGGGGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSYWFYS*WLGRHS
Trigger: ACTGTGCCTCCCCAGCCACAAGGAGTAGAACCAGTA...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 90 bp GAGGGCAAAGAACTAACTGCAGGCAACTGCTGTGAAACAATTCCTTaGGCTACTGGTTCTACTCCTTGTGGCTGGGGAGGCACAGTTAAC +
Preference number: 5 (lower is better)
Translates to: EGKELTAGNCCETIP*ATGSTPCGWGGTVN
Trigger: GTTAACTGTGCCTCCCCAGCCACAAGGAGTAGAACCAGTAGCTCAAGGAATTGTTTCACAGCAGTTGCCTGCAGTTAGTTCTTTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 90 bp TGGCTGGATACCAGTTGCAGCACTCATAGTGGCTTGCAGAGGTACTaGCTGAAGACCTTGCTTTTGCTGATAGCTCAGTTCTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: WLDTSCSTHSGLQRY*LKTLLLLIAQFLRL
Trigger: CAGTCTCAAGAACTGAGCTATCAGCAAAAGCAAGGTCTTCAGCCAGTACCTCTGCAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCTCTTTGATTTGCTCTTaGAGGACCTCCACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLSLICS*RTSTSS
Trigger: AGAAGAAGTGGAGGTCCTCAAAGAGCAAATCAAAGA...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAACCCACCCCATTCACTaGCTCGCTCACGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSTHPIH*LAHVTP
Trigger: AGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGT...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCTTCTTTTTAGGGATCTaGGATGTCCCATTCACCTCT +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLFFLGI*DVPFTS
Trigger: AGAGGTGAATGGGACATCCAAGATCCCTAAAAAGAA...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTGGCTGGTGCATTGTGTaGGGTACCGGGGGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPGWCIV*GTGGAE
Trigger: CTCCGCGCCCCCGGTACCCAACACAATGCACCAGCC...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp CATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCCTCAGGCTCGAAGAAATAGTACCATaGCCCATGCCACTCAAGATA +
Preference number: 5 (lower is better)
Translates to: HSLARSRYSYCRVGSLRLEEIVP*PMPLKI
Trigger: TATCTTGAGTGGCATGGGCAATGGTACTATTTCTTC...GAGCCTGAGGGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCACTTCTATCGGATTTaGCTTTACAGTCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSHFYRI*LYSLHH
Trigger: GTGGTGGAGACTGTAAAGCAAAATCCGATAGAAGTG...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAACTGTTGTTGTTGTTGTaGCTGCTGCTGCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVELLLLL*LLLLLH
Trigger: GTGCAGCAGCAGCAGCAGCAACAACAACAACAACAG...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp TTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTAAGCACTCATAGTGGCTaGCAGAGGTACTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LIDYRAGKPTPFTCSLTLSTHSG*QRYWLK
Trigger: CTTCAGCCAGTACCTCTGCAAGCCACTATGAGTGCT...TAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAAGATGCCCCTGCAGGTaGTGCTGGGACTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSARCPCR*CWDCCG
Trigger: CCCACAGCAGTCCCAGCACAACCTGCAGGGGCATCT...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTGTGGAACCAAGTTTGTaGGGGCAGAAGGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASVEPSL*GQKAFQ
Trigger: CTGGAATGCCTTCTGCCCCAACAAACTTGGTTCCAC...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 90 bp AACTCTGAACCTCGAAGTGTTAACTGTTGGTTGTTGCTGCTGACTTaGAACCGATCCCCCAGTCATCCCTGCAGCTGCATTAGGAACACT +
Preference number: 5 (lower is better)
Translates to: NSEPRSVNCWLLLLT*NRSPSHPCSCIRNT
Trigger: AGTGTTCCTAATGCAGCTGCAGGGATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAACAGTTAACACTTCGAGGTTCAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp TTCACAACTCTGAACCTCGAAGTGTTAACTGTTGGTTGTTGCTGCTaGCTTGAAACCGATCCCCCAGTCATCCCTGCAGCTGCATTAGGA +
Preference number: 5 (lower is better)
Translates to: FTTLNLEVLTVGCCC*LETDPPVIPAAALG
Trigger: TCCTAATGCAGCTGCAGGGATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAACAGTTAACACTTCGAGGTTCAGAGTTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 90 bp CACACTCTCTGTATAGTGACTCAGTGTGCTGACACTACTGCTCACTaGACTCCCACTAGTGCTCTCCCTTTCAGAAGTCACTTCTATCGG +
Preference number: 5 (lower is better)
Translates to: HTLCIVTQCADTTAH*TPTSALPFRSHFYR
Trigger: CCGATAGAAGTGACTTCTGAAAGGGAGAGCACTAGTGGGAGTTCAGTGAGCAGTAGTGTCAGCACACTGAGTCACTATACAGAGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 90 bp AAACTCCTAGATCCATCGCCACTGGTCTACACCATTGGGATTTCATaGAATTGCAGCCAAAAACACCGTTTAAGGGAGTCAGACCCCGGT +
Preference number: 5 (lower is better)
Translates to: KLLDPSPLVYTIGIS*NCSQKHRLRESDPG
Trigger: ACCGGGGTCTGACTCCCTTAAACGGTGTTTTTGGCTGCAATTGCATGAAATCCCAATGGTGTAGACCAGTGGCGATGGATCTAGGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472477.1
CDS CCA 90 bp ACTGCTGGAATACTCTGTGGACCAGTGCTACCAAAATCCATCTGTTaGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: TAGILCGPVLPKSIC*RVTPWRAGCCCCCC
Trigger: ACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACAGAGTATTCCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CCA 90 bp GAGCCGCCTGAGAATATGGTAGCTGGGGTTGAGCCAAACTGGAAATaGAAGGCTGCTGACCTAAAGCTGAAGTTACACCAACCACATTTA +
Preference number: 5 (lower is better)
Translates to: EPPENMVAGVEPNWK*KAADLKLKLHQPHL
Trigger: TAAATGTGGTTGGTGTAACTTCAGCTTTAGGTCAGCAGCCTTCCATTTCCAGTTTGGCTCAACCCCAGCTACCATATTCTCAGGCGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp AACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTACTGCAGAGTGGGATCCAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: NPPHSLARSRYSYCRVGSNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...GGATCCCACTCTGCAGTAGGAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGCTGGCTCATCCTTGTGTCTTCTAGACATATTGCATGGATCCATTCACCACTGAAGCTCTCCGTGGTCTaGGCTGTATCTGTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: GWLILVSSRHIAWIHSPLKLSVV*AVSVVL
Trigger: TAGAACCACAGATACAGCCAAGACCACGGAGAGCTT...CAGTGGTGAATGGATCCATGCAATATGTCTAGAAGACACAAGGATGAGCCAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTCCTCTGCTATACTGTaGTTAGAGCTGATACTAGCG +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTSSAIL*LELILA
Trigger: CGCTAGTATCAGCTCTAACAACAGTATAGCAGAGGA...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp GCCATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCCTGGCATCTTCAATTaGGCTTCCAATTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AIHHFNRMPVSPLYNTCTPGIFN*ASNCLS
