Pregenerated sensors for TRUB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165832Ensembl transcript IDs: ENST00000298746.5, ENST00000485065.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GTCCAACAGGCAGATGTAGCCACTGCCACCTTTGGTTaGCACACACTGTGGGGCACTAGATATGAACAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VQQADVATATFG*HTLWGTRYEQV Trigger: TACCTGTTCATATCTAGTGCCCCACAGTGTGTGTCAACCAAAGGTGGCAGTGGCTACATCTGCCTGTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 90 bp | GCTTCTCCTTCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTTaGGCTTGTGCACGGCGAACACGCCGCTCAAGGACAGCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPSTDSAARLKWAL*ACARRTRRSRTAAW Trigger: CCAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CCA 90 bp | CTGCCAGCAGCTTCTCCTTCAACCGATTCAGCAGCTCGGCTGAAGTaGGCCCTTTGGGCTTGTGCACGGCGAACACGCCGCTCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPAASPSTDSAARLK*ALWACARRTRRSRT Trigger: TGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGCTGCTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS TCA 90 bp | AGCTTCTGCCAGCAGCTTCTCCTTCAACCGATTCAGCAGCTCGGCTaGAGTGGGCCCTTTGGGCTTGTGCACGGCGAACACGCCGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFCQQLLLQPIQQLG*SGPFGLVHGEHAAQ Trigger: TTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGCTGCTGGCAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS GCA 90 bp | TTCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTCAAGGACAGCAGCTTGGTAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNRFSSSAEVGPLGL*TANTPLKDSSLVAK Trigger: TTTGGCTACCAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS GCA 90 bp | CGGGCTGCGCTGTCTAGAGTCCCTCCATGCCCAATTTTCAAAGTCTaGTTTTTCCTCTTGGTCCATTCTGGAGAAGGCATTCCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAALSRVPPCPIFKV*FFLLVHSGEGIPAS Trigger: AGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGGAGGGACTCTAGACAGCGCAGCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CCA 90 bp | GTGGCTGGAATTTTTGAAGGGAGATACTGTATACAGTCACTGGCCTaGCAGGTTTTGCTTCTACGACTTCACCTCTCTTCATCAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAGIFEGRYCIQSLA*QVLLLRLHLSSSKS Trigger: CGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAATTCCAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 90 bp | AAATGGTGGCTGGAATTTTTGAAGGGAGATACTGTATACAGTCACTaGCCTGGCAGGTTTTGCTTCTACGACTTCACCTCTCTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KWWLEFLKGDTVYSH*PGRFCFYDFTSLHQ Trigger: TTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAATTCCAGCCACCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS GCA 90 bp | TTTTTGAAGGGAGATACTGTATACAGTCACTGGCCTGGCAGGTTTTaGTTCTACGACTTCACCTCTCTTCATCAAAGTCGAAAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLKGDTVYSHWPGRF*FYDFTSLHQSRKSL Trigger: CAAAGACTTTCGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS TCA 72 bp | GGCCGCGGCCGCAACCACCGCGGCTGCAGCCCTTGCTaGCGGGGTCGCAGCCATTGCTGCGACCGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGRNHRGCSPC*RGRSHCCDRSC Trigger: GCAGGAACGGTCGCAGCAATGGCTGCGACCCCGTCAGCAAGGGCTGCAGCCGCGGTGGTTGCGGCCGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 72 bp | AAGCGGCCTTGGAGACCCTGGCTTCGGATCCGGTCCTaGCCGCGGCCGCAACCACCGCGGCTGCAGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRPWRPWLRIRS*PRPQPPRLQPL Trigger: CAAGGGCTGCAGCCGCGGTGGTTGCGGCCGCGGCCAGGACCGGATCCGAAGCCAGGGTCTCCAAGGCCGCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 