RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165699

Ensembl transcript IDs: ENST00000298552.9, ENST00000403810.6, ENST00000440111.6, ENST00000461879.5, ENST00000475903.6, ENST00000490179.3, ENST00000545250.5, ENST00000642249.1, ENST00000642261.1, ENST00000642344.1, ENST00000642617.1, ENST00000642627.1, ENST00000642646.1, ENST00000642745.1, ENST00000642811.1, ENST00000642854.1, ENST00000643072.1, ENST00000643275.1, ENST00000643362.1, ENST00000643583.1, ENST00000643625.1, ENST00000643691.1, ENST00000643875.1, ENST00000644097.1, ENST00000644184.1, ENST00000644255.1, ENST00000644319.1, ENST00000644882.1, ENST00000644997.1, ENST00000645129.1, ENST00000645150.1, ENST00000645346.1, ENST00000645901.1, ENST00000645904.1, ENST00000646391.1, ENST00000646440.1, ENST00000646625.1, ENST00000646788.1, ENST00000646831.1, ENST00000647078.1, ENST00000647262.1, ENST00000647279.1, ENST00000647462.1, ENST00000647506.1

Found 5380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGCTGCCTCCACCACCTCTGCTTCCACTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCT +
Preference number: 1 (lower is better)
Translates to: CCCLHHLCFHYCPGR*WAWGSWSHRCGQMP
Trigger: AGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAGTGGAAGCAGAGGTGGTGGAGGCAGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp AGAGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAG +
Preference number: 1 (lower is better)
Translates to: RVSAGGGRHPISPRS*PGLRSAQTLLQPVQ
Trigger: CTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp TGCTGCCTCCACCACCTCTGCTTCCACTACTGCCCCGGGCGCTGCTaGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTT +
Preference number: 1 (lower is better)
Translates to: CCLHHLCFHYCPGRC*AWGSWSHRCGQMPL
Trigger: AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAGTGGAAGCAGAGGTGGTGGAGGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp CCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCTGCTGCTGCTGCTGCCTCCACCACC +
Preference number: 1 (lower is better)
Translates to: PPTAEWACPLVWGFL*GRKLAAAAAAASTT
Trigger: GGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GCCCAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTaGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAG +
Preference number: 1 (lower is better)
Translates to: AQACPGRSVKAQGSR*RPENWRLPSGSSAE
Trigger: CTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp CTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCAC +
Preference number: 1 (lower is better)
Translates to: LPRALLGLGVLVSPL*PDASSLCPTMESEH
Trigger: GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp CTCCACCACCTCTGCTTCCACTACTGCCCCGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGT +
Preference number: 1 (lower is better)
Translates to: LHHLCFHYCPGRCWA*GSWSHRCGQMPLHC
Trigger: ACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAGTGGAAGCAGAGGTGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGT +
Preference number: 1 (lower is better)
Translates to: GRSVKAQGSRWRPEN*RLPSGSSAENLGDC
Trigger: ACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp CATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: HSRLPPTAEWACPLV*GFLWGRKLAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: SPIVVSHRLLNGPAL*CGGFSGVESSLLLL
Trigger: CAGCAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GCTGGCAGACGCTTCTCCCATAGTCGTCTCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTC +
Preference number: 1 (lower is better)
Translates to: AGRRFSHSRLPPTAE*ACPLVWGFLWGRKL
Trigger: GAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGAAGCGTCTGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp AGACGCTTCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTaGCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCT +
Preference number: 1 (lower is better)
Translates to: RRFSHSRLPPTAEWA*PLVWGFLWGRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGAAGCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTaGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCTCGAGG +
Preference number: 1 (lower is better)
Translates to: ALRTGGCRVGLPLRT*ETVSVKGRVKASSR
Trigger: CCTCGAGGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp AGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATaGAAGAGACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCC +
Preference number: 1 (lower is better)
Translates to: SYSSLRRADKDCRTA*KRQEHAPLGTSKSP
Trigger: GGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CCTTGTAGCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGACAGGAACACGCTCCCCTGGGCACA +
Preference number: 1 (lower is better)
Translates to: PCSYSYSSLRRADKD*RTAWKRQEHAPLGT
Trigger: TGTGCCCAGGGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGCTACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp ATAAGGACTGCAGGACGGCATGGAAGAGACAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGA +
Preference number: 1 (lower is better)
Translates to: IRTAGRHGRDRNTLP*AHRRVPDRQTSHMG
Trigger: TCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp GGGTCGGGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCT +
Preference number: 1 (lower is better)
Translates to: GSGETGEGHLGSGES*LPHPSLCPVLSLGS
Trigger: AGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp GGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGCACTTCCATTGGGGAGGTAGAGGGC +
Preference number: 1 (lower is better)
Translates to: GKGNLFSSLLCASAP*CISLSSTSIGEVEG
Trigger: GCCCTCTACCTCCCCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTTGCCTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp CTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAGGCTGGGAATCAGTCACACCCAGAA +
Preference number: 1 (lower is better)
Translates to: LTIQYQLPACARLSS*DHALPQAGNQSHPE
Trigger: TTCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp ACTGATCTTTCATGGCAGCATTATGTTCCTCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCT +
Preference number: 1 (lower is better)
Translates to: TDLSWQHYVPPELLL*SPCGGAACSGGHAA
Trigger: AGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGAAAGATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp ACCACGCCCTGCCACAGGCTGGGAATCAGTCACACCCAGAAAGCCTaGCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCT +
Preference number: 1 (lower is better)
Translates to: TTPCHRLGISHTQKA*LNRFSAGIARVTES
Trigger: AGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp GGAAGCTCCTCTGCCATCATTAACTCGTTTCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCTTCCAGGCAGGCTTCCCTTGTAGCT +
Preference number: 1 (lower is better)
Translates to: GSSSAIINSFHDQKP*AQVLGSSRQASLVA
Trigger: AGCTACAAGGGAAGCCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATGAAACGAGTTAATGATGGCAGAGGAGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CTTCAACTGATCTTTCATGGCAGCATTATGTTCCTCCAGAGCTGCTaGTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATG +
Preference number: 1 (lower is better)
Translates to: LQLIFHGSIMFLQSC*FDHLAEEPPVPEGM
Trigger: CATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGAAAGATCAGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp CTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGC +
Preference number: 1 (lower is better)
Translates to: LGVLVSPLWPDASSL*PTMESEHPSLQQSS
Trigger: GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGA +
Preference number: 1 (lower is better)
Translates to: IRGRLPASKAHSRRR*NFTRTGSEDTGLQR
Trigger: TCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp CAGGAGCACTTGTTGAGTTTGGATTCTCTGCCACTGCCAATTTTCTaGCTAGTGTCATCTCTCGGGAGCACGTGGGGCAGCCTAGTGGGT +
Preference number: 1 (lower is better)
Translates to: QEHLLSLDSLPLPIF*LVSSLGSTWGSLVG
Trigger: ACCCACTAGGCTGCCCCACGTGCTCCCGAGAGATGACACTAGTCAGAAAATTGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp CATGTACCCTGGAGAGTGAAGGTGCAGCAGATAGGTATACTGATTTaGGTCACTCCACACCAGGCAGCTTCCTTCTCCAGGTGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: HVPWRVKVQQIGILI*VTPHQAASFSRWGR
Trigger: TCTGCCCCACCTGGAGAAGGAAGCTGCCTGGTGTGGAGTGACTCAAATCAGTATACCTATCTGCTGCACCTTCACTCTCCAGGGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp GGGTCAGCTTCACCAGAAAGCAGAGGAGAGAGCAGGCACACTAGTTaGCACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGG +
Preference number: 1 (lower is better)
Translates to: GSASPESRGESRHTS*HHTCGGSVISRVDG
Trigger: CCCATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGTCAACTAGTGTGCCTGCTCTCTCCTCTGCTTTCTGGTGAAGCTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR TCA 90 bp GTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTATGGAGAACAGGTTTTACCACCTACA +
Preference number: 1 (lower is better)
Translates to: VQFLMLKCFSGNLSQ*LLLPSYGEQVLPPT
Trigger: TGTAGGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp AGGGAGGCCAGTAGACAGAAGGGTTTAACAAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCG +
Preference number: 1 (lower is better)
Translates to: REASRQKGLTKGPAS*DGLKVQFLMLKCFS
Trigger: CGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTTTGTTAAACCCTTCTGTCTACTGGCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp TGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGACGTG +
Preference number: 1 (lower is better)
Translates to: CGGSVISRVDGELRV*GSCPGIFNNISRDV
Trigger: CACGTCTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp CAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAGAAGTCTGGCATTCCCTGTCTCCCG +
Preference number: 1 (lower is better)
Translates to: QSPLSSEVEFYKDWE*RYWSPKKSGIPCLP
Trigger: CGGGAGACAGGGAATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp AGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAGAACAGGTTTTACCACCTACACACC +
Preference number: 1 (lower is better)
Translates to: SSSCSSASRVTSPSD*SFPPMENRFYHLHT
Trigger: GGTGTGTAGGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CATAGAGTAACTGGTTGTGCAGTAAAAGCAACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAGGAGAGCCTCCAAAGTGGGTCCAGT +
Preference number: 1 (lower is better)
Translates to: HRVTGCAVKATGLGG*GSHLKEESLQSGSS
Trigger: ACTGGACCCACTTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCACAACCAGTTACTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp GGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGC +
Preference number: 1 (lower is better)
Translates to: GHLGSGESWLPHPSL*PVLSLGSQKGYWSC
Trigger: GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GAGGTAGTGGGGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTCCAGATTTCTGAAACAGGCTTCTGT +
Preference number: 1 (lower is better)
Translates to: EVVGEEETRAFPKGV*SPQCQLQISETGFC
Trigger: ACAGAAGCCTGTTTCAGAAATCTGGAGCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCCCCACTACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp TGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTaGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTT +
Preference number: 1 (lower is better)
Translates to: CKGTFHKGDERVRTH*HGDGRDRLPPRGLV
Trigger: AACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR CCA 90 bp ATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTaGCATTCCCTGTCTCCCGCAGGGCTTTCATCAGCACTGCCGCAG +
Preference number: 1 (lower is better)
Translates to: ILQGLGVKILVSKEV*HSLSPAGLSSALPQ
Trigger: CTGCGGCAGTGCTGATGAAAGCCCTGCGGGAGACAGGGAATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp ACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTaGGCACCCGTCATTACAACAGTCAAGCCTTTCTTCTGCTGCTTC +
Preference number: 1 (lower is better)
Translates to: TVVARCLFIVPYHGI*APVITTVKPFFCCF
Trigger: GAAGCAGCAGAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp CCATCATTCCTTAGCTGTGTTCATGATGAGTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACACTGTCCGGGGTCGGGGGAGACGGGT +
Preference number: 1 (lower is better)
Translates to: PSFLSCVHDESHCSP*YVAVQHCPGSGETG
Trigger: ACCCGTCTCCCCCGACCCCGGACAGTGTTGGACAGCTACATATCATGGACTACAATGAGACTCATCATGAACACAGCTAAGGAATGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp TACACAGCCAGCCTTTGCCAGCATTCTCCCGGACTCTGTTTAGACTaGTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: YTASLCQHSPGLCLD*SAITNMESVMTSAP
Trigger: GGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp GGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCAC +
Preference number: 1 (lower is better)
Translates to: GDEVARVHSIKAMKE*VHTGMEMDEIDFRH
Trigger: GTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp GGACCTTCAGAGCCTTTCTGCTGCAGTGTCACATATAAGCTGACATaGACAAGAGGCGTATGCACACAAAGGGAGGCCAGTAGACAGAAG +
Preference number: 1 (lower is better)
Translates to: GPSEPFCCSVTYKLT*TRGVCTQREASRQK
Trigger: CTTCTGTCTACTGGCCTCCCTTTGTGTGCATACGCCTCTTGTTCATGTCAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGAAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp GAGGTGCTTGAGAGAGCTTATGCTTCCAAGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGAGGATGGATAAACGAGTGGCGGCTT +
Preference number: 1 (lower is better)
Translates to: EVLERAYASKMAAVL*HDPVTRGWINEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGGGTCATGTCATAAGACTGCAGCCATCTTGGAAGCATAAGCTCTCTCAAGCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR GCA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCTGAAAGATACAGACCAGCCAGAATA +
Preference number: 1 (lower is better)
Translates to: FKHLGYPFLSLIPAL*GLQLSSERYRPARI
Trigger: TATTCTGGCTGGTCTGTATCTTTCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR CCA 90 bp AAAGGTCCATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAAGTGGGGAGGAAGCTCCTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: KGPFQWLNQPTYLRG*IMWRCEVGRKLLCH
Trigger: ATGGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCACACTGGCTCTCGCTCTTATTACGAA +
Preference number: 1 (lower is better)
Translates to: PSLCPVLSLGSQKGY*SCRPHHTGSRSYYE
Trigger: TTCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp TGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATC +
Preference number: 1 (lower is better)
Translates to: WLWSLVTIVSRCSWS*LYLACSFCRLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp GATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATaGTCACCCATAGTGATTTCTGGATGGAGGCCATCCAATCCCAAT +
Preference number: 1 (lower is better)
Translates to: DPSRLCTLAKQLRQV*SPIVISGWRPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp ATCCATCAAAGTTCTATCAGATGCAGATCTGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCATTTGCTCTGCGTCTTCCTATCCCCC +
Preference number: 1 (lower is better)
Translates to: IHQSSIRCRSVCLFT*RDSGAHLLCVFLSP
Trigger: GGGGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATAGAACTTTGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp TCTCTCCTGAAAAACTCTGTGGACACACCTAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATGCTGGTCCTAAAACTCATCTCCAAG +
Preference number: 1 (lower is better)
Translates to: SLLKNSVDTPREVTV*PPALVMLVLKLISK
Trigger: CTTGGAGATGAGTTTTAGGACCAGCATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCTAGGTGTGTCCACAGAGTTTTTCAGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CCTAGTGCAAAATGCGTGGCTGCCTCTTTCATAAGCCAAAGTACTTaGTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAG +
Preference number: 1 (lower is better)
Translates to: PSAKCVAASFISQST*YTEQHHTLLSKHCK
Trigger: CTTACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp ATCTTTCCCAACAAATATACCAGAAACTATGTGTGCTGTTGCAAATaGGGACGGCCCAAGAGTCTGGAGTTTTGTTCCCTGCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: IFPNKYTRNYVCCCK*GRPKSLEFCSLLPC
Trigger: GCAGGGCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTCCCCATTTGCAACAGCACACATAGTTTCTGGTATATTTGTTGGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp GGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGC +
Preference number: 1 (lower is better)
Translates to: GVLRLSGFPLKGPFQ*LNQPTYLRGWIMWR
Trigger: GCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp TTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCC +
Preference number: 1 (lower is better)
Translates to: FRLSERLLVMPSSSH*LSLLLRNNSRAFIP
Trigger: GGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp CGAGGGTCCAGTTCATGGTCCTTGGATCCAGTCACTAATTCCGGATaGATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAA +
Preference number: 1 (lower is better)
Translates to: RGSSSWSLDPVTNSG*IRTCSIIGLTTSSK
Trigger: TTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAATTAGTGACTGGATCCAAGGACCATGAACTGGACCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp TGGTATCTGAGTGCTTGTTCTGCAGTTGTTCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCT +
Preference number: 1 (lower is better)
Translates to: WYLSACSAVVPNRAR*PPQEPTAACSRTPS
Trigger: AGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 90 bp TATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTaGGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCC +
Preference number: 1 (lower is better)
Translates to: YKSKISNSNTWVILF*ASYLLSAACSCPLA
Trigger: GGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp CAGGCTATGTCCTCCTGGAAGGGACAAAACCAGACTTACCTGCAATaGAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTG +
Preference number: 1 (lower is better)
Translates to: QAMSSWKGQNQTYLQ*NKLPGLIESQPSYL
Trigger: CAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp GAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAAACAGGCTTCTGTTTACACAGAACT +
Preference number: 1 (lower is better)
Translates to: EEETRAFPKGVWSPQ*QLQISETGFCLHRT
Trigger: AGTTCTGTGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGCTCTCGCTCTTATTACGAAATAACT +
Preference number: 1 (lower is better)
Translates to: LCPVLSLGSQKGYWS*RPHHTGSRSYYEIT
Trigger: AGTTATTTCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 90 bp GAGTTTCTAATCTCTTCCACCTTCGAGGGTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCGGATGAATTCGCACATGCTCCATCA +
Preference number: 1 (lower is better)
Translates to: EFLISSTFEGPVHGP*IQSLIPDEFAHAPS
Trigger: TGATGGAGCATGTGCGAATTCATCCGGAATTAGTGACTGGATCCAAGGACCATGAACTGGACCCTCGAAGGTGGAAGAGATTAGAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp TATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATaGCAGCTTAGTGTTACTATGAAGGTGGGTTTGGTCAGGTGTGGT +
Preference number: 1 (lower is better)
Translates to: YLCHHCRCQCSGKGK*QLSVTMKVGLVRCG
Trigger: ACCACACCTGACCAAACCCACCTTCATAGTAACACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR TCA 90 bp TTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACACAGAACTTTCTAGGAAGCTTATCA +
Preference number: 1 (lower is better)
Translates to: FPKGCVVSTVPAPDF*NRLLFTQNFLGSLS
Trigger: TGATAAGCTTCCTAGAAAGTTCTGTGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGGCACTGTGGAGACCACACACCCTTTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp TGTCACCTTTCCATCCTTAGAACTACCCACTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAGGTTTATCATGTCCAAAACCAAACC +
Preference number: 1 (lower is better)
Translates to: CHLSILRTTHCSMIK*PVDSWQVYHVQNQT
Trigger: GGTTTGGTTTTGGACATGATAAACCTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAGTTCTAAGGATGGAAAGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp GTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTCTAGGGATAATAAAAGAG +
Preference number: 1 (lower is better)
Translates to: VESLVAWLSTPRRLL*GQRRQCPSLGIIKE
Trigger: CTCTTTTATTATCCCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
3UTR TCA 90 bp TATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTaGGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTGAAA +
Preference number: 1 (lower is better)
Translates to: YKSKISNSNTWVILF*ASYLLSAACSCPLK
Trigger: TTTCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR TCA 90 bp ACAAAACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCTGAACTTCGGGAAAGCAGAAAGTGG +
Preference number: 1 (lower is better)
Translates to: TKPDLPAMQQTTWSN*EPTQLSELRESRKW
Trigger: CCACTTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACA +
Preference number: 1 (lower is better)
Translates to: HELALRPWKQESFET*IHTSCSVPTICKLT
Trigger: TGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR GCA 90 bp AGCCTTGTCAACGGCTTTTTGAAAATCCATCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCAT +
Preference number: 1 (lower is better)
Translates to: SLVNGFLKIHQSSIR*RSVCLFTCRDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATAGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp AGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAG +
Preference number: 1 (lower is better)
Translates to: RFGETQNSHLHMRLL*DPERFWHTRSQHHE
Trigger: CTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp AGTAATACTGTCACCTTTCCATCCTTAGAACTACCCACTGCAGCATaGTCAAGTGACCTGTTGACTCTTGGCAGGTTTATCATGTCCAAA +
Preference number: 1 (lower is better)
Translates to: SNTVTFPSLELPTAA*SSDLLTLGRFIMSK
Trigger: TTTGGACATGATAAACCTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAGTTCTAAGGATGGAAAGGTGACAGTATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp AATAGCCATCTTCATATGAGGCTTCTGTGGGATCCAGAGAGATTTTaGCACACTCGATCACAACATCATGAGTTTCTAATCTCTTCCACC +
Preference number: 1 (lower is better)
Translates to: NSHLHMRLLWDPERF*HTRSQHHEFLISST
Trigger: GGTGGAAGAGATTAGAAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAGCCTCATATGAAGATGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp ACCCATAGTGATTTCTGGATGGAGGCCATCCAATCCCAATATTTATaGATACCAAGCTGCTTAATTGGTTTCAAGGTAGACTCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: THSDFWMEAIQSQYL*IPSCLIGFKVDSAL
Trigger: AAGGGCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGTATTCATAAATATTGGGATTGGATGGCCTCCATCCAGAAATCACTATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 90 bp GGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACAC +
Preference number: 1 (lower is better)
Translates to: GFLSYCNENAKRRRS*KGTFHKGDERVRTH
Trigger: GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR TCA 90 bp TCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTaGCCATCATTCCTTAGCTGTGTTCATGATGAGTCTCATTGTAGT +
Preference number: 1 (lower is better)
Translates to: SHLLFCANNMQVNTD*PSFLSCVHDESHCS
Trigger: ACTACAATGAGACTCATCATGAACACAGCTAAGGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 90 bp ATGTCCAAAACCAAACCAAACCTAACTACTGACTCTGGAGTTCTTTaGAACATGAAAGCCTACATTTTTAGGTTGGGCACCTTCAACATG +
Preference number: 1 (lower is better)
Translates to: MSKTKPNLTTDSGVL*NMKAYIFRLGTFNM
Trigger: CATGTTGAAGGTGCCCAACCTAAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGTTTGGTTTTGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 90 bp CTTCTTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATaGATCCAATGGTACTGCCATCCTGGAACAAATACTATTGGATAT +
Preference number: 1 (lower is better)
Translates to: LLGRHKNQFAWCCSR*IQWYCHPGTNTIGY
Trigger: ATATCCAATAGTATTTGTTCCAGGATGGCAGTACCATTGGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR CCA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATaGCCAGTGTTCAGCTTAAATTTAGCTTTTTCATCTAGAAAAAGG +
Preference number: 1 (lower is better)
Translates to: SSGKGMLSHPRGLYP*PVFSLNLAFSSRKR
Trigger: CCTTTTTCTAGATGAAAAAGCTAAATTTAAGCTGAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR TCA 90 bp GAACTTTCTAGGAAGCTTATCAGAACTGCCAAAAGAATGCAAGTATaGATAAACCGTTGTTCTTCTAGACCTGCTGCTTTAGATGCTGAA +
Preference number: 1 (lower is better)
Translates to: ELSRKLIRTAKRMQV*INRCSSRPAALDAE
Trigger: TTCAGCATCTAAAGCAGCAGGTCTAGAAGAACAACGGTTTATTCATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTCCTAGAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 90 bp TTACGCAGAACTTTTGTTTGCTCTTCGGTTCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGTAGAAATTCACATTGGCTTGTCACA +
Preference number: 1 (lower is better)
Translates to: LRRTFVCSSVLSFFK*YALLFGRNSHWLVT
Trigger: TGTGACAAGCCAATGTGAATTTCTACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 2 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFATPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAG +
Preference number: 2 (lower is better)
Translates to: LLPRALLGLGVLVSP*WPDASSLCPTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: RAAALITLRRSRLFRRACGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCATTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: RAAALITLRRSRLFRRACCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RAAALITLRRSRLFRRACFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQARNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASITLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 2 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 2 (lower is better)
Translates to: RAAALITLRRSRLFRRACHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASISLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFALLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFASFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCAGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 2 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GETGEGHLGSGESWLPHPATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFARRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTGAAAGAT +
Preference number: 2 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLLLSAA*SCPLKD
Trigger: ATCTTTCAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 2 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQADGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 2 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 2 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp CTCGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: LGSTWGSLVGIHSQP*PAFSRTLFRLLCHY
Trigger: GTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp AGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCC +
Preference number: 2 (lower is better)
Translates to: RSMGVKACFGVSGPS*SREECKGSGFTLAP
Trigger: GGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTCCAGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: KSNWSRRVRISSEGGEPPGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...TGGAGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGAGAGTCAAAGCCTCCTCGAGGAACCACAGGCTCTGCCTCTGCTGTGGTGATCCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 2 (lower is better)
Translates to: GESKPPRGTTGSASAVVIHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...GATCACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCATTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: GETGEGHLGSGESWLPHPFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 2 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: LGSEPTVVGMLADASPIVRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp GGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: GCPLPKPTLVGGGILQGLRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp TTCATGGCAGCATTATGTTCCTCCAGAGCTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTGCCTCTTA +
Preference number: 2 (lower is better)
Translates to: FMAALCSSRAAALIT*RRSRLFRRACCCLL
Trigger: TAAGAGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: GPALWCGGFSGVESSLLLPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASISPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGAGGAGAGGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 2 (lower is better)
Translates to: VKCARSHPNDRVGLEEERGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: QACPGRSVKAQGSRWRPEVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
3UTR CAA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCA +
Preference number: 2 (lower is better)
Translates to: GLGVLVSPLWPDASS*CPTMESEHPSLQQS
Trigger: TGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGTCTCGTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: RTGGCRVGLPLRTWETVSWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...CGAGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVETSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 2 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: LGSEPTVVGMLADASPIVPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: STPKSLPSSVFRLSERLLLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: PGGVKCARSHPNDRVGLERGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 2 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 2 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp GCATGTACCCTGGAGAGTGAAGGTGCAGCAGATAGGTATACTGATTaGAGTCACTCCACACCAGGCAGCTTCCTTCTCCAGGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ACTLESEGAADRYTD*SHSTPGSFLLQVGQ
Trigger: CTGCCCCACCTGGAGAAGGAAGCTGCCTGGTGTGGAGTGACTCAAATCAGTATACCTATCTGCTGCACCTTCACTCTCCAGGGTACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 2 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: LSAVSMGNSESEVAALAYPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 2 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 2 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 2 (lower is better)
Translates to: SKSPGQANKPHGTRVTAACSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: PPQKDDHTGEAARFQSPLKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp TCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: SPLWPDASSLCPTMESEHTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 2 (lower is better)
Translates to: SAIMFLQSSSFVCNSWLWLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...CCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 2 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: STPKSLPSSVFRLSERLLPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 2 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATGAAAGTTACCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHESYLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGGTAACTTTC...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR CAA 90 bp CTATGTGTGCTGTTGCAAATGGGGACGGCCCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTTTTACCCAGTAATGTGCGGCATGGT +
Preference number: 2 (lower is better)
Translates to: LCVLLQMGTAQESGV*FPAALLLPSNVRHG
Trigger: ACCATGCCGCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTCCCCATTTGCAACAGCACACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGAGAGTCAAAGCCTCCTCGAGGAACCACAGGCTCTGCCTCTGCTGTGGTGATCGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 2 (lower is better)
Translates to: GESKPPRGTTGSASAVVIETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GATCACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASITYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR TCA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: LQRVACGGSVISRVDGELPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp GTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGAGGAGAGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 2 (lower is better)
Translates to: VKCARSHPNDRVGLEEERMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 2 (lower is better)
Translates to: GILQGLGVKILVSKEVWHFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCCTGCAGCTGTCCTCTaGAAGATACAGACCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNPAAVL*KIQTSQ
Trigger: CTGGCTGGTCTGTATCTTTCAGAGGACAGCTGCAGG...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR-3UTR GCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 2 (lower is better)
Translates to: GPALWCGGFSGVESSLLLSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVERCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SPLWPDASSLCPTMESEHHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 2 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCATTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: GETGEGHLGSGESWLPHPFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 2 (lower is better)
Translates to: GKKRQELSQRVCGLHSASAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: REHVGQPSGYTQPAFASIPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 2 (lower is better)
Translates to: SKSPGQANKPHGTRVTAATHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SAIMFLQSSSFVCNSWLWYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 2 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 2 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 2 (lower is better)
Translates to: FLSLIPALCGLQLSSCLESRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp GGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAAGTCTTaGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATG +
Preference number: 2 (lower is better)
Translates to: GPSRFRGILASTPKS*PSSVFRLSERLLVM
Trigger: CATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR TCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 2 (lower is better)
Translates to: LAVELGYHSVTLLLELIVMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCCTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 2 (lower is better)
Translates to: LQLFQIELVDLPKNQQLPTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 2 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: GKKRQELSQRVCGLHSASKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 2 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: LSAVSMGNSESEVAALAYKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR GCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCAAGTGAGTCACTGTaGCTGGGCAGAGGGATAGCA +
Preference number: 2 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLASESL*LGRGIA
Trigger: TGCTATCCCTCTGCCCAGGCACAGTGACTCACTTGC...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647078.1
3UTR-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: FLSLIPALCGLQLSSCLEFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTGCTGTATCAGTCTGTCCAGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 2 (lower is better)
Translates to: TCSAPCCARLLPAVSVCPGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...TGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGACCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 2 (lower is better)
Translates to: CPLPKPTLVGGGILQGLGPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...TCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp AAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: KPTLVGGGILQGLGVKILIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...CAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: CLNRFSAGIARVTESLTVGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: SCPKDLRPISTHELALRPCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000644255.1
3UTR-3UTR TCA 90 bp TCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: SPLWPDASSLCPTMESEHCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 2 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 2 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: SPLWPDASSLCPTMESEHYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: STPKSLPSSVFRLSERLLFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTGGTGCTGTAGCAGATaGATCCAATGGTACTGCCAT +
Preference number: 2 (lower is better)
Translates to: LSAVSMGNSESEVAALAYWCCSR*IQWYCH
Trigger: ATGGCAGTACCATTGGATTCATCTGCTACAGCACCA...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTGCAGGAGGATTGCATaGGTCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTACRRIA*VWEVKA
Trigger: AGCCTTGACCTCCCAGACTCATGCAATCCTCCTGCA...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR GCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: LAVELGYHSVTLLLELIVKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 2 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: GNSESEVAALAYLTTSAEKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 2 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 2 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 2 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 2 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAACCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: PTLVGGGILQGLGVKILVRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 2 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGGTAATCCCAGGATTTTaGGAGGCCCAGGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: CAIIADANAVGRANDSLVVIPGF*EAQVGG
Trigger: TCCTCCTACCTGGGCCTCCCAAAATCCTGGGATTAC...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 2 (lower is better)
Translates to: SCPKDLRPISTHELALRPETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAISHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVETYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: LQRVACGGSVISRVDGELVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: GNSESEVAALAYLTTSAEVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 2 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
3UTR-3UTR TCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 2 (lower is better)
Translates to: STPKSLPSSVFRLSERLLPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 2 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR GCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCTGATGCAGGAGGATTaGATGAGTCTGGGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: CAIIADANAVGRANDSLVLMQED*MSLGGQ
Trigger: TTGACCTCCCAGACTCATGCAATCCTCCTGCATCAG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 2 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: YQLPACARLSSWDHALPQETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGCACACTAGTTGACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: GTLVDTILVVVQLSAVSMRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGTCAACTAGTGTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR-3UTR CCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 2 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 2 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTGTAATCCCAGGATTTTaGGAGGCCCAGGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAVIPGF*EAQVGG
Trigger: TCCTCCTACCTGGGCCTCCCAAAATCCTGGGATTAC...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR CAA 90 bp AGTGAGGCAACCCTAATGGCCTGGGAAATGATGGTCACATACACTTaGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SEATLMAWEMMVTYT*QKLFGPSEPFCCSV
Trigger: GACACTGCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCATCATTTCCCAGGCCATTAGGGTTGCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 2 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 2 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR TCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 2 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: KPTLVGGGILQGLGVKILEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...CAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCTGGTGCTGTAGCAGATaGATCCAATGGTACTGCCAT +
Preference number: 2 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSWCCSR*IQWYCH
Trigger: ATGGCAGTACCATTGGATTCATCTGCTACAGCACCA...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: SCPKDLRPISTHELALRPESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 2 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCTCGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 2 (lower is better)
Translates to: PLRTWETVSVKGRVKASSKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CGAGGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCACCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: CLNRFSAGIARVTESLTVQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 2 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 2 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 2 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: PTLVGGGILQGLGVKILVKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 2 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GYHSVTLLLELIVSS*FFLQTNLPHLDVLL
Trigger: GAGAAGGACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: LDCSAITNMESVMTSAPWANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 2 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGGGGTTCCCAGAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 2 (lower is better)
Translates to: WGSQRSSFSTCSCTKDFTMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...AGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTCTGGGAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: LDCSAITNMESVMTSAPWWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 2 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 2 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 2 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR-3UTR GCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: PHLTIQYQLPACARLSSWPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGACCACAAACCATAGATaGGCTCCAAAGAGTAGCCTG +
Preference number: 2 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLETTNHR*APKSSL
Trigger: CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR-3UTR CCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 2 (lower is better)
Translates to: LQRVACGGSVISRVDGELDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp GGCACACTAGTTGACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: GTLVDTILVVVQLSAVSMHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGTCAACTAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR-3UTR CCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 2 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 2 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 2 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 2 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 2 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: LDCSAITNMESVMTSAPWTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 2 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 2 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 2 (lower is better)
Translates to: GILQGLGVKILVSKEVWHMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp CCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAAGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: PDASSLCPTMESEHPSLQESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 2 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMENLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: HLTIQYQLPACARLSSWDWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 2 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 2 (lower is better)
Translates to: GNSESEVAALAYLTTSAEKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR GCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTASPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 2 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 2 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 2 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLARVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 2 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 2 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTaGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCA +
Preference number: 2 (lower is better)
Translates to: FPHMNLHSDPGNRKA*KRAFTPPVLCQQYA