Trigger: GCTCAGGCAATTGGAAGCCAAATTGAAGATGCCAGG...CGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 90 bp AATACTACTAGCAGAGGGCAAAGAACTAACTGCAGGCAACTGCTGTaGAACAATTCCTTGAGCTACTGGTTCTACTCCTTGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: NTTSRGQRTNCRQLL*NNSLSYWFYSLWLG
Trigger: CCCCAGCCACAAGGAGTAGAACCAGTAGCTCAAGGAATTGTTTCACAGCAGTTGCCTGCAGTTAGTTCTTTGCCCTCTGCTAGTAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 90 bp AAAGAGGGAACACCAGCAGCCTTGTATAAGCTAGATAAAATCTTCTaGCTTTCCGCAGCCCAGGGAGAAACAGAAAACGGCAGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: KEGTPAALYKLDKIF*LSAAQGETENGSPN
Trigger: ATTAGGGCTGCCGTTTTCTGTTTCTCCCTGGGCTGCGGAAAGCCAGAAGATTTTATCTAGCTTATACAAGGCTGCTGGTGTTCCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CAA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGGGAACACCAGCAGCCTaGTATAAGCTAGATAAAATC +
Preference number: 5 (lower is better)
Translates to: FTTPCRTLSASRRENPWKGTPAA*YKLDKI
Trigger: GATTTTATCTAGCTTATACAAGGCTGCTGGTGTTCC...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTCTTTGATTTGCTCTTaGAGGACCTCCACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTSLICS*RTSTSS
Trigger: AGAAGAAGTGGAGGTCCTCAAAGAGCAAATCAAAGA...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTCACTCCTCAGGTGCCAGGGGCCAATCTGCCTCAGGATTCCTTCGTGGTTTTAATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: LTPQVPGANLPQDSFVVLIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...TAAAACCACGAAGGAATCCTGAGGCAGATTGGCCCCTGGCACCTGAGGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGCCCTAGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: GPRLIDYRAGKPTPFTCSNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...CGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCTAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp TTCACAACCCCATGTAGGACACTAAGCGCAAGCAGGAGAGAGAACCCTTGGAAGGAAGAAATAGTACCATaGCCCATGCCACTCAAGATA +
Preference number: 5 (lower is better)
Translates to: FTTPCRTLSASRRENPWKEEIVP*PMPLKI
Trigger: TATCTTGAGTGGCATGGGCAATGGTACTATTTCTTC...CTTCCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTACCTTGGAGAGCTGGTaGTTGCTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASTLESW*LLLLLL
Trigger: CAACAACAACAACAGCAACAACCAGCTCTCCAAGGT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAACCAAAATCCATCTGTaGGAGGGTCACACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSTKIHL*EGHTLE
Trigger: CTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGT...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCCTGAAGACCTTGCTTTaGCTGATAGCTCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLLKTLL*LIAQFL
Trigger: CAAGAACTGAGCTATCAGCAAAAGCAAGGTCTTCAG...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGCAATTTGGCTTCCAATaGCCTGAGCTAATGATTGTG +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTQFGFQ*PELMIV
Trigger: CACAATCATTAGCTCAGGCAATTGGAAGCCAAATTG...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 90 bp GCAAGCTGCTCAGGACTGGCCAGTGTCTTCAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTCTCTATTAGTTCTTTGATTTGCTCT +
Preference number: 5 (lower is better)
Translates to: ASCSGLASVFSRLFS*SSWEFFSISSLICS
Trigger: AGAGCAAATCAAAGAACTAATAGAGAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCTGAAGACACTGGCCAGTCCTGAGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000487881.2
ENST00000496314.1
ENST00000496838.1
ENST00000611198.4
ENST00000622051.1
CDS GCA 90 bp TTCCGTGTGAGATTCATCCAGATCATCATAGCTCTCAGTGTCCTCTaGTATACTGTTGTTAGAGCTGATACTAGCGGAGATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FRVRFIQIIIALSVL*YTVVRADTSGDLSR
Trigger: CCTGCTCAGATCTCCGCTAGTATCAGCTCTAACAACAGTATAGCAGAGGACACTGAGAGCTATGATGATCTGGATGAATCTCACACGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCTGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLCVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCAGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp AGGTTGATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RLIDYRAGKPTPFTCSLTVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...CGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGTGACTGTGGAGGCAGATTCTCCCTAGCACATCTTCTCCGTCTGTTCAGTTCATCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATT +
Preference number: 5 (lower is better)
Translates to: GDCGGRFSLAHLLRLFSSSNFRL*ILDLLI
Trigger: AATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGA...TGAACTGAACAGACGGAGAAGATGTGCTAGGGAGAATCTGCCTCCACAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAACTGCAAGGACATCCTaGCTCATCTGGTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKTARTS*LIWSHL
Trigger: GAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp ATAGATTACAGAGCCGGTAAACCCACCCCATTCACTTGCTCGCTCACGTTACTCTTCTTTTTAGGGATCTaGGATGTCCCATTCACCTCT +
Preference number: 5 (lower is better)
Translates to: IDYRAGKPTPFTCSLTLLFFLGI*DVPFTS
Trigger: AGAGGTGAATGGGACATCCAAGATCCCTAAAAAGAA...GAGTAACGTGAGCGAGCAAGTGAATGGGGTGGGTTTACCGGCTCTGTAATCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp TTATCCTTTCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTTTGGGTAGCAGGGGTTaGTGCTATATTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSFPTLSRSWIFCLQGFSLGSRG*CYILWW
Trigger: CCACCACAAAATATAGCACAAACCCCTGCTACCCAA...ACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS TCA 90 bp TGGAACCAAGTTTGTTGGGGCAGAAGGCATTCCAGAAGGACCAGTTaGACTAACCTGACTTGTAACAGAAATACTACTAGCAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: WNQVCWGRRHSRRTS*TNLTCNRNTTSRGQ
Trigger: TTGCCCTCTGCTAGTAGTATTTCTGTTACAAGTCAGGTTAGTTCAACTGGTCCTTCTGGAATGCCTTCTGCCCCAACAAACTTGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCATGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSCVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGGATGCCCGTGTCACATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: LSAYGSEPSIISTGCPCHIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...GTGACACGGGCATCCTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTTTCTTTTTAGGGATCTaGGATGTCCCATTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASFFLGI*DVPFTS
Trigger: AGAGGTGAATGGGACATCCAAGATCCCTAAAAAGAA...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAACTGTTGTTGTTGTTGTaGCTGCTGCTGCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKLLLLL*LLLLLH
