Pregenerated sensors for TSACC (Homo sapiens)
Ensembl gene IDs: ENSG00000163467Ensembl transcript IDs: ENST00000368251.1, ENST00000368252.5, ENST00000368253.6, ENST00000368254.6, ENST00000368255.7, ENST00000466306.5, ENST00000470342.5, ENST00000481479.5
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTGCGCAGTCCGGCCCGGTAAGACTACAACTCCCACTTCACCCTaGGCCAAGCCGGCAGGTCTTTCCCCCATGTGCTGGCTGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: GCAVRPGKTTTPTSP*AKPAGLSPMCWLES Trigger: GGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAGTGGGAGTTGTAGTCTTACCGGGCCGGACTGCGCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS GCA 90 bp | ACAGGTGTGGTGCCCTGCGCCAAGCCGGCAGGTCTTTCCCCCATGTaGTGGCTGGAGTCCCGCCTCTCTAGTCCACCTGTTGCTAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGVVPCAKPAGLSPM*WLESRLSSPPVAKA Trigger: AGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGCACCACACCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368252.5 |
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| CDS GCA 90 bp | ACTCCCACTTCACCCTGCGCCAAGCCGGCAGGTCTTTCCCCCATGTaGTGGCTGGAGTCCCGCCTCTCTAGTCCACCTGTTGCTAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TPTSPCAKPAGLSPM*WLESRLSSPPVAKA Trigger: AGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAGTGGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS CCA 90 bp | CCCACTTCACCCTGCGCCAAGCCGGCAGGTCTTTCCCCCATGTGCTaGCTGGAGTCCCGCCTCTCTAGTCCACCTGTTGCTAAGGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: PTSPCAKPAGLSPMC*LESRLSSPPVAKAR Trigger: TCTAGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS CCA 90 bp | CTTCACCCTGCGCCAAGCCGGCAGGTCTTTCCCCCATGTGCTGGCTaGAGTCCCGCCTCTCTAGTCCACCTGTTGCTAAGGCTAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: LHPAPSRQVFPPCAG*SPASLVHLLLRLDQ Trigger: TTGGTCTAGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS GCA 90 bp | TCCAGAGGCGATAAACCACAACTCCCAGTGTGCCCGGAAAAAGGCTaGGCAGTCCGGCCCGGTAAGACTACAACTCCCACTTCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SRGDKPQLPVCPEKG*AVRPGKTTTPTSPC Trigger: GCAGGGTGAAGTGGGAGTTGTAGTCTTACCGGGCCGGACTGCGCAGCCTTTTTCCGGGCACACTGGGAGTTGTGGTTTATCGCCTCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS CCA 90 bp | ATGACTAGTGTGCCGCTCCATCTGAACACCAACAGGTGTGGTGCCTaGGAAAGAATCATAGCATCAGATGATCAACAATCCATGTTAGTA | + |
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Preference number: 5 (lower is better) Translates to: MTSVPLHLNTNRCGA*ERIIASDDQQSMLV Trigger: TACTAACATGGATTGTTGATCATCTGATGCTATGATTCTTTCCCAGGCACCACACCTGTTGGTGTTCAGATGGAGCGGCACACTAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368254.6 ENST00000368255.7 ENST00000470342.5 ENST00000481479.5 |
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| CDS CAA 90 bp | TGCGGTGTTAACCGAAAGCCGCAACCCCAGCACCCAACCCTAGAGTaGACACACATGCGTAGTGGTGTGCTGGCCAACTGCCAGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: CGVNRKPQPQHPTLE*THMRSGVLANCQSL Trigger: AAGGCTCTGGCAGTTGGCCAGCACACCACTACGCATGTGTGTCAACTCTAGGGTTGGGTGCTGGGGTTGCGGCTTTCGGTTAACACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368253.6 ENST00000470342.5 |
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| CDS CAA 72 bp | AACCGAAAGCCGCAACCCCAGCACCCAACCCTAGAGTaGACACACATGCGTAGTGGTGTGCTGGCCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: NRKPQPQHPTLE*THMRSGVLANC Trigger: GCAGTTGGCCAGCACACCACTACGCATGTGTGTCAACTCTAGGGTTGGGTGCTGGGGTTGCGGCTTTCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368253.6 ENST00000470342.5 |
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| CDS CCA 72 bp | CTAGGCATTCCTTGGGCCGAGGGCAGCTTTGTTGTCTaGATGTTCAGAAAAGTGGCTGGTGGGGAACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGIPWAEGSFVV*MFRKVAGGELA Trigger: AGCAAGTTCCCCACCAGCCACTTTTCTGAACATCCAGACAACAAAGCTGCCCTCGGCCCAAGGAATGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000466306.5 ENST00000470342.5 ENST00000481479.5 |
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| CDS CAA 90 bp | TTTCCCCCATGTGCTGGCTGGAGTCCCGCCTCTCTAGTCCACCTGTaGCTAAGGCTAGACCAAAAGAGTGGGAACTGTGAAGCCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FPPCAGWSPASLVHL*LRLDQKSGNCEAFL Trigger: AAGAAAGGCTTCACAGTTCCCACTCTTTTGGTCTAGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481479.5 |
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| CDS CCA 72 bp | GTGCCGCTCCATCTGAACACCAACAGGTGTGGTGCCTaGGAAAGAATCATAGCATCAGATGATCAACAATCC | + |
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Preference number: 6 (lower is better) Translates to: VPLHLNTNRCGA*ERIIASDDQQS Trigger: GGATTGTTGATCATCTGATGCTATGATTCTTTCCCAGGCACCACACCTGTTGGTGTTCAGATGGAGCGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368254.6 ENST00000368255.7 ENST00000470342.5 ENST00000481479.5 |
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| CDS CCA 72 bp | TTGCATACATACATTCCAGGAGTCCTAGGCATTCCTTaGGCTTGTGATCAACCGAGGGCAGCTTTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LHTYIPGVLGIP*ACDQPRAALLS Trigger: AGACAACAAAGCTGCCCTCGGTTGATCACAAGCCCAAGGAATGCCTAGGACTCCTGGAATGTATGTATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000368251.1 ENST00000368252.5 ENST00000368253.6 ENST00000368254.6 ENST00000368255.7 |
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| CDS CCA 72 bp | GGGCAGCTTTGTTGTCTGGATGTTCAGAAAAGTGGCTaGTGGGGAACTTGCTTGAAGATTAATATAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GQLCCLDVQKSG*WGTCLKINIAG Trigger: CCCAGCTATATTAATCTTCAAGCAAGTTCCCCACCAGCCACTTTTCTGAACATCCAGACAACAAAGCTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000368251.1 ENST00000368252.5 ENST00000368253.6 ENST00000368254.6 ENST00000368255.7 ENST00000466306.5 ENST00000470342.5 ENST00000481479.5 |
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| CDS CCA 72 bp | CAGCTTTGTTGTCTGGATGTTCAGAAAAGTGGCTGGTaGGGAACTTGCTTGAAGATTAATATAGCTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: QLCCLDVQKSGW*GTCLKINIAGG Trigger: TCCCCCAGCTATATTAATCTTCAAGCAAGTTCCCCACCAGCCACTTTTCTGAACATCCAGACAACAAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000368251.1 ENST00000368252.5 ENST00000368253.6 ENST00000368254.6 ENST00000368255.7 ENST00000466306.5 ENST00000470342.5 ENST00000481479.5 |
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