Trigger: TGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR CAA 90 bp ACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAGGTaGGGCACCTTCAACATGACTCCAGGTCTCATTCTCCCAACCGTA +
Preference number: 2 (lower is better)
Translates to: TDSGVLCNMKAYIFR*GTFNMTPGLILPTV
Trigger: TACGGTTGGGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 2 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 2 (lower is better)
Translates to: GGILQGLGVKILVSKEVWFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...CCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 2 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: CLNRFSAGIARVTESLTVIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: LDCSAITNMESVMTSAPWNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 2 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 2 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: LDCSAITNMESVMTSAPWFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: CLNRFSAGIARVTESLTVFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 2 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 2 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 2 (lower is better)
Translates to: CHISFGSQSSSPLASPLFSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 2 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 2 (lower is better)
Translates to: EEFLFHLQLYQRLYCKGVESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 2 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLAHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 2 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR TCA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 2 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 2 (lower is better)
Translates to: SHLLVLSARKGESHYAELGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 2 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 2 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAAGTACATCAGCAGTaGCAAAGGAATGCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEKVHQQ*QRNAKS
Trigger: TGACTTAGCATTCCTTTGCCACTGCTGATGTACTTT...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR-3UTR CCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 2 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 2 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CAA 90 bp TTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTTCCTTCTTCAAGTGGTATGCTCTAC +
Preference number: 2 (lower is better)
Translates to: LVLSARKGESHYAEL*FALRFFPSSSGMLY
Trigger: GTAGAGCATACCACTTGAAGAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp AGATACACAAACATCTTCAGACTGGATACATTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCATGTACCCTGGAGAGTGAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: RYTNIFRLDTFFQYL*RVGFKACTLESEGA
Trigger: TGCACCTTCACTCTCCAGGGTACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGAAGATGTTTGTGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp CGACGTCAGTGTCCATCTCTAGGGATAATAAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAA +
Preference number: 2 (lower is better)
Translates to: RRQCPSLGIIKELPF*ADTKINLHGAVADE
Trigger: TTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTTTATTATCCCTAGAGATGGACACTGACGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGCTTAAAAGTGACTCCTaGAATGAGCAGTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLLKSDS*NEQCEI
Trigger: AATTTCACACTGCTCATTTCAGGAGTCACTTTTAAG...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 2 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 2 (lower is better)
Translates to: GILQGLGVKILVSKEVWHKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAAATGGTACTGCCATCCTaGAACAAATACTATTGGATA +
Preference number: 2 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKMVLPS*NKYYWI
Trigger: TATCCAATAGTATTTGTTCCAGGATGGCAGTACCAT...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR CAA 90 bp TTTGCTCTTCGGTTCTTTCCTTCTTCAAGTGGTATGCTCTACTATTaGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: FALRFFPSSSGMLYY*VEIHIGLSQHTSVL
Trigger: CAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAGAACCGAAGAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp TGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTTCTTCAAGTGGTATGCTCTACTATT +
Preference number: 2 (lower is better)
Translates to: CFQREKVSLITQNFC*LFGSFLLQVVCSTI
Trigger: AATAGTAGAGCATACCACTTGAAGAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp AACAGATACACAAACATCTTCAGACTGGATACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAAGCATGTACCCTGGAGAGTGAAGGT +
Preference number: 2 (lower is better)
Translates to: NRYTNIFRLDTFFQY*LRVGFKACTLESEG
Trigger: ACCTTCACTCTCCAGGGTACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGAAGATGTTTGTGTATCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 2 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSALILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGCTTAAAAGTGACTCCTaGAATGAGCAGTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: TQKGDEVARVHSIKAMKELKSDS*NEQCEI
Trigger: AATTTCACACTGCTCATTTCAGGAGTCACTTTTAAG...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 2 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 2 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 2 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 2 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 2 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 2 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 90 bp TCATATTTATGGCATCTGATGTGGATTGTTGACATGCTTTTAGGATaGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCTT +
Preference number: 2 (lower is better)
Translates to: SYLWHLMWIVDMLLG*RRESLDLLTRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCATGTCAACAATCCACATCAGATGCCATAAATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 2 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 2 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 2 (lower is better)
Translates to: MLLGLRRESLDLLTRADFLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACAAGAGTTACCCTTCTTaGCAGACACAAAAATCAATT +
Preference number: 2 (lower is better)
Translates to: SRRCCFPDCGIIGSMVINKSYPS*QTQKSI
Trigger: AATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTT...GTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp CTCCACCACCTCTGCTTCCACTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGC +
Preference number: 3 (lower is better)
Translates to: LHHLCFHYCPGR*WAWGSWSHRCG
Trigger: GCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAGTGGAAGCAGAGGTGGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp GCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: AGGGRHPISPRS*PGLRSAQTLLQ
Trigger: CTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp CTGGGGGAACAACTCTCCAAGAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: LGEQLSKSIRRR*AAPHLTKVLAG
Trigger: CCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACTCTTGGAGAGTTGTTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp GGACACCCAGGCCGCATGGATGAGCTGAGGACCCTGTaGAGACACGTCCATGGAGCTTCTAGCACAGGCCTC +
Preference number: 3 (lower is better)
Translates to: GHPGRMDELRTL*RHVHGASSTGL
Trigger: GAGGCCTGTGCTAGAAGCTCCATGGACGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp TGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTaGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: CPGRSVKAQGSR*RPENWRLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp CTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: LPPTAEWACPLV*GFLWGRKLAAA
Trigger: AGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp GTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTG +
Preference number: 3 (lower is better)
Translates to: VVSHRLLNGPAL*CGGFSGVESSL
Trigger: CAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp CGCTTCTCCCATAGTCGTCTCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: RFSHSRLPPTAE*ACPLVWGFLWG
Trigger: ACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 3 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp GCAGGACGGCATGGAAGAGACAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCGGACAGGCAAACAAGC +
Preference number: 3 (lower is better)
Translates to: AGRHGRDRNTLP*AHRRVPDRQTS
Trigger: GCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp TCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATaGAAGAGACAGGAACACGCTCCCCTGGGCACATCG +
Preference number: 3 (lower is better)
Translates to: SLRRADKDCRTA*KRQEHAPLGTS
Trigger: CGATGTGCCCAGGGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp GCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTGTGCCCTACCATGGAA +
Preference number: 3 (lower is better)
Translates to: ALLGLGVLVSPL*PDASSLCPTME
Trigger: TTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 3 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp CAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAGGCTGGGAATCAGTCA +
Preference number: 3 (lower is better)
Translates to: QYQLPACARLSS*DHALPQAGNQS
Trigger: TGACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp CACATCGAAGAGTCCCGGACAGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGCAGCCTAGGGGCCAGT +
Preference number: 3 (lower is better)
Translates to: HIEESRTGKQAT*DKGHSSSLGAS
Trigger: ACTGGCCCCTAGGCTGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 3 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 3 (lower is better)
Translates to: YQLPACARLSSWDHALPQDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: ALRTGGCRVGLPLRTWETHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...AGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp TCATGGCAGCATTATGTTCCTCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGG +
Preference number: 3 (lower is better)
Translates to: SWQHYVPPELLL*SPCGGAACSGG
Trigger: CCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp ACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTaGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: TGGCRVGLPLRT*ETVSVKGRVKA
Trigger: GGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCACATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: GETGEGHLGSGESWLPHPHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR GCA 72 bp TACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGACAGGAACACGCTCCC +
Preference number: 3 (lower is better)
Translates to: YSYSSLRRADKD*RTAWKRQEHAP
Trigger: GGGAGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp TCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SSRSCCSCLIWL*SLVTIVSRCSW
Trigger: CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 3 (lower is better)
Translates to: YQLPACARLSSWDHALPQLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 3 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 3 (lower is better)
Translates to: GPALWCGGFSGVESSLLLLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 3 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 3 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR TCA 72 bp ATAAAGCTGAGTAAAAGGACACCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAGACACGTCCATGGAGC +
Preference number: 3 (lower is better)
Translates to: IKLSKRTPRPHG*AEDPVQTRPWS
Trigger: GCTCCATGGACGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGGTGTCCTTTTACTCAGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AGCCAAGTTCACTGGCTCCTTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGACCACAGTTCTTAGGC +
Preference number: 3 (lower is better)
Translates to: SQVHWLLPTKSP*LSWNTRPQFLG
Trigger: GCCTAAGAACTGTGGTCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGGAAGGAGCCAGTGAACTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp CGGCCCAAGAGTCTGGAGTTTTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGCGGCATGGTGGGTGAA +
Preference number: 3 (lower is better)
Translates to: RPKSLEFCSLLP*FYPVMCGMVGE
Trigger: TTCACCCACCATGCCGCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AACTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGCACTTCCATTGGGGAG +
Preference number: 3 (lower is better)
Translates to: NLFSSLLCASAP*CISLSSTSIGE
Trigger: CTCCCCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp TTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGTATCAGTCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: LLGKGNLFSSLL*ASAPCCISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp CAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: QTPGLSFSEPHT*SLRPAAVLLPG
Trigger: TCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp TCTGCCATCATTAACTCGTTTCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCTTCCAGGCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SAIINSFHDQKP*AQVLGSSRQAS
Trigger: GGAAGCCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATGAAACGAGTTAATGATGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp GAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCG +
Preference number: 3 (lower is better)
Translates to: ESLQSGSSRQTC*VKATCSAPCCA
Trigger: CGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: YQLPACARLSSWDHALPQAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: REHVGQPSGYTQPAFASIAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 3 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 3 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp GGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 3 (lower is better)
Translates to: GPGGLGLTVVARCLFIVPLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...GGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAGCTGATGCAGGAGGATaGCATGAGTCTGGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKADAGG*HESGRS
Trigger: TGACCTCCCAGACTCATGCAATCCTCCTGCATCAGC...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR GCA 72 bp TGCCACAGGCTGGGAATCAGTCACACCCAGAAAGCCTaGCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTG +
Preference number: 3 (lower is better)
Translates to: CHRLGISHTQKA*LNRFSAGIARV
Trigger: CACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGGTGTGACTGATTCCCAGCCTGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp CAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCTGCTGTATCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: QTCWVKATCSAP*CARLLPAVSVC
Trigger: ACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp GAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGT +
Preference number: 3 (lower is better)
Translates to: EESLQSGSSRQT*WVKATCSAPCC
Trigger: ACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp GGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTaGCATTCCCTGTCTCCCGCAGGGCTTTCATCAGCA +
Preference number: 3 (lower is better)
Translates to: GLGVKILVSKEV*HSLSPAGLSSA
Trigger: TGCTGATGAAAGCCCTGCGGGAGACAGGGAATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp AGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGGAGTGAAGATACTGGT +
Preference number: 3 (lower is better)
Translates to: RLPASKAHSRRR*NFTRTGSEDTG
Trigger: ACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 3 (lower is better)
Translates to: PHLTIQYQLPACARLSSWIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: REHVGQPSGYTQPAFASIFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 3 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 3 (lower is better)
Translates to: SKSPGQANKPHGTRVTAASRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 3 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 3 (lower is better)
Translates to: SKSPGQANKPHGTRVTAADRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 3 (lower is better)
Translates to: QACPGRSVKAQGSRWRPEQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: VLQLFQIELVDLPKNQQLSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...CAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR TCA 72 bp CATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAGGAAAGCGGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: HSYSVCQHKGWW*HRLNDEESGLR
Trigger: TCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACCAGCCCTTATGCTGACACACAGAATAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp ACTGGTTGTGCAGTAAAAGCAACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAGGAGAGCCTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: TGCAVKATGLGG*GSHLKEESLQS
Trigger: ACTTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCACAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp CTGATCTTTCATGGCAGCATTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTT +
Preference number: 3 (lower is better)
Translates to: LIFHGSIMFLQS*CFDHLAEEPPV
Trigger: AACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGAAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp CTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCTGAAAGATACAGACCA +
Preference number: 3 (lower is better)
Translates to: LGYPFLSLIPAL*GLQLSSERYRP
Trigger: TGGTCTGTATCTTTCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 3 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp AAGGAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTGCTGGGTAAAGGCAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 3 (lower is better)
Translates to: KEESLQSGSSRQTCWVKAAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: AVELGYHSVTLLLELIVSRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCAGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 3 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTGCCAAAGCAGAGTTTaGGAACCACCCAGGGGTCGG +
Preference number: 3 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTACQSRV*EPPRGR
Trigger: CCGACCCCTGGGTGGTTCCAAAACTCTGCTTTGGCA...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTGTCAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: GQVYGSKGLLWCVRPKLVKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR CAA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: PHLTIQYQLPACARLSSWEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: LGSEPTVVGMLADASPIVLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 3 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: SKSPGQANKPHGTRVTAATQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 3 (lower is better)
Translates to: LGLTVVARCLFIVPYHGISSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 3 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR TCA 72 bp TTGTTGAGTTTGGATTCTCTGCCACTGCCAATTTTCTaGCTAGTGTCATCTCTCGGGAGCACGTGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: LLSLDSLPLPIF*LVSSLGSTWGS
Trigger: GCTGCCCCACGTGCTCCCGAGAGATGACACTAGTCAGAAAATTGGCAGTGGCAGAGAATCCAAACTCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp TGGAGAGTGAAGGTGCAGCAGATAGGTATACTGATTTaGGTCACTCCACACCAGGCAGCTTCCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: WRVKVQQIGILI*VTPHQAASFSR
Trigger: CCTGGAGAAGGAAGCTGCCTGGTGTGGAGTGACTCAAATCAGTATACCTATCTGCTGCACCTTCACTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp CCGACTCACTGTTTGAGAGCTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGACACACCTTGTTGTTGG +
Preference number: 3 (lower is better)
Translates to: PTHCLRAFGKPD*AAAQCDTPCCW
Trigger: CCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp CTCTGGTTAGTGTCAGGTGGGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTGAGACAGGTATGCTCA +
Preference number: 3 (lower is better)
Translates to: LWLVSGGDPSRL*TLAKQLRQVCS
Trigger: TGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACACTAACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp TCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SSVLSAAPQSCS*SPPASSVIPGS
Trigger: AGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp CCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTGTTTGAGAGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: PRTNSCLFKNSI*CWTDSLFESFW
Trigger: CCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp TTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAGCACCCGTCATTACAA +
Preference number: 3 (lower is better)
Translates to: LVSPLWPDASSL*PTMESEHPSLQ
Trigger: TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp GGTTCAGGGGAATCTTGGCTTCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTAC +
Preference number: 3 (lower is better)
Translates to: GSGESWLPHPSL*PVLSLGSQKGY
Trigger: GTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp GGGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTCCAGATTTCTGAAACA +
Preference number: 3 (lower is better)
Translates to: GEEETRAFPKGV*SPQCQLQISET
Trigger: TGTTTCAGAAATCTGGAGCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp TTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGGAAGCTCCTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: LNQPTYLRGWIM*RCEVGRKLLCH
Trigger: ATGGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: GKKRQELSQRVCGLHSASFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 3 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 3 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGACATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AAGGGTCAGCTTCACCAGAAAGCAGAGGAGAGAGCAGGCACACTAGTTGACACCTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 3 (lower is better)
Translates to: KGQLHQKAEERAGTLVDTCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GGTGTCAACTAGTGTGCCTGCTCTCTCCTCTGCTTTCTGGTGAAGCTGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR-3UTR CAA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 3 (lower is better)
Translates to: VELGYHSVTLLLELIVSSSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 3 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR CAA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGCTGATGCAGGAGGATaGCATGAGTCTGGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: ICAIIADANAVGRANDSLADAGG*HESGRS
Trigger: TGACCTCCCAGACTCATGCAATCCTCCTGCATCAGC...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR TCA 72 bp TCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATATTTAACAACATCAGC +
Preference number: 3 (lower is better)
Translates to: SVISRVDGELRV*GSCPGIFNNIS
Trigger: GCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp CTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAGAAGTCTGGCATTCCC +
Preference number: 3 (lower is better)
Translates to: LSSEVEFYKDWE*RYWSPKKSGIP
Trigger: GGGAATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp GCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTaGGCACCCGTCATTACAACAGTCAAGCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: ARCLFIVPYHGI*APVITTVKPFF
Trigger: GAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp CTTAGCTGTGTTCATGATGAGTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACACTGTCCGGGGTCGGGG +
Preference number: 3 (lower is better)
Translates to: LSCVHDESHCSP*YVAVQHCPGSG
Trigger: CCCCGACCCCGGACAGTGTTGGACAGCTACATATCATGGACTACAATGAGACTCATCATGAACACAGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp AGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATaGTCACCCATAGTGATTTCTGGATGGAGGCCATCC +
Preference number: 3 (lower is better)
Translates to: RLCTLAKQLRQV*SPIVISGWRPS
Trigger: GGATGGCCTCCATCCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTTGAGAGCTTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: RTNSCLFKNSIC*WTDSLFESFWE
Trigger: TTCCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR GCA 72 bp GTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGCTCTCGCTCTTATTAC +
Preference number: 3 (lower is better)
Translates to: VLSLGSQKGYWS*RPHHTGSRSYY
Trigger: GTAATAAGAGCGAGAGCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR CCA 72 bp ACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTaGCATGGAGATGGACGAGATAGACTTCCGCCACGT +
Preference number: 3 (lower is better)
Translates to: TFHKGDERVRTH*HGDGRDRLPPR
Trigger: ACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR CCA 72 bp TCAGAAAGGCTACTGGTCATGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGAAATAACTCTCGAGCC +
Preference number: 3 (lower is better)
Translates to: SERLLVMPSSSH*LSLLLRNNSRA
Trigger: GGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: HLTIQYQLPACARLSSWDLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: PHLTIQYQLPACARLSSWLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 3 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 3 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCAAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 3 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
3UTR-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAACATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAACATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCAGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 3 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp AGCTTATGCTTCCAAGATGGCTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATGGATAAACGAGTGGCG +
Preference number: 3 (lower is better)
Translates to: SLCFQDGCSLMT*PSNERMDKRVA
Trigger: CGCCACTCGTTTATCCATCCTCTCGTTACTGGGTCATGTCATAAGACTGCAGCCATCTTGGAAGCATAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR TCA 72 bp TTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTCTAGGGATA +
Preference number: 3 (lower is better)
Translates to: LVAWLSTPRRLL*GQRRQCPSLGI
Trigger: TATCCCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
3UTR GCA 72 bp GCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCTGTGCCAACAATATGC +
Preference number: 3 (lower is better)
Translates to: ALRPWKQESFET*IHTSCSVPTIC
Trigger: GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR GCA 72 bp ACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAAACAGGCTTCTGTTTA +
Preference number: 3 (lower is better)
Translates to: TRAFPKGVWSPQ*QLQISETGFCL
Trigger: TAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AGCCTTTGCCAGCATTCTCCCGGACTCTGTTTAGACTaGTCTGCCATTACTAACATGGAGAGTGTGATGACA +
Preference number: 3 (lower is better)
Translates to: SLCQHSPGLCLD*SAITNMESVMT
Trigger: TGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AAAAACTCTGTGGACACACCTAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATGCTGGTCCTAAAACTC +
Preference number: 3 (lower is better)
Translates to: KNSVDTPREVTV*PPALVMLVLKL
Trigger: GAGTTTTAGGACCAGCATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCTAGGTGTGTCCACAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp AAATGCGTGGCTGCCTCTTTCATAAGCCAAAGTACTTaGTACACAGAGCAGCACCATACCCTCCTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: KCVAASFISQST*YTEQHHTLLSK
Trigger: TTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATGAAAGAGGCAGCCACGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp GTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAGATGGACGAGATAGAC +
Preference number: 3 (lower is better)
Translates to: VARVHSIKAMKE*VHTGMEMDEID
Trigger: GTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR CCA 72 bp ATCTCTTCCACCTTCGAGGGTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCGGATGAATTCGCACAT +
Preference number: 3 (lower is better)
Translates to: ISSTFEGPVHGP*IQSLIPDEFAH
Trigger: ATGTGCGAATTCATCCGGAATTAGTGACTGGATCCAAGGACCATGAACTGGACCCTCGAAGGTGGAAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR CCA 72 bp CCAGGTGGCTCTTCTGATCCTCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCC +
Preference number: 3 (lower is better)
Translates to: PGGSSDPLSFRR*CCLCRHGLAES
Trigger: GGATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGAAGAGCCACCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: LPLRTWETVSVKGRVKASTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVETQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 3 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 3 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
3UTR-3UTR CAA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 3 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: SHLLVLSARKGESHYAELFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: CLNRFSAGIARVTESLTVKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: CLNRFSAGIARVTESLTVLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 3 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 3 (lower is better)
Translates to: CHISFGSQSSSPLASPLFIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 3 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 3 (lower is better)
Translates to: SHLLVLSARKGESHYAELPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 3 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 3 (lower is better)
Translates to: TQKGDEVARVHSIKAMKEHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 3 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 3 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR-3UTR CAA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 3 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR-3UTR CAA 90 bp CCAAAGGGTCAGCTTCACCAGAAAGCAGAGGAGAGAGCAGGCACACTAGTTGACAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAAT +
Preference number: 3 (lower is better)
Translates to: PKGQLHQKAEERAGTLVDKELPF*ADTKIN
Trigger: ATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTT...GTCAACTAGTGTGCCTGCTCTCTCCTCTGCTTTCTGGTGAAGCTGACCCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR TCA 72 bp GTCACCTTTCCATCCTTAGAACTACCCACTGCAGCATaGTCAAGTGACCTGTTGACTCTTGGCAGGTTTATC +
Preference number: 3 (lower is better)
Translates to: VTFPSLELPTAA*SSDLLTLGRFI
Trigger: GATAAACCTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAGTTCTAAGGATGGAAAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp GAGAGAGCTTATGCTTCCAAGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGAGGATGGATAAACGAG +
Preference number: 3 (lower is better)
Translates to: ERAYASKMAAVL*HDPVTRGWINE
Trigger: CTCGTTTATCCATCCTCTCGTTACTGGGTCATGTCATAAGACTGCAGCCATCTTGGAAGCATAAGCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR TCA 72 bp ACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATTTCCAGGAGAAGTTGG +
Preference number: 3 (lower is better)
Translates to: TCSCTKDFTVRV*QIRWDISRRSW
Trigger: CCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp AGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCTTTCTGCAGACTAACC +
Preference number: 3 (lower is better)
Translates to: SLVTIVSRCSWS*LYLACSFCRLT
Trigger: GGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp TCCACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATTTCCAGGAGAAGTTGG +
Preference number: 3 (lower is better)
Translates to: STSCTKDFTVRV*QIRWDISRRSW
Trigger: CCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
3UTR CCA 72 bp TCCTGGGTCGTAACAGTTCACCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATGTCACATAAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SWVVTVHLLRTV*TVSPTMSHKLW
Trigger: CCAAAGCTTATGTGACATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGGTGAACTGTTACGACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp CTCAGTCTTCCTGATGACAAAATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAGATGATCATACGGGGG +
Preference number: 3 (lower is better)
Translates to: LSLPDDKMMGCL*QCHLKKMIIRG
Trigger: CCCCCGTATGATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATTTTGTCATCAGGAAGACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
3UTR-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: SHLLVLSARKGESHYAELFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: CLNRFSAGIARVTESLTVFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: SHLLVLSARKGESHYAELAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 3 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 3 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp TGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTCCATATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: CPSLVTSTDLSWQHYVPPYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 3 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
3UTR-3UTR CAA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 3 (lower is better)
Translates to: CAIIADANAVGRANDSLVHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
3UTR-3UTR CAA 90 bp ACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTGACACAAAAATCAATTaGCATGGTGCTGTAGCAGAT +
Preference number: 3 (lower is better)
Translates to: TPYLWWFSYQPCRWGTQSDTKIN*HGAVAD
Trigger: ATCTGCTACAGCACCATGCAAATTGATTTTTGTGTC...ACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR TCA 72 bp GACTTACCTGCAATGCAACAAACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCTGAACTTCGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: DLPAMQQTTWSN*EPTQLSELRES
Trigger: GCTTTCCCGAAGTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp TCCATCCTTAGAACTACCCACTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAGGTTTATCATGTCCAA +
Preference number: 3 (lower is better)
Translates to: SILRTTHCSMIK*PVDSWQVYHVQ
Trigger: TTGGACATGATAAACCTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAGTTCTAAGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTAT +
Preference number: 3 (lower is better)
Translates to: RSWRSGHTTNHR*APKSSLWWFSY
Trigger: ATAACTGAACCACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 3 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: MLLGLRRESLDLLTRADFEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 3 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 3 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 3 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAGACACAAAAATCAATTaGCATGGTGCTGTAGCAGAT +
Preference number: 3 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPDTKIN*HGAVAD
Trigger: ATCTGCTACAGCACCATGCAAATTGATTTTTGTGTC...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642344.1
3UTR GCA 72 bp TTTATCTTTCCCAACAAATATACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGGCCCAAGAGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: FIFPNKYTRNYV*CCKWGRPKSLE
Trigger: CTCCAGACTCTTGGGCCGTCCCCATTTGCAACAGCACACATAGTTTCTGGTATATTTGTTGGGAAAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp AATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAGATAGGTATACTGATT +
Preference number: 3 (lower is better)
Translates to: NTCCGSVLKHVP*RVKVQQIGILI
Trigger: AATCAGTATACCTATCTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAAAACCGACCCGCAACAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp AGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTATCTCAGAGGATGGATA +
Preference number: 3 (lower is better)
Translates to: RLSGFPLKGPFQ*LNQPTYLRGWI
Trigger: TATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 3 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 3 (lower is better)
Translates to: TQKGDEVARVHSIKAMKEQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 3 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAAT +
Preference number: 3 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPKELPF*ADTKIN
Trigger: ATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTT...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642344.1
3UTR CCA 72 bp CTGAGACAGGTATGCTCACCCATAGTGATTTCTGGATaGAGGCCATCCAATCCCAATATTTATGAATACCAA +
Preference number: 3 (lower is better)
Translates to: LRQVCSPIVISG*RPSNPNIYEYQ
Trigger: TTGGTATTCATAAATATTGGGATTGGATGGCCTCCATCCAGAAATCACTATGGGTGAGCATACCTGTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp TTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTaGCTACATGAAACGCATACCCAGTTTTCTATTCTT +
Preference number: 3 (lower is better)
Translates to: FTLACHSTLQFC*LHETHTQFSIL
Trigger: AAGAATAGAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CCA 72 bp CTTCATATGAGGCTTCTGTGGGATCCAGAGAGATTTTaGCACACTCGATCACAACATCATGAGTTTCTAATC +
Preference number: 3 (lower is better)
Translates to: LHMRLLWDPERF*HTRSQHHEFLI
Trigger: GATTAGAAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAGCCTCATATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: SHLLVLSARKGESHYAELLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 3 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 3 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR-3UTR CAA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 3 (lower is better)
Translates to: GILQGLGVKILVSKEVWHFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644255.1
3UTR GCA 72 bp AAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTaGTGGCTACATGAAACGCATACCCAGTTTTCTATT +
Preference number: 3 (lower is better)
Translates to: KFTLACHSTLQF*WLHETHTQFSI
Trigger: AATAGAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR GCA 72 bp TCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAAGGCGATGAAAGAGTG +
Preference number: 3 (lower is better)
Translates to: SYCNENAKRRRS*KGTFHKGDERV
Trigger: CACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
3UTR-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: RLNLASYCTGSKDATIWGTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 3 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 3 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 3 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
3UTR TCA 72 bp GATTTCTGGATGGAGGCCATCCAATCCCAATATTTATaGATACCAAGCTGCTTAATTGGTTTCAAGGTAGAC +
Preference number: 3 (lower is better)
Translates to: DFWMEAIQSQYL*IPSCLIGFKVD
Trigger: GTCTACCTTGAAACCAATTAAGCAGCTTGGTATTCATAAATATTGGGATTGGATGGCCTCCATCCAGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp AGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATaGATCCAATGGTACTGCCATCCTGGAACAAATACT +
Preference number: 3 (lower is better)
Translates to: RHKNQFAWCCSR*IQWYCHPGTNT
Trigger: AGTATTTGTTCCAGGATGGCAGTACCATTGGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR CCA 72 bp AACACAAAAGCCTTTCCTGATGAAAGTTACCTTGCCTaGAGTTTGACATCCTCTAGATATTTCTTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: NTKAFPDESYLA*SLTSSRYFFCS
Trigger: GGAACAGAAGAAATATCTAGAGGATGTCAAACTCCAGGCAAGGTAACTTTCATCAGGAAAGGCTTTTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: MLLGLRRESLDLLTRADFLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp AGGAAGCTTATCAGAACTGCCAAAAGAATGCAAGTATaGATAAACCGTTGTTCTTCTAGACCTGCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: RKLIRTAKRMQV*INRCSSRPAAL
Trigger: TAAAGCAGCAGGTCTAGAAGAACAACGGTTTATTCATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp TATAGACTGTATAGCAGAGCCTTGTCAACGGCTTTTTaGAAATCCATCAAAGTTCTATCAGATGCAGATCTG +
Preference number: 3 (lower is better)
Translates to: YRLYSRALSTAF*KSIKVLSDADL
Trigger: CAGATCTGCATCTGATAGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAGGCTCTGCTATACAGTCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 3 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp ACTGTATTGGGTTTTAAGCTTTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCACTAATACTCCACATC +
Preference number: 3 (lower is better)
Translates to: TVLGFKLSFGQS*IKCVVSLILHI
Trigger: GATGTGGAGTATTAGTGACACCACACATTTAATTCAGCTTTGTCCAAAGGAAAGCTTAAAACCCAATACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR TCA 72 bp TCTTTGCTAATATCATGGATCCTTAAAAGTGACTCCTaGAATGAGCAGTGTGAAATTTTCCCAACCACATAC +
Preference number: 3 (lower is better)
Translates to: SLLISWILKSDS*NEQCEIFPTTY
Trigger: GTATGTGGTTGGGAAAATTTCACACTGCTCATTTCAGGAGTCACTTTTAAGGATCCATGATATTAGCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642854.1
3UTR-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 3 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AGALRTGGCRVGLPLRTWYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...CCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFASLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFATGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp CGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCATTGTGCCCTACCATG +
Preference number: 4 (lower is better)
Translates to: RALLGLGVLVSP*WPDASSLCPTM
Trigger: CATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCATTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGTCTCGGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RTGGCRVGLPLRTWETVSARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...CGAGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: AAALITLRRSRLFRRACCSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFARGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQASPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AGALRTGGCRVGLPLRTWTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASILLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGSEPTVVGMLADASPIVLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: QACPGRSVKAQGSRWRPEPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFARVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQASYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RAAALITLRRSRLFRRACSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFACPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGALRTGGCRVGLPLRTWYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGACCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGTCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LRTGGCRVGLPLRTWETVEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAARAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGAGGAGAGGCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: VKCARSHPNDRVGLEEERRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...CCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVERSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GPGGLGLTVVARCLFIVPTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...GGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTGCCTCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: CFDHLAEEPPVPEGMLLPLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...AGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: AAALITLRRSRLFRRACCPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGLGVLVSPLWPDASSLCLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...GCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLSLIPALCGLQLSSCLENGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRRAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645150.1
3UTR CAA 72 bp GCATTATGTTCCTCCAGAGCTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGC +
Preference number: 4 (lower is better)
Translates to: ALCSSRAAALIT*RRSRLFRRACC
Trigger: GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IIRGRLPASKAHSRRRWNATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...ATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GPGGLGLTVVARCLFIVPFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...GGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTGTCTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GQVYGSKGLLWCVRPKLVSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...GACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTGCACCTCCCCCGTCGTaGAAGGGCCAAGGCCGACGG +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIAPPPS*KGQGRR