Trigger: GTGCAGCAGCAGCAGCAGCAACAACAACAACAACAG...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTAACCTTGGAGAGCTGGTaGTTGCTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLTLESW*LLLLLL
Trigger: CAACAACAACAACAGCAACAACCAGCTCTCCAAGGT...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp TTATCCTTTCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTAACCAAATTACCATTTaGGGTAGCAGGGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LSFPTLSRSWIFCLQGFSNQITI*GSRGLC
Trigger: GCACAAACCCCTGCTACCCAAAATGGTAATTTGGTT...ACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp GAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTCTTCTGCCTGGCATCTTCAATTaGGCTTCCAATTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EPLLKERSLSSFLYFSLLPGIFN*ASNCLS
Trigger: GCTCAGGCAATTGGAAGCCAAATTGAAGATGCCAGG...CAGAAGACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp ATAGTCATGCAGAATCAACTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: IVMQNQLQGHPCSSGPTSVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...TGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAGTTGATTCTGCATGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp GGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTTCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATT +
Preference number: 5 (lower is better)
Translates to: GETSQPRVTGFLKWKSASSNFRL*ILDLLI
Trigger: AATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGA...AGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp AACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGCTTCTCCAACAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: NIPTQGDRVLKVEISFSNNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...GTTGGAGAAGCTGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGAGCTTGGAGCACTAGTTaGAACTCCCTGATGAATAAT +
Preference number: 5 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRAWSTS*NSLMNN
Trigger: ATTATTCATCAGGGAGTTCAAACTAGTGCTCCAAGC...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp ATCCATCATTTCAACAGGATGCCCGTGTCACCACTTTATAACACATGCACGCTATGCAATAACCAATTGTaGAGGAAGGCTTGGAGCACT +
Preference number: 5 (lower is better)
Translates to: IHHFNRMPVSPLYNTCTLCNNQL*RKAWST
Trigger: AGTGCTCCAAGCCTTCCTCAACAATTGGTTATTGCA...TAGCGTGCATGTGTTATAAAGTGGTGACACGGGCATCCTGTTGAAATGATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp TTATCCTTTCCCACTCTCTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTTGCTATCAAGGGAGGTaGACTAACACTTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: LSFPTLSRSWIFCLQGFSCYQGR*TNTLNQ
Trigger: TTGGTTCAAAGTGTTAGTCAACCTCCCTTGATAGCA...ACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAGAGAGTGGGAAAGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS TCA 90 bp TTTGTTGGGGCAGAAGGCATTCCAGAAGGACCAGTTGAACTAACCTaGCTTGTAACAGAAATACTACTAGCAGAGGGCAAAGAACTAACT +
Preference number: 5 (lower is better)
Translates to: FVGAEGIPEGPVELT*LVTEILLAEGKELT
Trigger: AGTTAGTTCTTTGCCCTCTGCTAGTAGTATTTCTGTTACAAGTCAGGTTAGTTCAACTGGTCCTTCTGGAATGCCTTCTGCCCCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCGTTTTGTGTCATCCATaGTTTGAGAAGAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: ELSQELETHPTLGETSQPVLCHP*FEKKEA
Trigger: TGCCTCTTTCTTCTCAAACAATGGATGACACAAAAC...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp TCCTACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: SYTRRNIPTQGDRVLKVEIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...TTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTGCAAGGACATCCTTGCTCATCTGGTCCCACCTCAAATCATCTTTTGCTTAGATCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATT +
Preference number: 5 (lower is better)
Translates to: LQGHPCSSGPTSNHLLLRSNFRL*ILDLLI
Trigger: AATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGA...TCTAAGCAAAAGATGATTTGAGGTGGGACCAGATGAGCAAGGATGTCCTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAACCGTAATCTTTGTATaGGAGACGCCGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKTVIFV*ETPERK
Trigger: TTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS-3UTR CAA 90 bp ACACTAGGAGAAACATCCCAACCCAGGGTGACAGGGTTCTTAAAGTGGAAATCAGGTTTGTGCTATATTTaGTGGTGGAACCAAGTTTGT +
Preference number: 5 (lower is better)
Translates to: TLGETSQPRVTGFLKWKSGLCYI*WWNQVC
Trigger: ACAAACTTGGTTCCACCACAAAATATAGCACAAACC...TGATTTCCACTTTAAGAACCCTGTCACCCTGGGTTGGGATGTTTCTCCTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp TCCTTGTTCTGCAAGGACTTAAGACAAGCCTTAGAACTTGGGATTGGTCCAATTAACCAAATTACCATTTaGGGTAGCAGGGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLFCKDLRQALELGIGPINQITI*GSRGLC
Trigger: GCACAAACCCCTGCTACCCAAAATGGTAATTTGGTT...AATTGGACCAATCCCAAGTTCTAAGGCTTGTCTTAAGTCCTTGCAGAACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTGCTATCAAGGGAGGTaGACTAACACTTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQCYQGR*TNTLNQ
Trigger: TTGGTTCAAAGTGTTAGTCAACCTCCCTTGATAGCA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 90 bp ACGCGCATCAAGAGCAATCATCATCATCTGAACTTAGGGATGCACTaGTTCCACAAAACATCTTATTTTTGTGCTGTGCCCACATTTAGT +
Preference number: 5 (lower is better)
Translates to: TRIKSNHHHLNLGMH*FHKTSYFCAVPTFS
Trigger: ACTAAATGTGGGCACAGCACAAAAATAAGATGTTTTGTGGAACCAGTGCATCCCTAAGTTCAGATGATGATGATTGCTCTTGATGCGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS-3UTR CAA 90 bp GAATTATCCCAGGAGCTAGAAACTCATCCTACACTAGGAGAAACATCCCAACCCATTCAACCAGCTCAATaGAAAGACTTCAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: ELSQELETHPTLGETSQPIQPAQ*KDFSEQ
Trigger: TTGTTCACTGAAGTCTTTCAATTGAGCTGGTTGAAT...GGGTTGGGATGTTTCTCCTAGTGTAGGATGAGTTTCTAGCTCCTGGGATAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGTCCAACTTCCGTCTTTaGATCCTAGATCTGCTTATT +
Preference number: 5 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQSNFRL*ILDLLI
Trigger: AATAAGCAGATCTAGGATCAAAAGACGGAAGTTGGA...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CTTTATGACAACTGCTATCAGCCTATGGCAGTGAGCCATCCATCATTTCAACAGAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: LYDNCYQPMAVSHPSFQQNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...CTGTTGAAATGATGGATGGCTCACTGCCATAGGCTGATAGCAGTTGTCATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CAGATATCATCCATGAAGGCTCTGCTAGAAGAATTCCTTTTGCTGAAGAAGTATGTGGCTGGCTCATCCTaGTGTCTTCTAGACATATTG +
Preference number: 5 (lower is better)
Translates to: QISSMKALLEEFLLLKKYVAGSS*CLLDIL