Trigger: CCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGC...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGCACCTCCCCCGTCGTaGAAGGGCCAAGGCCGACGG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPAPPPS*KGQGRR
Trigger: CCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644097.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPYFSFQ*CQPGVF
Trigger: AAAGACACCAGGTTGACAGCACTGGAAACTGAAGTA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298552.9
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAGGCTCAGGGTTCACGCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAQGSRWRPENWRLPSGSKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCTCGCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PLRTWETVSVKGRVKASSLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...CGAGGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQALAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASITCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASITGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCACTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: LLPRALLGLGVLVSPLWPLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QACPGRSVKAQGSRWRPESSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: AGALRTGGCRVGLPLRTWPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...CCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GPGGLGLTVVARCLFIVPTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...GGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VLQLFQIELVDLPKNQQLYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...CAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGATACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: LVVEFLSVMLQLSDLAVEARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...CTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGGAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTGCTGGGTAAAGGCATGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KEESLQSGSSRQTCWVKAWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...TGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTCCATGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSNWSRRVRISSEGGEPPWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...TGGAGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: VELGYHSVTLLLELIVSSGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCTCGGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLRTWETVSVKGRVKASSACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...CGAGGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQVCYRF*RFFIGA
Trigger: GGCCCCAATGAAGAACCTTCAGAACCTGTAGCACAC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AAGGCTCAGGGTTCACGCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KAQGSRWRPENWRLPSGSCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AAGGCTCAGGGTTCACGCTGGCGCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: KAQGSRWRPENWRLPSGSVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp GGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: GCPLPKPTLVGGGILQGLGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAATGCCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QCHLKKMIIRGRLPASKAPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTGCCTCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: CFDHLAEEPPVPEGMLLPPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...AGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAERSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCATTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LGSEPTVVGMLADASPIVPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCACTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SATWPGFFRHHDDRRPKMSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQARGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ALRTGGCRVGLPLRTWETHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...AGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASICSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PQEPTAACSRTPSAAGPTACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...AGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGACCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: GLLQFYPQLRNHVPAVLQVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVRAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644097.1
ENST00000646625.1
3UTR CAA 72 bp AGCACTGCCGCAGGGCAGGTCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCCAAGCTTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STAAGQVYGSKG*LWCVRPKLVQG
Trigger: TCCCTGGACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGCGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTGCCTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CFDHLAEEPPVPEGMLLPIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...AGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: LPLRTWETVSVKGRVKASEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QSCSCSPPASSVIPGSGCFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...ACAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPGGLGLTVVARCLFIVPFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...GGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQACSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQALPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASILPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAGGTCAAGGCTGCAGTaGGCCATGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRRSRLQ*AMIVPL
Trigger: CAGTGGCACGATCATGGCTCACTGCAGCCTTGACCT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMERSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DRLPPRGLVSSGTMMTDGGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...GCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SSIRSSAIMFLQSSSFVCLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...ACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GCPLPKPTLVGGGILQGLTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QFYPQLRNHVPAVLQLRLLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...CAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: GPALWCGGFSGVESSLLLSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASICSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCATCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGATCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGAGGAGAGGTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: VKCARSHPNDRVGLEEERWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...CCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SATWPGFFRHHDDRRPKMRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RAAALITLRRSRLFRRACSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: AAALITLRRSRLFRRACCDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGAAGPGGLGLTVVARCLFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCATTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: GETGEGHLGSGESWLPHPLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VMLQLSDLAVELGYHSVTACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...CGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: QACPGRSVKAQGSRWRPEPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: IIRGRLPASKAHSRRRWNTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...ATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCAGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp ACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: TWGSLVGIHSQP*PAFSRTLFRLL
Trigger: GAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAGAGTCAAAGCCTCCTCGAGGAACCACAGGCTCTGCCTCTGCTGTGGTGATCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: GESKPPRGTTGSASAVVIMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GATCACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMESPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCTTGTAACTTCAACTaGTCTTTCTCCAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSSCNFN*SFSKVG
Trigger: ACCCACTTTGGAGAAAGATCAGTTGAAGTTACAAGA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: ALRTGGCRVGLPLRTWETGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...AGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPLRTWETVSVKGRVKASTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAGGAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTGCTGGGTAAAGGCACTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: KEESLQSGSSRQTCWVKALFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...TGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCACCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKALLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGLTVVARCLFIVPYHGILIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSAVSMGNSESEVAALAYSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTTCTTCTGCTGCTTGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: PWNLSTRHYNSQAFLLLLARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...AAGCAGCAGAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAGCTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVACSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGC...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS-3UTR CCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RCWAWGSWSHRCGQMPLHHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...ATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: SAIMFLQSSSFVCNSWLWVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...CCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: FLSLIPALCGLQLSSCLEAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AVELGYHSVTLLLELIVSISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFACSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SSGKGMLSHPRGLYPWPVRAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...CACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR CAA 72 bp GGAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGEPPKWVQSTD*LGKGNLFSSLL
Trigger: CAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: GNSESEVAALAYLTTSAEGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: VVGLLQFYPQLRNHVPAVEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACATTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PKPTLVGGGILQGLGVKIPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...TATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAASHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGAGCAGGCACACTAGTTaGCACCATACTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLESRHTS*HHTCGG
Trigger: ACCACCACAAGTATGGTGTCAACTAGTGTGCCTGCT...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR TCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGAGGTCAAGGCTGCAGTaGGCCATGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAERSRLQ*AMIVPL
Trigger: CAGTGGCACGATCATGGCTCACTGCAGCCTTGACCT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGCAGGAGGATTGCATaGGTCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKCRRIA*VWEVKA
Trigger: AGCCTTGACCTCCCAGACTCATGCAATCCTCCTGCA...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: QWQRNAKSSTRFISMASVRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTACGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp GAAAGCGGGCTGAGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: ESGLRFGETQNSHLHMRLRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCTCAGCCCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: DRLPPRGLVSSGTMMTDGKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKALRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMELRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTACTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAGAGTCAAAGCCTCCTCGAGGAACCACAGGCTCTGCCTCTGCTGTGGTGATCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: GESKPPRGTTGSASAVVIKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GATCACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCACTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCCTCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQLFQIELVDLPKNQQLPLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...AGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGACCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTCCAAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: KSNWSRRVRISSEGGEPPKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...TGGAGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: LVVEFLSVMLQLSDLAVEPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...CTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVETPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASICKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SSIRSSAIMFLQSSSFVCLLSAA*SCPLKD
Trigger: ATCTTTCAGAGGACAGCTGCAGGCCGCAGAGAGCAG...ACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLESKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: STPKSLPSSVFRLSERLLSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLRTWETVSVKGRVKASYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: AVELGYHSVTLLLELIVSGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: GLLQFYPQLRNHVPAVLQCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...CTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGGAGGAGAGCCTCCAAAGTGGGTCCAGTCGACAGACTTGCTGGGTAAAGGCATGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: KEESLQSGSSRQTCWVKACSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...TGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLAGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKANGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTTCTTCTGCTGCTTCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PWNLSTRHYNSQAFLLLLPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...AAGCAGCAGAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMERPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQATYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp ACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCCTGCTGTATCAGTCTG +
Preference number: 4 (lower is better)
Translates to: TDLLGKGNLFSS*LCASAPCCISL
Trigger: CAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAACSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SWRSGHTTNHRWAPKSSLGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATAGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: PKPTLVGGGILQGLGVKIGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...TATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GCPLPKPTLVGGGILQGLYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...CAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLERCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLEPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FLSLIPALCGLQLSSCLEFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCATCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGTCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LRTGGCRVGLPLRTWETVSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCAGCCTGTGCTAGGCTaGGTAGTTGGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSQPVLG*VVGTTP
Trigger: GGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASILILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LGLGVLVSPLWPDASSLCTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...GCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGAGTGAGGCTTGCAAGTaGGTCACTGTGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLSEACK*VTVPGQ
Trigger: CTGCCCAGGCACAGTGACTCACTTGCAAGCCTCACT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTAGTGAGGCTTGCAAGTaGGTCACTGTGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLSEACK*VTVPGQ
Trigger: CTGCCCAGGCACAGTGACTCACTTGCAAGCCTCACT...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTAGTGAGGCTTGCAAGTaGGTCACTGTGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFSEACK*VTVPGQ
Trigger: CTGCCCAGGCACAGTGACTCACTTGCAAGCCTCACT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTGCAGGAGGATTGCATaGGTCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAECRRIA*VWEVKA
Trigger: AGCCTTGACCTCCCAGACTCATGCAATCCTCCTGCA...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp ATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTCTAGGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: INTKTPVVRTTTSVSISRGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GIIGSMVINTKTPVVRTTLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...CGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PQEPTAACSRTPSAAGPTMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...AGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSCSCSPPASSVIPGSGCCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...ACAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAASSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: PPQKDDHTGEAARFQSPLKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTTACTGCCCCGGGCGCTaGTGGGCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GCPSLVTSTDLSWQHYVPYCPGR*WAWGSW
Trigger: CCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGTA...AGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAATGCCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: QCHLKKMIIRGRLPASKAPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...GGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IIRGRLPASKAHSRRRWNESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...ATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQANLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTAACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTGCAAGTGAGTCACTGTaGCTGGGCAGAGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVASESL*LGRGIA
Trigger: TGCTATCCCTCTGCCCAGGCACAGTGACTCACTTGC...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCATGCCATCATTGCAGATaGCAATGCAGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPCHHCR*QCSGKG
Trigger: GCCCTTCCCACTGCATTGGCATCTGCAATGATGGCA...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGTCACTGTGCCTGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SGIIRLLKVRLASESLCLSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CAGGCACAGTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: STPKSLPSSVFRLSERLLWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNREVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCACCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LSAVSMGNSESEVAALAYRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: LGSEPTVVGMLADASPIVDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSAVSMGNSESEVAALAYYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLERRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKARRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCACCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAATCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: PDASSLCPTMESEHPSLQSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCCTTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: LQLFQIELVDLPKNQQLPCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...AGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASITKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLEKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCACCTGGTGTCTTTCATaGTCACGTCTCCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCTWCLS*SRLLPL
Trigger: GAGGGGGAGGAGACGTGACCATGAAAGACACCAGGT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643875.1
3UTR CAA 72 bp CTGTTGCAAATGGGGACGGCCCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTTTTACCCAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LLQMGTAQESGV*FPAALLLPSNV
Trigger: CACATTACTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTCCCCATTTGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp GTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCTGAGCACCCGTCATTA +
Preference number: 4 (lower is better)
Translates to: VLVSPLWPDASS*CPTMESEHPSL
Trigger: TAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QWQRNAKSSTRFISMASVGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: RLLGFPEEFLFHQLYQRLHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...AAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR TCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATTCACGCTGGCGCCCTaGGAACTGGAGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLFTLAP*ELEAAE
Trigger: CTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PQEPTAACSRTPSAAGPTYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...AGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCCCTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: ALRTGGCRVGLPLRTWETSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...AGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTCCAGTCGACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VQSTDLLGKGNLFSSLLCRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVELGYHSVTLLLELIVSFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: SSIRSSAIMFLQSSSFVCDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...ACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTCTCCCACCGACTGCTaGATGGGCCTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSPTDC*MGLPSG
Trigger: ACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: TGTRSPGHIEESRTGKQASDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTAGTGAGGCTTGCAAGTaGGTCACTGTGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTASEACK*VTVPGQ
Trigger: CTGCCCAGGCACAGTGACTCACTTGCAAGCCTCACT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATGCAGGAGGATTGCATaGGTCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLECRRIA*VWEVKA
Trigger: AGCCTTGACCTCCCAGACTCATGCAATCCTCCTGCA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDRSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLWWFSYQPCRWGTQSLRILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000644997.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMETGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: PTLVGGGILQGLGVKILVLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: LQRVACGGSVISRVDGELKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKADFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAASTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTGCAAGTGAGTCACTGTaGCTGGGCAGAGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFASESL*LGRGIA
Trigger: TGCTATCCCTCTGCCCAGGCACAGTGACTCACTTGC...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACTGATGCAGGAGGATTaGATGAGTCTGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKLMQED*MSLGGQ
Trigger: TTGACCTCCCAGACTCATGCAATCCTCCTGCATCAG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGTGCCATCATTGCAGATaGCAATGCAGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWCHHCR*QCSGKG
Trigger: GCCCTTCCCACTGCATTGGCATCTGCAATGATGGCA...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACCCCCGTCGTATTTGTaGCATCATTGCAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKPPSYL*HHCRCQ
Trigger: TTGGCATCTGCAATGATGGCACAAATACGACGGGGG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGATGTCAGGGAAGAATaGAAGGCCTCTTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPDVREE*KASWDR
Trigger: CCTATCCCAAGAGGCCTTGCATTCTTCCCTGACATC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GTCCAGTCGACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VQSTDLLGKGNLFSSLLCPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTATGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CCA 90 bp GGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: GVVIPQTIDGLQRVAWEVVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: SAVSMGNSESEVAALAYLRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGGGTCAGCTTCACCAGAAAGCAGAGGAGAGAGCAGGCACACTAGTTGACACCAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: KGQLHQKAEERAGTLVDTRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...GGTGTCAACTAGTGTGCCTGCTCTCTCCTCTGCTTTCTGGTGAAGCTGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: VELGYHSVTLLLELIVSSRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGACACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAASRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSWSHRCGQMPLHCALPWSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: VELGYHSVTLLLELIVSSCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCAGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTCCAGTCGACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQSTDLLGKGNLFSSLLCGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMECSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCGCCCTGCCACAGGCTaGGAATCAGTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFRPATG*ESVTPR
Trigger: TCTGGGTGTGACTGATTCCCAGCCTGTGGCAGGGCG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGTAATCCCAGGATTTTaGGAGGCCCAGGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNVIPGF*EAQVGG
Trigger: TCCTCCTACCTGGGCCTCCCAAAATCCTGGGATTAC...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSTWCLS*SLTVPP
Trigger: TGGAGGGACTGTGAGTGACCATGAAAGACACCAGGT...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000642854.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRPVLST*CLSWSL
Trigger: GAGTGACCATGAAAGACACCAGGTTGACAGCACTGG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: SAVSMGNSESEVAALAYLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGTCACTGTGCCTGCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: SGIIRLLKVRLASESLCLHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...CAGGCACAGTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR TCA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTTCTTCTGCTGCTTGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PWNLSTRHYNSQAFLLLLGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...AAGCAGCAGAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LQLFQIELVDLPKNQQLPDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...AGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: PPQKDDHTGEAARFQSPLLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...GAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLEETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGCCGCATGGATGAGCTaGGGACCCTGTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDAAWMS*GPCADT
Trigger: CGTGTCTGCACAGGGTCCTCAGCTCATCCATGCGGC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QSCSCSPPASSVIPGSGCHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...ACAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCAGTGAGGCTTGCAAGTaGGTCACTGTGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFSEACK*VTVPGQ
Trigger: CTGCCCAGGCACAGTGACTCACTTGCAAGCCTCACT...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAAGGTCAAGGCTGCAGTaGGCCATGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLRSRLQ*AMIVPL
Trigger: CAGTGGCACGATCATGGCTCACTGCAGCCTTGACCT...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAGTGGGAAGGGCAAATaGCAGCTTAGTGTTACTATG +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRSGKGK*QLSVTM
Trigger: CATAGTAACACTAAGCTGTCATTTGCCCTTCCCACT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCGCTCGAAGGCGCTGTaGTGGCTCCAGGACGTGTGC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSARSKAL*WLQDVC
Trigger: GCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: VGGVVIPQTIDGLQRVAWKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...CCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR GCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR GCA 90 bp ATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTCTAGGATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: INTKTPVVRTTTSVSISRILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...CCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCATCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGATCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQLYQRLYCKGVTDQVGSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGCTCGCTGCTGCTGCTaGTGCTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFARCCC*CCLHHL
Trigger: GAGGTGGTGGAGGCAGCAGCAGCAGCAGCAGCGAGC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASISVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLPSSVFRLSERLLVMPSKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: LGSEPTVVGMLADASPIVKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAGCCATGGGCACAGGTaGTCGGCTCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSHGHR*SALPGR
Trigger: CCTGCCTGGAAGAGCCGAGCACCTGTGCCCATGGCT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSLKVLH*GHYQTV
Trigger: AACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: YQLYQRLYCKGVTDQVGHSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...ATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: VMRTQKGDEVARVHSIKASKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACCCCGCACACCCAGCATaGGGGAGTCCAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: SRRCCFPDCGIIGSMVINPAHPA*GSPAWQ
Trigger: TTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGG...GTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR CCA 90 bp TGGGGTTCCCAGAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: WGSQRSSFSTCSCTKDFTVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTCTGGGAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp ACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TPYLWWFSYQPCRWGTQSEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...ACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: SLWWFSYQPCRWGTQSLRGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGGTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: LVVEFLSVMLQLSDLAVEPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SWRSGHTTNHRWAPKSSLRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLERGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RLLGFPEEFLFHQLYQRLRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...AAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp GGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTGTCCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: GQVYGSKGLLWCVRPKLVHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...GACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QFYPQLRNHVPAVLQLRLKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCACCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSIRSSAIMFLQSSSFVCPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...ACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLETTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: PQEPTAACSRTPSAAGPTISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...AGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGAGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: HLQLYQRLYCKGVTDQVGGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: KPTLVGGGILQGLGVKILCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGAGAACTGGAGGCTGCCGAGTGGGTCTTCCGCTGAGAACCTGGGAGACTGTCTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LRTGGCRVGLPLRTWETVFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAACATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGCCTGCCCTCTGGTGTaGGGGTTTCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFACPLV*GFLWGR
Trigger: TCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTCCACCGACTGCTGAATaGGCCTGCCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVPPTAE*ACPLVW
Trigger: CCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGG...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: VMRTQKGDEVARVHSIKAVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKREVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LQRVACGGSVISRVDGELSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAACAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCATGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGLTVVARCLFIVPYHGILKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAGGAACACGCTCCCCTaGGCACATCGAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNRNTLP*AHRRVP
Trigger: CGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCATGACCAGAAGCCATaGGCACAGGTGCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICHDQKP*AQVLGS
Trigger: AGAGCCGAGCACCTGTGCCCATGGCTTCTGGTCATG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCRAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642854.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAACACCATACTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPTPYLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGTATGGTGT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCAGATGCCAATGCAGTaGGAAGGGCAAATGACAGCT +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWQMPMQ*EGQMTA
Trigger: AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTAACTTGGCGATAGTGTaGGCTAATCAGCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVNLAIV*ANQLGP
Trigger: TGGCCCAAGCTGATTAGCCCACACTATCGCCAAGTT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642646.1
3UTR CAA 72 bp CTGGAGAGTGAAGGTGCAGCAGATAGGTATACTGATTaGAGTCACTCCACACCAGGCAGCTTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LESEGAADRYTD*SHSTPGSFLLQ
Trigger: CTGGAGAAGGAAGCTGCCTGGTGTGGAGTGACTCAAATCAGTATACCTATCTGCTGCACCTTCACTCTCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: LQRVACGGSVISRVDGELMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PEEFLFHQLYQRLYCKGVPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...CACACCCTTACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACAAAAGCCTTTCCTGATGAAAGTTACCTTGCCTGGAGTTTGACATCCTCTAGACCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TKAFPDESYLAWSLTSSRPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...TCTAGAGGATGTCAAACTCCAGGCAAGGTAACTTTCATCAGGAAAGGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCCAGAGCTGCTGCTTTaGTCACCTTGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSPELLL*SPCGGA
Trigger: GGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VMLQLSDLAVELGYHSVTFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGATTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: QFYPQLRNHVPAVLQLRLLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...CAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACATCTGGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSGCPSLVTSTDLSWQHYVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...ATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCCAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGTCGGGGGAGACGGGTaGGGGCCATCTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVVGGDG*GPSRFR
Trigger: CCTGAACCTAGATGGCCCTCACCCGTCTCCCCCGAC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: SAVSMGNSESEVAALAYLETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCCCAGGCCGCATGGATaGGCTGAGGACCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFPRPHG*AEDPVQ
Trigger: CTGCACAGGGTCCTCAGCTCATCCATGCGGCCTGGG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: CGQMPLHCALPWNLSTRHDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCTCGGGGCCTGTGCTaGCTCTGGTTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVPRGLC*LWLVSG
Trigger: ACCTGACACTAACCAGAGTCAGCACAGGCCCCGAGG...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCAGCAGGCACACTAGTTaGCACCATACTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSSRHTS*HHTCGG
Trigger: ACCACCACAAGTATGGTGTCAACTAGTGTGCCTGCT...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000644997.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VLQLFQIELVDLPKNQQLILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...CAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCTGAGAACTGGAGGCTaGCGAGTGGGTCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDLRTGG*RVGLPL
Trigger: CAGCGGAAGACCCACTCGGCAGCCTCCAGTTCTCAG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCTCATACGGGGGAGGCTaGCCGCTTCCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVSYGGG*PLPKPT
Trigger: AGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGA...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDTGLGG*GSHLKE
Trigger: CTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTGTCCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: GQVYGSKGLLWCVRPKLVLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKANSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: CSCLIWLWSLVTIVSRCSFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCLIWLWSLVTIVSRCSWFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...CCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: REHVGQPSGYTQPAFASIHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTGTCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GQVYGSKGLLWCVRPKLVESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GACAAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTGCTGTATCAGTCTGTCCACAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: TCSAPCCARLLPAVSVCPQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...TGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKARCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: KPTLVGGGILQGLGVKILRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...CAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPSSVFRLSERLLVMPSDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...GGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGCCGGGTCTTCGCTCTaGCCAAACCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFAGSSL*PNPPPA
Trigger: GGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: SSAIMFLQSSSFVCNSWLLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...GAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACTGATGCAGGAGGATTaGATGAGTCTGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSLMQED*MSLGGQ
Trigger: TTGACCTCCCAGACTCATGCAATCCTCCTGCATCAG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACTGATGCAGGAGGATTaGATGAGTCTGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKALMQED*MSLGGQ
Trigger: TTGACCTCCCAGACTCATGCAATCCTCCTGCATCAG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCCCCCGTCGTATTTGTaGCATCATTGCAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLPPSYL*HHCRCQ
Trigger: TTGGCATCTGCAATGATGGCACAAATACGACGGGGG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACCCCCGTCGTATTTGTaGCATCATTGCAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAPPSYL*HHCRCQ
Trigger: TTGGCATCTGCAATGATGGCACAAATACGACGGGGG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATGTCAGGGAAGAATaGAAGGCCTCTTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLDVREE*KASWDR
Trigger: CCTATCCCAAGAGGCCTTGCATTCTTCCCTGACATC...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTTCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: GYQHQDACCEDNDVSVHLPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...AAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAAGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CCA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSGKGMLSHPRGLYPWPVEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGACCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: QFYPQLRNHVPAVLQLRLLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: LSDLAVELGYHSVTLLLEESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: SWRSGHTTNHRWAPKSSLRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMERVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: LQRVACGGSVISRVDGELPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGGGGTTCCCAGAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: WGSQRSSFSTCSCTKDFTRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...AGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTCTGGGAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ATWPGFFRHHDDRRPKMSHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QQWQRNAKSSTRFISMASYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...ACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGGAGGAGAGGTTGCTaGGGTTCCCAGAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCRRRGC*GSQRSS
Trigger: GGAACTCCTCTGGGAACCCCAGCAACCTCTCCTCCT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: EEFLFHLQLYQRLYCKGVIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...CACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGATTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTGGGCGCTGCTGGGCCTaGGGGTCTTGGTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPGRCWA*GSWSHR
Trigger: ACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCAGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTTGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GYQHQDACCEDNDVSVHLGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...AAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTGGGGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: CSRTPSAAGPTHCLRAFGAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...CCCAAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVETKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCATCTCACCAAGGTCCTaGCCGGGTCTTCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSISPRS*PGLRSA
Trigger: GGCAGAGCGAAGACCCGGCCAGGACCTTGGTGAGAT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGACTGCAGGACGGCATaGAAGAGACAGGAACACGCT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHDCRTA*KRQEHA
Trigger: AGCGTGTTCCTGTCTCTTCCATGCCGTCCTGCAGTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAGGGAAGGGTTGGTCTaGGGGTTCTCAGACTCTCAG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFREGLV*GFSDSQ
Trigger: CTGAGAGTCTGAGAACCCCCAGACCAACCCTTCCCT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: YQLPACARLSSWDHALPQLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCAATGGTACTGCCATCCTGGAACAAATACTATTGGATATTTTCATGTCTCTGAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SNGTAILEQILLDIFMSLRAPPS*TYSTSP
Trigger: GGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCT...CAGAGACATGAAAATATCCAATAGTATTTGTTCCAGGATGGCAGTACCATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACAGATGCCAATGCAGTaGGAAGGGCAAATGACAGCT +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAQMPMQ*EGQMTA
Trigger: AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCACCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTC +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSPVLST*CLSWSL
Trigger: GAGTGACCATGAAAGACACCAGGTTGACAGCACTGG...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645150.1
CDS-3UTR CCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGGATCTTTCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQDLSPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGAAAGATC...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELVCYRF*RFFIGA
Trigger: GGCCCCAATGAAGAACCTTCAGAACCTGTAGCACAC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QWQRNAKSSTRFISMASVVCYRF*RFFIGA
Trigger: GGCCCCAATGAAGAACCTTCAGAACCTGTAGCACAC...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKACSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVERQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: TPYLWWFSYQPCRWGTQSIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...ACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQETSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HLQLYQRLYCKGVTDQVGRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VELGYHSVTLLLELIVSSFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTACTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LAVELGYHSVTLLLELIVSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...TACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVTLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCCCAGAAAGCCTGCCTaGACAGGTTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICPRKPA*TGFLLV
Trigger: TACCAGCAGAAAACCTGTTCAGGCAGGCTTTCTGGG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTTAGGCTTCTCAAAGTaGGGCTTGCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFLGFSK*GLQVSH
Trigger: GTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATTAGGCTTCTCAAAGTaGGGCTTGCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLELGFSK*GLQVSH
Trigger: GTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTGTCTAGGGAGACTCTaGGTTTGCCTTCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLCLGRL*VCLLCS
Trigger: ACTACACAGAAGGCAAACTCAGAGTCTCCCTAGACA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR TCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGATGGTGCTGTAGCAGATaGATCCAATGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRWCCSR*IQWYCH
Trigger: ATGGCAGTACCATTGGATTCATCTGCTACAGCACCA...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000644997.1
CDS-3UTR GCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QQWQRNAKSSTRFISMASILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...ACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: VMRTQKGDEVARVHSIKALAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQLAVRV*SLLYQS
Trigger: AGACTGATACAGCAGGGAGCAGACGCGCACAGCAAG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGACTTGTTCAGCTCCTTaGTGTGCGCGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVTCSAP*CARLLP
Trigger: AGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGT...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: LFHLQLYQRLYCKGVTDQLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...CTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCTGCTCTCTGCGGCCTaGAGCTGTCCTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFLLSAA*SCPLAW
Trigger: CCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVSEPHT*SLRPAA
Trigger: AGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGA...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGACTTTCATTCTCTCTaGTCGAGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFDFHSL*SRPPWA
Trigger: TGCCCACGGAGGCCTCGAGCAGAGAGAATGAAAGTC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMETRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSIRSSAIMFLQSSSFVCRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...ACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATCCTGTCCAAGAGGTaGAGAATTGAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTILSKR*RIEVLF
Trigger: AAAGAGAACCTCAATTCTGCACCTCTTGGACAGGAT...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATTCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SYCNENAKRRRSCKGTFHSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...ATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCTTCTTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: PFLADTKINLHGAVADESVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...GGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: GVVIPQTIDGLQRVAWEVGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTARVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AAGGGTCAGCTTCACCAGAAAGCAGAGGAGAGAGCAGGCACACTAGTTGACACCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KGQLHQKAEERAGTLVDTHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GGTGTCAACTAGTGTGCCTGCTCTCTCCTCTGCTTTCTGGTGAAGCTGACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTACACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SAVSMGNSESEVAALAYLHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTCTTTCCGATAGGCGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALSDRRLSSFLLPLWYLSIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...ACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCGCCTATCGGAAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTGGCGCCCTGAGAACTaGAGGCTGCCGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFWRPEN*RLPSGS
Trigger: AGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCACACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKACLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGTGAGCCCACAGTGGTaGGGATGCTGGCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAVSPQW*GCWQTL
Trigger: AAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCAC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCGAAGTGAGCCCACAGTaGTGGGGATGCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTEVSPQ*WGCWQT
Trigger: CGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTC...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLEGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATCTCTCGGGAGCACGTaGGGCAGCCTAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSLGST*GSLVGI
Trigger: TATACCCACTAGGCTGCCCCACGTGCTCCCGAGAGA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QSCSCSPPASSVIPGSGCESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...ACAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFCSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGACGGCCCAAGAGTCTaGAGTTTTGTTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFDGPRV*SFVPCC
Trigger: GCAGCAGGGAACAAAACTCCAGACTCTTGGGCCGTC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAGTATCCGCAGGAGGTaGGCGGCACCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFSIRRR*AAPHLT
Trigger: GGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTGTGGCGCTGCGAAGTaGGGAGGAAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFCGAAK*GGSSSA
Trigger: GGCAGAGGAGCTTCCTCCCCACTTCGCAGCGCCACA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACACACCATACTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDTPYLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGTATGGTGT...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTATWCLS*SLTVPP
Trigger: TGGAGGGACTGTGAGTGACCATGAAAGACACCAGGT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645150.1
CDS-3UTR CCA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTC +
Preference number: 4 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCPVLST*CLSWSL
Trigger: GAGTGACCATGAAAGACACCAGGTTGACAGCACTGG...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAACCACAAACCATAGATaGGCTCCAAAGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLETTNHR*APKSSQ
Trigger: CTGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CCA 90 bp GATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCATGGTACTGCCATCCTaGAACAAATACTATTGGATA +
Preference number: 4 (lower is better)
Translates to: DRLPPRGLVSSGTMMTDGMVLPS*NKYYWI
Trigger: TATCCAATAGTATTTGTTCCAGGATGGCAGTACCAT...GCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR CAA 72 bp AAAATGCGTGGCTGCCTCTTTCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCATACCCTCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KMRGCLFHKPKY*LHRAAPYPPVQ
Trigger: TTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATGAAAGAGGCAGCCACGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVCYRF*RFFIGA
Trigger: GGCCCCAATGAAGAACCTTCAGAACCTGTAGCACAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GIIGSMVINTKTPVVRTTCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAACGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGTGGTGACATCGGCTaGACGATGAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGGDIG*TMRKAG
Trigger: GCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGCCACCTCAAAAAGATaGTCATACGGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLATSKR*SYGGGC
Trigger: GCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGGC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAISFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACACTGCGAGGTAAATaGGAGGGGGTTAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATLRGK*EGVRAG
Trigger: ACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMETTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: PDASSLCPTMESEHPSLQPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SWSHRCGQMPLHCALPWNKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...ATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTACCCACTGCAGCATaGTCAAGTGACCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHLPTAA*SSDLLT
Trigger: AGTCAACAGGTCACTTGATCATGCTGCAGTGGGTAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTTAGGCTTCTCAAAGTaGGGCTTGCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTALGFSK*GLQVSH
Trigger: GTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAA...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAAGTGGGAAGGGCAAATaGCAGCTTAGTGTTACTATG +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSSGKGK*QLSVTM
Trigger: CATAGTAACACTAAGCTGTCATTTGCCCTTCCCACT...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTACCCCAGAGCCCGGAGTaGCATGAGCTCAATTTTAAA +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLPQSPE*HELNFK
Trigger: TTTAAAATTGAGCTCATGTCACTCCGGGCTCTGGGG...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAERRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGGGCTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: WAPKSSLWWFSYQPCRWGKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SGKGMLSHPRGLYPWPVFKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSACASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GCPSLVTSTDLSWQHYVPFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...AGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAACTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCTTTCTTCTGCTGCTTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: PWNLSTRHYNSQAFLLLLPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...AAGCAGCAGAAGAAAGGCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LQRVACGGSVISRVDGELFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCACAGTGGTGGGGATaGTGGCAGACGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPQWWG*WQTLLP
Trigger: TGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GGILQGLGVKILVSKEVWPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...CCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLPSSVFRLSERLLVMPSESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: PTLVGGGILQGLGVKILVNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR GCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: GKKRQELSQRVCGLHSASEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTTCCTCATGCTCAAGTaGTTCTCGGGTAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRFLMLK*FSGNLS
Trigger: GGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGTTGGGACCACGCCCTaGCACAGGCTGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFVGTTP*HRLGIS
Trigger: ACTGATTCCCAGCCTGTGGCAGGGCGTGGTCCCAAC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HLTIQYQLPACARLSSWDFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKACKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTCAGAATTCTATCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGGCAAGTGAGTCACTGTaGCTGGGCAGAGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: VRILSGIIRLLKVRLASEASESL*LGRGIA
Trigger: TGCTATCCCTCTGCCCAGGCACAGTGACTCACTTGC...CTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGATAGAATTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR GCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCATCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGATGTCAGGGAAGAATaGAAGGCCTCTTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLDVREE*KASWDR
Trigger: CCTATCCCAAGAGGCCTTGCATTCTTCCCTGACATC...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCATCCTGTCCAAGAGGTaGAGAATTGAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLPSSVFRLSERLLVMPSILSKR*RIEVLF
Trigger: AAAGAGAACCTCAATTCTGCACCTCTTGGACAGGAT...GGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTACTGGTCTCGGAGGGTaGGGATCTCATCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCTGLGG*GSHLQS
Trigger: ACTTTGGAGATGAGATCCGCACCCTCCGAGACCAGT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000643583.1
CDS-3UTR CCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGACTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRLKVLH*GHYQTV
Trigger: AACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATCGAAGGCGCTGTGCTaGCTCCAGGACGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVSKALC*LQDVCY
Trigger: GTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAACCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTWGSPA*QEAPRH
Trigger: ATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCA...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000644997.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGGAGGTGCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TQKGDEVARVHSIKAMKEEVLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGCACCTC...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAIHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: KPTLVGGGILQGLGVKILKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLEPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLETTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCACACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: STPKSLPSSVFRLSERLLTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...CAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: CAIIADANAVGRANDSLVISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SRRCCFPDCGIIGSMVINIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...GTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCCTTCTCTTGTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: SSLFFLQTNLPHLDVLLLCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...CAAGAGAAGGACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKADTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAATGGGCCTGCCCTCTaGTGTGGGGGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFNGPAL*CGGFSG
Trigger: CCCAGAGAAACCCCCACACCAGAGGGCAGGCCCATT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCTCAGAAAGGCTACTaGTCATGCCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSQKGY*SCRPHH
Trigger: GTGATGAGGACGGCATGACCAGTAGCCTTTCTGAGA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EEFLFHLQLYQRLYCKGVGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...CACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTCCTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPSSVFRLSERLLVMPSFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GGACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCATCTTTGCAGCAATCTaGGGGGCATGTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVIFAAI*GACVTE
Trigger: TTCTGTGACACATGCCCCCCAGATTGCTGCAAAGAT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGCAAACAAGCCACATaGGACAAGGGTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGKQAT*DKGHSS
Trigger: GCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCCGTACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: SLCPVLSLGSQKGYWSCRTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...ACGGCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATAAGGGAGGGAAGGGTTaGTCTGGGGGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDKGGKG*SGGSQT
Trigger: AGTCTGAGAACCCCCAGACCAACCCTTCCCTCCCTT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAACCACAAACCATAGATaGGCTCCAAAGAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPTTNHR*APKSSL
Trigger: CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCAGATGCCAATGCAGTaGGAAGGGCAAATGACAGCT +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFQMPMQ*EGQMTA
Trigger: AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCTGAAGGTTCTTCATTaGGGCCACTACCAAACTACT +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFLKVLH*GHYQTT
Trigger: AGTAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGTCCATCTTGTCATGTaGCTCTTGCAAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFVHLVM*LLQGGQ
Trigger: CTGACCACCTTGCAAGAGCCACATGACAAGATGGAC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545250.5
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTGAGAGCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLRACC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGCTCTCAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644184.1
CDS-3UTR TCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNVCYRF*RFFIGA
Trigger: GGCCCCAATGAAGAACCTTCAGAACCTGTAGCACAC...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQECSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GAAAGCGGGCTGAGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ESGLRFGETQNSHLHMRLCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...AAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCTCAGCCCGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PEEFLFHQLYQRLYCKGVCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CACACCCTTACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR TCA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: QWQRNAKSSTRFISMASVMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCCCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCPRRLL*GQRRQC
Trigger: ACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGG...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCACATCGGCTGAACGATaGGGAAAGCGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSTSAER*GKRAEI
Trigger: AATCTCAGCCCGCTTTCCTCATCGTTCAGCCGATGT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCAATGGTCATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: LADTKINLHGAVADESNGHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...ACCATTGGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGGGAACTCAGAGTCTaGGGTAGCTGCCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGELRV*GSCPGI
Trigger: TATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGAGTGGGTCTTCCGCTaGGAACCTGGGAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFEWVFR*EPGRLS
Trigger: AGACAGTCTCCCAGGTTCTCAGCGGAAGACCCACTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: SLWWFSYQPCRWGTQSLRSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLESFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAITYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR TCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGTTAGGCTTCTCAAAGTaGGGCTTGCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PEEFLFHQLYQRLYCKGVLGFSK*GLQVSH
Trigger: GTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAA...CACACCCTTACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTAGTGGGAAGGGCAAATaGCAGCTTAGTGTTACTATG +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTASGKGK*QLSVTM
Trigger: CATAGTAACACTAAGCTGTCATTTGCCCTTCCCACT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGACCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRTLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGGT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GILQGLGVKILVSKEVWHKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: RLLGFPEEFLFHQLYQRLRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...AAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR GCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKARRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SAVSMGNSESEVAALAYLKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SCPKDLRPISTHELALRPKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACATGGGAGTAAAGGCTTaGTTTGGTGTGTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNMGVKA*FGVSGP
Trigger: TGGGCCTGACACACCAAAGCAAGCCTTTACTCCCAT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFCASAP*CISLSS
Trigger: GCTGGACAGACTGATACAGCAGGGAGCAGACGCGCA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCTTCCGGAGGGCATGCTaGTGCCTCTTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVFRRAC*CLLKRS
Trigger: TGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAA...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCCTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTCCACTGTTCCGGAGGGCATaGTGCTGCCTCTTAAAACGC +
Preference number: 4 (lower is better)
Translates to: CPSLVTSTDLSWQHYVPPLFRRA*CCLLKR
Trigger: GCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAG...TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCCTCTCGGTCATGCTaGAGCTGTCTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASSRSC*SCLIWL
Trigger: CAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNNSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFKNSI*CWTDSL
Trigger: CAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTGCAGCTGTCCTCTTaGCTGGAGTTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLQLSS*LEFDIL
Trigger: GAGGATGTCAAACTCCAGGCAAGAGGACAGCTGCAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACTCATACCTGCTCTCTaGGGCCTGCAGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVLIPAL*GLQLSS
Trigger: AGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAAGGCTACTGGTCATaGCGTCCTCATCACACTGGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKGYWS*RPHHTG
Trigger: GCCAGTGTGATGAGGACGGCATGACCAGTAGCCTTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: VMLQLSDLAVELGYHSVTSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAGGTGCAGTTCCTCATaGTCAAGTGCTTCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQRCSSS*SSASRV
Trigger: TACCCGAGAAGCACTTGAGCATGAGGAACTGCACCT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCCTACCAAATCCCCCTaGCTCAGCTGGAACACCAGA +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFPTKSP*LSWNTR
Trigger: TCTGGTGTTCCAGCTGAGGCAGGGGGATTTGGTAGG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCACTCCGGAGCTCATTTaGTCTGCGTCTTCCTATCCC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSTPELI*SASSYP
Trigger: GGGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: QLSDLAVELGYHSVTLLLQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...CAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWLKVLH*GHYQTV
Trigger: AACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFVALAR*SGCAMP
Trigger: CGGCATTGCACATCCTGACCACCTTGCAAGAGCCAC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKALMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RRGVRGRSSTPIAILCVSESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...GCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RLLGFPEEFLFHQLYQRLESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...AAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: MSGKNARPLGIGHFNACLHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: SGKGMLSHPRGLYPWPVFPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...GAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: TPYLWWFSYQPCRWGTQSDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...ACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: RLLGFPEEFLFHQLYQRLDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...AAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLEHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTATCAGCCGTGTCGATaGGGAACTCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDYQPCR*GTQSLR
Trigger: CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: HQLYQRLYCKGVTDQVGHPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...ATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
CDS-3UTR CCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: SSGKGMLSHPRGLYPWPVISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGTCCAGCACTTCCATTaGGGAGGTAGAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVVQHFH*GGRGHT
Trigger: GGTGTGCCCTCTACCTCCCCAATGGAAGTGCTGGAC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGGAGAGCCTCCAAAGTaGGTCCAGTCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFGEPPK*VQSTDL
Trigger: CAAGTCTGTCGACTGGACCCACTTTGGAGGCTCTCC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLVGGGILQGLGVKILVSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCATTCTCTCTTCCTTCCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: DGVVCVDMVLQNPFSLPSCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GGAAGGAAGAGAGAATGGATTCTGCAAGACCATGTCTACACAGACAACACCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGCAGCTGTCTGATCTaGCTGTGGAGCTTGGTTACC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDCSCLI*LWSLVT
Trigger: GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACCGTCCTCATCACACTaGCTCTCGCTCTTATTACGA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKPSSSH*LSLLLR
Trigger: TCGTAATAAGAGCGAGAGCCAGTGTGATGAGGACGG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGACACCAACTGGCCCTTaGATTAGAACACACTGCGAG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQTPTGP*IRTHCE
Trigger: CTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTTCCCAAAGGGTGTGTaGTCTCCACAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAFPKGV*SPQCQL
Trigger: GAGCTGGCACTGTGGAGACCACACACCCTTTGGGAA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGCTCCTTCCCTCCTATaGAGAACAGGTTTTACCACC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALAPSLL*RTGFTT
Trigger: GGTGGTAAAACCTGTTCTCCATAGGAGGGAAGGAGC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTGCTCGAGGCCTCCGTaGGCACTAAGATTTCGTACC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSACSRPP*ALRFRT
Trigger: GGTACGAAATCTTAGTGCCCACGGAGGCCTCGAGCA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGACACCATACTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLETPYLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGTATGGTGT...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTTWCLS*SLTVPP
Trigger: TGGAGGGACTGTGAGTGACCATGAAAGACACCAGGT...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000642854.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRTWCLS*SLTVPP
Trigger: TGGAGGGACTGTGAGTGACCATGAAAGACACCAGGT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTC +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSPVLST*CLSWSL
Trigger: GAGTGACCATGAAAGACACCAGGTTGACAGCACTGG...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000642854.1
3UTR CAA 72 bp ATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTaGAAACGTGCATTCACACCTCCTGTTCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: MNLHSDPGNRKA*KRAFTPPVLCQ
Trigger: TTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
3UTR CAA 72 bp ACCCTAATGGCCTGGGAAATGATGGTCACATACACTTaGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLMAWEMMVTYT*QKLFGPSEPFC
Trigger: GCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCATCATTTCCCAGGCCATTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp AGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAACCTTCCACATCTGGAT +
Preference number: 4 (lower is better)
Translates to: SVTLLLELIVSS*FFLQTNLPHLD
Trigger: ATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTGCAGTCTTATGACATaGCCCAGTAACGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLCSLMT*PSNERM
Trigger: CATCCTCTCGTTACTGGGTCATGTCATAAGACTGCA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACGTCAGTGTCCATCTCTAGGGATAATAAAAGAGTTACCCTTCTTGGCAGACACATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: TSVSISRDNKRVTLLGRHMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...GTGTCTGCCAAGAAGGGTAACTCTTTTATTATCCCTAGAGATGGACACTGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR TCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLERQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATATGAGGAAAGCGGGCTaGGATTTGGTGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDMRKAG*DLVRHR
Trigger: TCTGTGTCTCACCAAATCTCAGCCCGCTTTCCTCAT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTATTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp GAAAGCGGGCTGAGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: ESGLRFGETQNSHLHMRLFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...AAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCTCAGCCCGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR TCA 90 bp CCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGFLSYCNENAKRRRSCKARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...CTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGTGCGGATCTCATCTaGAGGAGGAGAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGADLI*RRRASK
Trigger: TTTGGAGGCTCTCCTCCTTCAGATGAGATCCGCACC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACGCTGCTCCTGGAGCTaGTTGTATCTAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLRCSWS*LYLACS
Trigger: AGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTACTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTATCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAAGGCCCAGCAAGCTaGGATGGCCTAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKGPAS*DGLKVQ
Trigger: CTGCACCTTTAGGCCATCTCAGCTTGCTGGGCCTTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCATTGGCCAAACAGCTaGGACAGGTATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHWPNS*DRYAHP
Trigger: TGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGTTCTGCTGGCTACATaGAACGCATACCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNVLLAT*NAYPVF
Trigger: GAAAACTGGGTATGCGTTTCATGTAGCCAGCAGAAC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAAGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: PDASSLCPTMESEHPSLQDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp TCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACAAGCTCCCCGACATTTaGTTGTTGGGCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRRCCFPDCGIIGSMVINKLPDI*LLGHSL
Trigger: GAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTT...GTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGGTCAGGATGTGCAATaGCGGCTGAGAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVGQDVQ*RLRAGF
Trigger: GAAACCAGCTCTCAGCCGGCATTGCACATCCTGACC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: SSGKGMLSHPRGLYPWPVRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTCTAGGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: INTKTPVVRTTTSVSISRKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp CTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCCTAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: LQLFQIELVDLPKNQQLPKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...AGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: SPIQTPGLSFSEPHTCSLGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...CAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGCCAGAATATAGGAAGTTCCACTTAATAAAAACACAAAAGCCTTTCCTGATGTTCAGCTCCTTGCTGTaGGCGTCTGCTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPEYRKFHLIKTQKPFLMFSSLL*ASAPCC
Trigger: ACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAA...CATCAGGAAAGGCTTTTGTGTTTTTATTAAGTGGAACTTCCTATATTCTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCCCGCAATCATGTTCCTaGAGTCCTCCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTPQSCS*SPPASS
Trigger: AGACGAAGCTGGAGGACTGCAGGAACATGATTGCGG...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKKNSIC*WTDSLF
Trigger: AAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: LELIVSSLFFLQTNLPHLPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...CAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGGTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LVVEFLSVMLQLSDLAVEHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTCGTTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LVDLPKNQQLPVQELHLLHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: CHISFGSQSSSPLASPLFKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAACCTCTCCCAGTGACTaGTCCTTCCCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVTSPSD*SFPPME
Trigger: CTCCATAGGAGGGAAGGAGCAGTCACTGGGAGAGGT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: MPLHCALPWNLSTRHYNSGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...ACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTGCCCAGGACTGAATTaGCTCTCGAGAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRCPGLN*LSRVIL
Trigger: CAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGATCCGAGTAGGTTATaGACATTGGCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQDPSRL*TLAKQL
Trigger: CAGCTGTTTGGCCAATGTGCATAACCTACTCGGATC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATGGAGTTTTGTTCCCTaGTGCCCTGCTTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLWSFVP*CPAFTQ
Trigger: CTGGGTAAAAGCAGGGCAGCAGGGAACAAAACTCCA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCTCCCCACAAGAGTTCTaGCAAAGCAGAGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFSPQEF*QSRVLE
Trigger: TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGA...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHLKVLH*GHYQTV
Trigger: AACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTCAGAATTCTATCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VRILSGIIRLLKVRLASEPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGATAGAATTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CCA 90 bp CCCTTCTTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: PFLADTKINLHGAVADESMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...GGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GTCAGAATTCTATCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VRILSGIIRLLKVRLASEPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...CTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGATAGAATTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CCA 90 bp CAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: QQWQRNAKSSTRFISMASLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...ACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: GEVGGVVIPQTIDGLQRVLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: TQKGDEVARVHSIKAMKEPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: VMRTQKGDEVARVHSIKAPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCAATGGTCGAGGGTCCAGTTCATaGTCCTTGGATCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LADTKINLHGAVADESNGRGSSS*SLDPVT
Trigger: AGTGACTGGATCCAAGGACCATGAACTGGACCCTCG...ACCATTGGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR CCA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAATCCGAATGACAGAGTaGGGCTGGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVIRMTE*GWRRRG
Trigger: ACCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGAT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGAGTAAAGGCTTGCTTTaGTGTGTCAGGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LFHLQLYQRLYCKGVTDQSKGLL*CVRPKL
Trigger: AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACT...CTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSACSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AVELGYHSVTLLLELIVSFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644255.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGAAGCTTTTTGAACTaGGAAGTGAGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGSFLN*EVSPQW
Trigger: CCACTGTGGGCTCACTTCCCAGTTCAAAAAGCTTCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCAGGCTATGTCCTCCTaGAAGGGACAAAACCAGACT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDQAMSS*KGQNQT
Trigger: AGTCTGGTTTTGTCCCTTCCAGGAGGACATAGCCTG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGAAAGCCAAGTTCACTaGCTCCTTCCTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCESQVH*LLPTKS
Trigger: GGATTTGGTAGGAAGGAGCCAGTGAACTTGGCTTTC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGCTAGGCTGAGTAGTTaGGACCACGCCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKARLSS*DHALPQ
Trigger: CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTAAAGCATGTACCCTaGAGAGTGAAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLKHVP*RVKVQQ
Trigger: CTGCTGCACCTTCACTCTCCAGGGTACATGCTTTAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAGAGGATGGATAATGTaGCGCTGCGAAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFRGWIM*RCEVGR
Trigger: CCTCCCCACTTCGCAGCGCCACATTATCCATCCTCT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACACTTATCTCAGAGGATaGATAATGTGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHTYLRG*IMWRCE
Trigger: TTCGCAGCGCCACATTATCCATCCTCTGAGATAAGT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLTWCLS*SLTVPP
Trigger: TGGAGGGACTGTGAGTGACCATGAAAGACACCAGGT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDPVLST*CLSWSL
Trigger: GAGTGACCATGAAAGACACCAGGTTGACAGCACTGG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCATACATCAGAATCACCTaGAGAGCTTACAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSYIRIT*RAYRNS
Trigger: AGAGTTTCTGTAAGCTCTCCAGGTGATTCTGATGTA...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTARQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR TCA 90 bp AGCAGTGTGAAATTTTCCCAACCACATACTAAATCTGACCCAAAGGGTCAGCTTGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSVKFSQPHTKSDPKGQLVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...AAGCTGACCCTTTGGGTCAGATTTAGTATGTGGTTGGGAAAATTTCACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGTCACTAATTCCGGATaGATTCGCACATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLVTNSG*IRTCSI
Trigger: GATGGAGCATGTGCGAATTCATCCGGAATTAGTGAC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAAATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VIPQTIDGLQRVAWEVNKIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...TTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAATAGCCATCTTCATATaGGGCTTCTGTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLIAIFI*GFCGIQ
Trigger: CTGGATCCCACAGAAGCCTCATATGAAGATGGCTAT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCATTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: GILQGLGVKILVSKEVWHFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...ATGCCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACATCTGGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGCCAGGTGGCTCTTCTaGTCCTCTGTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSGCPSLVTSTDLSWQHYARWLF*SSVIQK
Trigger: CTTCTGAATGACAGAGGATCAGAAGAGCCACCTGGC...ATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCCAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCCCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGCCAACCCAGTTATCTaGACTTCGGGAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSANPVI*TSGKQK
Trigger: TTTCTGCTTTCCCGAAGTTCAGATAACTGGGTTGGC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACACTACCTGGTCTAATTaGGAGCCAACCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNTTWSN*EPTQLS
Trigger: AGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATGGGCACCTTCAACATaGCTCCAGGTCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVWAPST*LQVSFS
Trigger: GGAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATTGGTGCTGTAGCAGATaGATCCAATGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNWCCSR*IQWYCH
Trigger: ATGGCAGTACCATTGGATTCATCTGCTACAGCACCA...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642344.1
CDS-3UTR TCA 90 bp CAGCCAGAATATAGGAAGTTCCACTTAATAAAAACACAAAAGCCTTTCCTGATGCCTGCAGCTGTCCTCTaGAAGATACAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPEYRKFHLIKTQKPFLMPAAVL*KIQTSQ
Trigger: CTGGCTGGTCTGTATCTTTCAGAGGACAGCTGCAGG...CATCAGGAAAGGCTTTTGTGTTTTTATTAAGTGGAACTTCCTATATTCTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR TCA 90 bp GGCACACTAGTTGACACCATACTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGACAAGTCCAGGAACTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTLVDTILVVVQLSAVSMTSPGT*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGTTCCTGGACTTGT...CATCGACACGGCTGATAACTGAACCACCACAAGTATGGTGTCAACTAGTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR GCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDYFSFQ*CQPGVF
Trigger: AAAGACACCAGGTTGACAGCACTGGAAACTGAAGTA...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRYFSFQ*CQPGVF
Trigger: AAAGACACCAGGTTGACAGCACTGGAAACTGAAGTA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATATCCTGTCCAAGAGGTaGTTGTCATGTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SYCNENAKRRRSCKGTFHILSKR*LSCGSC
Trigger: GCAAGAGCCACATGACAAGCACCTCTTGGACAGGAT...ATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: RGLVSSGTMMTDGQKCQRKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GKNARPLGIGHFNACLDSKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACACAGGCTCTGCCTCTaGTGTGGTGATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVHRLCL*CGDLRK
Trigger: CTTTCTGAGATCACCACAGCAGAGGCAGAGCCTGTG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTAATTCCTCTCGGTCATaGTGCAGCTGTCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSANSSRS*CSCLIW
Trigger: CCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCCAAGAACCAACAGCTaGCTGTTCAAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDPRTNS*LFKNSI
Trigger: GATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACATTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACCGTTGTGGCCAGATaGCTCTTCATTGTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTVVAR*LFIVPY
Trigger: GTAGGGCACAATGAAGAGGCATCTGGCCACAACGGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMESVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCATTCTCTCTTCCTTCCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: DGVVCVDMVLQNPFSLPSQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GGAAGGAAGAGAGAATGGATTCTGCAAGACCATGTCTACACAGACAACACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPNLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLSEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCAGCTGAGACAGGTATaGTCACCCATAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQQLRQV*SPIVIS
Trigger: AGAAATCACTATGGGTGAGCATACCTGTCTCAGCTG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTGCTTGTTCTGCAGTTACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: RLSSFLLPLWYLSACSAVTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...AACTGCAGAACAAGCACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp GCTCTTTCCGATAGGCGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: ALSDRRLSSFLLPLWYLSSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...ACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCGCCTATCGGAAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCGAGCAGATAAGGACTaGAGGACGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFRADKD*RTAWKR