Trigger: CAATATGTCTAGAAGACACAAGGATGAGCCAGCCAC...ATACTTCTTCAGCAAAAGGAATTCTTCTAGCAGAGCCTTCATGGATGATATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAATGAATAATCCCAGTTaGAGCAGGTGGAACCACTTG +
Preference number: 5 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKMNNPS*SRWNHL
Trigger: CAAGTGGTTCCACCTGCTCAAACTGGGATTATTCAT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGTTGGGTAGCAGGGGTTaGTGCTATATTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQLGSRG*CYILWW
Trigger: CCACCACAAAATATAGCACAAACCCCTGCTACCCAA...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS-3UTR CAA 90 bp GAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTCTTCTGCAATTTGGCTTCCAATaGCCTGAGCTAATGATTGTG +
Preference number: 5 (lower is better)
Translates to: EPLLKERSLSSFLYFSLLQFGFQ*PELMIV
Trigger: CACAATCATTAGCTCAGGCAATTGGAAGCCAAATTG...CAGAAGACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp CCAGCTCAATTGAAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCATGTGTCATCCATTGTTaGAGAAGAAAGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PAQLKDFSEQGFTSAYSACVIHC*RRKRHS
Trigger: ACTGTGCCTCTTTCTTCTCAAACAATGGATGACACA...TGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTTCAATTGAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp TACAGAGAGCCGCTTTTAAAAGAAAGGAGTCTCTCAAGCTTCCTCTATTTCAGTTGTCTTCTAGACATATaGCATGGATCCATTCACCAC +
Preference number: 5 (lower is better)
Translates to: YREPLLKERSLSSFLYFSCLLDI*HGSIHH
Trigger: GTGGTGAATGGATCCATGCAATATGTCTAGAAGACA...ACTGAAATAGAGGAAGCTTGAGAGACTCCTTTCTTTTAAAAGCGGCTCTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486464.1
CDS-3UTR CAA 90 bp AAAGACTTCAGTGAACAAGGATTTACTTCAGCGTATTCAGCAGCTAGATTTCAGAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: KDFSEQGFTSAYSAARFQSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...CTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CAGCGTATTCAGCAGCTAGATTTCAGATTACACAAAGTGAGTAACTGTGCCAAAAATGATTCAGAAAGTTaGTCCTTGTTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: QRIQQLDFRLHKVSNCAKNDSES*SLFCKD
Trigger: GTCCTTGCAGAACAAGGACAAACTTTCTGAATCATT...TTTGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS-3UTR CAA 90 bp CCAATCATTCCACTGCCCTTCAGGATTTTACTAGTCAAATTGTTAACTTTACCTAGTGACACCTTACAATaGTGTAGAGAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: PIIPLPFRILLVKLLTLPSDTLQ*CREHAQ
Trigger: CTGTGCATGTTCTCTACACAATTGTAAGGTGTCACT...AGGTAAAGTTAACAATTTGACTAGTAAAATCCTGAAGGGCAGTGGAATGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000501704.3
ENST00000611198.4
ENST00000622051.1
CDS TCA 90 bp CTGAATACAAACATGACTGTACAATACTTGAGTTTAACGTATAAATaGTCAAGCTTTGTAAAAGTCTGTGCTTCTCTGCAGACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LNTNMTVQYLSLTYK*SSFVKVCASLQTLA
Trigger: GGCCAACGTCTGCAGAGAAGCACAGACTTTTACAAAGCTTGATCATTTATACGTTAAACTCAAGTATTGTACAGTCATGTTTGTATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496314.1
CDS GCA 72 bp GCCTCAGCCCCCTCCTCCCGCCGCGTCGGCGGCCGCTaGAAAGCCCTCCCGGCCGCTCTGCACGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: ASAPSSRRVGGR*KALPAALHGGS
Trigger: GCTGCCTCCGTGCAGAGCGGCCGGGAGGGCTTTGCAGCGGCCGCCGACGCGGCGGGAGGAGGGGGCTGAGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501704.3
CDS GCA 72 bp TGGAGGCGGAGGCTGTGGTCCCGACGTAGAAGATGCTaGAGGGGGCGGCGGCTGAAGCAGCGACGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: WRRRLWSRRRRC*RGRRLKQRRRR
Trigger: CCGCCTCCGTCGCTGCTTCAGCCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TTCTCCTCCTCCTCAGCCAAAGGCGCCGGTCGCTCCTaGCTTCGAGAGCGAGCCCGCTGCTCCCGCGACCGG +
Preference number: 6 (lower is better)
Translates to: FSSSSAKGAGRS*LRERARCSRDR
Trigger: CCGGTCGCGGGAGCAGCGGGCTCGCTCTCGAAGGCAGGAGCGACCGGCGCCTTTGGCTGAGGAGGAGGAGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493016.1
CDS CCA 72 bp AGGGCCCCTTTCTCCCTCCACGGCTGCCGTGGTAGGTaGCTCCACGCTGGCCGAATGGAGACAGCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: RAPFSLHGCRGR*LHAGRMETAPA
Trigger: TGCCGGCGCTGTCTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGTGGAGGGAGAAAGGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS GCA 72 bp TTGTGGAGGCGGAGGCTGTGGTCCCGACGTAGAAGATaGTGCAGGGGGCGGCGGCTGAAGCAGCGACGGAGG +
Preference number: 6 (lower is better)
Translates to: LWRRRLWSRRRR*CRGRRLKQRRR
Trigger: CCTCCGTCGCTGCTTCAGCCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CAA 72 bp GCCGCGGCGGTGGACTCAGGCGGCTGGTGCATTGTGTaGGGTACCGGGGGCGCGGAGGAGACGAGTGCAATT +
Preference number: 6 (lower is better)
Translates to: AAAVDSGGWCIV*GTGGAEETSAI
Trigger: AATTGCACTCGTCTCCTCCGCGCCCCCGGTACCCAACACAATGCACCAGCCGCCTGAGTCCACCGCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TGCCGGAGCCTGGCCAACAGGCTGGACAGATGCCCCTaGAGGTTGTGCTGGGACTGCTGTGGGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: CRSLANRLDRCP*RLCWDCCGLHW
Trigger: CCAGTGCAGCCCACAGCAGTCCCAGCACAACCTGCAGGGGCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp CCGCGGCGGTGGACTCAGGCGGCTGGTGCATTGTGTTaGGTACCGGGGGCGCGGAGGAGACGAGTGCAATTT +
Preference number: 6 (lower is better)
Translates to: PRRWTQAAGALC*VPGARRRRVQF
Trigger: AAATTGCACTCGTCTCCTCCGCGCCCCCGGTACCCAACACAATGCACCAGCCGCCTGAGTCCACCGCCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CCA 72 bp CGAAAGGAGGTTCAGGCTTTGTGGAGGCGGAGGCTGTaGTCCCGACGTAGAAGATGCTGCAGGGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RKEVQALWRRRL*SRRRRCCRGRR
Trigger: CCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTCCTTTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS TCA 72 bp CTTGATGATCCCAGGCAGATGCGGATCCCAGTGCCGTaGAGAGGCGCTTCCCAGATCCGCAGCCGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LDDPRQMRIPVP*RGASQIRSRAP
Trigger: TGGAGCCCGGCTGCGGATCTGGGAAGCGCCTCTTCACGGCACTGGGATCCGCATCTGCCTGGGATCATCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS TCA 72 bp GGTCCCGACGTAGAAGATGCTGCAGGGGGCGGCGGCTaGAGCAGCGACGGAGGCGGAAAATCCTCGGAAGAT +
Preference number: 6 (lower is better)
Translates to: GPDVEDAAGGGG*SSDGGGKSSED
Trigger: ATCTTCCGAGGATTTTCCGCCTCCGTCGCTGCTTCAGCCGCCGCCCCCTGCAGCATCTTCTACGTCGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp CCACTACCGCTGCCCCTTCGAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCGCTAATGTCTGCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: PLPLPLRGNIAG*AIFLALMSAAA
Trigger: CGCCGCTGCAGACATTAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp GGCGCTGCCACTACCGCTGCCCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCTAGCGCTAATGTCTGC +
Preference number: 6 (lower is better)
Translates to: GAATTAAPSREH*RVRHLPSANVC
Trigger: GCAGACATTAGCGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TTTAATACCCGCAGGGCCCCTTTCTCCCTCCACGGCTaGCGTGGTAGGTGGCTCCACGCTGGCCGAATGGAG +
Preference number: 6 (lower is better)
Translates to: FNTRRAPFSLHG*RGRWLHAGRME
Trigger: CTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGTGGAGGGAGAAAGGGGCCCTGCGGGTATTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS CCA 72 bp ACGGCTGCCGTGGTAGGTGGCTCCACGCTGGCCGAATaGAGACAGCGCCGGCATTTCTACGCGCATCAAGAG +
Preference number: 6 (lower is better)
Translates to: TAAVVGGSTLAE*RQRRHFYAHQE
Trigger: CTCTTGATGCGCGTAGAAATGCCGGCGCTGTCTCCATTCGGCCAGCGTGGAGCCACCTACCACGGCAGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487881.2
CDS CCA 72 bp CTGCCAGTAGGTACAGCAGACACTGCTGCCGGAGCCTaGCCAACAGGCTGGACAGATGCCCCTGCAGGTTGT +
Preference number: 6 (lower is better)
Translates to: LPVGTADTAAGA*PTGWTDAPAGC
Trigger: ACAACCTGCAGGGGCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp TCCTCGGAAGATGTGGCATTACTACCGACGCCGGTACCTGCTGCATaGAGAGCAGAGGCGCTGCCACTACCGCTGCCCCTTCGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SSEDVALLPTPVPAA*RAEALPLPLPLRGN
Trigger: GTTCCCTCGAAGGGGCAGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS TCA 72 bp CTTTGTATTGGAGACGCCGGAGAGGAAAACGGGACCTaGCGCTCCGCCTGGCGCGATTCCTCCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LCIGDAGEENGT*RSAWRDSSFSS
Trigger: GGAGGAGAAGGAGGAATCGCGCCAGGCGGAGCGTCAGGTCCCGTTTTCCTCTCCGGCGTCTCCAATACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TTCTCCTCCTCCTCAGCCAAAGGCGCCGGTCGCTCCTaGCTTCGAGAGCGAGCTTCGGAAAGGAGGATGAAC +
Preference number: 6 (lower is better)
Translates to: FSSSSAKGAGRS*LRERASERRMN
Trigger: GTTCATCCTCCTTTCCGAAGCTCGCTCTCGAAGGCAGGAGCGACCGGCGCCTTTGGCTGAGGAGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp GGAAGATGTGGCATTACTACCGACGCCGGTACCTGCTaGATTGAGAGCAGAGGCGCTGCCACTACCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GRCGITTDAGTC*IESRGAATTAA
Trigger: GGCAGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TGCAATCTGACTGCCAGTAGGTACAGCAGACACTGCTaGCGGAGCCTGGCCAACAGGCTGGACAGATGCCCC +
Preference number: 6 (lower is better)
Translates to: CNLTASRYSRHC*RSLANRLDRCP
Trigger: GGGGCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAGTCAGATTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp CTGCAGCTGAGCCTGCGAAAGGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGTGGTCCCGACGTAGAAGATGC +
Preference number: 6 (lower is better)
Translates to: LQLSLRKEVQAL*RRRLWSRRRRC
Trigger: GCATCTTCTACGTCGGGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTCCTTTCGCAGGCTCAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp CTCGGAAGATGTGGCATTACTACCGACGCCGGTACCTaGTGCATTGAGAGCAGAGGCGCTGCCACTACCGCT +
Preference number: 6 (lower is better)
Translates to: LGRCGITTDAGT*CIESRGAATTA
Trigger: AGCGGTAGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACCGGCGTCGGTAGTAATGCCACATCTTCCGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CAA 90 bp GCACTGGCAGCTGGATACCCTGTGGCTGAGCCACAGGAATCACTGTaGTTCCTGCTCCTACTCCTGCAGAACTGGGCTGTCCGGAGGACA +
Preference number: 6 (lower is better)
Translates to: ALAAGYPVAEPQESL*FLLLLLQNWAVRRT
Trigger: TGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGAGCAGGAACAACAGTGATTCCTGTGGCTCAGCCACAGGGTATCCAGCTGCCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp GCGGAGGAGACGAGTGCAATTTCCTTCTGCACCGTAATCTTTGTATaGGAGACGCCGGAGAGGAAAACGGGACCTGACGCTCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: AEETSAISFCTVIFV*ETPERKTGPDAPPG
Trigger: GCCAGGCGGAGCGTCAGGTCCCGTTTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp ACCGGGGGCGCGGAGGAGACGAGTGCAATTTCCTTCTaGACCGTAATCTTTGTATTGGAGACGCCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: TGGAEETSAISF*TVIFVLETPER
Trigger: CCTCTCCGGCGTCTCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCGCCCCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp ACCCTGTGGCTGAGCCACAGGAATCACTGTTGTTCCTaGTCCTACTCCTGCAGAACTGGGCTGTCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: TLWLSHRNHCCS*SYSCRTGLSGG
Trigger: TCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGAGCAGGAACAACAGTGATTCCTGTGGCTCAGCCACAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp GAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTTGTTGTaGCTGCTGCTGCTGCTGCACCACCACAGTAGGGGCTCCCATCTC +
Preference number: 6 (lower is better)
Translates to: EGHTLESWLLLLLLL*LLLLLHHHSRGSHL
Trigger: GAGATGGGAGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp CTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTaGTTGTTGCTGCTGCTGCTGCTGCACCACCACAGTAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LLEGHTLESWLLLLL*LLLLLLLHHHSRGS
Trigger: GGAGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp CACTTGCGAAGATGGAGGAGCACCCTGCTGAATAACTaGAGGTGGAACCTGGGTAGAGGGCTGCTGCACTGC +
Preference number: 6 (lower is better)
Translates to: HLRRWRSTLLNN*RWNLGRGLLHC
Trigger: GCAGTGCAGCAGCCCTCTACCCAGGTTCCACCTTCAGTTATTCAGCAGGGTGCTCCTCCATCTTCGCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 72 bp GGTGGAACCACTTGCGAAGATGGAGGAGCACCCTGCTaGATAACTGAAGGTGGAACCTGGGTAGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GGTTCEDGGAPC*ITEGGTWVEGC
Trigger: GCAGCCCTCTACCCAGGTTCCACCTTCAGTTATTCAGCAGGGTGCTCCTCCATCTTCGCAAGTGGTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp ATTTGCAATCTGACTGCCAGTAGGTACAGCAGACACTaGTGCCGGAGCCTGGCCAACAGGCTGGACAGATGC +
Preference number: 6 (lower is better)
Translates to: ICNLTASRYSRH*CRSLANRLDRC
Trigger: GCATCTGTCCAGCCTGTTGGCCAGGCTCCGGCAGCAGTGTCTGCTGTACCTACTGGCAGTCAGATTGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp TTGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTTGTaGTTGCTGCTGCTGCTGCTGCACCACCACAGTAGGGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LEGHTLESWLLLLLL*LLLLLLHHHSRGSH
Trigger: ATGGGAGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp CATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTaGTTGTTGTTGCTGCTGCTGCTGCTGCACCACCACAGTAGGGGC +