Trigger: TCTCTTCCATGCCGTCCTGCAGTCCTTATCTGCTCG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACTGGTCTCGGAGGGTaGGGATCTCATCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTGLGG*GSHLQS
Trigger: ACTTTGGAGATGAGATCCGCACCCTCCGAGACCAGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642627.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLKVLH*GHYQTV
Trigger: AACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PGFLSYCNENAKRRRSCKPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...CTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp GGCTCTCGCTCTTATTACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: GSRSYYEITLEPSYPGSFLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...AAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTAATAAGAGCGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp GGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTAGAGTGCGTACACACTaGCATGGAGATGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: GCPSLVTSTDLSWQHYVPRVRTH*HGDGRD
Trigger: ATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCT...AGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QWQRNAKSSTRFISMASVHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TQKGDEVARVHSIKAMKEKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGGTGTGACTGTGGCCTaGGGGAGTGAAATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKGVTVA*GSEMCT
Trigger: CGTGCACATTTCACTCCCCCAGGCCACAGTCACACC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LELIVSSLFFLQTNLPHLMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...CAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLSRQTC*VKATCS
Trigger: TGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTGCAGTAAAAGCAACTaGTCTCGGAGGGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFCSKSN*SRRVRI
Trigger: GATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCATTGTGCCCTACCATaGAATCTGAGCACCCGTCAT +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHCALP*NLSTRH
Trigger: ATGACGGGTGCTCAGATTCCATGGTAGGGCACAATG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCCCAGCAAGCTGAGATaGCCTAAAGGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFPSKLR*PKGAVP
Trigger: AGGAACTGCACCTTTAGGCCATCTCAGCTTGCTGGG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTGGTATCTTGTTCTATaGCACAGATCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELWYLVL*HRSLGH
Trigger: ATGCCCAAGAGATCTGTGCCATAGAACAAGATACCA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: CQHSPGLCLDCSAITNMELSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PHLTIQYQLPACARLSSWLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGCTCCAAAGAGTAGCCTaGGAAGTTAATAAAGTACAT +
Preference number: 4 (lower is better)
Translates to: SWRSGHTTNHRWAPKSSLLQRVA*EVNKVH
Trigger: ATGTACTTTATTAACTTCCCAGGCTACTCTTTGGAG...CAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
3UTR CAA 72 bp GGAGTTCTTTGCAACATGAAAGCCTACATTTTTAGGTaGGGCACCTTCAACATGACTCCAGGTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GVLCNMKAYIFR*GTFNMTPGLIL
Trigger: GAGAATGAGACCTGGAGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGCTTTCATGTTGCAAAGAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp ACGCTTATTGTACTAATACCTTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACTGTCACCTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: TLIVLIPLPRTE*PLESNTVTFPS
Trigger: GGATGGAAAGGTGACAGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAATAAGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp AATCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATaGGTAGCATGGTTATCAACACCAAGACGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NQEDAVSQTVES*VAWLSTPRRLL
Trigger: CAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR TCA 90 bp AGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SGKGMLSHPRGLYPWPVFRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...GAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACATAAGGGCTGGTGGTaGCATCGGCTGAACGATGAG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKHKGWW*HRLNDE
Trigger: CTCATCGTTCAGCCGATGTCACCACCAGCCCTTATG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTGAAGATCACTTAGAGTaGCAGAACCTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GCPSLVTSTDLSWQHYVPEDHLE*QNLCCQ
Trigger: CTGGCAGCAAAGGTTCTGTCACTCTAAGTGATCTTC...AGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGFLSYCNENAKRRRSCKYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...CTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR TCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATTTTGGGAAACCTGACTaGGCAGCAGCTCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHFGKPD*AAAQCD
Trigger: GTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAAA...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCAAATAGAGCTCGTTaGCCTCCCCAAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPNRAR*PPQEPT
Trigger: TGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTCCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFLCGI*VLVLQL
Trigger: CAACTGCAGAACAAGCACTCAGATACCACAAAGGAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTCTTTCTTGGCCAGGTaGGATTCCAGTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDSFLAR*DSSSKI
Trigger: GATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTCCCATTTCCACACATaGACTTGCACTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFSHFHT*TCTQTL
Trigger: CAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCCAGCTCCAGATTTCTaGAACAGGCTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSPAPDF*NRLLFT
Trigger: TGTAAACAGAAGCCTGTTTCAGAAATCTGGAGCTGG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGGTAACCTCTCCCAGTaGCTGCTCCTTCCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKGNLSQ*LLLPSY
Trigger: ATAGGAGGGAAGGAGCAGTCACTGGGAGAGGTTACC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGTGTCACATATAAGCTaGCATGAACAAGAGGCGTAT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFVSHIS*HEQEAY
Trigger: ATACGCCTCTTGTTCATGTCAGCTTATATGTGACAC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGTTTCAGGATTCACTaGTGGGATTTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSFRIH*WDFLPF
Trigger: AAAGGGAAGGAAATCCCATCAGTGAATCCTGAAACT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTCTCCCAACCGTAGTTaGATAAAACCCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFSPNRS*IKPTAS
Trigger: GGAGGCTGTGGGTTTTATTCAACTACGGTTGGGAGA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGATCAAGTGACCTGTTaGCTCTTGGCAGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDDQVTC*LLAGLS
Trigger: TGATAAACCTGCCAAGAGTCAACAGGTCACTTGATC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTGCAGCATGATCAAGTaGCCTGTTGACTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFCSMIK*PVDSWQ
Trigger: CTGCCAAGAGTCAACAGGTCACTTGATCATGCTGCA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGGCAGTTTTCTCTCCTaGAAAACTCTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAGSFLS*KTLWTH
Trigger: GTGTGTCCACAGAGTTTTTCAGGAGAGAAAACTGCC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTCAGCGAGAAAAGGTaGGTCTCATTACGCAGAACT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFSEKR*VSLRRT
Trigger: AGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGATCAGTTTCTTTCACTaGTGGGACCCCTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLISFFH*WDPFKL
Trigger: CAGTTTAAAGGGGTCCCATCAGTGAAAGAAACTGAT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAATAAAGTACATCAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTAAGCAGGCACACTAGTTaGCACCATACTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LIKYISSGKGMLSHPRGLSRHTS*HHTCGG
Trigger: ACCACCACAAGTATGGTGTCAACTAGTGTGCCTGCT...TAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTGATGTACTTTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR TCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATGGTGCGGATCTCATCTaGAGGAGGAGAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHGADLI*RRRACS
Trigger: TGAACAAGCTCTCCTCCTTCAGATGAGATCCGCACC...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCYFSFQ*CQPGVF
Trigger: AAAGACACCAGGTTGACAGCACTGGAAACTGAAGTA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAAGGCGATGAAAGAGTaGGTACACACTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVKAMKE*VHTGME
Trigger: CTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: QQWQRNAKSSTRFISMASKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...ACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCACTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLALACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCTCTTTCCGATAGGCGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ALSDRRLSSFLLPLWYLSFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...ACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCGCCTATCGGAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCCACACCCAAGTCTTTaGCCAGTTCTGTCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFPHPSL*PVLSLG
Trigger: GCCTAAAGACAGAACTGGGCAAAGACTTGGGTGTGG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGATCCAAAAACCGTTCTaGATTCAGTCAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLIQKPF*IQSAVQ
Trigger: TTGGACAGCTGACTGAATGCAGAACGGTTTTTGGAT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTGGATTAGAACACACTaGGAGGTAAATGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFWIRTH*EVNERG
Trigger: CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGTGTGGTCTCCACAGTaGCAGCTCCAGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFVWSPQ*QLQISE
Trigger: TTCAGAAATCTGGAGCTGGCACTGTGGAGACCACAC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGACTCTGTTTAGACTaGTCTGCCATTACTAACATG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGLCLD*SAITNM
Trigger: CATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAAGGAATTCCATGCTaGACAGCAGCAGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKGIPC*TAADFG
Trigger: CCCGAAGTCTGCTGCTGTGCAGCATGGAATTCCTTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGTGTGTTTATTCACCTaGAGGGACTCCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFVCLFT*RDSGAH
Trigger: ATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACAC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAGAGAGGTCACTGTCTaGCCACCTGCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVREVTV*PPALVM
Trigger: CATTACTAAGGCAGGTGGGCAGACAGTGACCTCTCT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTTTACCCAGTAATGTaGGGCATGGTGGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGFYPVM*GMVGEF
Trigger: AAATTCACCCACCATGCCGCACATTACTGGGTAAAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTGTTCCCTGCTGCCCTaGTTTTACCCAGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFCSLLP*FYPVMC
Trigger: GCACATTACTGGGTAAAAGCAGGGCAGCAGGGAACA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCCGACATTTGCTTGTTaGGCCATTCTCTCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFPTFAC*AILSLE
Trigger: TTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTATGCCGGCTGAGAGCTaGTTTCCAGGTAATAATCCA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAMPAES*FPGNNP
Trigger: TGGATTATTACCTGGAAACCAGCTCTCAGCCGGCAT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGGATGGATAAACGAGTaGCGGCTTTGCCCACATATT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAGWINE*RLCPHI
Trigger: AATATGTGGGCAAAGCCGCCACTCGTTTATCCATCC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCCAGTAACGAGAGGATaGATAAACGAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFPVTRG*INEWRL
Trigger: AAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAAGTACATCAGCAGTGGGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: IDGLQRVAWEVNKVHQQWESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...CCACTGCTGATGTACTTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VMRTQKGDEVARVHSIKAHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CCA 90 bp GTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAACATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VIPQTIDGLQRVAWEVNKHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...TTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAAGAGTAGCTTGTGGTaGTTCAGTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSKSSLW*FSYQPC
Trigger: ACACGGCTGATAACTGAACCACCACAAGCTACTCTT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCACTCTCGTCGGAGGTaGAATTTTACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFHSRRR*NFTRTG
Trigger: CCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACATCTGGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATTTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: TSGCPSLVTSTDLSWQHYLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...ATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCCAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGTGTGGGGGTTTCTCTaGGGTAGAAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKVWGFL*GRKLAA
Trigger: AGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACAC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGGTTCAGGGGAATCTTaGCTTCCACACCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFGSGES*LPHPSL
Trigger: AAGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTTTGCAGAAACTCTTTaGACCTTCAGAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQFAETL*TFRAFL
Trigger: CAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCGCAACCCTAATGGCCTaGGAAATGATGGTCACATAC +
Preference number: 4 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTATLMA*EMMVTY
Trigger: GTATGTGACCATCATTTCCCAGGCCATTAGGGTTGC...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CCA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTCCTGAAAGTTGGAATTaGTATGAAAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSPESWN*YEKAAP
Trigger: AGGGGCAGCTTTTTCATACCAATTCCAACTTTCAGG...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCTTCTCAGAACAGTTTaGACTGTTTCCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSLLRTV*TVSPTM
Trigger: CATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAACACTGTAAGAGGTaGGGAAAGGGAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKHCKR*GKGGKG
Trigger: ACCCTTCCCTCCCTTTCCCCACCTCTTACAGTGTTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp CGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTTCTTCAAGTGGTATGC +
Preference number: 4 (lower is better)
Translates to: REKVSLITQNFC*LFGSFLLQVVC
Trigger: GCATACCACTTGAAGAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATGAGACTCACCTTTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAATGGCTGCAGTCTTATaGCATGACCCAGTAACGAGA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVMAAVL*HDPVTR
Trigger: TCTCGTTACTGGGTCATGTCATAAGACTGCAGCCAT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTACAAGGACTGGGAGTaGAGATACTGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFYKDWE*RYWSPK
Trigger: CTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATCCCTACCATGGAATCTaGGCACCCGTCATTACAACA +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHPYHGI*APVITT
Trigger: TGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGG...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTCTCATTGTAGTCCATaGTATGTAGCTGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSSHCSP*YVAVQH
Trigger: GTGTTGGACAGCTACATATCATGGACTACAATGAGA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGAAACAGGAAAGCTTTaGAACGTGCATTCACACCTC +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFETGKL*NVHSHL
Trigger: GAGGTGTGAATGCACGTTTCAAAGCTTTCCTGTTTC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAGTTGGAATTGGTATaGAAAAGCTGCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKLELV*KSCPSS
Trigger: AGAAGAGGGGCAGCTTTTTCATACCAATTCCAACTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTTCAGGAGCACTTGTTaGGTTTGGATTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFFRSTC*VWILCH
Trigger: GTGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCCTTTGGACAAAGCTaGATTAAATGTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSFGQS*IKCVVS
Trigger: TGACACCACACATTTAATTCAGCTTTGTCCAAAGGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: QESFETCIHTSCSVPTICKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: ICAIIADANAVGRANDSLKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR GCA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: CLNRFSAGIARVTESLTVHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCAAGAGGCATTTCAATaGCAGATCCAAAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDQEAFQ*QIQKPF
Trigger: GAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCAGACTTACCTGCAATaGAACAAACTACCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDQTYLQ*NKLPGL
Trigger: TAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGAAGCTTATCAGAACTaGCAAAAGAATGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFEAYQN*QKNASM
Trigger: CATACTTGCATTCTTTTGGCAGTTCTGATAAGCTTC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCAGAGCCTTTCTGCTaGAGTGTCACATATAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASEPFC*SVTYKL
Trigger: CAGCTTATATGTGACACTGCAGCAGAAAGGCTCTGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGGAAAAGGCTTTAAGTaGCTGGTATCTTGTTCTATG +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQGKGFK*LVSCSM
Trigger: CATAGAACAAGATACCAGGCACTTAAAGCCTTTTCC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATTTAAAGGAATTCCATaGTGCACAGCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLFKGIP*CTAADF
Trigger: GAAGTCTGCTGCTGTGCAGCATGGAATTCCTTTAAA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTAACTATGTGTGCTGTTaGAAATGGGGACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPNYVCC*KWGRPK
Trigger: CTTGGGCCGTCCCCATTTGCAACAGCACACATAGTT...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTACCAGAAACTATGTGTaGTGTTGCAAATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFTRNYV*CCKWGR
Trigger: CCGTCCCCATTTGCAACAGCACACATAGTTTCTGGT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGATCCAGAGAGATTTTaGCACACTCGATCACAACAT +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSDPERF*HTRSQH
Trigger: ATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCCAAAGAGTAGCTTGTaGTGGTTCAGTTATCAGCCG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFPKSSL*WFSYQP
Trigger: CGGCTGATAACTGAACCACCACAAGCTACTCTTTGG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCACTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLALSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTATGATGGGCTGTCTTTaGCAATGCCACCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFMMGCL*QCHLKK
Trigger: CTTTTTGAGGTGGCATTGCCAAAGACAGCCCATCAT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCGACACACCTTGTTGTTaGCCTTCTTCAGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTDTPCC*PSSVLS
Trigger: GGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTC...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HELALRPWKQESFETCIHFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAGCTGTCCTCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVSCPLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGAGGACAGCT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAAGGCTTTAAGTGCCTaGTATCTTGTTCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSKALSA*YLVLWH
Trigger: GTGCCATAGAACAAGATACCAGGCACTTAAAGCCTT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCACCAAGCTGCTTAATTaGTTTCAAGGTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSTKLLN*FQGRLC
Trigger: GCAGAGTCTACCTTGAAACCAATTAAGCAGCTTGGT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTACCCATAGTGATTTCTaGATGGAGGCCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFTHSDF*MEAIQS
Trigger: GGATTGGATGGCCTCCATCCAGAAATCACTATGGGT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGAGTCTGAGCCTCTGTaGTCTCAGAGATCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFESEPL*SQRSFH
Trigger: ATGAAAGGATCTCTGAGACCACAGAGGCTCAGACTC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACACTTCAGTTCTGCTaGCTACATGAAACGCATACC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATLQFC*LHETHT
Trigger: GGTATGCGTTTCATGTAGCCAGCAGAACTGAAGTGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LDCSAITNMESVMTSAPWLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATCGAGGTTTATATCCATaGCCAGTGTTCAGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: YQLYQRLYCKGVTDQVGHRGLYP*PVFSLN
Trigger: ATTTAAGCTGAACACTGGCCATGGATATAAACCTCG...ATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp TACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATAAAGTACATCAGCAGTaGCAAAGGAATGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: YQLYQRLYCKGVTDQVGHKVHQQ*QRNAKS
Trigger: TGACTTAGCATTCCTTTGCCACTGCTGATGTACTTT...ATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CCA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATATGGTACTGCCATCCTaGAACAAATACTATTGGATA +
Preference number: 4 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDMVLPS*NKYYWI
Trigger: TATCCAATAGTATTTGTTCCAGGATGGCAGTACCAT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR CAA 72 bp CGGTTCTTTCCTTCTTCAAGTGGTATGCTCTACTATTaGGTAGAAATTCACATTGGCTTGTCACAGCACACT +
Preference number: 4 (lower is better)
Translates to: RFFPSSSGMLYY*VEIHIGLSQHT
Trigger: AGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAGAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
3UTR CAA 72 bp AACATCTTCAGACTGGATACATTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCATGTACCCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NIFRLDTFFQYL*RVGFKACTLES
Trigger: ACTCTCCAGGGTACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGAAGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp GTCAGAATTCTATCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VRILSGIIRLLKVRLASERQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...CTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGATAGAATTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTATTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVFTVRV*QIRWDI
Trigger: AATGTCCCACCTGATCTGTCACACCCTTACAGTAAA...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGACCGACTCACTGTTTaGGAGCTTTTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKDRLTV*ELLGNL
Trigger: CAGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCTAATACTCCACATCTaGCAATTCAGTACCAACTGC +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFLILHI*QFSTNC
Trigger: GCAGTTGGTACTGAATTGTCAGATGTGGAGTATTAG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSATKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATAGGTATACTGATTTaGGTCACTCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFIGILI*VTPHQA
Trigger: TGCCTGGTGTGGAGTGACTCAAATCAGTATACCTAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDDSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAAGTACATCAGCAGTGGCTTAAAAGTGACTCCTaGAATGAGCAGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: IDGLQRVAWEVNKVHQQWLKSDS*NEQCEI
Trigger: AATTTCACACTGCTCATTTCAGGAGTCACTTTTAAG...CCACTGCTGATGTACTTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTAGAAGGCAAAAGAGGTaGTTGAGAGAGCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFRRQKR*LRELML
Trigger: AAGCATAAGCTCTCTCAAGCACCTCTTTTGCCTTCT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAAAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: VIPQTIDGLQRVAWEVNKKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...TTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp TCAAGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACAAGAAATCAAGAAGATaGTGTTTCCCAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: SRRCCFPDCGIIGSMVINKKSRR*CFPDCG
Trigger: TCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTT...GTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPSSRQT*WVKATC
Trigger: ACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGA...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKMFLQS*CFDHLA
Trigger: CGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACAT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSALACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTTTGTGGTATCTGAGTaGTTGTTCTGCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAFVVSE*LFCSCS
Trigger: GGAACAACTGCAGAACAAGCACTCAGATACCACAAA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAACATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR GCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTCTGTGCCAACAATATaGAAGTTAACACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLSVPTI*KLTLID
Trigger: GTCAATCAGTGTTAACTTGCATATTGTTGGCACAGA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTAATTTGGCCTCATATTaGACAGGTTCAAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSANLASY*TGSKDA
Trigger: TGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGGTCACATACACTTTaGAGAAACTCTTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDWSHTL*RNSLDL
Trigger: AAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAGCACACTTCAGTTCTaGTGGCTACATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVSTLQF*WLHETH
Trigger: ATGCGTTTCATGTAGCCAGCAGAACTGAAGTGTGCT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCTTCCTAGTGCAAAATaGGTGGCTGCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFLPSAK*VAASFI
Trigger: TATGAAAGAGGCAGCCACGCATTTTGCACTAGGAAG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGAATCATTGGTAGCATaGTTATCAACACCAAGACGC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAESLVA*LSTPRR
Trigger: GCGTCTTGGTGTTGATAACCATGCTACCAATGATTC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCACATGCTCCATCATTaGCTTGACCACTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAHMLHH*LDHFFK
Trigger: TTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATCCAATGGTACTGCCATCCTGGAACAAATACTATTGGATATTTTCATGTCTCTCCAGTTCATGGTCCTTaGATCCAGTCACTAATTCCG +
Preference number: 4 (lower is better)
Translates to: IQWYCHPGTNTIGYFHVSPVHGP*IQSLIP
Trigger: CGGAATTAGTGACTGGATCCAAGGACCATGAACTGG...AGAGACATGAAAATATCCAATAGTATTTGTTCCAGGATGGCAGTACCATTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCATATGAGGCTTCTGTaGGATCCAGAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFHMRLL*DPERFW
Trigger: CCAAAATCTCTCTGGATCCCACAGAAGCCTCATATG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACCACAAACCATAGATaGGCTCCAAAGAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTTNHR*APKSSL
Trigger: CAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATTTCCAGGAGAAGTTaGAGGAGTGGTCATACCACA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFISRRS*RSGHTT
Trigger: TGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTTCTACTTCCTTTGTaGTATCTGAGTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFLLPL*YLSACS
Trigger: AGAACAAGCACTCAGATACCACAAAGGAAGTAGAAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATTGGTCTCACCGTTGTaGCCAGATGCCTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKLVSPL*PDASSL
Trigger: CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTTTCCTTCTTCAAGTaGTATGCTCTACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLSFFK*YALLFG
Trigger: ACCAAATAGTAGAGCATACCACTTGAAGAAGGAAAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: SHLLVLSARKGESHYAELCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATAAGAGTTACCCTTCTTaGCAGACACAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: LQLYQRLYCKGVTDQVGHKSYPS*QTQKSI
Trigger: AATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTT...ATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642344.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCTCTTGCCTGGAGTTTaGCATCCTCTAGATATTTCT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFLLPGV*HPLDIS
Trigger: AGAAATATCTAGAGGATGTCAAACTCCAGGCAAGAG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTACATATAAGCTGACATaGACAAGAGGCGTATGCACA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFTYKLT*TRGVCT
Trigger: TGTGCATACGCCTCTTGTTCATGTCAGCTTATATGT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: MLLGLRRESLDLLTRADFSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCATATTTATGGCATCTaGTGTGGATTGTTGACATGC +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAHIYGI*CGLLTC
Trigger: GCATGTCAACAATCCACATCAGATGCCATAAATATG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGACAGCAAACTCTTTTaGTTCCAATTCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSADSKLF*FQFPFT
Trigger: AGTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp AGCAGTGTGAAATTTTCCCAACCACATACTAAATCTGACCCAAAGGGTCAGCTTCTTAAAAGTGACTCCTaGAATGAGCAGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: SSVKFSQPHTKSDPKGQLLKSDS*NEQCEI
Trigger: AATTTCACACTGCTCATTTCAGGAGTCACTTTTAAG...AAGCTGACCCTTTGGGTCAGATTTAGTATGTGGTTGGGAAAATTTCACACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR TCA 90 bp TCTCCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCTGGTACTGCCATCCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPGFLSYCNENAKRRRSCWYCHP*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGGATGGCAGTACCA...GCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644997.1
CDS-3UTR GCA 90 bp TTAATAAAGTACATCAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LIKYISSGKGMLSHPRGLYFSFQ*CQPGVF
Trigger: AAAGACACCAGGTTGACAGCACTGGAAACTGAAGTA...TAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTGATGTACTTTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR GCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATGGCTGTCTTTGGCAATaGCACCTCAAAAAGATGATC +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHGCLWQ*HLKKMI
Trigger: GATCATCTTTTTGAGGTGGCATTGCCAAAGACAGCC...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGATGCCTCTTCATTGTaGCCTACCATGGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKDASSL*PTMESE
Trigger: CTCAGATTCCATGGTAGGGCACAATGAAGAGGCATC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGAAAGCTTTGAAACGTaGATTCACACCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFESFET*IHTSCS
Trigger: AGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAAAAGACAACCAGCTTTaGAGGCTATGTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKKDNQL*RLCPPG
Trigger: TCCAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATCAAGTGCAATCAATaGCTTGGGATCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFIKCNQ*LGIFAA
Trigger: TGCTGCAAAGATCCCAAGGCATTGATTGCACTTGAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: SFETCIHTSCSVPTICKLKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATAAGCCAAAGTACTTaGTACACAGAGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFISQST*YTEQHH
Trigger: ATGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCCAATGGTACTGCCATCCTGGAACAAATACTATTGGATATTTTCATGTCTCTGCTTATGCTTCCAAGATaGCTGCAGTCTTATGACATG +
Preference number: 4 (lower is better)
Translates to: SNGTAILEQILLDIFMSLLMLPR*LQSYDM
Trigger: CATGTCATAAGACTGCAGCCATCTTGGAAGCATAAG...CAGAGACATGAAAATATCCAATAGTATTTGTTCCAGGATGGCAGTACCATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CCA 90 bp TCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATCTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SYCNENAKRRRSCKGTFHLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...ATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATGTCTGATCTGGCTGTaGAGCTTGGTTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKCLIWL*SLVTIV
Trigger: CACTATGGTAACCAAGCTCCACAGCCAGATCAGACA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATAAAGGTCCATTCCAATaGTTAAACCAGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDKGPFQ*LNQPTY
Trigger: ATAAGTAGGCTGGTTTAACCATTGGAATGGACCTTT...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTTATGGCATCTGATGTaGATTGTTGACATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLWHLM*IVDMLL
Trigger: TAAAAGCATGTCAACAATCCACATCAGATGCCATAA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGAGTTACCCTTCTTaGCAGACACAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTKSYPS*QTQKSI
Trigger: AATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTT...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR TCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACGTCAGTGTCCATCTTaGGACATTTTAGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVRQCPS*DILVKK
Trigger: CTTCTTTACTAAAATGTCTCAAGATGGACACTGACG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTCTGATGTGGATTGTTaGCATGCTTTTAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFSDVDC*HAFRIE
Trigger: CTCAATCCTAAAAGCATGTCAACAATCCACATCAGA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATCTAGCTTGTTCTTTCTaGAGACTAACCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHLACSF*RLTFHI
Trigger: GATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAG...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTCATCTTTCTCCAACCTaGCATATAAATCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFHLSPT*HINLRS
Trigger: AGATCTTAGATTTATATGGCAGGTTGGAGAAAGATG...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATGCAAAATGCGTGGCTaGCTCTTTCATAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKCKMRG*LFHKPK
Trigger: CTTTGGCTTATGAAAGAGGCAGCCACGCATTTTGCA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATATCCTGTCCAAGAGGTaGAGAATTGAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHILSKR*RIEVLF
Trigger: AAAGAGAACCTCAATTCTGCACCTCTTGGACAGGAT...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTGAAAGTTACCTTGCCTaGAGTTTGACATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPESYLA*SLTSSR
Trigger: TCTAGAGGATGTCAAACTCCAGGCAAGGTAACTTTC...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
3UTR CAA 72 bp TGTCCATCTCTAGGGATAATAAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAATTTGCATGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CPSLGIIKELPF*ADTKINLHGAV
Trigger: TACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTTTATTATCCCTAGAGATGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
3UTR CAA 72 bp AAAGCCTTTCCTGATGAAAGTTACCTTGCCTGGAGTTaGACATCCTCTAGATATTTCTTCTGTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KAFPDESYLAWS*TSSRYFFCSKR
Trigger: TCTTTTGGAACAGAAGAAATATCTAGAGGATGTCAAACTCCAGGCAAGGTAACTTTCATCAGGAAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAACCAAACCTAACTACTaGCTCTGGAGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKTKPNY*LWSSLQ
Trigger: TTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGGT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAATCCTTTCATCCCCATaGCCATTTTATACATCCTCC +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKILSSP*PFYTSS
Trigger: GGAGGATGTATAAAATGGTCATGGGGATGAAAGGAT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAAAAAGGAGACGAAGTTaGAAGGGTACATTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVKRRRS*KGTFHK
Trigger: TTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTT...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTAAAACCAGACTTACCTaGAATGCAACAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPKTRLT*NATNYL
Trigger: CAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTTTT...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR GCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACGCAGAACTTTTGTTTaGTCTTCGGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKRRTFV*SSVLSF
Trigger: GAAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTAAAAGCTTAATCAAGTaGAATCAATGCCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFKSLIK*NQCLGI
Trigger: GATCCCAAGGCATTGATTGCACTTGATTAAGCTTTT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTTCAACTGATCTTTCATaGCAGCATTATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPSTDLS*QHYVPP
Trigger: TGGAGGAACATAATGCTGCCATGAAAGATCAGTTGA...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAATAGTGATTTCTGGATaGAGGCCATCCAATCCCAAT +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKIVISG*RPSNPN
Trigger: ATTGGGATTGGATGGCCTCCATCCAGAAATCACTAT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSACSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR TCA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATTCTTGTAACTTCAACTaGTCTTTCATGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHSCNFN*SFMAAL
Trigger: TAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGA...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR GCA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCAAAGTTCTATCAGATaGAGATCTGTGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFQSSIR*RSVCLF
Trigger: GAATAAACACACAGATCTGCATCTGATAGAACTTTG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR GCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTTTAAACTGCAAGTTTaGCACACATGGTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFFKLQV*HTWFIH
Trigger: ATGAATGAACCATGTGTGGCAAACTTGCAGTTTAAA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACTGTCATTCAGAAGATaGTGTTGTCTGTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKLSFRR*CCLCRH
Trigger: ATGTCTACACAGACAACACCATCTTCTGAATGACAG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTAGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGAAACTAGACTGTATTaGGTTTTAAGCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFETRLY*VLSFPL
Trigger: CAAAGGAAAGCTTAAAACCCAATACAGTCTAGTTTC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CCA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATGCAGTTCATATTTATaGCATCTGATGTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKCSSYL*HLMWIV
Trigger: AACAATCCACATCAGATGCCATAAATATGAACTGCA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS TCA 90 bp CCTACAGGGCGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTaGAAGGGCCAAGGCCGACGGCGGCCTCCGCCACGAAAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: PTGRRHLGRTAPPPS*KGQGRRRPPPRKRV
Trigger: GACTCTTTTTCGTGGCGGAGGCCGCCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642249.1
ENST00000642854.1
ENST00000644097.1
CDS-3UTR CAA 90 bp CCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGGGTCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PIVVSHRLLNGPALWCGGLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...ACCCCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS CCA 90 bp GCTGTTTACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGACG +
Preference number: 5 (lower is better)
Translates to: AVYLTVPPAYRAPPS*TYSTSPVVKGPRPT
Trigger: CGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGGTAAACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642249.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFALPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFADSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS CCA 90 bp CAGCTGTCACGTCGTCCCGCACACCCAGCATGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACATTTGCTTGTTGGGCCATTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: QLSRRPAHPAWGSPA*QEAPRHLLVGPFSR
Trigger: GCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGGACGACGTGACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000440111.6
ENST00000475903.6
ENST00000490179.3
ENST00000545250.5
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS TCA 90 bp CGCTCGAAGGCGCTGTGCTGGCTCCAGGACGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCCACTACCAAACCACCGTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RSKALCWLQDVCYRF*RFFIGATTKPPSPP
Trigger: GGGAGGAGACGGTGGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCACAGCGCCTTCGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475903.6
CDS-3UTR CAA 90 bp ATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: IIRGRLPASKAHSRRRWNNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...ATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFAKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCGGGTCTTCGCTCTGCCCAAACCCTCCTCCAGCCTGTGCAGGCCTCCTCCCTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GRVFALPKPSSSLCRPPPFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...GGGAGGAGGCCTGCACAGGCTGGAGGAGGGTTTGGGCAGAGCGAAGACCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAGAGTCAAAGCCTCCTCGAGGAACCACAGGCTCTGCCTCTGCTGTGGTGATCAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GESKPPRGTTGSASAVVINLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...GATCACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: AAALITLRRSRLFRRACCGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GETGEGHLGSGESWLPHPVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAACAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646391.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644097.1
ENST00000646625.1
CDS GCA 90 bp AAGGAGGAGAGCTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGCACTTCCATTGGGGAGGTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: KEESLFSSLLCASAP*CISLSSTSIGEVEG
Trigger: GCCCTCTACCTCCCCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGCTCTCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQALVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: GLGVLVSPLWPDASSLCPLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...AGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQALSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGCCTGCCCTCTGGTGTGGGGGTTTCTCTGGGGTAGAAAGCTCGCTGCTGCTGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: GPALWCGGFSGVESSLLLSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CAGCAGCAGCGAGCTTTCTACCCCAGAGAAACCCCCACACCAGAGGGCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQARVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAANLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACCTCAAAAAGATGATCATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PPQKDDHTGEAARFQSPLSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...GAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTATGATCATCTTTTTGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PGGVKCARSHPNDRVGLESRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFALIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTCGCTTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PQEVGGTPSHQGPGRVFASFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...AGCGAAGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCTCCCATAGTCGTCTCCCACCGACTGCTGAATGGGCCTGCCCTCTGGTGTGGGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: SPIVVSHRLLNGPALWCGPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...CCCACACCAGAGGGCAGGCCCATTCAGCAGTCGGTGGGAGACGACTATGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: NLTEQQLSVTHLVVGLLQLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...CTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: QACPGRSVKAQGSRWRPERFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: SRRSWRSGHTTNHRWAPKQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...CTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403810.6
ENST00000646391.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642646.1
ENST00000645150.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642646.1
ENST00000645150.1
CDS TCA 90 bp GCAGTGCAGAAGAGTGGAAAGAGCCTGGCTCCTCGATGCTGTCCCTaGATGGCCAACTTGACCAACCTGGAACTCACCTGCCTCACAACC +
Preference number: 5 (lower is better)
Translates to: AVQKSGKSLAPRCCP*MANLTNLELTCLTT
Trigger: GGTTGTGAGGCAGGTGAGTTCCAGGTTGGTCAAGTTGGCCATTCAGGGACAGCATCGAGGAGCCAGGCTCTTTCCACTCTTCTGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACTGCCCCGGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGAACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: TAPGAAGPGGLGLTVVARTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...TCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCCGGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: LGSEPTVVGMLADASPIVHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FLSLIPALCGLQLSSCLEYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGCGCTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: GRCWAWGSWSHRCGQMPLMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...AAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CAA 90 bp CTGCTGGGCCTGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: LLGLGVLVSPLWPDASSLKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...CAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp GTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGAGCTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: VMLQLSDLAVELGYHSVTSLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGCT...CGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS GCA 90 bp AGCCCCAGAGCCTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACCACCGTCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SPRACSSDNWYFSFQ*CQPGVFHGHHRLLP
Trigger: GGGGAGGAGACGGTGGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGGCTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490179.3
CDS GCA 90 bp TCATCTGAAGGAGGAGAGCTTGTTCAGCTCCTTGCTGTGCGCGTCTaGTCCCTGCTGTATCAGTCTGTCCAGCACTTCCATTGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SSEGGELVQLLAVRV*SLLYQSVQHFHWGG
Trigger: ACCTCCCCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGCTCTCCTCCTTCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS GCA 90 bp GTCGTGAGGACCAAAGGAGATAATGACTGCCAAGCACTTTCACAGTaGCCACCGTCTCCTCCCCCTCAGCTGTTTACCTCACAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: VVRTKGDNDCQALSQ*PPSPPPQLFTSQSL
Trigger: GAGGGACTGTGAGGTAAACAGCTGAGGGGGAGGAGACGGTGGGCACTGTGAAAGTGCTTGGCAGTCATTATCTCCTTTGGTCCTCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS GCA 90 bp TGGCTGCCTCTTCTCTTTGTCGTGAGGACCAAAGGAGATAATGACTaGCAAGCACTTTCACAGTGCCCACCGTCTCCTCCCCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: WLPLLFVVRTKGDND*QALSQCPPSPPPQL
Trigger: CAGCTGAGGGGGAGGAGACGGTGGGCACTGTGAAAGTGCTTGGCAGTCATTATCTCCTTTGGTCCTCACGACAAAGAGAAGAGGCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS CCA 90 bp CAACTGGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: QLVLQFPVLSTWCLS*SLTVPPAYRAPPSW
Trigger: CCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000642811.1
ENST00000642854.1
ENST00000643691.1
ENST00000644097.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: SATWPGFFRHHDDRRPKMLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...CATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: PGGVKCARSHPNDRVGLELVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000644997.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: GETGEGHLGSGESWLPHPGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCTGGAGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: FLSLIPALCGLQLSSCLEHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CTCCAGGCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: RAAALITLRRSRLFRRACNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCACTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGTATCCGCAGGAGGTGGGCGGCACCCCATCTCACCAAGGTCCTGGCCGGGTCTTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: SIRRRWAAPHLTKVLAGSFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...AGACCCGGCCAGGACCTTGGTGAGATGGGGTGCCGCCCACCTCCTGCGGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000644097.1
CDS TCA 90 bp ATCAAGCCATTCTCTATGCCATGCGGGAGACATACTGTCTGGGTCTaGAACGCTTTCCCCACTAAGGTCTGGCTCCCGAGCCCTGGCATA +
Preference number: 5 (lower is better)
Translates to: IKPFSMPCGRHTVWV*NAFPTKVWLPSPGI
Trigger: TATGCCAGGGCTCGGGAGCCAGACCTTAGTGGGGAAAGCGTTTCAGACCCAGACAGTATGTCTCCCGCATGGCATAGAGAATGGCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 90 bp TGTCTGCCTGTCATATCTGTGCCTGTGGCACACACCTGGCAACCATaGGTGCAGCTAGCTGGAAGACAAGGTCTGCAGGATAAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: CLPVISVPVAHTWQP*VQLAGRQGLQDKQG
Trigger: GCCTTGCTTATCCTGCAGACCTTGTCTTCCAGCTAGCTGCACTCATGGTTGCCAGGTGTGTGCCACAGGCACAGATATGACAGGCAGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 90 bp GTAACTTCAACTGATCATGGCAGCATTATGTTCCTCCAGAGCTGCTaGTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: VTSTDHGSIMFLQSC*FDHLAEEPPVPEGM
Trigger: CATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGATCAGTTGAAGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS GCA 90 bp CTTGTAACTTCAACTGATCATGGCAGCATTATGTTCCTCCAGAGCTaGTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LVTSTDHGSIMFLQS*CFDHLAEEPPVPEG
Trigger: GCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGATCAGTTGAAGTTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: SPLWPDASSLCPTMESEHPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPREAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCAGGGCAGGTCTATGGGAGTAAAGGCTTGCTTTGGTGTGTCAGGCCCAAGCTTCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGQVYGSKGLLWCVRPKLLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...AAGCTTGGGCCTGACACACCAAAGCAAGCCTTTACTCCCATAGACCTGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: QACPGRSVKAQGSRWRPEPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASILCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCAGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCCAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTQGAAI*DVQHLP
Trigger: GGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTG...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642854.1
ENST00000646391.1
CDS CCA 90 bp CAACTGGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACCACCGTCTCCTCCCCCTCAGCTGTTTACCTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: QLVLQFPVLSTWCLS*SPPSPPPQLFTSQS
Trigger: GGACTGTGAGGTAAACAGCTGAGGGGGAGGAGACGGTGGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000490179.3
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000643072.1
ENST00000643583.1
ENST00000644255.1
ENST00000645904.1
ENST00000646391.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CCA 90 bp GGTCCTCCAAATGCAGGCAGCCCCAGAGCCTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: GPPNAGSPRACSSDN*YFSFQCCQPGVFHG
Trigger: ACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGGCTCTGGGGCTGCCTGCATTTGGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490179.3
CDS CCA 90 bp ACTCAGCTGCATCACCCGTTTTATGAACTGGGAAACAGGGCCCCATaGAGAGGCAGCTACTCAAGGTCCCAAACAGCACAAGGACTCCTT +
Preference number: 5 (lower is better)
Translates to: TQLHHPFYELGNRAP*RGSYSRSQTAQGLL
Trigger: AAGGAGTCCTTGTGCTGTTTGGGACCTTGAGTAGCTGCCTCTCCATGGGGCCCTGTTTCCCAGTTCATAAAACGGGTGATGCAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAEPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: RGCWGSQRSSFSTSCTKDLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...GTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCACTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQACVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSAVSMGNSESEVAALAYRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...ATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTCCAGTCGACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VQSTDLLGKGNLFSSLLCYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQAPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: TGEAARFQSPLSSEVEFYPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKANLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMESRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: EPTAACSRTPSAAGPTHCIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...ACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTTGCCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: YPFLSLIPALCGLQLSSCPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...GCAAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTCTTTCCGATAGGCGGCTTTCATCATTTCTACTTCCTTTGTGGTATCTGAGTCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ALSDRRLSSFLLPLWYLSLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...ACTCAGATACCACAAAGGAAGTAGAAATGATGAAAGCCGCCTATCGGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGGTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LVVEFLSVMLQLSDLAVERFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...CTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAAGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: QCDTPCCWPSSVLSAAPQDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...TTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASIEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAAHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGCCAAAGCAGAGTTTaGGAACCACCCAGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFCQSRV*EPPRGR
Trigger: CCGACCCCTGGGTGGTTCCAAAACTCTGCTTTGGCA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTGCCAAAGCAGAGTTTaGGAACCACCCAGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLCQSRV*EPPRGR
Trigger: CCGACCCCTGGGTGGTTCCAAAACTCTGCTTTGGCA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTGCTGATGCAGGAGGATaGCATGAGTCTGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVADAGG*HESGRS
Trigger: TGACCTCCCAGACTCATGCAATCCTCCTGCATCAGC...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS TCA 90 bp CCACTAAGGTCTGGCTCCCGAGCCCTGGCATACCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: PLRSGSRALAYLCGI*VLVLQLFQIELVDL
Trigger: GAGGTCAACGAGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCACAAAGGTATGCCAGGGCTCGGGAGCCAGACCTTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 90 bp CCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACCACCGTCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PLPNCSSDNWYFSFQ*CQPGVFHGHHRLLP
Trigger: GGGGAGGAGACGGTGGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000643072.1
ENST00000643583.1
ENST00000644255.1
ENST00000644997.1
ENST00000645904.1
ENST00000646391.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS GCA 90 bp AACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTaGAGGAGAAAAGGTCAAACAGGAAACGTCTGTCAGGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: NTKTPVVRTTTSVSI*RRKGQTGNVCQALA
Trigger: TGCCAGTGCCTGACAGACGTTTCCTGTTTGACCTTTTCTCCTGCAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS GCA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTTGAGAGCTTGTTGTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSPRTNSCLFKNSIC*WTDSLFESLLLAFF
Trigger: GAAGAAGGCCAACAACAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644184.1
ENST00000644882.1
CDS GCA 90 bp TTGACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTGTTTGAGAGCTTGTTGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LTSPRTNSCLFKNSI*CWTDSLFESLLLAF
Trigger: GAAGGCCAACAACAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644184.1
ENST00000644882.1
CDS GCA 90 bp AGATGGCCCAGGCACGTTTCAGCAGCTTTTTCAGGAGCTCTCTTGTaGCTCGGATCTGTTTCTCCCCCTTTCTGTTCCCAGTCATTACAC +
Preference number: 5 (lower is better)
Translates to: RWPRHVSAAFSGALL*LGSVSPPFCSQSLH
Trigger: GTGTAATGACTGGGAACAGAAAGGGGGAGAAACAGATCCGAGGCACAAGAGAGCTCCTGAAAAAGCTGCTGAAACGTGCCTGGGCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp CTTCCTTGGCTCCATGACCTCATCCTGCAGGAATGCATTCTGCCATaGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTGCTCACTTTC +
Preference number: 5 (lower is better)
Translates to: LPWLHDLILQECILP*RRAAISRAHQLLTF
Trigger: GAAAGTGAGCAGTTGATGAGCTCTGCTTATGGCTGCTCTCCTCCATGGCAGAATGCATTCCTGCAGGATGAGGTCATGGAGCCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643362.1
CDS CCA 90 bp GCTTTCCCCACTAAGGTCTGGCTCCCGAGCCCTGGCATACCTTTGTaGTATCTGAGTGCTTGTTCTGCAGTTGTTCCAAATAGAGCTCGT +
Preference number: 5 (lower is better)
Translates to: AFPTKVWLPSPGIPL*YLSACSAVVPNRAR
Trigger: ACGAGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCACAAAGGTATGCCAGGGCTCGGGAGCCAGACCTTAGTGGGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCACCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTAGAAGTAGCACACCCATAGCTATTCTGTGTGTCAGCATAAGGGCTGGTGGTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GRSSTPIAILCVSIRAGGLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ACCACCAGCCCTTATGCTGACACACAGAATAGCTATGGGTGTGCTACTTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTCTAGGCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: INTKTPVVRTTTSVSISRLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...CCTAGAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CAA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAELVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCAAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: QFYPQLRNHVPAVLQLRLKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...CAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LPLRTWETVSVKGRVKASRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: LSDLAVELGYHSVTLLLESSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGAGGAGAGGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: VKCARSHPNDRVGLEEERSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CCTCTCCTCCTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647078.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RSWRSGHTTNHRWAPKSSNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...GCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GYHSVTLLLELIVSSLFFAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...AAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGTCAAAGAAAGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: WPGFFRHHDDRRPKMSKKAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...TTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGGGAAGTGAGCCCACAGTGGTGGGGATGCTGGCAGACGCTTCTCCCATAGTCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: LGSEPTVVGMLADASPIVLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GACTATGGGAGAAGCGTCTGCCAGCATCCCCACCACTGTGGGCTCACTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DRLPPRGLVSSGTMMTDGVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASISFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGCTTGTCCAGGGAGGAGTGTAAAGGCTCAGGGTTCACGCTGGCGCCCTGAGTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QACPGRSVKAQGSRWRPESFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...CTCAGGGCGCCAGCGTGAACCCTGAGCCTTTACACTCCTCCCTGGACAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GCPLPKPTLVGGGILQGLFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...CAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTCTGGGCCTGGGGGTCTaGGTCTCACCGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: KEGGLSWPGEIPVPKSVFLGLGV*VSPLWP
Trigger: TGGCCACAACGGTGAGACCAAGACCCCCAGGCCCAG...AAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: VELGYHSVTLLLELIVSSRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCCACTCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: PTLVGGGILQGLGVKILVRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...GACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGAGCTGCTGCTTTGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RAAALITLRRSRLFRRACTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASISSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASISHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGGTATTTGTGCCATCATaGCAGATGCCAATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRVFVPS*QMPMQW
Trigger: CCACTGCATTGGCATCTGCAATGATGGCACAAATAC...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTAC +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRSEGSS*GPLPNY
Trigger: GTAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR CAA 90 bp ATACGGGGGAGGCTGCCCGCTTCCAAAGCCCACTCTCGTCGGAGGTGGAATTTTCCAAGAGGTGCAGAATaGAGGTTCTCTTTAAAGACA +
Preference number: 5 (lower is better)
Translates to: IRGRLPASKAHSRRRWNFPRGAE*RFSLKT
Trigger: TGTCTTTAAAGAGAACCTCAATTCTGCACCTCTTGG...AAAATTCCACCTCCGACGAGAGTGGGCTTTGGAAGCGGGCAGCCTCCCCCGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS GCA 90 bp TCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCTGTCCTCTGGAGTTTGACATCCTCT +
Preference number: 5 (lower is better)
Translates to: SPIQTPGLSFSEPHT*SLRPAAVLWSLTSS
Trigger: AGAGGATGTCAAACTCCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644882.1
CDS GCA 90 bp CCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACGTCTCCTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PLPNCSSDNWYFSFQ*CQPGVFHGHVSSPS
Trigger: TGAGGGGGAGGAGACGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643875.1
CDS GCA 90 bp CCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACTGGGAAGGGGCGGAA +
Preference number: 5 (lower is better)
Translates to: PLPNCSSDNWYFSFQ*CQPGVFHGHWEGAE
Trigger: TTCCGCCCCTTCCCAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646440.1
CDS GCA 90 bp TCCAAGAGGTGCTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACTCACAGTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SKRCCSSDNWYFSFQ*CQPGVFHGHSQSLQ
Trigger: CTGGAGGGACTGTGAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGCACCTCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643691.1
CDS CCA 90 bp GTGCTGGCTCCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATTaGGGCCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: VLAPGRVLQVLKVLH*GHYQTVLATTGTSV
Trigger: AACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CCA 90 bp AAATGGCAGTCGGTATTCCACCTGGGAAAGACTAGGCAGTTTGGGTaGCATGCTGCCACATGCCAGTGTCACTCAGAGAGAGGAGAAAAA +
Preference number: 5 (lower is better)
Translates to: KWQSVFHLGKTRQFG*HAATCQCHSERGEK
Trigger: TTTTTCTCCTCTCTCTGAGTGACACTGGCATGTGGCAGCATGCCACCCAAACTGCCTAGTCTTTCCCAGGTGGAATACCGACTGCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644882.1
ENST00000647262.1
CDS-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: CLNRFSAGIARVTESLTVPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: VSQTVESLVAWLSTPRRLPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...CAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTALPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CAACATCAGCCGAGACGTGGAGTAAGGGGTAGAAGTAGCACACCCATAGCTATTCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: QHQPRRGVRGRSSTPIAILSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...AATAGCTATGGGTGTGCTACTTCTACCCCTTACTCCACGTCTCGGCTGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLWWFSYQPCRWGTQSLRRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CCTCAGACTCTGAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTAAAAGCAACTGGTCTCGGAGGGTGCGGATCTCATCTGAAGGAGGAGAGCCTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SKSNWSRRVRISSEGGEPRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AGGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVECSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: VGLTCWVPHKSSAKAEFWHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGATGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: SPRTNSCLFKNSICCWTDNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGACCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CCAGATGCCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PDASSLCPTMESEHPSLQLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...TTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMELGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQESRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCGTACACACTGGCATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: CVHTGMEMDEIDFRHVAWLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CACCCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCAATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: HPSLCPVLSLGSQKGYWSIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...TGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTTCCGCTGAGAACCTGGGAGACTGTCTCGGTAAAAGGGAGAGTCAAAGCCTCCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LPLRTWETVSVKGRVKASVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCCCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: TSPRTNSCLFKNSICCWTPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...GGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGGGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: GLLQFYPQLRNHVPAVLQPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTCCAAAGAGTAGCTTGTGGTGGTTCAGTTATCAGCCGTGTCGATGGGGAACTCCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: LQRVACGGSVISRVDGELPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...GAGTTCCCCATCGACACGGCTGATAACTGAACCACCACAAGCTACTCTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCTCGTCGGAGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SRRRWNFTRTGSEDTGLQVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...TTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCTCCGACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKARFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACAGGAACACGCTCCCCTGGGCACATCGAAGAGTCCCGGACAGGCAAACAAGCCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: TGTRSPGHIEESRTGKQATQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GGCTTGTTTGCCTGTCCGGGACTCTTCGATGTGCCCAGGGGAGCGTGTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASITQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTGGGAAACCTGACTGAGCAGCAGCTCAGTGTGACACACCTTGTTGTTGGCCTTGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LGNLTEQQLSVTHLVVGLEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...AAGGCCAACAACAAGGTGTGTCACACTGAGCTGCTGCTCAGTCAGGTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCATTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: LGLTVVARCLFIVPYHGISRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp CGGGAGCACGTGGGGCAGCCTAGTGGGTATACACAGCCAGCCTTTGCCAGCATTCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: REHVGQPSGYTQPAFASILVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...AATGCTGGCAAAGGCTGGCTGTGTATACCCACTAGGCTGCCCCACGTGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp GCTACAGCTACTCTTCCCTCAGGCGAGCAGATAAGGACTGCAGGACGGCATGGAACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: ATATLPSGEQIRTAGRHGTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...TCCATGCCGTCCTGCAGTCCTTATCTGCTCGCCTGAGGGAAGAGTAGCTGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGGAGACGGGTGAGGGCCATCTAGGTTCAGGGGAATCTTGGCTTCCACACCCAGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: GETGEGHLGSGESWLPHPESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...TGGGTGTGGAAGCCAAGATTCCCCTGAACCTAGATGGCCCTCACCCGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp TACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCACGCCCTGCCACAGGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: YQLPACARLSSWDHALPQESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...CTGTGGCAGGGCGTGGTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCTGCCAAAGCAGAGTTTaGGAACCACCCAGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFCQSRV*EPPRGR
Trigger: CCGACCCCTGGGTGGTTCCAAAACTCTGCTTTGGCA...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTATGCCAAAGCAGAGTTTaGGAACCACCCAGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: ICAIIADANAVGRANDSLCQSRV*EPPRGR
Trigger: CCGACCCCTGGGTGGTTCCAAAACTCTGCTTTGGCA...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTATCAAGAGAGTAGGTTaGACCTGCTGGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFIKRVG*TCWVPH
Trigger: GTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTGCTGATGCAGGAGGATaGCATGAGTCTGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAADAGG*HESGRS
Trigger: TGACCTCCCAGACTCATGCAATCCTCCTGCATCAGC...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp ACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGTATTTGTGCCATCATaGCAGATGCCAATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: TCWVPHKSSAKAEFWNHPVFVPS*QMPMQW
Trigger: CCACTGCATTGGCATCTGCAATGATGGCACAAATAC...TGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGCCCATCCAGTCAACTaGGCGATAGTGTGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLAHPVN*AIVWAN
Trigger: ATTAGCCCACACTATCGCCAAGTTGACTGGATGGGC...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS GCA 90 bp CCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACTCACAGTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PLPNCSSDNWYFSFQ*CQPGVFHGHSQSLQ
Trigger: CTGGAGGGACTGTGAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642811.1
ENST00000642854.1
ENST00000644097.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000646625.1
CDS GCA 90 bp CGAGTGGCGGCTTTGCCCACATATTCGTTAATCCTGTCCAAGAGGTaGTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: RVAALPTYSLILSKR*CSSDNWYFSFQCCQ
Trigger: TTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGCACCTCTTGGACAGGATTAACGAATATGTGGGCAAAGCCGCCACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643691.1
CDS CCA 90 bp CCATCTGCAGGAGAAAAGGTCAAACAGGAAACGTCTGTCAGGCACTaGCACCAGGATCGGCATTGTACAGTACATGAAGAGGCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: PSAGEKVKQETSVRH*HQDRHCTVHEEALN
Trigger: GTTTAGAGCCTCTTCATGTACTGTACAATGCCGATCCTGGTGCCAGTGCCTGACAGACGTTTCCTGTTTGACCTTTTCTCCTGCAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNSEGSS*GPLPNC
Trigger: ACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSEGSS*GPLPNC
Trigger: ACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GGILQGLGVKILVSKEVWLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...CCAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GIIGSMVINTKTPVVRTTEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp AGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: SSGKGMLSHPRGLYPWPVLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...CACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTALSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTAAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAERQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: VVGLLQFYPQLRNHVPAVGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVELFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGGAGATGGACGAGATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: MEMDEIDFRHVAWFLQAPCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...TGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TGGGGTTCCCAGAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: WGSQRSSFSTCSCTKDFTYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...AGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTCTGGGAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LAFFSSIRSSAIMFLQSSNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVEPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAACTTGTTCAGCTCCTaGCTGTGCGCGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRNLFSS*LCASAP
Trigger: GGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGTT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLEVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: EGGLSWPGEIPVPKSVFGIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...CCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAGTCTTTGCCCAGTTCTGTCTTTAGGCTCTCAGAAAGGCTACTGGTCATGCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: PSLCPVLSLGSQKGYWSCGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GCATGACCAGTAGCCTTTCTGAGAGCCTAAAGACAGAACTGGGCAAAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGCTGGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: MLQLSDLAVELGYHSVTLVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...CAGCGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: NSSRSCCSCLIWLWSLVTVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...GGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCATGGAATCGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: LGLTVVARCLFIVPYHGIVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...GATTCCATGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCACCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: PIQTPGLSFSEPHTCSLRPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...CCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: GNSESEVAALAYLTTSAEFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTGTCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: VSGGDPSRLCTLAKQLRQAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GATAGACTTCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: DRLPPRGLVSSGTMMTDGFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...GCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644255.1
ENST00000644997.1
CDS-3UTR CAA 90 bp CCTGGGGGAGTGAAATGTGCACGTAGTCATCCGAATGACAGAGTGGGGCTGGAGGACACAAAAATCAATTaGCATGGTGCTGTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: PGGVKCARSHPNDRVGLEDTKIN*HGAVAD
Trigger: ATCTGCTACAGCACCATGCAAATTGATTTTTGTGTC...CTCCAGCCCCACTCTGTCATTCGGATGACTACGTGCACATTTCACTCCCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000644997.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTCACTGTTTGAGAGCTaGTTGTTGGCCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPSLFES*LLAFFS
Trigger: ACTGAAGAAGGCCAACAACAAGCTCTCAAACAGTGA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644184.1
CDS-3UTR CAA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCATGTGGGCTAATCAGCTaGGGCCACCTAGCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: GKNARPLGIGHFNACLDSCGLIS*GHLACF
Trigger: AAAACAAGCTAGGTGGCCCAAGCTGATTAGCCCACA...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS TCA 90 bp GTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTTGTCATGTGGCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: VESLVAWLSTPRRLL*GQRRQCPSCHVALA
Trigger: TGCAAGAGCCACATGACAAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545250.5
ENST00000643072.1
ENST00000643362.1
ENST00000645129.1
CDS GCA 90 bp CCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGTTTCCAGTaGTGTCAACCTGGTGTCTTTCATGGTCACTTCCTTGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PLPNCSSDNWYFSFQ*CQPGVFHGHFLGSM
Trigger: CATGGAGCCAAGGAAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643362.1
CDS CCA 90 bp ACTTCTGAGCTCAAGCAATCCTCCTATTTCAGCCTTCCAAATAGTTaGCACTGTAGGCATGTGTCACCGTGCCCAGCCCTAGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: TSELKQSSYFSLPNS*HCRHVSPCPALVWF
Trigger: AAACCAAACTAGGGCTGGGCACGGTGACACATGCCTACAGTGCCAACTATTTGGAAGGCTGAAATAGGAGGATTGCTTGAGCTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp CCTATGATATTTCAGCCATTACCTTGTCATGTGGCTCTTGCAAGGTaGTCAGGATGTGCAATGCCGGCTGAGAGCTGGTTTCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: PMIFQPLPCHVALAR*SGCAMPAESWFPGN
Trigger: ATTACCTGGAAACCAGCTCTCAGCCGGCATTGCACATCCTGACCACCTTGCAAGAGCCACATGACAAGGTAATGGCTGAAATATCATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS-3UTR CAA 90 bp TTCCGGATGAATTCGCACATGCTCCATCATTGGCTTGACCACTTCTTCAAAAGTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: FRMNSHMLHHWLDHFFKSLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCATGTGCGAATTCATCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: QWQRNAKSSTRFISMASVEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp AGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RLYCKGVTDQVGHFQEKLEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLERQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: QSCSCSPPASSVIPGSGCRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...ACAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGGGGGTCTTGGTCTCACCGTTGTGGCCAGATGCCTCTTCATTGTGCCCTACCAACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: WGSWSHRCGQMPLHCALPTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...TGGTAGGGCACAATGAAGAGGCATCTGGCCACAACGGTGAGACCAAGACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGCCGTGTCGATGGGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTACAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: SAVSMGNSESEVAALAYLQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...TAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGACACGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTTGTGGTTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: GGVVIPQTIDGLQRVACGSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...ACCACAAGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAATCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLESSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: PGEVGGVVIPQTIDGLQRGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...TCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: MSGKNARPLGIGHFNACLGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKAGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGATTCAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: GKNARPLGIGHFNACLDSAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TGAATCAAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: HLQLYQRLYCKGVTDQVGHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTCCTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCAAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLLELIVSSLFFLQTNLPRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...TGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: NQQLPVQELHLLLDRLTVNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...AACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LLAFFSSIRSSAIMFLQSNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SAIMFLQSSSFVCNSWLWPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...CCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: QESFETCIHTSCSVPTICVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: GLLQFYPQLRNHVPAVLQLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGCGGGTGGAGTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PWIRTHCEVNERGLGRVESFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...CTCCACCCGCCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGTCTTGGTCTCACCGTaGTGGCCAGATGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLAVLVSP*WPDASS
Trigger: TGAAGAGGCATCTGGCCACAACGGTGAGACCAAGAC...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTCCAGTCGACAGACTTGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: VQSTDLLGKGNLFSSLLCMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTGGTTACCATAGTGTCACGATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: VMLQLSDLAVELGYHSVTIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...CGTGACACTATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMESRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKASRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCGAAGAGTCCCGGACAGGCAAACAAGCCACATGGGACAAGGGTCACAGCAGCACTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SKSPGQANKPHGTRVTAALVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...TGCTGCTGTGACCCTTGTCCCATGTGGCTTGTTTGCCTGTCCGGGACTCTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LSVTHLVVGLLQFYPQLRTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...GCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTGGTCTGGGGGTTCTCAGACTCTCAGGGTTTCCACTGAAAGGTCCATTCCAACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GWSGGSQTLRVSTERSIPTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...TGGAATGGACCTTTCAGTGGAAACCCTGAGAGTCTGAGAACCCCCAGACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRDRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGTGACTGCTCCTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CSSSCSSASRVTSPSDCSSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...GGAGCAGTCACTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGTCAGGGAAGAATGCAAGGCCTCTTGGGATAGGACACTTCAATGCCTGCCTTGTATTTGTGCCATCATaGCAGATGCCAATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: MSGKNARPLGIGHFNACLVFVPS*QMPMQW
Trigger: CCACTGCATTGGCATCTGCAATGATGGCACAAATAC...AAGGCAGGCATTGAAGTGTCCTATCCCAAGAGGCCTTGCATTCTTCCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCACGTCAGTGTCCATCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFTSVSI*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGATGGACACTGACGT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545250.5
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGGACCGACTCACTGTTaGAGAGCTTGTTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFGPTHC*RACCWP
Trigger: AGGCCAACAACAAGCTCTCAAACAGTGAGTCGGTCC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644184.1
CDS-3UTR CAA 90 bp GCTCAGTGTGACACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGTACCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: AQCDTPCCWPSSVLSAAPYLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGGTA...CGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGTGTCACACTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS TCA 90 bp GTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTGCAGGAGAAAAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: VESLVAWLSTPRRLL*GQRRQCPSAGEKVK
Trigger: TTTGACCTTTTCTCCTGCAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS TCA 90 bp TATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTaGGCCTCATACCTGCTCTCTGCGGCCTGCAGCTGTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: YKSKISNSNTWVILF*ASYLLSAACSCPLE
Trigger: CTCCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644882.1
CDS GCA 90 bp CAGTGCCAGCCACGGAACTCTGATAGCAAAGAACAAGCGGGACCATaGCAGCCCAAGTCTGAAACAATTCTAGTACATAAAGAAATAGCC +
Preference number: 5 (lower is better)
Translates to: QCQPRNSDSKEQAGP*QPKSETILVHKEIA
Trigger: GGCTATTTCTTTATGTACTAGAATTGTTTCAGACTTGGGCTGGCATGGTCCCGCTTGTTCTTTGCTATCAGAGTTCCGTGGCTGGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644319.1
CDS GCA 90 bp ACGTCCAGCCTGGGAAAGATTTTCTTGCTGAGGAATAGGAAGAGATaGTCTCCTCTTCTGTGGGGACATCATTGTGTCTGCCTGTCATAT +
Preference number: 5 (lower is better)
Translates to: TSSLGKIFLLRNRKR*SPLLWGHHCVCLSY
Trigger: ATATGACAGGCAGACACAATGATGTCCCCACAGAAGAGGAGAGCATCTCTTCCTATTCCTCAGCAAGAAAATCTTTCCCAGGCTGGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp GAAGGTTCTTCATTGGGGCCACTACCAAACTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: EGSSLGPLPNCSSDN*YFSFQCCQPGVFHG
Trigger: ACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGGCCCCAATGAAGAACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CCA 90 bp GCCCAGGATGTACATCAGAATCACCTGGAGAGCTTACAGAAACTCTaGAGCAGGTTAACTGTTCTAGCGACAACTGGTACTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: AQDVHQNHLESLQKL*SRLTVLATTGTSVS
Trigger: GGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTAACCTGCTCCAGAGTTTCTGTAAGCTCTCCAGGTGATTCTGATGTACATCCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS CCA 90 bp GAGTTAACTTCAAAGCAACCCAATAGGAGAAACAAGCTCACATGGTaGCTGGAAAGTGCTTGTATAGCTGGACCACGGAGTAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: ELTSKQPNRRNKLTW*LESACIAGPRSSGT
Trigger: AGTCCCACTACTCCGTGGTCCAGCTATACAAGCACTTTCCAGCCACCATGTGAGCTTGTTTCTCCTATTGGGTTGCTTTGAAGTTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp TGTGAGTTAACTTCAAAGCAACCCAATAGGAGAAACAAGCTCACATaGTGGCTGGAAAGTGCTTGTATAGCTGGACCACGGAGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: CELTSKQPNRRNKLT*WLESACIAGPRSSG
Trigger: CCCACTACTCCGTGGTCCAGCTATACAAGCACTTTCCAGCCACCATGTGAGCTTGTTTCTCCTATTGGGTTGCTTTGAAGTTAACTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp AAGATTTTCTTGCTGAGGAATAGGAAGAGATGCTCTCCTCTTCTGTaGGGACATCATTGTGTCTGCCTGTCATATCTGTGCCTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: KIFLLRNRKRCSPLL*GHHCVCLSYLCLWH
Trigger: GTGCCACAGGCACAGATATGACAGGCAGACACAATGATGTCCCCACAGAAGAGGAGAGCATCTCTTCCTATTCCTCAGCAAGAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSEGSS*GPLPNC
Trigger: ACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCCTTCTTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: PFLADTKINLHGAVADESLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCACTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLALSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: RSCKGTFHKGDERVRTHWKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...CCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGAAGTTGGAGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LYCKGVTDQVGHFQEKLERQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CTCCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTTTACTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CWGSQRSSFSTSCTKDFTRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGCCTAAAGGTGCAGTTCCTCATGCTCAAGTGCTTCTCGGGTAACCTCTCCCAGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: GLKVQFLMLKCFSGNLSQTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CTGGGAGAGGTTACCCGAGAAGCACTTGAGCATGAGGAACTGCACCTTTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTTCCCAGAGGAGTTCCTTTTCCACCAGTTGTACCAAAGACTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: EVAGVPRGVPFPPVVPKTQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AGTCTTTGGTACAACTGGTGGAAAAGGAACTCCTCTGGGAACCCCAGCAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644255.1
ENST00000644997.1
ENST00000647078.1
CDS-3UTR CAA 90 bp GAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: ESRFDLLGSPQEFCQSRVQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATCAAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCATGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: IKRVGLTCWVPHKSSAKACSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...TGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCTGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: EVGGVVIPQTIDGLQRVAAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...AGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: SGKGMLSHPRGLYPWPVFHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000643875.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AAGAGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: KRVGLTCWVPHKSSAKAELFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCTGTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: AVELGYHSVTLLLELIVSCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...AGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCACAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCGTGTCAGGCCCAAGCTaGTCCAGGGAGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVVSGPS*SREECK