Preference number: 6 (lower is better)
Translates to: HLLEGHTLESWLLLL*LLLLLLLLHHHSRG
Trigger: GCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp GCTGGTTGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTaGTGCTGCACCACCACAGTAGGGGCTCCCATCTCT +
Preference number: 6 (lower is better)
Translates to: AGCCCCCCCCCC*CCTTTVGAPIS
Trigger: AGAGATGGGAGCCCCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp GAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTaGTTGTTGTTGCTGCTGCTGCTGCTGCACCACCAC +
Preference number: 6 (lower is better)
Translates to: EGHTLESWLLLL*LLLLLLLLHHH
Trigger: GTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp GGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTaGTTGTTGCTGCTGCTGCTGCTGCACCACCACAGT +
Preference number: 6 (lower is better)
Translates to: GHTLESWLLLLL*LLLLLLLHHHS
Trigger: ACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp TTGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTaGTTGTTGTTGTTGCTGCTGCTGCTGCTGCACCAC +
Preference number: 6 (lower is better)
Translates to: LEGHTLESWLLL*LLLLLLLLLHH
Trigger: GTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp ATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTaGTTGTTGTTGTTGCTGCTGCTGCTGCTGCACCACCACAGTAGG +
Preference number: 6 (lower is better)
Translates to: IHLLEGHTLESWLLL*LLLLLLLLLHHHSR
Trigger: CCTACTGTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp TCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGACCCCTaGCGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCT +
Preference number: 6 (lower is better)
Translates to: SVSKGSVEKVDP*RQKLSVVLAVS
Trigger: AGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437455.2
ENST00000460842.5
ENST00000486464.1
CDS TCA 72 bp GCTTCCAGTTGTAGAGAGTTTTCTAGATACTGGGCTTaGGGGTGGCCCACCAGTAATGGATGCACTGGCCAC +
Preference number: 6 (lower is better)
Translates to: ASSCREFSRYWA*GWPTSNGCTGH
Trigger: GTGGCCAGTGCATCCATTACTGGTGGGCCACCCTCAAGCCCAGTATCTAGAAAACTCTCTACAACTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp CATTGTGTTGGGTACCGGGGGCGCGGAGGAGACGAGTaGAATTTCCTTCTGCACCGTAATCTTTGTATTGGA +
Preference number: 6 (lower is better)
Translates to: HCVGYRGRGGDE*NFLLHRNLCIG
Trigger: TCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGTCTCCTCCGCGCCCCCGGTACCCAACACAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp ATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTTaGTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ICWRVTPWRAGC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp ACCAACCACATTTACAGGCGATGGCTGGATACCAGTTaGAGCACTCATAGTGGCTTGCAGAGGTACTGGCTG +
Preference number: 6 (lower is better)
Translates to: TNHIYRRWLDTS*STHSGLQRYWL
Trigger: CAGCCAGTACCTCTGCAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCATCGCCTGTAAATGTGGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp GGTCTTGGCTGTATCTGTGGTTCTAGGATCACTCCTTaGACCTCTGGTAGGAGAGAAGCACTCTCATCCTCG +
Preference number: 6 (lower is better)
Translates to: GLGCICGSRITP*TSGRREALSSS
Trigger: CGAGGATGAGAGTGCTTCTCTCCTACCAGAGGTGCAAGGAGTGATCCTAGAACCACAGATACAGCCAAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460842.5
CDS CCA 72 bp CTCCAGAAGCTGGATATTCTGTCTCCAAGGGTTCAGTaGAGAAAGTGGACCCCTGACGTCAAAAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: LQKLDILSPRVQ*RKWTPDVKSSP
Trigger: CGGAGAGCTTTTGACGTCAGGGGTCCACTTTCTCCACTGAACCCTTGGAGACAGAATATCCAGCTTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437455.2
ENST00000460842.5
ENST00000486464.1
CDS CCA 72 bp GAAACCATTGGTTGCTGTTGTCCATACTGTAACTGTTaGGGTGGTGGTGCCCCTGGAAGGGGAGTTTGCACT +
Preference number: 6 (lower is better)
Translates to: ETIGCCCPYCNC*GGGAPGRGVCT
Trigger: AGTGCAAACTCCCCTTCCAGGGGCACCACCACCCCAACAGTTACAGTATGGACAACAGCAACCAATGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 72 bp CATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTaGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HLLEGHTLESWL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp CGATGGCTGGATACCAGTTGCAGCACTCATAGTGGCTaGCAGAGGTACTGGCTGAAGACCTTGCTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: RWLDTSCSTHSG*QRYWLKTLLLL
Trigger: CAGCAAAAGCAAGGTCTTCAGCCAGTACCTCTGCAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp ACCAAAATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTTGTaGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCACCACCAC +
Preference number: 6 (lower is better)
Translates to: TKIHLLEGHTLESWL*LLLLLLLLLLLHHH
Trigger: GTGGTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp GCTACCAAAATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTaGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCACCAC +
Preference number: 6 (lower is better)
Translates to: ATKIHLLEGHTLESW*LLLLLLLLLLLLHH
Trigger: GTGGTGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp CTGTGGACCAGTGCTACCAAAATCCATCTGTTGGAGGGTCACACCTaGGAGAGCTGGTTGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LWTSATKIHLLEGHT*ESWLLLLLLLLLLL
Trigger: CAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp CCTCGAAGTGTTAACTGTTGGTTGTTGCTGCTGACTTaGAACCGATCCCCCAGTCATCCCTGCAGCTGCATT +
Preference number: 6 (lower is better)
Translates to: PRSVNCWLLLLT*NRSPSHPCSCI
Trigger: AATGCAGCTGCAGGGATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAACAGTTAACACTTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp CTGAACCTCGAAGTGTTAACTGTTGGTTGTTGCTGCTaGCTTGAAACCGATCCCCCAGTCATCCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LNLEVLTVGCCC*LETDPPVIPAA
Trigger: AGCTGCAGGGATGACTGGGGGATCGGTTTCAAGTCAGCAGCAACAACCAACAGTTAACACTTCGAGGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp ACATGGCCTGGGGCCATCTGTGTAGAAACCATTGGTTaGTGTTGTCCATACTGTAACTGTTGGGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: TWPGAICVETIG*CCPYCNCWGGG
Trigger: ACCACCACCCCAACAGTTACAGTATGGACAACAGCAACCAATGGTTTCTACACAGATGGCCCCAGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp TTGAACTCCCTGATGAATAATCCCAGTTTGAGCAGGTaGAACCACTTGCGAAGATGGAGGAGCACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LNSLMNNPSLSR*NHLRRWRSTLL
Trigger: CAGCAGGGTGCTCCTCCATCTTCGCAAGTGGTTCCACCTGCTCAAACTGGGATTATTCATCAGGGAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 72 bp ACGAGTGCAATTTCCTTCTGCACCGTAATCTTTGTATaGGAGACGCCGGAGAGGAAAACGGGACCTGACGCT +