Trigger: TTTACACTCCTCCCTGGACAAGCTTGGGCCTGACAC...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTAAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: VMRTQKGDEVARVHSIKAVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...CGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACATCTGGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: TSGCPSLVTSTDLSWQHYAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...ATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFAALIT*RRSRLF
Trigger: GAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAATCTGGCTGTGGAGCTaGGTTACCATAGTGTCACGC +
Preference number: 5 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLAIWLWS*VTIVSR
Trigger: GCGTGACACTATGGTAACCAAGCTCCACAGCCAGAT...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCATTCTCTCTTCCTTCCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: DGVVCVDMVLQNPFSLPSGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GGAAGGAAGAGAGAATGGATTCTGCAAGACCATGTCTACACAGACAACACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTTAGGGTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PTGPWIRTHCEVNERGLGSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...CCCTAACCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGAACACCAACTGGCCCTTGGATTAGAACACACTGCGAGGTAAATGAGAGGGGGTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GTPTGPWIRTHCEVNERGSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...CCCCCTCTCATTTACCTCGCAGTGTGTTCTAATCCAAGGGCCAGTTGGTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTATTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: TLLLAFFSSIRSSAIMFLKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CAGGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQREHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCAAGAGTCTGGAGTTTaGTTCCCTGCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDQESGV*FPAALL
Trigger: AAGCAGGGCAGCAGGGAACAAAACTCCAGACTCTTG...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTGTCCAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: SCPKDLRPISTHELALRPFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...GGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTGGACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp GGGAAGAAGAGACAAGAGCTTTCCCAAAGGGTGTGTGGTCTCCACAGTGCCAGCGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: GKKRQELSQRVCGLHSASESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...GCTGGCACTGTGGAGACCACACACCCTTTGGGAAAGCTCTTGTCTCTTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCCAGGTCTGATTCAAACCCATaGCATTTTAGGTCAGAATTC +
Preference number: 5 (lower is better)
Translates to: LLGSPQEFCQSRVLEPPRSDSNP*HFRSEF
Trigger: GAATTCTGACCTAAAATGCAATGGGTTTGAATCAGA...CCTGGGTGGTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCTACCAAACTACTATTaGTCTAGGGAGACTCTGAGT +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNLPNYY*SRETLS
Trigger: ACTCAGAGTCTCCCTAGACAAATAGTAGTTTGGTAG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR CAA 90 bp GGGAACTCAGAGTCTGAGGTAGCTGCCCTGGCATATTTAACAACATCAGCCGAGCCAAGAGGTGCAGAATaGAGGTTCTCTTTAAAGACA +
Preference number: 5 (lower is better)
Translates to: GNSESEVAALAYLTTSAEPRGAE*RFSLKT
Trigger: TGTCTTTAAAGAGAACCTCAATTCTGCACCTCTTGG...CTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCCAAGAGGTGCAGAATaGAGGTTCTCTTTAAAGACA +
Preference number: 5 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLPRGAE*RFSLKT
Trigger: TGTCTTTAAAGAGAACCTCAATTCTGCACCTCTTGG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCCGCCACGTGGCCTGGTTTCTTCAGGCACCATGATGACAGACGGCCAAAAATGATGGTACTGCCATCCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: SATWPGFFRHHDDRRPKMMVLPS*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGGATGGCAGTACCAT...CATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644997.1
CDS TCA 90 bp TGTGTCACCGTGCCCAGCCCTAGTTTGGTTTTTGTTGTCTACAATTaGAGGCATCCTGACTATCACAACTCAGCTGCATCACCCGTTTTA +
Preference number: 5 (lower is better)
Translates to: CVTVPSPSLVFVVYN*RHPDYHNSAASPVL
Trigger: TAAAACGGGTGATGCAGCTGAGTTGTGATAGTCAGGATGCCTTCAATTGTAGACAACAAAAACCAAACTAGGGCTGGGCACGGTGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 90 bp GACTCCTCTCTACATCCGGCCGAAAAAGACTCTTTACAAAGCACATaGCCAAGAAACCCAAAAAGAAGGCCCATGTGTGATGGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: DSSLHPAEKDSLQST*PRNPKRRPMCDGEV
Trigger: AACTTCTCCATCACACATGGGCCTTCTTTTTGGGTTTCTTGGGCATGTGCTTTGTAAAGAGTCTTTTTCGGCCGGATGTAGAGAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 90 bp GAGCTTACAGAAACTCTGGAGCAGGTTAACTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: ELTETLEQVNCSSDN*YFSFQCCQPGVFHG
Trigger: ACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTAACCTGCTCCAGAGTTTCTGTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS-3UTR CAA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACATCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTSEGSS*GPLPNC
Trigger: ACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCTGTCCAAGAGGTGCTaGTCATGTGGCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSLSKRC*SCGSCK
Trigger: CTTGCAAGAGCCACATGACAAGCACCTCTTGGACAG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: QWQRNAKSSTRFISMASVKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...AACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAAAGCGGGCTGAGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ESGLRFGETQNSHLHMRLRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...AAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCTCAGCCCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCCCCGTCGTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAAACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: PPSYLCHHCRCQCSGKGKTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...TTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATACGACGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: GVVIPQTIDGLQRVAWEVQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: CAIIADANAVGRANDSLVQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: CLNRFSAGIARVTESLTVCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCAAAGAGTTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: RRSWRSGHTTNHRWAPKSCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...ACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTATCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: ICAIIADANAVGRANDSLSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: QESFETCIHTSCSVPTICGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACATTTCCAGGAGGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: YQRLYCKGVTDQVGHFQEGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...CTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403810.6
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: RRSCKGTFHKGDERVRTHGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCATTCTCTCTTCCTTCCGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: DGVVCVDMVLQNPFSLPSAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...GGAAGGAAGAGAGAATGGATTCTGCAAGACCATGTCTACACAGACAACACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: ICAIIADANAVGRANDSLAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp TGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: CGIIGSMVINTKTPVVRTAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...TGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CATGGTTATCAACACCAAGACGCCTGTTGTGAGGACAACGACGTCAGTGTCCATCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: HGYQHQDACCEDNDVSVHLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...ATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: CAIIADANAVGRANDSLVLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLELFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: VLQLFQIELVDLPKNQQLLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTTGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: ELGYHSVTLLLELIVSSLLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCCTGTTCAAGAACTCCATCTGCTGCTGGACCGACTCACTGTTTGAGAGCTTTTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ACSRTPSAAGPTHCLRAFCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...AAAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCTTCTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ISSVPKEGGLSWPGEIPVLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...AACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFSRAAA*ITLRRS
Trigger: GCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCTGTAATTCCTGGCTCTGGTTGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: AIMFLQSSSFVCNSWLWLLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CAACCAGAGCCAGGAATTACAGACGAAGCTGGAGGACTGCAGGAACATGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMEMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTATACACAGCCAGCCTTaGCCAGCATTCTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAIHSQP*PAFSRT
Trigger: AGTCCGGGAGAATGCTGGCAAAGGCTGGCTGTGTAT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCTGCAGTCCTCCAGCTTCGTCCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FSSIRSSAIMFLQSSSFVLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GACGAAGCTGGAGGACTGCAGGAACATGATTGCGGAGCTGCGGATAGAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CGGGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: RVEGKVKRHFNARSKNRSGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...AGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAAGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: QRTSVPFPHMNLHSDPGNGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKATQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTTGTAGAATTCCTCTCGGTCATGCTGCAGCTGTCTGATCTGGCTGTGGAGCTTTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: VVEFLSVMLQLSDLAVELFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...AAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp AGGACCTCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: RTSVPFPHMNLHSDPGNRTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...CCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGAGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTATCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTGGAGCTTGGTTACCATAGTGTCACGCTGCTCCTGGAGCTGATTGTATCTAGCTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: VELGYHSVTLLLELIVSSSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...GCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGCTCCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp GGTGGAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: GGGEGQEAFQCQIQKPFCSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...GCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCGTCCCATTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: SVPFPHMNLHSDPGNRKAGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...AGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAATGGGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642617.1
ENST00000642627.1
ENST00000644097.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACCACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS GCA 90 bp TATTTCAGCCTTCCAAATAGTTGGCACTGTAGGCATGTGTCACCGTaGCCAGCCCTAGTTTGGTTTTTGTTGTCTACAATTGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: YFSLPNSWHCRHVSP*PALVWFLLSTIEGI
Trigger: GATGCCTTCAATTGTAGACAACAAAAACCAAACTAGGGCTGGGCACGGTGACACATGCCTACAGTGCCAACTATTTGGAAGGCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 90 bp TCATCAGTGGCGCACAGAAATCAAAAGAATAAGCTCAGGACAAGTTaGACAGTGGCCGTGCACAGAAGCTGTTGTACTCATGAAGAACAT +
Preference number: 5 (lower is better)
Translates to: SSVAHRNQKNKLRTS*TVAVHRSCCTHEEH
Trigger: ATGTTCTTCATGAGTACAACAGCTTCTGTGCACGGCCACTGTGCAACTTGTCCTGAGCTTATTCTTTTGATTTCTGTGCGCCACTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS CCA 90 bp ATTTTAAACAAAGATGGCGCCCATCCAGTCAACTTGGCGATAGTGTaGGCTAATCAGCTTGGGCCACCTAGCTTGTTTTTCCATTTGCAA +
Preference number: 5 (lower is better)
Translates to: ILNKDGAHPVNLAIV*ANQLGPPSLFFHLQ
Trigger: TTGCAAATGGAAAAACAAGCTAGGTGGCCCAAGCTGATTAGCCCACACTATCGCCAAGTTGACTGGATGGGCGCCATCTTTGTTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS CCA 90 bp ACATATTCGTTAATCCTGTCCAAGAGGTGCTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: TYSLILSKRCCSSDN*YFSFQCCQPGVFHG
Trigger: ACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGCACCTCTTGGACAGGATTAACGAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643691.1
CDS-3UTR CAA 90 bp ATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAAGTACATCAGCAGTGGTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: IDGLQRVAWEVNKVHQQWSEGSS*GPLPNC
Trigger: ACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGA...CCACTGCTGATGTACTTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCCCGACATTTGCTTGTaGGGCCATTCTCTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFPDICL*GHSLAR
Trigger: TCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: MLLGLRRESLDLLTRADFEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTAGGCAAAAGAGGTGCTaGAGAGAGCTTATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRRQKRC*RELMLP
Trigger: TGGAAGCATAAGCTCTCTCAAGCACCTCTTTTGCCT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: VFVPSLQMPMQWEGQMTAQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp CACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGACAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: HLQLYQRLYCKGVTDQVGQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AAGGGTACATTCCATAAAGGCGATGAAAGAGTGCGTACACACTGGCATGGAGATTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KGTFHKGDERVRTHWHGDCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...ATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ATTTGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTATGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ICAIIADANAVGRANDSLCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...TAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ACGCAAAAAGGAGACGAAGTTGCAAGGGTACATTCCATAAAGGCGATGAAAGAGTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: TQKGDEVARVHSIKAMKESSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...CTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAGGTTTTCTTTCATACTGTAATGAGAACGCAAAAAGGAGACGAAGTTGCAAGAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PGFLSYCNENAKRRRSCKRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...CTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: QESFETCIHTSCSVPTICNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCTCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAACCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PLHCALPWNLSTRHYNSQPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...TTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCCAAAGTACTTGCTACACAGAGCAGCACCATACCCTCCTGTCCAAACACTGTACTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: AKVLATQSSTIPSCPNTVLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...TACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGCAAGTACTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGACCGACTCACTGTTaGAGAGCTTTTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGPTHC*RAFGKP
Trigger: AGGTTTCCCAAAAGCTCTCAAACAGTGAGTCGGTCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCAGAATCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: ILCHSEDGVVCVDMVLQNPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...ATTCTGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAGGTGGGGATCCGAGTAGGTTATGCACATTGGCCAAACAGCTGAGACAGGTACTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SGGDPSRLCTLAKQLRQVLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...TACCTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACTCGGATCCCCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGACCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: HLTIQYQLPACARLSSWDLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GTCCCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CQIQKPFCIQSAVQRTSVLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGACTCCGGAGCTCATTaGCTCTGCGTCTTCCTATCC +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFDSGAH*LCVFLS
Trigger: GGATAGGAAGACGCAGAGCAAATGAGCTCCGGAGTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGTCACATAAGCTTTGGCTCACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: CHISFGSQSSSPLASPLFFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...GAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTGAGCCAAAGCTTATGTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCGGCCTGACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: FKHLGYPFLSLIPALCGLTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...CAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCAGTGCAATCAATGCCTaGGGATCTTTGCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCSAINA*GSLQQS
Trigger: AGATTGCTGCAAAGATCCCAAGGCATTGATTGCACT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCACATCTGACAATTCAGTACCAACTGCCAGCCTGTGCTAGGCTGAGTAGTTGGGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: PHLTIQYQLPACARLSSWESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...CCAACTACTCAGCCTAGCACAGGCTGGCAGTTGGTACTGAATTGTCAGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMESHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: EGKVKRHFNARSKNRSAFGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...GAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp GGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACTCTGATTCAAACCCATaGCATTTTAGGTCAGAATTC +
Preference number: 5 (lower is better)
Translates to: GLTCWVPHKSSAKAEFWNSDSNP*HFRSEF
Trigger: GAATTCTGACCTAAAATGCAATGGGTTTGAATCAGA...GTTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGGAACACCTTGAGAGCAGCTaGTTAGTCCATTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: RFDLLGSPQEFCQSRVLEHLESS*LVHFQL
Trigger: TAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTG...TTCCAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTCTGTTTGAGAGCTTGTaGTTGGCCTTCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELLFESL*LAFFSS
Trigger: AGAACTGAAGAAGGCCAACAACAAGCTCTCAAACAG...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644184.1
CDS-3UTR CAA 90 bp ATTTCCAGGAGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATGGGCTCCACTAATCTCTTCCACCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ISRRSWRSGHTTNHRWAPLISST*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGGTGGAAGAGATTAG...TGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCTCCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647279.1
CDS TCA 90 bp GCACAGTGGCCGTGCACAGAAGCTGTTGTACTCATGAAGAACATATaGAATGCCTATGATATTTCAGCCATTACCTTGTCATGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: AQWPCTEAVVLMKNI*NAYDISAITLSCGS
Trigger: AGAGCCACATGACAAGGTAATGGCTGAAATATCATAGGCATTTCATATGTTCTTCATGAGTACAACAGCTTCTGTGCACGGCCACTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS CCA 90 bp TCCTGCTGGAAGCAGCCACTTATTGCTAGAGCAACCCAGCCTACATaGTTTGGCCTCAAGTATCAATTAGGTAGTAGAAGTTACATTTCA +
Preference number: 5 (lower is better)
Translates to: SCWKQPLIARATQPT*FGLKYQLGSRSYIS
Trigger: TGAAATGTAACTTCTACTACCTAATTGATACTTGAGGCCAAACCATGTAGGCTGGGTTGCTCTAGCAATAAGTGGCTGCTTCCAGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS-3UTR CAA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATCTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCAATGGTACTGCCATCCTGGAACAAATACTATTGGATATTTTCATGTCTCTGGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SNGTAILEQILLDIFMSLEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...CAGAGACATGAAAATATCCAATAGTATTTGTTCCAGGATGGCAGTACCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642854.1
CDS-3UTR CAA 90 bp TTAATAAAGTACATCAGCAGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTACTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: LIKYISSGKGMLSHPRGLLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...TAAACCTCGTGGATGACTTAGCATTCCTTTGCCACTGCTGATGTACTTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFLVMWL*QGGQDV
Trigger: CACATCCTGACCACCTTGCAAGAGCCACATGACAAG...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TGTGCCATCATTGCAGATGCCAATGCAGTGGGAAGGGCAAATGACAGCTTAGTGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: CAIIADANAVGRANDSLVTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CACTAAGCTGTCATTTGCCCTTCCCACTGCATTGGCATCTGCAATGATGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
CDS-3UTR CAA 90 bp GTTCTGCAGTTGTTCCAAATAGAGCTCGTTGACCTCCCCAAGAACCAACAGCTGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: VLQLFQIELVDLPKNQQLTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CAGCTGTTGGTTCTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: RVGLTCWVPHKSSAKAEFTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...AAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATCCAGTTCATGGTCCTaGGATCCAGTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSSSWS*DPVTNS
Trigger: GGAATTAGTGACTGGATCCAAGGACCATGAACTGGA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCGGATCCAGAGAGATTTaGGCACACTCGATCACAACA +
Preference number: 5 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVGSREI*AHSITT
Trigger: TGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCC...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCGCTCCAAAGAGTAGCTaGTGGTGGTTCAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVAPKSS*WWFSYQ
Trigger: CTGATAACTGAACCACCACAAGCTACTCTTTGGAGC...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCATTTCCAGGAGAAGTaGGAGGAGTGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAHFQEK*EEWSYH
Trigger: GTGGTATGACCACTCCTCCAACTTCTCCTGGAAATG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGGAAAGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: QESFETCIHTSCSVPTICCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...GCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTAGAGTGACAGAACCTTaGCTGCCAGGTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFRVTEP*LPGGSS
Trigger: AGAAGAGCCACCTGGCAGCAAAGGTTCTGTCACTCT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTATGGGAGTAAAGGCTaGCTTTGGTGTGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFYGSKG*LWCVRP
Trigger: GGGCCTGACACACCAAAGCAAGCCTTTACTCCCATA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACTGGGTAAAGGCAACTaGTTCAGCTCCTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVLGKGN*FSSLLC
Trigger: GCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFVQSTD*LGKGNL
Trigger: CAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGAC...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCTCTCTGCTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LQFKHLGYPFLSLIPALCSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...GCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTTCATTGTGCCCTACCATGGAATCTGAGCACCCGTCATTACAACAGTCAAGCTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SSLCPTMESEHPSLQQSSSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...GCTTGACTGTTGTAATGACGGGTGCTCAGATTCCATGGTAGGGCACAATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCCTTCTCTTGTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSLFFLQTNLPHLDVLLLFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...CAAGAGAAGGACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTCCAGATGCCTCTTCATaGTGCCCTACCATGGAATCT +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSAPDASS*CPTMES
Trigger: AGATTCCATGGTAGGGCACAATGAAGAGGCATCTGG...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTAGGTTCAGGGGAATCTaGGCTTCCACACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFRFRGI*ASTPKS
Trigger: AGACTTGGGTGTGGAAGCCAAGATTCCCCTGAACCT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGGAGCTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: LELIVSSLFFLQTNLPHLKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...CAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642811.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACAAATTTGGCCTCATATaGCACAGGTTCAAAGGACGC +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDKFGLI*HRFKGR
Trigger: GCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTT...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACACCTTGTTGTTGGCCTTCTTCAGTTCTATCCGCAGCTCCGCAATCATGTTCCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: TPCCWPSSVLSAAPQSCSTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GGAACATGATTGCGGAGCTGCGGATAGAACTGAAGAAGGCCAACAACAAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642811.1
ENST00000643625.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCAGCATTCTCCCGGACTCTGTTTAGACTGCTCTGCCATTACTAACATGGAGCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: CQHSPGLCLDCSAITNMELVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...CTCCATGTTAGTAATGGCAGAGCAGTCTAAACAGAGTCCGGGAGAATGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGTCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: MPDPKTVLHSVSCPKDLRLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...ACGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACCTTCTCAGAACAGTTaGGACTGTTTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLPSQNS*DCFPNH
Trigger: ATGGTTGGGGAAACAGTCCAAACTGTTCTGAGAAGG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCCCACCTCTTAGTGCTTTCAGCGAGAAAAGGTGAGTCTCATTACGCAGAACTTGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: SHLLVLSARKGESHYAELEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...AAGTTCTGCGTAATGAGACTCACCTTTTCTCGCTGAAAGCACTAAGAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACCTCCGACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: NARSKNRSAFSQLSKGPPTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...CGGAGGTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGTCCTCCGTAATATATTaGTGGTCCATAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWSSVIY*WSIEVF
Trigger: GAAGACTTCTATGGACCACAAATATATTACGGAGGA...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCACATTGGCCAAACAGCTGAGACAGGTATGCTCACCCATAGTGATTTCTGGTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MHIGQTAETGMLTHSDFWSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...CCAGAAATCACTATGGGTGAGCATACCTGTCTCAGCTGTTTGGCCAATGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGTCACTGTGCCTGTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: SGIIRLLKVRLASESLCLFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...CAGGCACAGTGACTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CAA 90 bp AGTAGGTTTGACCTGCTGGGTTCCCCACAAGAGTTCTGCCAAAGCAGAGTTTTGTCTGATTCAAACCCATaGCATTTTAGGTCAGAATTC +
Preference number: 5 (lower is better)
Translates to: SRFDLLGSPQEFCQSRVLSDSNP*HFRSEF
Trigger: GAATTCTGACCTAAAATGCAATGGGTTTGAATCAGA...CAAAACTCTGCTTTGGCAGAACTCTTGTGGGGAACCCAGCAGGTCAAACCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS TCA 90 bp CTTCATTGGGGCCACTACCAAACTACTATTTGTCTAGGGAGACTCTaGGTTTGCCTTCTGTGTAGTCAGAAGACGATAATGTCATATCTG +
Preference number: 5 (lower is better)
Translates to: LHWGHYQTTICLGRL*VCLLCSQKTIMSYL
Trigger: CAGATATGACATTATCGTCTTCTGACTACACAGAAGGCAAACTCAGAGTCTCCCTAGACAAATAGTAGTTTGGTAGTGGCCCCAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490179.3
ENST00000642646.1
CDS TCA 90 bp TACACTGTTAAGTTAATGTTCCGCTCTGGCTCAGGAACTCTCAGGTaGCTTCTTAGGGTAATATTCTATCAAGTGAACCAAGACGCCTTC +
Preference number: 5 (lower is better)
Translates to: YTVKLMFRSGSGTLR*LLRVIFYQVNQDAF
Trigger: GAAGGCGTCTTGGTTCACTTGATAGAATATTACCCTAAGAAGTCACCTGAGAGTTCCTGAGCCAGAGCGGAACATTAACTTAACAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642249.1
ENST00000646788.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACTCCCCGACATTTGCTaGTTGGGCCATTCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKLPDIC*LGHSLA
Trigger: AGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGATGTCCTTCTCTTGTAACTTCAACTGATCTTTCATGGCAGCATTATGTTCCTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: GCPSLVTSTDLSWQHYVPKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...AGGAACATAATGCTGCCATGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCTGATCCTCTGTCATTCAGAAGATGGTGTTGTCTGTGTAGACATGGTCTTGCACAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: SDPLSFRRWCCLCRHGLAQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...TGCAAGACCATGTCTACACAGACAACACCATCTTCTGAATGACAGAGGATCAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000642854.1
ENST00000644255.1
ENST00000644997.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GTCATACCACAAACCATAGATGGGCTCCAAAGAGTAGCCTGGGAAGTTAATAAATGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: VIPQTIDGLQRVAWEVNKCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...TTTATTAACTTCCCAGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643875.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTTCTGTGGGATCCAGAGAGATTTTGGCACACTCGATCACAACATCATGAGTTTCTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: LLWDPERFWHTRSQHHEFLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...AAACTCATGATGTTGTGATCGAGTGTGCCAAAATCTCTCTGGATCCCACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642811.1
ENST00000646391.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCATGTAAACGCTTTCATGTAAAGACAACCAGCTTTGCAGGCTATGTCCTCCTGCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SCKRFHVKTTSFAGYVLLPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...CAGGAGGACATAGCCTGCAAAGCTGGTTGTCTTTACATGAAAGCGTTTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTGCCCTCTGTGTTTCCTTTaGCTTTCTTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: LRSPIQTPGLSFSEPHTCPLCFL*LSLTAP
Trigger: AGGAGCTGTTAAAGAAAGCAAAAGGAAACACAGAGG...GCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGTGCTTGTTCTGCAGTaGTTCCAAATAGAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLVLVLQ*FQIELV
Trigger: AACGAGCTCTATTTGGAACAACTGCAGAACAAGCAC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATCCGTTTTTGGGAGGTATTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GLSWPGEIPVPKSVFGRYSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...ATACCTCCCAAAAACGGATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATGGTCACATACACTTaGCAGAAACTCTTTGGACCT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCMVTYT*QKLFGP
Trigger: AGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGAGCACTTGTTGAGTTaGGATTCTCTGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFEHLLS*DSLPLP
Trigger: TGGCAGTGGCAGAGAATCCAAACTCAACAAGTGCTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATTTCAGGAGCACTTGTaGAGTTTGGATTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLFQEHL*SLDSLP
Trigger: TGGCAGAGAATCCAAACTCAACAAGTGCTCCTGAAA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTAGTAGGTTATGCACATaGGCCAAACAGCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSASRLCT*AKQLRQ
Trigger: CTGTCTCAGCTGTTTGGCCAATGTGCATAACCTACT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TGCCTGAACAGGTTTTCTGCTGGTATAGCTAGGGTGACAGAGTCTCTAACTGTCCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: CLNRFSAGIARVTESLTVLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...GACAGTTAGAGACTCTGTCACCCTAGCTATACCAGCAGAAAACCTGTTCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTGATAGGTATACTGATTaGAGTCACTCCACACCAGGC +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSADRYTD*SHSTPG
Trigger: GCCTGGTGTGGAGTGACTCAAATCAGTATACCTATC...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAGACTGCTCTGCCATTACTAACATGGAGAGTGTGATGACATCAGCTCCCTGGACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LDCSAITNMESVMTSAPWTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...CCAGGGAGCTGATGTCATCACACTCTCCATGTTAGTAATGGCAGAGCAGTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTCATAAGCCAAAGTACTaGCTACACAGAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: MLLGLRRESLDLLTRADFHKPKY*LHRAAP
Trigger: TGGTGCTGCTCTGTGTAGCAAGTACTTTGGCTTATG...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TACGAAATAACTCTCGAGCCTTCATACCCAGGAAGCTTTTTGAACTGGGAAGTGGGACAGCAAACTCTTTaGATTCCAATTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: YEITLEPSYPGSFLNWEVGQQTL*IPIPIH
Trigger: GTGAATGGGAATTGGAATCAAAAGAGTTTGCTGTCC...CACTTCCCAGTTCAAAAAGCTTCCTGGGTATGAAGGCTCGAGAGTTATTTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTTTGAGAGCTTGTTGTaGGCCTTCTTCAGTTCTATC +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCFESLL*AFFSSI
Trigger: GATAGAACTGAAGAAGGCCAACAACAAGCTCTCAAA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644184.1
CDS TCA 90 bp CCAACACTTCTGGGCCTCTACTGCCATCATATTTACTTAAGAGAGTaGCCTGTGAGTTGTAGGGCAGTAACTACTATGCTTTATTTTGGA +
Preference number: 5 (lower is better)
Translates to: PTLLGLYCHHIYLRE*PVSCRAVTTMLYFG
Trigger: TCCAAAATAAAGCATAGTAGTTACTGCCCTACAACTCACAGGTCACTCTCTTAAGTAAATATGATGGCAGTAGAGGCCCAGAAGTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS TCA 90 bp GTGCACAGAAGCTGTTGTACTCATGAAGAACATATGAAATGCCTATaGTATTTCAGCCATTACCTTGTCATGTGGCTCTTGCAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VHRSCCTHEEHMKCL*YFSHYLVMWLLQGG
Trigger: ACCACCTTGCAAGAGCCACATGACAAGGTAATGGCTGAAATATCATAGGCATTTCATATGTTCTTCATGAGTACAACAGCTTCTGTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKEAPRH*LVGPFS
Trigger: AGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTC...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGTGGCAAAGGAATGCTAAGTCATCCACGAGGTTTATATCCATGGCCAGTGTTCACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: SGKGMLSHPRGLYPWPVFTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...GAACACTGGCCATGGATATAAACCTCGTGGATGACTTAGCATTCCTTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403810.6
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCCAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSACSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTACTTTTCCACCTGCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLLFHLQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAG...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTGTGTAGACATGGTCTaGCAGAATCCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSCVDMV*QNPFSL
Trigger: AAGAGAGAATGGATTCTGCAAGACCATGTCTACACA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTACTATTTGGTAGAAATTCACATTGGCTTGTCACAGCACACTTCAGTTCTGCTAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LLFGRNSHWLVTAHFSSANDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...AGCAGAACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTCTACCAAATAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTGGAATTTTACAAGGACTGGGAGTGAAGATACTGGTCTCCAAAGAAGTCTGTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RWNFTRTGSEDTGLQRSLSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...CAGACTTCTTTGGAGACCAGTATCTTCACTCCCAGTCCTTGTAAAATTCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGTTCCAAAAGAAGGTGGTCTTTCTTGGCCAGGTGAGATTCCAGTTCCAAAATTCATTTCTACTTCCTTaGTGGTATCTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LFQKKVVFLGQVRFQFQNSFLLP*WYLSAC
Trigger: ACAAGCACTCAGATACCACAAAGGAAGTAGAAATGA...ATTTTGGAACTGGAATCTCACCTGGCCAAGAAAGACCACCTTCTTTTGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000643625.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AGGTCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RSRGISMPDPKTVLHSVSTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TATCAGATGCAGATCTGTGTGTTTATTCACCTGCAGGGACTCCGGAGCTCATTTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: YQMQICVFIHLQGLRSSFTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...AAATGAGCTCCGGAGTCCCTGCAGGTGAATAAACACACAGATCTGCATCTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATTCTTTCAGGAGCACTaGTTGAGTTTGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLFFQEH*LSLDSL
Trigger: CAGAGAATCCAAACTCAACAAGTGCTCCTGAAAGAA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QEAFQCQIQKPFCIQSAVLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...GACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTTGCCCAGGACTGAATaGCCTCTCGAGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFLPRTE*PLESNT
Trigger: AGTATTACTCTCGAGAGGCAATTCAGTCCTGGGCAA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CACAAAGTAGCTCACCTCTCGCCTCTCCACTCTTCAAGCTTAGTAAGAAGATTCCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: HKVAHLSPLHSSSLVRRFLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...GAATCTTCTTACTAAGCTTGAAGAGTGGAGAGGCGAGAGGTGAGCTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGGTCACATACACTTTGCAGAAACTCTTTGGACCTTCAGAGCCTTTCTGCTGCCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: MVTYTLQKLFGPSEPFCCLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...GCAGCAGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAGTGTATGTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGCTTGTCAACGGCTTTTaGAAAATCCATCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRLVNGF*KIHQSS
Trigger: AGAACTTTGATGGATTTTCAAAAAGCCGTTGACAAG...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGATTAAATTTGGCCTCATATTGCACAGGTTCAAAGGACGCAACCATTTGGGGGGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: RLNLASYCTGSKDATIWGGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...CCCCCAAATGGTTGCGTCCTTTGAACCTGTGCAATATGAGGCCAAATTTAATCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAAGAGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: SRGISMPDPKTVLHSVSCFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...ACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCTCTTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAATTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACTTTTTCCAATACTTGTaGCGGGTCGGTTTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: ISMPDPKTVLHSVSCPKDFFQYL*RVGFKA
Trigger: TGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAA...GTCCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAAGGACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: AFQCQIQKPFCIQSAVQRTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...CCTTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AACCAGACTTACCTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: NQTYLQCNKLPGLIESQPTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...GGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAGGTAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTGCATTCACGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: HELALRPWKQESFETCIHESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...GTGAATGCACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGGGTCGGCAGATCACACCTTGAGAGCAGCTTGTTAGTCCATTTTCAATTATTCTCTGATTCAAACCCATaGCATTTTAGGTCAGAATTC +
Preference number: 5 (lower is better)
Translates to: GVGRSHLESSLLVHFQLFSDSNP*HFRSEF
Trigger: GAATTCTGACCTAAAATGCAATGGGTTTGAATCAGA...GAATAATTGAAAATGGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642646.1
ENST00000642745.1
ENST00000645150.1
ENST00000647078.1
ENST00000647462.1
CDS-3UTR CAA 90 bp AGAAGATGCTGTTTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCGACACAAAAATCAATTaGCATGGTGCTGTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: RRCCFPDCGIIGSMVINTDTKIN*HGAVAD
Trigger: ATCTGCTACAGCACCATGCAAATTGATTTTTGTGTC...GGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CAA 90 bp CCCTTCTTGGCAGACACAAAAATCAATTTGCATGGTGCTGTAGCAGATGAATCCGACACAAAAATCAATTaGCATGGTGCTGTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: PFLADTKINLHGAVADESDTKIN*HGAVAD
Trigger: ATCTGCTACAGCACCATGCAAATTGATTTTTGTGTC...GGATTCATCTGCTACAGCACCATGCAAATTGATTTTTGTGTCTGCCAAGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642344.1
ENST00000642854.1
CDS-3UTR CAA 90 bp GAGGAGTTCCTTTTCCACCTGCAGTTGTACCAAAGACTTTACTGTAAGGGTGTGAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAAT +
Preference number: 5 (lower is better)
Translates to: EEFLFHLQLYQRLYCKGVKELPF*ADTKIN
Trigger: ATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTT...CACACCCTTACAGTAAAGTCTTTGGTACAACTGCAGGTGGAAAAGGAACTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642344.1
CDS-3UTR CAA 90 bp TTCCCAGACTGTGGAATCATTGGTAGCATGGTTATCAACACCAAGACGCCTGTTAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAAT +
Preference number: 5 (lower is better)
Translates to: FPDCGIIGSMVINTKTPVKELPF*ADTKIN
Trigger: ATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTT...AACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS-3UTR CAA 90 bp GAAAGCGGGCTGAGATTTGGTGAGACACAGAATAGCCATCTTCATATGAGGCTTAAAGAGTTACCCTTCTaGGCAGACACAAAAATCAAT +
Preference number: 5 (lower is better)
Translates to: ESGLRFGETQNSHLHMRLKELPF*ADTKIN
Trigger: ATTGATTTTTGTGTCTGCCAAGAAGGGTAACTCTTT...AAGCCTCATATGAAGATGGCTATTCTGTGTCTCACCAAATCTCAGCCCGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642344.1
ENST00000642854.1
ENST00000644997.1
CDS TCA 90 bp GGTCTACCTAGTATAGTGCCAAATATCTGTACATCAAGGTTCTCATaGGCACTAGGGTTTCAGATCTCGTTTCCACCAAGTTCATTATTC +
Preference number: 5 (lower is better)
Translates to: GLPSIVPNICTSRFS*ALGFQISFPPSSLF
Trigger: GAATAATGAACTTGGTGGAAACGAGATCTGAAACCCTAGTGCTCATGAGAACCTTGATGTACAGATATTTGGCACTATACTAGGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646788.1
CDS-3UTR CAA 90 bp CATATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATC +
Preference number: 5 (lower is better)
Translates to: HINLRSPIQTPGLSFSEPKRVAA*PTYSLI
Trigger: GATTAACGAATATGTGGGCAAAGCCGCCACTCGTTT...AGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp ATTCCAATGGTTAAACCAGCCTACTTATCTCAGAGGATGGATAATGTGGCGCTGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: IPMVKPAYLSQRMDNVALTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CAGCGCCACATTATCCATCCTCTGAGATAAGTAGGCTGGTTTAACCATTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTTCCACACATGAACTTGCACTCAGACCCTGGAAACAGGAAAGCTTTGAAACGTACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: FPHMNLHSDPGNRKALKRTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...ACGTTTCAAAGCTTTCCTGTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp AACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: NVHSHLLFCANNMQVNTDLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...ATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CTGATTGTATCTAGCTTGTTCTTTCTGCAGACTAACCTTCCACATCTGGATGTCCTGATTGTATCTAGCTaGTTCTTTCTGCAGACTAAC +
Preference number: 5 (lower is better)
Translates to: LIVSSLFFLQTNLPHLDVLIVSS*FFLQTN
Trigger: GTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG...GACATCCAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642261.1
ENST00000642811.1
ENST00000643275.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTTCCAAAATCCGTTTTaGGGAGGTATCAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFFQNPF*GGIKPL
Trigger: CAGAGGCTTGATACCTCCCAAAAACGGATTTTGGAA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TCAGACTGGATACATTTTTCCAATACTTGTTGCGGGTCGGTTTTAAAGCATGTACCTCTTGCCTGGAGTTaGACATCCTCTAGATATTTC +
Preference number: 5 (lower is better)
Translates to: SDWIHFSNTCCGSVLKHVPLAWS*TSSRYF
Trigger: GAAATATCTAGAGGATGTCAAACTCCAGGCAAGAGG...TACATGCTTTAAAACCGACCCGCAACAAGTATTGGAAAAATGTATCCAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAGACCACAGTTCTTAGGCTTCTAGCGTTTCTTTCAGGAGCACTTGTTGAGTTTACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: QTTVLRLLAFLSGALVEFTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...AAACTCAACAAGTGCTCCTGAAAGAAACGCTAGAAGCCTAAGAACTGTGGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTCTTTGCAGAAACTCTTaGGACCTTCAGAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFLCRNS*DLQSLS
Trigger: AGAAAGGCTCTGAAGGTCCAAAGAGTTTCTGCAAAG...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGGCATTTCAATGCCAGATCCAAAAACCGTTCTGCATTCAGTCAGCTGTCCAAACTTCCCTTTCTAAGTTaGTTCACGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RHFNARSKNRSAFSQLSKLPFLS*FTFSFS
Trigger: AGAAAAGGAAAACGTGAACAAACTTAGAAAGGGAAG...TTTGGACAGCTGACTGAATGCAGAACGGTTTTTGGATCTGGCATTGAAATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGCCTACATTTTTAGGTaGGGCACCTTCAACATGACT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFAYIFR*GTFNMT
Trigger: AGTCATGTTGAAGGTGCCCAACCTAAAAATGTAGGC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAAAACTATGTGTGCTGTaGCAAATGGGGACGGCCCAA +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKKLCVL*QMGTAQ
Trigger: TTGGGCCGTCCCCATTTGCAACAGCACACATAGTTT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTAGGTATGCTCTACTATTaGGTAGAAATTCACATTGGC +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLGMLYY*VEIHIG
Trigger: GCCAATGTGAATTTCTACCAAATAGTAGAGCATACC...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp GGTTTCAAGGTAGACTCTGCCCTTAACGCTTATTGTACTAATACCTTTGCCCAGGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: GFKVDSALNAYCTNTFAQESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...CTGGGCAAAGGTATTAGTACAATAAGCGTTAAGGGCAGAGTCTACCTTGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CTGCAATGCAACAAACTACCTGGTCTAATTGAGAGCCAACCCAGTTATCTGAACGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: LQCNKLPGLIESQPSYLNESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...GTTCAGATAACTGGGTTGGCTCTCAATTAGACCAGGTAGTTTGTTGCATTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AGCTTTGAAACGTGCATTCACACCTCCTGTTCTGTGCCAACAATATGCAAGTTATCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SFETCIHTSCSVPTICKLSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...TAACTTGCATATTGTTGGCACAGAACAGGAGGTGTGAATGCACGTTTCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCTTCCTTTTCCACCAGTaGTACCAAAGACTTTACTGT +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSFLFHQ*YQRLYC
Trigger: ACAGTAAAGTCTTTGGTACAACTGGTGGAAAAGGAA...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642617.1
ENST00000642627.1
ENST00000644097.1
ENST00000644255.1
CDS TCA 90 bp GGTCTACCTAGTATAGTGCCAAATATCTGTACATCAAGGTTCTCATaGGCACTAGGGTTTCAGATCTCGTTTCCACCAAGTTCATTATTA +
Preference number: 5 (lower is better)
Translates to: GLPSIVPNICTSRFS*ALGFQISFPPSSLL
Trigger: TAATAATGAACTTGGTGGAAACGAGATCTGAAACCCTAGTGCTCATGAGAACCTTGATGTACAGATATTTGGCACTATACTAGGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645346.1
ENST00000646831.1
CDS GCA 90 bp AGAAAGGAAACACTTTACACCTACTCTCTACCAACTACCATTAGGTaGTTTCAGTGTGAGTTAACTTCAAAGCAACCCAATAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: RKETLYTYSLPTTIR*FQCELTSKQPNRRN
Trigger: GTTTCTCCTATTGGGTTGCTTTGAAGTTAACTCACACTGAAAGCACCTAATGGTAGTTGGTAGAGAGTAGGTGTAAAGTGTTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642617.1
ENST00000642627.1
ENST00000642811.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000646391.1
ENST00000646625.1
ENST00000647279.1
CDS-3UTR CAA 90 bp GTCAGAATTCTATCTGGCATAATTAGGCTTCTCAAAGTGAGGCTTGCAAGTGAGACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: VRILSGIIRLLKVRLASETSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...CTCACTTGCAAGCCTCACTTTGAGAAGCCTAATTATGCCAGATAGAATTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS-3UTR CAA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATTGCTCCATCATTGGCTaGACCACTTCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHCSIIG*TTSSKV
Trigger: GACTTTTGAAGAAGTGGTCAAGCCAATGATGGAGCA...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
CDS-3UTR CAA 90 bp CAGCCAGAATATAGGAAGTTCCACTTAATAAAAACACAAAAGCCTTTCCTGATGGTGGTATCTGAGTGCTaGTTCTGCAGTTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: QPEYRKFHLIKTQKPFLMVVSEC*FCSCSK
Trigger: TTTGGAACAACTGCAGAACAAGCACTCAGATACCAC...CATCAGGAAAGGCTTTTGTGTTTTTATTAAGTGGAACTTCCTATATTCTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAATTTCCACACATGAACTaGCACTCAGACCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKFPHMN*HSDPGN
Trigger: GTTTCCAGGGTCTGAGTGCAAGTTCATGTGTGGAAA...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ACCTCCTGTTCTGTGCCAACAATATGCAAGTTAACACTGATTGACCATCATTCCACTCAAAGATTAAATTaGGCCTCATATTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: TSCSVPTICKLTLIDHHSTQRLN*ASYCTG
Trigger: ACCTGTGCAATATGAGGCCAAATTTAATCTTTGAGT...GGAATGATGGTCAATCAGTGTTAACTTGCATATTGTTGGCACAGAACAGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000642811.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTATTGTACTAATACCTTaGCCCAGGACTGAATTGCCT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFIVLIP*PRTELP
Trigger: AGGCAATTCAGTCCTGGGCAAAGGTATTAGTACAAT...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000643875.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGAAATTCACATTGGCTaGTCACAGCACACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFEIHIG*SQHTSV
Trigger: AACTGAAGTGTGCTGTGACAAGCCAATGTGAATTTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTACGCAGAACTTTTGTTaGCTCTTCGGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFTQNFC*LFGSFL
Trigger: AAGGAAAGAACCGAAGAGCAAACAAAAGTTCTGCGT...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp AATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCCATTACGCAGAACTTTaGTTTGCTCTTCGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NLRSPIQTPGLSFSEPHTHYAEL*FALRFF
Trigger: AAAGAACCGAAGAGCAAACAAAAGTTCTGCGTAATG...GGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MLLGLRRESLDLLTRADFSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS TCA 90 bp AAAGAAGGCCCATGTGTGATGGAGAAGTTAGTGACAGGAAGTATCTaGACAGCTACTATTAAAATTCAATTCCCACCTCATTCACTAACA +
Preference number: 5 (lower is better)
Translates to: KEGPCVMEKLVTGSI*TATIKIQFPPHSLT
Trigger: TGTTAGTGAATGAGGTGGGAATTGAATTTTAATAGTAGCTGTTCAGATACTTCCTGTCACTAACTTCTCCATCACACATGGGCCTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAAATGATGGGCTGTCTTaGGCAATGCCACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKNDGLS*AMPPQK
Trigger: TTTTTGAGGTGGCATTGCCAAAGACAGCCCATCATT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATGCTTTTAGGATTGAGGCGGGAAAGTTTAGACCTTTTGACAAGAGCTGACTTTACATTTTTCCAATACTaGTTGCGGGTCGGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: MLLGLRRESLDLLTRADFTFFQY*LRVGFK
Trigger: TTTAAAACCGACCCGCAACAAGTATTGGAAAAATGT...AAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTCCCGCCTCAATCCTAAAAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CAACTTCTCCATCTAAGAAATGACCTTGACCTTCCTACCTTTGGGTTTGTTTTTTCCCATTCACTAAGATaGTACCATTTTATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QLLHLRNDLDLPTFGFVFSHSLR*YHFILQ
Trigger: CTGCAGGATAAAATGGTACAATCTTAGTGAATGGGA...AAAAACAAACCCAAAGGTAGGAAGGTCAAGGTCATTTCTTAGATGGAGAAGTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAACAGACTGTGGAATCATaGGTAGCATGGTTATCAACA +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKQTVES*VAWLST
Trigger: TGTTGATAACCATGCTACCAATGATTCCACAGTCTG...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS-3UTR CAA 90 bp CCAAACCTAACTACTGACTCTGGAGTTCTTTGCAACATGAAAGCCTACATTTTTGAAAGTTTAGACCTTTaGACAAGAGCTGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: PNLTTDSGVLCNMKAYIFESLDL*TRADFL
Trigger: AAGAAAGTCAGCTCTTGTCAAAAGGTCTAAACTTTC...AAAAATGTAGGCTTTCATGTTGCAAAGAACTCCAGAGTCAGTAGTTAGGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000545250.5
ENST00000642627.1
ENST00000643625.1
ENST00000644097.1
ENST00000644184.1
ENST00000646625.1
CDS-3UTR CAA 90 bp ATAAATCTAAGATCTCCAATTCAAACACCTGGGTTATCCTTTTCTGAGCCTCATACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: INLRSPIQTPGLSFSEPHTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...ATGAGGCTCAGAAAAGGATAACCCAGGTGTTTGAATTGGAGATCTTAGATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642811.1
ENST00000644255.1
ENST00000646391.1
ENST00000647279.1
CDS-3UTR CAA 90 bp TTAAACACAAGCAACTGCCTTGACATTTTAGAACATTCTAAGAAGGACAGCAAAACGTCAGTGTCCATCTaGAGACATTTTAGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: LNTSNCLDILEHSKKDSKTSVSI*RHFSKE
Trigger: TTCTTTACTAAAATGTCTCAAGATGGACACTGACGT...TTTGCTGTCCTTCTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298552.9
ENST00000440111.6
ENST00000642627.1
ENST00000644097.1
ENST00000646625.1
CDS TCA 72 bp CGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTaGAAGGGCCAAGGCCGACGGCGGCCTCCGCCACGA +
Preference number: 6 (lower is better)
Translates to: RRHLGRTAPPPS*KGQGRRRPPPR
Trigger: TCGTGGCGGAGGCCGCCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642249.1
ENST00000642854.1
ENST00000644097.1
CDS CAA 72 bp CCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: PHSPSSLQGAAI*DVQHLPRRERA
Trigger: GGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642249.1
CDS CCA 72 bp CTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTaGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCA +
Preference number: 6 (lower is better)
Translates to: LTVPPAYRAPPS*TYSTSPVVKGP
Trigger: TGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642249.1
ENST00000642854.1
ENST00000644097.1
CDS CAA 72 bp ACTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: THSPSSLQGAAI*DVQHLPRRERA
Trigger: GGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642854.1
ENST00000644097.1
CDS CCA 72 bp GGGCGGAAAGCTGCGGGCCAGGGCAGCCCTCCTTCCTaGGCTAAACATTTTCAGAAGCCCGCCTCCGGGATT +
Preference number: 6 (lower is better)
Translates to: GRKAAGQGSPPS*AKHFQKPASGI
Trigger: AATCCCGGAGGCGGGCTTCTGAAAATGTTTAGCCCAGGAAGGAGGGCTGCCCTGGCCCGCAGCTTTCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646440.1
CDS CAA 90 bp TTCATGGTCACTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: FMVTHSPSSLQGAAI*DVQHLPRRERAKAD
Trigger: GTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGTGACCATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642854.1
ENST00000644097.1
CDS CAA 90 bp AGCTGTTTACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTaGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: SCLPHSPSSLQGAAI*DVQHLPRRERAKAD
Trigger: GTCGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGGTAAACAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642249.1
CDS CCA 72 bp CGTCGTCCCGCACACCCAGCATGGGGGAGTCCAGCATaGCAAGAAGCTCCCCGACATTTGCTTGTTGGGCCA +
Preference number: 6 (lower is better)
Translates to: RRPAHPAWGSPA*QEAPRHLLVGP
Trigger: TGGCCCAACAAGCAAATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCATGCTGGGTGTGCGGGACGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000440111.6
ENST00000475903.6
ENST00000490179.3
ENST00000545250.5
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CAA 90 bp CACCCAGCATGGGGGAGTCCAGCATGGCAAGAAGCTCCCCGACATTaGCTTGTTGGGCCATTCTCTCGCTCGAAGGCGCTGTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: HPAWGSPAWQEAPRH*LVGPFSRSKALCWL
Trigger: GAGCCAGCACAGCGCCTTCGAGCGAGAGAATGGCCCAACAAGCAAATGTCGGGGAGCTTCTTGCCATGCTGGACTCCCCCATGCTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000440111.6
ENST00000475903.6
ENST00000490179.3
ENST00000545250.5
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CAA 90 bp CATGGAGAGGCAGCTACTCAAGGTCCCAAACAGCACAAGGACTCCTaGGAGGCCGCCCATCTAGGCTTCTCTCAGGAGATGGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: HGEAATQGPKQHKDS*EAAHLGFSQEMAQA
Trigger: TGCCTGGGCCATCTCCTGAGAGAAGCCTAGATGGGCGGCCTCCAAGGAGTCCTTGTGCTGTTTGGGACCTTGAGTAGCTGCCTCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 72 bp GCGCTGTGCTGGCTCCAGGACGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCCACTACCAAACCACCG +
Preference number: 6 (lower is better)
Translates to: ALCWLQDVCYRF*RFFIGATTKPP
Trigger: CGGTGGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475903.6
CDS CCA 72 bp CTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACTGGGAAGGGGCGGAAAGCTGCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LQFPVLSTWCLS*SLGRGGKLRAR
Trigger: CCTGGCCCGCAGCTTTCCGCCCCTTCCCAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646440.1
CDS CAA 90 bp ATCATGGCAGCATTATGTTCCTCCAGAGCTGCTGCTTTGATCACCTaGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGCTGCCTCTTA +
Preference number: 6 (lower is better)
Translates to: IMAALCSSRAAALIT*RRSRLFRRACCCLL
Trigger: TAAGAGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS CAA 90 bp CTTCAACTGATCATGGCAGCATTATGTTCCTCCAGAGCTGCTGCTTaGATCACCTTGCGGAGGAGCCGCCTGTTCCGGAGGGCATGCTGC +
Preference number: 6 (lower is better)
Translates to: LQLIMAALCSSRAAA*ITLRRSRLFRRACC
Trigger: GCAGCATGCCCTCCGGAACAGGCGGCTCCTCCGCAAGGTGATCAAAGCAGCAGCTCTGGAGGAACATAATGCTGCCATGATCAGTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642261.1
CDS TCA 72 bp GCCTGGCTCCTCGATGCTGTCCCTGAATGGCCAACTTaGCCAACCTGGAACTCACCTGCCTCACAACCTCTT +
Preference number: 6 (lower is better)
Translates to: AWLLDAVPEWPT*PTWNSPASQPL
Trigger: AAGAGGTTGTGAGGCAGGTGAGTTCCAGGTTGGTCAAGTTGGCCATTCAGGGACAGCATCGAGGAGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp AGCTTGTTCAGCTCCTTGCTGTGCGCGTCTGCTCCCTaGTGTATCAGTCTGTCCAGCACTTCCATTGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLFSSLLCASAP*CISLSSTSIGE
Trigger: CTCCCCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGAACAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS CCA 72 bp CCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATTaGGGCCACTACCAAACCACCGTCTCCTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: PGRVLQVLKVLH*GHYQTTVSSPS
Trigger: TGAGGGGGAGGAGACGGTGGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475903.6
CDS CCA 72 bp CTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACTCACAGTCCCTCCAGCCTACAGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: LQFPVLSTWCLS*SLTVPPAYRAP
Trigger: CGGCGCCCTGTAGGCTGGAGGGACTGTGAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000642811.1
ENST00000642854.1
ENST00000643691.1
ENST00000644097.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000646625.1
CDS CAA 72 bp TCCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATaGGGGCCACTACCAAACCACCGTCTCCTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: SRTCATGSEGSS*GPLPNHRLLPL
Trigger: GAGGGGGAGGAGACGGTGGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475903.6
CDS CAA 72 bp GGCAGTCGGTATTCCACCTGGGAAAGACTAGGCAGTTaGGGTGGCATGCTGCCACATGCCAGTGTCACTCAG +
Preference number: 6 (lower is better)
Translates to: GSRYSTWERLGS*GGMLPHASVTQ
Trigger: CTGAGTGACACTGGCATGTGGCAGCATGCCACCCAAACTGCCTAGTCTTTCCCAGGTGGAATACCGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644882.1
ENST00000647262.1
CDS CAA 72 bp GCAGCTACTCAAGGTCCCAAACAGCACAAGGACTCCTaGGAGGCCGCCCATCTAGGCTTCTCTCAGGAGATG +
Preference number: 6 (lower is better)
Translates to: AATQGPKQHKDS*EAAHLGFSQEM
Trigger: CATCTCCTGAGAGAAGCCTAGATGGGCGGCCTCCAAGGAGTCCTTGTGCTGTTTGGGACCTTGAGTAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 72 bp GCGCTGTGCTGGCTCCAGGACGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCCACTACCAAACTGTTC +
Preference number: 6 (lower is better)
Translates to: ALCWLQDVCYRF*RFFIGATTKLF
Trigger: GAACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCACAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS GCA 72 bp CTGTGGGGACATCATTGTGTCTGCCTGTCATATCTGTaGCTGTGGCACACACCTGGCAACCATGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LWGHHCVCLSYL*LWHTPGNHECS
Trigger: GCTGCACTCATGGTTGCCAGGTGTGTGCCACAGGCACAGATATGACAGGCAGACACAATGATGTCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 72 bp GCGCTGTGCTGGCTCCAGGACGTGTGCTACAGGTTCTaGAGGTTCTTCATTGGGGCCACTACCAAACTACTA +
Preference number: 6 (lower is better)
Translates to: ALCWLQDVCYRF*RFFIGATTKLL
Trigger: TAGTAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCACAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490179.3
ENST00000642646.1
CDS TCA 72 bp GTCATATCTGTGCCTGTGGCACACACCTGGCAACCATaGGTGCAGCTAGCTGGAAGACAAGGTCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: VISVPVAHTWQP*VQLAGRQGLQD
Trigger: ATCCTGCAGACCTTGTCTTCCAGCTAGCTGCACTCATGGTTGCCAGGTGTGTGCCACAGGCACAGATATGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp CAAACACCTGGGTTATCCTTTTCTGAGCCTCATACCTaGTCTCTGCGGCCTGCAGCTGTCCTCTGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: QTPGLSFSEPHT*SLRPAAVLWSL
Trigger: CAAACTCCAGAGGACAGCTGCAGGCCGCAGAGAGCAGGTATGAGGCTCAGAAAAGGATAACCCAGGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644882.1
CDS GCA 72 bp ACTGGTTGTGCAGTAAAAGCAACTGGTCTCGGAGGGTaGGGATCTCATCTCCAAAGTGGGTCCAGTCGACAG +
Preference number: 6 (lower is better)
Translates to: TGCAVKATGLGG*GSHLQSGSSRQ
Trigger: CTGTCGACTGGACCCACTTTGGAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCACAACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000643583.1
CDS GCA 72 bp AGATGCTCTCCTCTTCTGTGGGGACATCATTGTGTCTaGCTGTCATATCTGTGCCTGTGGCACACACCTGGC +
Preference number: 6 (lower is better)
Translates to: RCSPLLWGHHCV*LSYLCLWHTPG
Trigger: GCCAGGTGTGTGCCACAGGCACAGATATGACAGGCAGACACAATGATGTCCCCACAGAAGAGGAGAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 72 bp CTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACCACCGTCTCCTCCCCCTCAGCTGTTTACC +
Preference number: 6 (lower is better)
Translates to: LQFPVLSTWCLS*SPPSPPPQLFT
Trigger: GGTAAACAGCTGAGGGGGAGGAGACGGTGGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000490179.3
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000643072.1
ENST00000643583.1
ENST00000644255.1
ENST00000644997.1
ENST00000645904.1
ENST00000646391.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CCA 72 bp AATGCAGGCAGCCCCAGAGCCTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: NAGSPRACSSDN*YFSFQCCQPGV
Trigger: GACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGGCTCTGGGGCTGCCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490179.3
CDS CCA 72 bp CGACAACTGGTACTTCAGTTTCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACGTCTCCTCCCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RQLVLQFPVLST*CLSWSRLLPLS
Trigger: GCTGAGGGGGAGGAGACGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643875.1
CDS CAA 72 bp GACAACGACGTCAGTGTCCATCTTGTCATGTGGCTCTaGCAAGGTGGTCAGGATGTGCAATGCCGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: DNDVSVHLVMWL*QGGQDVQCRLR
Trigger: TCTCAGCCGGCATTGCACATCCTGACCACCTTGCAAGAGCCACATGACAAGATGGACACTGACGTCGTTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545250.5
ENST00000643072.1
ENST00000643362.1
ENST00000645129.1
CDS CAA 72 bp CCCAGGCACGTTTCAGCAGCTTTTTCAGGAGCTCTCTaGTGCCTCGGATCTGTTTCTCCCCCTTTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: PRHVSAAFSGAL*CLGSVSPPFCS
Trigger: GGAACAGAAAGGGGGAGAAACAGATCCGAGGCACAAGAGAGCTCCTGAAAAAGCTGCTGAAACGTGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp ACTGGTTGTGCAGTAAAAGCAACTGGTCTCGGAGGGTaGGGATCTCATCTGAAGGAGGAGAGCTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: TGCAVKATGLGG*GSHLKEESLFS
Trigger: GCTGAACAAGCTCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCACAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643275.1
CDS GCA 72 bp AGGCACGTTTCAGCAGCTTTTTCAGGAGCTCTCTTGTaGCTCGGATCTGTTTCTCCCCCTTTCTGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: RHVSAAFSGALL*LGSVSPPFCSQ
Trigger: CTGGGAACAGAAAGGGGGAGAAACAGATCCGAGGCACAAGAGAGCTCCTGAAAAAGCTGCTGAAACGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp ACCAAAGGAGATAATGACTGCCAAGCACTTTCACAGTaGCCACCGTCTCCTCCCCCTCAGCTGTTTACCTCA +
Preference number: 6 (lower is better)
Translates to: TKGDNDCQALSQ*PPSPPPQLFTS
Trigger: TGAGGTAAACAGCTGAGGGGGAGGAGACGGTGGGCACTGTGAAAGTGCTTGGCAGTCATTATCTCCTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS GCA 72 bp CTTCTCTTTGTCGTGAGGACCAAAGGAGATAATGACTaGCAAGCACTTTCACAGTGCCCACCGTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LLFVVRTKGDND*QALSQCPPSPP
Trigger: GGGAGGAGACGGTGGGCACTGTGAAAGTGCTTGGCAGTCATTATCTCCTTTGGTCCTCACGACAAAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS CCA 72 bp TCTCATCTCCAAAGTGGGTCCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: SHLQSGSSRQTC*VKATCSAPCCA
Trigger: CGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000643583.1
CDS CCA 72 bp CTCCATGACCTCATCCTGCAGGAATGCATTCTGCCATaGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTG +
Preference number: 6 (lower is better)
Translates to: LHDLILQECILP*RRAAISRAHQL
Trigger: CAGTTGATGAGCTCTGCTTATGGCTGCTCTCCTCCATGGCAGAATGCATTCCTGCAGGATGAGGTCATGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643362.1
CDS CCA 72 bp CTTCAGTTTCCAGTGCTGTCAACCTGGTGTCTTTCATaGTCACGTCTCCTCCCCCTCAGCTGTTTACCTCAC +
Preference number: 6 (lower is better)
Translates to: LQFPVLSTWCLS*SRLLPLSCLPH
Trigger: GTGAGGTAAACAGCTGAGGGGGAGGAGACGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643875.1
CDS CCA 72 bp CGACAACTGGTACTTCAGTTTCCAGTGCTGTCAACCTaGTGTCTTTCATGGTCACTGGGAAGGGGCGGAAAG +
Preference number: 6 (lower is better)
Translates to: RQLVLQFPVLST*CLSWSLGRGGK
Trigger: CTTTCCGCCCCTTCCCAGTGACCATGAAAGACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646440.1
CDS CAA 72 bp CGGATCTCATCTCCAAAGTGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RISSPKWVQSTD*LGKGNLFSSLL
Trigger: CAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGATGAGATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000643583.1
CDS CAA 90 bp AAAAGAAATGGCAGTCGGTATTCCACCTGGGAAAGACTAGGCAGTTaGGGTGGCATGCTGCCACATGCCAGTGTCACTCAGAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: KRNGSRYSTWERLGS*GGMLPHASVTQREE
Trigger: CTCCTCTCTCTGAGTGACACTGGCATGTGGCAGCATGCCACCCAAACTGCCTAGTCTTTCCCAGGTGGAATACCGACTGCCATTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644882.1
ENST00000647262.1
CDS CAA 90 bp AGGAGATGGCCCAGGCACGTTTCAGCAGCTTTTTCAGGAGCTCTCTaGTGCCTCGGATCTGTTTCTCCCCCTTTCTGTTCCCAGTCATTA +
Preference number: 6 (lower is better)
Translates to: RRWPRHVSAAFSGAL*CLGSVSPPFCSQSL
Trigger: TAATGACTGGGAACAGAAAGGGGGAGAAACAGATCCGAGGCACAAGAGAGCTCCTGAAAAAGCTGCTGAAACGTGCCTGGGCCATCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CAA 90 bp TGTGCTGGCTCCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGTTCTAGCGACAACTGGTACTTCAGT +
Preference number: 6 (lower is better)
Translates to: CAGSRTCATGSEGSS*GPLPNCSSDNWYFS
Trigger: ACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGAGCCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CAA 90 bp AACGCTTTCCCCACTAAGGTCTGGCTCCCGAGCCCTGGCATACCTTaGTGGTATCTGAGTGCTTGTTCTGCAGTTGTTCCAAATAGAGCT +
Preference number: 6 (lower is better)
Translates to: NAFPTKVWLPSPGIP*WYLSACSAVVPNRA
Trigger: AGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCACAAAGGTATGCCAGGGCTCGGGAGCCAGACCTTAGTGGGGAAAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 72 bp TCTGGCTCCCGAGCCCTGGCATACCTTTGTGGTATCTaGGTGCTTGTTCTGCAGTTGTTCCAAATAGAGCTC +
Preference number: 6 (lower is better)
Translates to: SGSRALAYLCGI*VLVLQLFQIEL
Trigger: GAGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCACAAAGGTATGCCAGGGCTCGGGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp CCAAGAACCAACAGCTGCCTGTTCAAGAACTCCATCTaGTGCTGGACCGACTCACTGTTTGAGAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: PRTNSCLFKNSI*CWTDSLFESLL
Trigger: CAACAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644184.1
ENST00000644882.1
CDS GCA 72 bp GGATCTCATCTCCAAAGTGGGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: GSHLQSGSSRQT*WVKATCSAPCC
Trigger: ACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGATGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642627.1
ENST00000643583.1
CDS CCA 72 bp AAAGATGGCGCCCATCCAGTCAACTTGGCGATAGTGTaGGCTAATCAGCTTGGGCCACCTAGCTTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: KDGAHPVNLAIV*ANQLGPPSLFF
Trigger: GAAAAACAAGCTAGGTGGCCCAAGCTGATTAGCCCACACTATCGCCAAGTTGACTGGATGGGCGCCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS CCA 72 bp ATCTTTCTCCAAAGTGGGTCCAGTCGACAGACTTGCTaGGTAAAGGCAACTTGTTCAGCTCCTTGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: IFLQSGSSRQTC*VKATCSAPCCA
Trigger: CGCACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS CAA 72 bp TCCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTGTTCTAGCGACAACTGG +
Preference number: 6 (lower is better)
Translates to: SRTCATGSEGSS*GPLPNCSSDNW
Trigger: CCAGTTGTCGCTAGAACAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CAA 72 bp CCCAGTAACGAGAGGATGGATAAACGAGTGGCGGCTTaGCCCACATATTCGTTAATCCTGTCCAAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: PSNERMDKRVAA*PTYSLILSKRC
Trigger: GCACCTCTTGGACAGGATTAACGAATATGTGGGCAAAGCCGCCACTCGTTTATCCATCCTCTCGTTACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 27 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000440111.6
ENST00000475903.6
ENST00000490179.3
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642646.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643583.1
ENST00000643691.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CAA 72 bp CAGATCCCAGCAGTTCCAGTCCTGGCTCAGATACAATaGGGGTGTGAACTTAGGCAAAGTACCCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: QIPAVPVLAQIQ*GCELRQSTLLS
Trigger: AGAGAGCAGGGTACTTTGCCTAAGTTCACACCCCAATTGTATCTGAGCCAGGACTGGAACTGCTGGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645346.1
ENST00000646831.1
CDS TCA 72 bp TTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTGCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: LVAWLSTPRRLL*GQRRQCPSAGE
Trigger: TTCTCCTGCAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS TCA 72 bp CTCAATAACCAACAGTCCCAAACTGTGATAGGTTACTaGAGCCATGAGGGGATCCTGCTGGAAGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: LNNQQSQTVIGY*SHEGILLEAAT
Trigger: AGTGGCTGCTTCCAGCAGGATCCCCTCATGGCTTCAGTAACCTATCACAGTTTGGGACTGTTGGTTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS GCA 72 bp AGAACCAACAGCTGCCTGTTCAAGAACTCCATCTGCTaGTGGACCGACTCACTGTTTGAGAGCTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RTNSCLFKNSIC*WTDSLFESLLL
Trigger: CAACAACAAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644184.1
ENST00000644882.1
CDS GCA 72 bp CTGATCTTTCTCCAAAGTGGGTCCAGTCGACAGACTTaGTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: LIFLQSGSSRQT*WVKATCSAPCC
Trigger: ACAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGAAAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS CCA 72 bp TCATTGGGGCCACTACCAAACTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: SLGPLPNCSSDN*YFSFQCCQPGV
Trigger: GACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTTGGTAGTGGCCCCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000298552.9
ENST00000403810.6
ENST00000642344.1
ENST00000642617.1
ENST00000642627.1
ENST00000642745.1
ENST00000642811.1
ENST00000642854.1
ENST00000643072.1
ENST00000643362.1
ENST00000643583.1
ENST00000643875.1
ENST00000644097.1
ENST00000644255.1
ENST00000644997.1
ENST00000645129.1
ENST00000645150.1
ENST00000645901.1
ENST00000645904.1
ENST00000646391.1
ENST00000646440.1
ENST00000646625.1
ENST00000647078.1
ENST00000647279.1
ENST00000647462.1
ENST00000647506.1
CDS CCA 72 bp GGAGAAAAGGTCAAACAGGAAACGTCTGTCAGGCACTaGCACCAGGATCGGCATTGTACAGTACATGAAGAG +
Preference number: 6 (lower is better)
Translates to: GEKVKQETSVRH*HQDRHCTVHEE
Trigger: CTCTTCATGTACTGTACAATGCCGATCCTGGTGCCAGTGCCTGACAGACGTTTCCTGTTTGACCTTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS CAA 72 bp ACTGATCTTTCTCCAAAGTGGGTCCAGTCGACAGACTaGCTGGGTAAAGGCAACTTGTTCAGCTCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: TDLSPKWVQSTD*LGKGNLFSSLL
Trigger: CAGCAAGGAGCTGAACAAGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGAAAGATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643625.1
CDS CAA 72 bp TCCATCACATCACCCACAGAAGGGCAAAACTGTCCTTaGTTACTCCAACACTTCTGGGCCTCTACTGCCATC +
Preference number: 6 (lower is better)
Translates to: SITSPTEGQNCP*LLQHFWASTAI
Trigger: GATGGCAGTAGAGGCCCAGAAGTGTTGGAGTAACAAAGGACAGTTTTGCCCTTCTGTGGGTGATGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS CAA 90 bp ACCAAGACGCCTTCAGCACAAATGCATCTAAAAAGGGTAAGATACTaGCTCCCATTCTCTCTTCCTATCAGTGCCGTCTCCTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: TKTPSAQMHLKRVRY*LPFSLPISAVSSPS
Trigger: TGAGGGGGAGGAGACGGCACTGATAGGAAGAGAGAATGGGAGCAAGTATCTTACCCTTTTTAGATGCATTTGTGCTGAAGGCGTCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642249.1
CDS TCA 72 bp TTGGTAGCATGGTTATCAACACCAAGACGCCTGTTGTaGGGACAACGACGTCAGTGTCCATCTTGTCATGTG +
Preference number: 6 (lower is better)
Translates to: LVAWLSTPRRLL*GQRRQCPSCHV
Trigger: CACATGACAAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545250.5
ENST00000643072.1
ENST00000643362.1
ENST00000645129.1
CDS TCA 72 bp GGAGGTGTTAACAGTGGCTGCCTCTTCTCTTTGTCGTaGGGACCAAAGGAGATAATGACTGCCAAGCACTTT +
Preference number: 6 (lower is better)
Translates to: GGVNSGCLFSLS*GPKEIMTAKHF
Trigger: AAAGTGCTTGGCAGTCATTATCTCCTTTGGTCCTCACGACAAAGAGAAGAGGCAGCCACTGTTAACACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS CCA 72 bp CCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATTaGGGCCACTACCAAACTACTATTTGTCTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: PGRVLQVLKVLH*GHYQTTICLGR
Trigger: TCTCCCTAGACAAATAGTAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490179.3
ENST00000642646.1
CDS CCA 72 bp AGAAGTTGGAGGAGTGGTCATACCACAAACCATAGATaGGCTCCAAAGAGTAGCCAGAAAGCAGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RSWRSGHTTNHR*APKSSQKAEER
Trigger: TCTCTCCTCTGCTTTCTGGCTACTCTTTGGAGCCCATCTATGGTTTGTGGTATGACCACTCCTCCAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647078.1
CDS CCA 72 bp GAAACTCTGGAGCAGGTTAACTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: ETLEQVNCSSDN*YFSFQCCQPGV
Trigger: GACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGTTAACCTGCTCCAGAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS CCA 72 bp TCAAAGCAACCCAATAGGAGAAACAAGCTCACATGGTaGCTGGAAAGTGCTTGTATAGCTGGACCACGGAGT +
Preference number: 6 (lower is better)
Translates to: SKQPNRRNKLTW*LESACIAGPRS
Trigger: ACTCCGTGGTCCAGCTATACAAGCACTTTCCAGCCACCATGTGAGCTTGTTTCTCCTATTGGGTTGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 72 bp TTGCTGAGGAATAGGAAGAGATGCTCTCCTCTTCTGTaGGGACATCATTGTGTCTGCCTGTCATATCTGTGC +
Preference number: 6 (lower is better)
Translates to: LLRNRKRCSPLL*GHHCVCLSYLC
Trigger: GCACAGATATGACAGGCAGACACAATGATGTCCCCACAGAAGAGGAGAGCATCTCTTCCTATTCCTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 72 bp TTAATCCTGTCCAAGAGGTGCTGTTCTAGCGACAACTaGTACTTCAGTTTCCAGTGCTGTCAACCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: LILSKRCCSSDN*YFSFQCCQPGV
Trigger: GACACCAGGTTGACAGCACTGGAAACTGAAGTACCAGTTGTCGCTAGAACAGCACCTCTTGGACAGGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643691.1
CDS CAA 72 bp TCCAGGACGTGTGCTACAGGTTCTGAAGGTTCTTCATaGGGGCCACTACCAAACTACTATTTGTCTAGGGAG +
Preference number: 6 (lower is better)
Translates to: SRTCATGSEGSS*GPLPNYYLSRE
Trigger: CTCCCTAGACAAATAGTAGTTTGGTAGTGGCCCCAATGAAGAACCTTCAGAACCTGTAGCACACGTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490179.3
ENST00000642646.1
CDS CAA 72 bp TCAATTTTAAACAAAGATGGCGCCCATCCAGTCAACTaGGCGATAGTGTGGGCTAATCAGCTTGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: SILNKDGAHPVN*AIVWANQLGPP
Trigger: AGGTGGCCCAAGCTGATTAGCCCACACTATCGCCAAGTTGACTGGATGGGCGCCATCTTTGTTTAAAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS TCA 72 bp ATTTGGCCTGACAAAAGGCAGCCAGTTTGCAGCTCATaGAAAAGGACCCTACAATACACGCATGCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: IWPDKRQPVCSS*KRTLQYTHAER
Trigger: CCTTTCTGCATGCGTGTATTGTAGGGTCCTTTTTCATGAGCTGCAAACTGGCTGCCTTTTGTCAGGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS CAA 90 bp TCTGTGTCTTCCATCACATCACCCACAGAAGGGCAAAACTGTCCTTaGTTACTCCAACACTTCTGGGCCTCTACTGCCATCATATTTACT +
Preference number: 6 (lower is better)
Translates to: SVSSITSPTEGQNCP*LLQHFWASTAIIFT
Trigger: AGTAAATATGATGGCAGTAGAGGCCCAGAAGTGTTGGAGTAACAAAGGACAGTTTTGCCCTTCTGTGGGTGATGTGATGGAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS TCA 72 bp CATACCAGTTGTACCAAAGACTTTACTGTAAGGGTGTaGCAGATCAGGTGGGACATTTCCAGGAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: HTSCTKDFTVRV*QIRWDISRRSW
Trigger: CCAACTTCTCCTGGAAATGTCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000644319.1
ENST00000645901.1
ENST00000647506.1
CDS TCA 72 bp GTGCCCAGCCCTAGTTTGGTTTTTGTTGTCTACAATTaGAGGCATCCTGACTATCACAACTCAGCTGCATCA +
Preference number: 6 (lower is better)
Translates to: VPSPSLVFVVYN*RHPDYHNSAAS
Trigger: TGATGCAGCTGAGTTGTGATAGTCAGGATGCCTTCAATTGTAGACAACAAAAACCAAACTAGGGCTGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp CCACGGAACTCTGATAGCAAAGAACAAGCGGGACCATaGCAGCCCAAGTCTGAAACAATTCTAGTACATAAA +
Preference number: 6 (lower is better)
Translates to: PRNSDSKEQAGP*QPKSETILVHK
Trigger: TTTATGTACTAGAATTGTTTCAGACTTGGGCTGGCATGGTCCCGCTTGTTCTTTGCTATCAGAGTTCCGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644319.1
CDS GCA 72 bp CTACATCCGGCCGAAAAAGACTCTTTACAAAGCACATaGCCAAGAAACCCAAAAAGAAGGCCCATGTGTGAT +
Preference number: 6 (lower is better)
Translates to: LHPAEKDSLQST*PRNPKRRPMCD
Trigger: ATCACACATGGGCCTTCTTTTTGGGTTTCTTGGGCATGTGCTTTGTAAAGAGTCTTTTTCGGCCGGATGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS GCA 72 bp CTTCCAAATAGTTGGCACTGTAGGCATGTGTCACCGTaGCCAGCCCTAGTTTGGTTTTTGTTGTCTACAATT +
Preference number: 6 (lower is better)
Translates to: LPNSWHCRHVSP*PALVWFLLSTI
Trigger: AATTGTAGACAACAAAAACCAAACTAGGGCTGGGCACGGTGACACATGCCTACAGTGCCAACTATTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CCA 72 bp GTACATCAGAATCACCTGGAGAGCTTACAGAAACTCTaGAGCAGGTTAACTGTTCTAGCGACAACTGGTACT +
Preference number: 6 (lower is better)
Translates to: VHQNHLESLQKL*SRLTVLATTGT
Trigger: AGTACCAGTTGTCGCTAGAACAGTTAACCTGCTCCAGAGTTTCTGTAAGCTCTCCAGGTGATTCTGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS CAA 72 bp CCTTCAGCACAAATGCATCTAAAAAGGGTAAGATACTaGCTCCCATTCTCTCTTCCTATCAGTGCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSAQMHLKRVRY*LPFSLPISAVS
Trigger: GGAGACGGCACTGATAGGAAGAGAGAATGGGAGCAAGTATCTTACCCTTTTTAGATGCATTTGTGCTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642249.1
CDS CAA 90 bp GTCAACTTGGCGATAGTGTGGGCTAATCAGCTTGGGCCACCTAGCTaGTTTTTCCATTTGCAAAGTAAGGTTTTATTCAGCTCAAGGGTT +
Preference number: 6 (lower is better)
Translates to: VNLAIVWANQLGPPS*FFHLQSKVLFSSRV
Trigger: AACCCTTGAGCTGAATAAAACCTTACTTTGCAAATGGAAAAACAAGCTAGGTGGCCCAAGCTGATTAGCCCACACTATCGCCAAGTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642646.1
CDS TCA 72 bp GGCCACTACCAAACTACTATTTGTCTAGGGAGACTCTaGGTTTGCCTTCTGTGTAGTCAGAAGACGATAATG +
Preference number: 6 (lower is better)
Translates to: GHYQTTICLGRL*VCLLCSQKTIM
Trigger: CATTATCGTCTTCTGACTACACAGAAGGCAAACTCAGAGTCTCCCTAGACAAATAGTAGTTTGGTAGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490179.3
ENST00000642646.1
CDS TCA 72 bp GTAAGATCATCCCAATGCTGGCCTTGTTGCCAGGACTaGACTACCATCTGCAGAAATCCAACATTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: VRSSQCWPCCQD*TTICRNPTLKG
Trigger: TCCTTTTAATGTTGGATTTCTGCAGATGGTAGTTCAGTCCTGGCAACAAGGCCAGCATTGGGATGATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS TCA 72 bp CTGGGCCTCTACTGCCATCATATTTACTTAAGAGAGTaGCCTGTGAGTTGTAGGGCAGTAACTACTATGCTT +
Preference number: 6 (lower is better)
Translates to: LGLYCHHIYLRE*PVSCRAVTTML
Trigger: AAGCATAGTAGTTACTGCCCTACAACTCACAGGTCACTCTCTTAAGTAAATATGATGGCAGTAGAGGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646831.1
CDS CCA 72 bp GAAATCAAAAGAATAAGCTCAGGACAAGTTGCACAGTaGCCGTGCACAGAAGCTGTTGTACTCATGAAGAAC +
Preference number: 6 (lower is better)
Translates to: EIKRISSGQVAQ*PCTEAVVLMKN
Trigger: GTTCTTCATGAGTACAACAGCTTCTGTGCACGGCCACTGTGCAACTTGTCCTGAGCTTATTCTTTTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS CCA 72 bp AAGCAGCCACTTATTGCTAGAGCAACCCAGCCTACATaGTTTGGCCTCAAGTATCAATTAGGTAGTAGAAGT +
Preference number: 6 (lower is better)
Translates to: KQPLIARATQPT*FGLKYQLGSRS
Trigger: ACTTCTACTACCTAATTGATACTTGAGGCCAAACCATGTAGGCTGGGTTGCTCTAGCAATAAGTGGCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS CAA 72 bp CTTGACCAACCTGGAACTCACCTGCCTCACAACCTCTaGTCAAGTGAAACAATACAGTTCTTCACTGTTAAG +
Preference number: 6 (lower is better)
Translates to: LDQPGTHLPHNL*SSETIQFFTVK
Trigger: CTTAACAGTGAAGAACTGTATTGTTTCACTTGACAAGAGGTTGTGAGGCAGGTGAGTTCCAGGTTGGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CAA 72 bp CCTTCAGCACAAATGCATCTAAAAAGGGTAAGATACTaGCTCCCATTCTCTCTTCCTATCAGTGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: PSAQMHLKRVRY*LPFSLPISASF
Trigger: GAAAGAGGCACTGATAGGAAGAGAGAATGGGAGCAAGTATCTTACCCTTTTTAGATGCATTTGTGCTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646788.1
CDS CAA 90 bp GTACATGAAGAGGCTCTAAACACTGAGAGAATCACAAATCACAAGTaGACTCACGTACTCATTTCCCTATCCCTAAGGATTACTGAAGGG +
Preference number: 6 (lower is better)
Translates to: VHEEALNTERITNHK*THVLISLSLRITEG
Trigger: CCCTTCAGTAATCCTTAGGGATAGGGAAATGAGTACGTGAGTCAACTTGTGATTTGTGATTCTCTCAGTGTTTAGAGCCTCTTCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS CAA 90 bp GGCCAAAACCAACTAATCAAATCCAACCTAAGACATACATACCAGTaGTACCAAAGACTTTACTGTAAGGGTGTGACAGATCAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GQNQLIKSNLRHTYQ*YQRLYCKGVTDQVG
Trigger: TCCCACCTGATCTGTCACACCCTTACAGTAAAGTCTTTGGTACAACTGGTATGTATGTCTTAGGTTGGATTTGATTAGTTGGTTTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644319.1
ENST00000645901.1
ENST00000647506.1
CDS TCA 72 bp GACTCACGTACTCATTTCCCTATCCCTAAGGATTACTaGAGGGATAACATTCAAACAGACTCAACAGAACAC +
Preference number: 6 (lower is better)
Translates to: DSRTHFPIPKDY*RDNIQTDSTEH
Trigger: GTGTTCTGTTGAGTCTGTTTGAATGTTATCCCTTCAGTAATCCTTAGGGATAGGGAAATGAGTACGTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461879.5
CDS TCA 72 bp TTTTCCACCTGCTTAGAGACAAGGGCAGAACATATATaGACACTGAGCCCAACTATTAGAAAAACTGCCGAT +
Preference number: 6 (lower is better)
Translates to: FSTCLETRAEHI*TLSPTIRKTAD
Trigger: ATCGGCAGTTTTTCTAATAGTTGGGCTCAGTGTTCATATATGTTCTGCCCTTGTCTCTAAGCAGGTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000644319.1
ENST00000645901.1
ENST00000647506.1
CDS TCA 72 bp AAGTTAATGTTCCGCTCTGGCTCAGGAACTCTCAGGTaGCTTCTTAGGGTAATATTCTATCAAGTGAACCAA +
Preference number: 6 (lower is better)
Translates to: KLMFRSGSGTLR*LLRVIFYQVNQ
Trigger: TTGGTTCACTTGATAGAATATTACCCTAAGAAGTCACCTGAGAGTTCCTGAGCCAGAGCGGAACATTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642249.1
ENST00000646788.1
CDS TCA 72 bp AGTATAGTGCCAAATATCTGTACATCAAGGTTCTCATaGGCACTAGGGTTTCAGATCTCGTTTCCACCAAGT +
Preference number: 6 (lower is better)
Translates to: SIVPNICTSRFS*ALGFQISFPPS
Trigger: ACTTGGTGGAAACGAGATCTGAAACCCTAGTGCTCATGAGAACCTTGATGTACAGATATTTGGCACTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645346.1
ENST00000646788.1
ENST00000646831.1
CDS CCA 72 bp TGCAATAAGTGTCAAAAACAAGTTTACAACAGCAAGTaGTCCCTTAGATCTAAAAGAGAGCTCCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: CNKCQKQVYNSK*SLRSKRELLLP
Trigger: TGGCAGGAGGAGCTCTCTTTTAGATCTAAGGGACCACTTGCTGTTGTAAACTTGTTTTTGACACTTATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000644319.1
ENST00000645901.1
ENST00000647506.1
CDS TCA 72 bp CCGTGCACAGAAGCTGTTGTACTCATGAAGAACATATaGAATGCCTATGATATTTCAGCCATTACCTTGTCA +
Preference number: 6 (lower is better)
Translates to: PCTEAVVLMKNI*NAYDISAITLS
Trigger: TGACAAGGTAATGGCTGAAATATCATAGGCATTTCATATGTTCTTCATGAGTACAACAGCTTCTGTGCACGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS GCA 72 bp ACACTTTACACCTACTCTCTACCAACTACCATTAGGTaGTTTCAGTGTGAGTTAACTTCAAAGCAACCCAAT +
Preference number: 6 (lower is better)
Translates to: TLYTYSLPTTIR*FQCELTSKQPN
Trigger: ATTGGGTTGCTTTGAAGTTAACTCACACTGAAAGCACCTAATGGTAGTTGGTAGAGAGTAGGTGTAAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647506.1
CDS CAA 72 bp AGGCATGCAATACAAGGTCTTCAAATCCTGGGGAAGTaGCTCTCATATATACACTTAAGACTTACCAAAGTC +
Preference number: 6 (lower is better)
Translates to: RHAIQGLQILGK*LSYIHLRLTKV
Trigger: GACTTTGGTAAGTCTTAAGTGTATATATGAGAGCAACTTCCCCAGGATTTGAAGACCTTGTATTGCATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS TCA 72 bp AGCTGTTGTACTCATGAAGAACATATGAAATGCCTATaGTATTTCAGCCATTACCTTGTCATGTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: SCCTHEEHMKCL*YFSHYLVMWLL
Trigger: CAAGAGCCACATGACAAGGTAATGGCTGAAATATCATAGGCATTTCATATGTTCTTCATGAGTACAACAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS GCA 72 bp AGGTTCACTTTACACATTCTGAAAGCCCCAGGGATTTaGAATAAGTGTCAAAAACAAGTTTACAACAGCAAG +
Preference number: 6 (lower is better)
Translates to: RFTLHILKAPGI*NKCQKQVYNSK
Trigger: CTTGCTGTTGTAAACTTGTTTTTGACACTTATTGCAAATCCCTGGGGCTTTCAGAATGTGTAAAGTGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000644319.1
ENST00000645901.1
ENST00000647506.1
CDS CAA 72 bp TCTGACTCTCTAGAAAAGCCTGAAATGGTTGAGATATaGCTATATTTGGCTCATCGGCATTCAAGAATATCC +
Preference number: 6 (lower is better)
Translates to: SDSLEKPEMVEI*LYLAHRHSRIS
Trigger: GGATATTCTTGAATGCCGATGAGCCAAATATAGCAATATCTCAACCATTTCAGGCTTTTCTAGAGAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645346.1
ENST00000646831.1
CDS CAA 72 bp ATCTTCACCCAACAGGGTAGGCTCAAAGTCACCAATTaGCTTGGTTTTTATAAAACCATTAACAGGTTGACT +
Preference number: 6 (lower is better)
Translates to: IFTQQGRLKVTN*LGFYKTINRLT
Trigger: AGTCAACCTGTTAATGGTTTTATAAAAACCAAGCAAATTGGTGACTTTGAGCCTACCCTGTTGGGTGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645346.1
ENST00000646831.1
CDS CAA 90 bp GATAAACAGATCTTCACCCAACAGGGTAGGCTCAAAGTCACCAATTaGCTTGGTTTTTATAAAACCATTAACAGGTTGACTCAATCGATT +
Preference number: 6 (lower is better)
Translates to: DKQIFTQQGRLKVTN*LGFYKTINRLTQSI
Trigger: AATCGATTGAGTCAACCTGTTAATGGTTTTATAAAAACCAAGCAAATTGGTGACTTTGAGCCTACCCTGTTGGGTGAAGATCTGTTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645346.1
ENST00000646831.1
CDS CAA 90 bp TACTGTAAAAGGCATGCAATACAAGGTCTTCAAATCCTGGGGAAGTaGCTCTCATATATACACTTAAGACTTACCAAAGTCTGCAATAAC +
Preference number: 6 (lower is better)
Translates to: YCKRHAIQGLQILGK*LSYIHLRLTKVCNN
Trigger: GTTATTGCAGACTTTGGTAAGTCTTAAGTGTATATATGAGAGCAACTTCCCCAGGATTTGAAGACCTTGTATTGCATGCCTTTTACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645904.1
CDS TCA 72 bp TGCAATGAAAGTCAAGAAATGCAAACTGTAATCAACTaGATTAAATACTTCAGAGTGTCAACTCAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: CNESQEMQTVIN*IKYFRVSTQCQ
Trigger: CTGGCACTGAGTTGACACTCTGAAGTATTTAATTCAGTTGATTACAGTTTGCATTTCTTGACTTTCATTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644319.1