Preference number: 6 (lower is better)
Translates to: TSAISFCTVIFV*ETPERKTGPDA
Trigger: AGCGTCAGGTCCCGTTTTCCTCTCCGGCGTCTCCAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS CAA 72 bp ATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTGGTaGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: IHLLEGHTLESW*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp ATTTACAGGCGATGGCTGGATACCAGTTGCAGCACTCATAGTGGCTaGCAGAGGTACTGGCTGAAGACCTTGCTTTTGCTGATAGCTCAG +
Preference number: 6 (lower is better)
Translates to: IYRRWLDTSCSTHSG*QRYWLKTLLLLIAQ
Trigger: CTGAGCTATCAGCAAAAGCAAGGTCTTCAGCCAGTACCTCTGCAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCATCGCCTGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp TTGTTCCTGCTCCTACTCCTGCAGAACTGGGCTGTCCGGAGGACATaGCTGTTTGAAGAATTGGCTGCTGTTGTACATACTCTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LFLLLLLQNWAVRRT*LFEELAAVVHTLKQ
Trigger: CTGCTTCAGAGTATGTACAACAGCAGCCAATTCTTCAAACAGCAATGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGAGCAGGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp TGGAACCTGGGTAGAGGGCTGCTGCACTGCAGTAGGTATGTTTGCTaGCTGACCAATATTTGCAATCTGACTGCCAGTAGGTACAGCAGA +
Preference number: 6 (lower is better)
Translates to: WNLGRGLLHCSRYVC*LTNICNLTASRYSR
Trigger: TCTGCTGTACCTACTGGCAGTCAGATTGCAAATATTGGTCAGCAAGCAAACATACCTACTGCAGTGCAGCAGCCCTCTACCCAGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 72 bp CCTGCAGAACTGGGCTGTCCGGAGGACATTGCTGTTTaGAGAATTGGCTGCTGTTGTACATACTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: PAELGCPEDIAV*RIGCCCTYSEA
Trigger: TGCTTCAGAGTATGTACAACAGCAGCCAATTCTTCAAACAGCAATGTCCTCCGGACAGCCCAGTTCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp TCCTACTCCTGCAGAACTGGGCTGTCCGGAGGACATTaGTGTTTGAAGAATTGGCTGCTGTTGTACATACTC +
Preference number: 6 (lower is better)
Translates to: SYSCRTGLSGGH*CLKNWLLLYIL
Trigger: GAGTATGTACAACAGCAGCCAATTCTTCAAACAGCAATGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp CTGGGTAGAGGGCTGCTGCACTGCAGTAGGTATGTTTaGTTGCTGACCAATATTTGCAATCTGACTGCCAGT +
Preference number: 6 (lower is better)
Translates to: LGRGLLHCSRYV*LLTNICNLTAS
Trigger: ACTGGCAGTCAGATTGCAAATATTGGTCAGCAAGCAAACATACCTACTGCAGTGCAGCAGCCCTCTACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp TCGCCACTGGTCTACACCATTGGGATTTCATGCAATTaGAGCCAAAAACACCGTTTAAGGGAGTCAGACCCC +
Preference number: 6 (lower is better)
Translates to: SPLVYTIGISCN*SQKHRLRESDP
Trigger: GGGGTCTGACTCCCTTAAACGGTGTTTTTGGCTGCAATTGCATGAAATCCCAATGGTGTAGACCAGTGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472477.1
CDS CCA 72 bp ACCAGTTGCAGCACTCATAGTGGCTTGCAGAGGTACTaGCTGAAGACCTTGCTTTTGCTGATAGCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: TSCSTHSGLQRY*LKTLLLLIAQF
Trigger: GAACTGAGCTATCAGCAAAAGCAAGGTCTTCAGCCAGTACCTCTGCAAGCCACTATGAGTGCTGCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp GCTGAAGTTACACCAACCACATTTACAGGCGATGGCTaGATACCAGTTGCAGCACTCATAGTGGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: AEVTPTTFTGDG*IPVAALIVACR
Trigger: TCTGCAAGCCACTATGAGTGCTGCAACTGGTATCCAGCCATCGCCTGTAAATGTGGTTGGTGTAACTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp CCGCCTGAGAATATGGTAGCTGGGGTTGAGCCAAACTaGAAATGGAAGGCTGCTGACCTAAAGCTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: PPENMVAGVEPN*KWKAADLKLKL
Trigger: TAACTTCAGCTTTAGGTCAGCAGCCTTCCATTTCCAGTTTGGCTCAACCCCAGCTACCATATTCTCAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 72 bp AATACTCTGTGGACCAGTGCTACCAAAATCCATCTGTaGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: NTLWTSATKIHL*EGHTLESWLLL
Trigger: CAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp CTCCTACTCCTGCAGAACTGGGCTGTCCGGAGGACATaGCTGTTTGAAGAATTGGCTGCTGTTGTACATACT +
Preference number: 6 (lower is better)
Translates to: LLLLQNWAVRRT*LFEELAAVVHT
Trigger: AGTATGTACAACAGCAGCCAATTCTTCAAACAGCAATGTCCTCCGGACAGCCCAGTTCTGCAGGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 72 bp GGTAGAGGGCTGCTGCACTGCAGTAGGTATGTTTGCTaGCTGACCAATATTTGCAATCTGACTGCCAGTAGG +
Preference number: 6 (lower is better)
Translates to: GRGLLHCSRYVC*LTNICNLTASR
Trigger: CCTACTGGCAGTCAGATTGCAAATATTGGTCAGCAAGCAAACATACCTACTGCAGTGCAGCAGCCCTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp AACTGCTGGAATACTCTGTGGACCAGTGCTACCAAAATCCATCTGTaGGAGGGTCACACCTTGGAGAGCTGGTTGTTGCTGTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: NCWNTLWTSATKIHL*EGHTLESWLLLLLL
Trigger: CAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACAGAGTATTCCAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp TGTATAGTGACTCAGTGTGCTGACACTACTGCTCACTaGACTCCCACTAGTGCTCTCCCTTTCAGAAGTCAC +
Preference number: 6 (lower is better)
Translates to: CIVTQCADTTAH*TPTSALPFRSH
Trigger: GTGACTTCTGAAAGGGAGAGCACTAGTGGGAGTTCAGTGAGCAGTAGTGTCAGCACACTGAGTCACTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS TCA 72 bp GCACGCCTGGCATCTTCAATTTGGCTTCCAATTGCCTaGGCTAATGATTGTGCGGAGAACTGGGTAGAACTT +
Preference number: 6 (lower is better)
Translates to: ARLASSIWLPIA*ANDCAENWVEL
Trigger: AAGTTCTACCCAGTTCTCCGCACAATCATTAGCTCAGGCAATTGGAAGCCAAATTGAAGATGCCAGGCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000486464.1
CDS CCA 72 bp ACACCAGCAGCCTTGTATAAGCTAGATAAAATCTTCTaGCTTTCCGCAGCCCAGGGAGAAACAGAAAACGGC +
Preference number: 6 (lower is better)
Translates to: TPAALYKLDKIF*LSAAQGETENG
Trigger: GCCGTTTTCTGTTTCTCCCTGGGCTGCGGAAAGCCAGAAGATTTTATCTAGCTTATACAAGGCTGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261489.6
CDS CCA 72 bp AAAATCCATCTGTTGGAGGGTCACACCTTGGAGAGCTaGTTGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: KIHLLEGHTLES*LLLLLLLLLLL
Trigger: CAGCAGCAGCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CCA 72 bp GTGCTACCAAAATCCATCTGTTGGAGGGTCACACCTTaGAGAGCTGGTTGTTGCTGTTGTTGTTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: VLPKSICWRVTP*RAGCCCCCCCC
Trigger: GCAACAACAACAACAACAGCAACAACCAGCTCTCCAAGGTGTGACCCTCCAACAGATGGATTTTGGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp ATCGCCACTGGTCTACACCATTGGGATTTCATGCAATaGCAGCCAAAAACACCGTTTAAGGGAGTCAGACCC +
Preference number: 6 (lower is better)
Translates to: IATGLHHWDFMQ*QPKTPFKGVRP
Trigger: GGGTCTGACTCCCTTAAACGGTGTTTTTGGCTGCAATTGCATGAAATCCCAATGGTGTAGACCAGTGGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472477.1
CDS CAA 72 bp TCAAGCTTTGTAAAAGTCTGTGCTTCTCTGCAGACGTaGGCCAGAAACGCCCAAGTAAGGCTTCCTGAGACT +
Preference number: 6 (lower is better)
Translates to: SSFVKVCASLQT*ARNAQVRLPET
Trigger: AGTCTCAGGAAGCCTTACTTGGGCGTTTCTGGCCAACGTCTGCAGAGAAGCACAGACTTTTACAAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496314.1
CDS TCA 72 bp ATTGGCTGCTGTTGTACATACTCTGAAGCAGGATTTTaGGTCACTGATTTGACATGGCCTGGGGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: IGCCCTYSEAGF*VTDLTWPGAIC
Trigger: ACAGATGGCCCCAGGCCATGTCAAATCAGTGACTCAAAATCCTGCTTCAGAGTATGTACAACAGCAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 72 bp AGCAGAGGGCAAAGAACTAACTGCAGGCAACTGCTGTaGAACAATTCCTTGAGCTACTGGTTCTACTCCTTG +
Preference number: 6 (lower is better)
Translates to: SRGQRTNCRQLL*NNSLSYWFYSL
Trigger: CAAGGAGTAGAACCAGTAGCTCAAGGAATTGTTTCACAGCAGTTGCCTGCAGTTAGTTCTTTGCCCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp GATCCATCGCCACTGGTCTACACCATTGGGATTTCATaGAATTGCAGCCAAAAACACCGTTTAAGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: DPSPLVYTIGIS*NCSQKHRLRES
Trigger: TGACTCCCTTAAACGGTGTTTTTGGCTGCAATTGCATGAAATCCCAATGGTGTAGACCAGTGGCGATGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472477.1
CDS CCA 72 bp GAGAATATGGTAGCTGGGGTTGAGCCAAACTGGAAATaGAAGGCTGCTGACCTAAAGCTGAAGTTACACCAA +
Preference number: 6 (lower is better)
Translates to: ENMVAGVEPNWK*KAADLKLKLHQ
Trigger: TTGGTGTAACTTCAGCTTTAGGTCAGCAGCCTTCCATTTCCAGTTTGGCTCAACCCCAGCTACCATATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 72 bp GGGTTTGTGCTATATTTTGTGGTGGAACCAAGTTTGTaGGGGCAGAAGGCATTCCAGAAGGACCAGTTGAAC +
Preference number: 6 (lower is better)
Translates to: GFVLYFVVEPSL*GQKAFQKDQLN
Trigger: GTTCAACTGGTCCTTCTGGAATGCCTTCTGCCCCAACAAACTTGGTTCCACCACAAAATATAGCACAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CAA 90 bp TTGGGATGCAATAACCAATTGTTGAGGAAGGCTTGGAGCACTAGTTaGAACTCCCTGATGAATAATCCCAGTTTGAGCAGGTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: LGCNNQLLRKAWSTS*NSLMNNPSLSRWNH
Trigger: GTGGTTCCACCTGCTCAAACTGGGATTATTCATCAGGGAGTTCAAACTAGTGCTCCAAGCCTTCCTCAACAATTGGTTATTGCATCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS TCA 72 bp GCTATACTGTTGTTAGAGCTGATACTAGCGGAGATCTaGGCAGGAGTAACGCTAGTTATCTGGAAGCCACTT +
Preference number: 6 (lower is better)
Translates to: AILLLELILAEI*AGVTLVIWKPL
Trigger: AAGTGGCTTCCAGATAACTAGCGTTACTCCTGCTCAGATCTCCGCTAGTATCAGCTCTAACAACAGTATAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458659.3
ENST00000493016.1
ENST00000501704.3
CDS GCA 72 bp TCAGGACTGGCCAGTGTCTTCAGCAGATTGTTCTCCTaGTCCAGCTGGGAATTTTTCTCTATTAGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SGLASVFSRLFS*SSWEFFSISSL
Trigger: CAAAGAACTAATAGAGAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCTGAAGACACTGGCCAGTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261489.6
ENST00000458659.3
ENST00000487881.2
ENST00000496314.1
ENST00000496838.1
ENST00000611198.4
ENST00000622051.1
CDS TCA 72 bp GTTTGTTGGGGCAGAAGGCATTCCAGAAGGACCAGTTaGACTAACCTGACTTGTAACAGAAATACTACTAGC +
Preference number: 6 (lower is better)
Translates to: VCWGRRHSRRTS*TNLTCNRNTTS
Trigger: GCTAGTAGTATTTCTGTTACAAGTCAGGTTAGTTCAACTGGTCCTTCTGGAATGCCTTCTGCCCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS CCA 72 bp AATACTCTGTGGTATACTAACTGCTGGAATACTCTGTaGACCAGTGCTACCAAAATCCATCTGTTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: NTLWYTNCWNTL*TSATKIHLLEG
Trigger: ACCCTCCAACAGATGGATTTTGGTAGCACTGGTCCACAGAGTATTCCAGCAGTTAGTATACCACAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp GCATTAGGAACACTGCTAACAGCAGCAGAGGAAGAAATAGTACCATaGCCCATGCCACTCAAGATATTCACATTAACACCACTGGTAACT +
Preference number: 6 (lower is better)
Translates to: ALGTLLTAAEEEIVP*PMPLKIFTLTPLVT
Trigger: AGTTACCAGTGGTGTTAATGTGAATATCTTGAGTGGCATGGGCAATGGTACTATTTCTTCCTCTGCTGCTGTTAGCAGTGTTCCTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 90 bp ACTCCCACTAGTGCTCTCCCTTTCAGAAGTCACTTCTATCGGATTTaGCTTTACAGTCTCCACCACTTTATTTATCAGCACACCTTCTGT +
Preference number: 6 (lower is better)
Translates to: TPTSALPFRSHFYRI*LYSLHHFIYQHTFC
Trigger: ACAGAAGGTGTGCTGATAAATAAAGTGGTGGAGACTGTAAAGCAAAATCCGATAGAAGTGACTTCTGAAAGGGAGAGCACTAGTGGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS GCA 72 bp AGATTCATCCAGATCATCATAGCTCTCAGTGTCCTCTaGTATACTGTTGTTAGAGCTGATACTAGCGGAGAT +
Preference number: 6 (lower is better)
Translates to: RFIQIIIALSVL*YTVVRADTSGD
Trigger: ATCTCCGCTAGTATCAGCTCTAACAACAGTATAGCAGAGGACACTGAGAGCTATGATGATCTGGATGAATCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000501704.3
CDS CAA 72 bp GGGAGGTTGACTAACACTTTGAACCAAATTACCATTTaGGGTAGCAGGGGTTTGTGCTATATTTTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GRLTNTLNQITI*GSRGLCYILWW
Trigger: CCACCACAAAATATAGCACAAACCCCTGCTACCCAAAATGGTAATTTGGTTCAAAGTGTTAGTCAACCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000486464.1
CDS CAA 90 bp TGCTATCAAGGGAGGTTGACTAACACTTTGAACCAAATTACCATTTaGGGTAGCAGGGGTTTGTGCTATATTTTGTGGTGGAACCAAGTT +
Preference number: 6 (lower is better)
Translates to: CYQGRLTNTLNQITI*GSRGLCYILWWNQV
Trigger: AACTTGGTTCCACCACAAAATATAGCACAAACCCCTGCTACCCAAAATGGTAATTTGGTTCAAAGTGTTAGTCAACCTCCCTTGATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458659.3
CDS GCA 72 bp TGGTATCTGTTGTGCCAAAGGCAAATTTGTATTAGTTaGTATCAAGGGAGGTTGACTAACACTTTGAACCAA +
Preference number: 6 (lower is better)
Translates to: WYLLCQRQICIS*YQGRLTNTLNQ
Trigger: TTGGTTCAAAGTGTTAGTCAACCTCCCTTGATAGCAACTAATACAAATTTGCCTTTGGCACAACAGATACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458659.3
ENST00000486464.1
CDS CCA 72 bp ATTTTAGTAAGCCACAAAGGACTAAATTACATAATGTaGGGAAAGCCTGTTCTCTGGCCAGACTTGCAAAAA +
Preference number: 6 (lower is better)
Translates to: ILVSHKGLNYIM*GKPVLWPDLQK
Trigger: TTTTTGCAAGTCTGGCCAGAGAACAGGCTTTCCCCACATTATGTAATTTAGTCCTTTGTGGCTTACTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496838.1
CDS TCA 72 bp AACATGACTGTACAATACTTGAGTTTAACGTATAAATaGTCAAGCTTTGTAAAAGTCTGTGCTTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: NMTVQYLSLTYK*SSFVKVCASLQ
Trigger: CTGCAGAGAAGCACAGACTTTTACAAAGCTTGATCATTTATACGTTAAACTCAAGTATTGTACAGTCATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496314.1