90 bp | GCGAACACGCCGCTCAAGGACAGCAGCTTGGTAGCCAAAGCGGCCTaGGAGACCCTGGCTTCGGATCCGGTCCTGGCCGCGGCCGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: ANTPLKDSSLVAKAA*ETLASDPVLAAAAT Trigger: GGTTGCGGCCGCGGCCAGGACCGGATCCGAAGCCAGGGTCTCCAAGGCCGCTTTGGCTACCAAGCTGCTGTCCTTGAGCGGCGTGTTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 72 bp | CCGCGGCTGCAGCCCTTGCTGACGGGGTCGCAGCCATaGCTGCGACCGTTCCTGCAGTTTCAAGGACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRLQPLLTGSQP*LRPFLQFQGQG Trigger: CCCCTGTCCTTGAAACTGCAGGAACGGTCGCAGCAATGGCTGCGACCCCGTCAGCAAGGGCTGCAGCCGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 72 bp | CCGCTCAAGGACAGCAGCTTGGTAGCCAAAGCGGCCTaGGAGACCCTGGCTTCGGATCCGGTCCTGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PLKDSSLVAKAA*ETLASDPVLAA Trigger: CGCGGCCAGGACCGGATCCGAAGCCAGGGTCTCCAAGGCCGCTTTGGCTACCAAGCTGCTGTCCTTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 90 bp | CCGCAACCACCGCGGCTGCAGCCCTTGCTGACGGGGTCGCAGCCATaGCTGCGACCGTTCCTGCAGTTTCAAGGACAGGGGATGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQPPRLQPLLTGSQP*LRPFLQFQGQGMCL Trigger: CAGACACATCCCCTGTCCTTGAAACTGCAGGAACGGTCGCAGCAATGGCTGCGACCCCGTCAGCAAGGGCTGCAGCCGCGGTGGTTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 90 bp | CCTTTGGGCTTGTGCACGGCGAACACGCCGCTCAAGGACAGCAGCTaGGTAGCCAAAGCGGCCTTGGAGACCCTGGCTTCGGATCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLGLCTANTPLKDSS*VAKAALETLASDPV Trigger: GACCGGATCCGAAGCCAGGGTCTCCAAGGCCGCTTTGGCTACCAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS GCA 72 bp | TTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTCAAGGACAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSSAEVGPLGL*TANTPLKDSSL Trigger: CAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CCA 72 bp | GCTTCTCCTTCAACCGATTCAGCAGCTCGGCTGAAGTaGGCCCTTTGGGCTTGTGCACGGCGAACACGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPSTDSAARLK*ALWACARRTRR Trigger: GCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 72 bp | TTGTGCACGGCGAACACGCCGCTCAAGGACAGCAGCTaGGTAGCCAAAGCGGCCTTGGAGACCCTGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LCTANTPLKDSS*VAKAALETLAS Trigger: CGAAGCCAGGGTCTCCAAGGCCGCTTTGGCTACCAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 90 bp | TCCTTCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTaGTGCACGGCGAACACGCCGCTCAAGGACAGCAGCTTGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFNRFSSSAEVGPLG*CTANTPLKDSSLVA Trigger: GGCTACCAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CCA 72 bp | TCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTTaGGCTTGTGCACGGCGAACACGCCGCTCAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: STDSAARLKWAL*ACARRTRRSRT Trigger: TGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 72 bp | TTCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTaGGGCTTGTGCACGGCGAACACGCCGCTCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FNRFSSSAEVGP*GLCTANTPLKD Trigger: GTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 90 bp | AGCTTCTCCTTCAACCGATTCAGCAGCTCGGCTGAAGTGGGCCCTTaGGGCTTGTGCACGGCGAACACGCCGCTCAAGGACAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSFNRFSSSAEVGP*GLCTANTPLKDSSL Trigger: CAAGCTGCTGTCCTTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS TCA 72 bp | CAGCAGCTTCTCCTTCAACCGATTCAGCAGCTCGGCTaGAGTGGGCCCTTTGGGCTTGTGCACGGCGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: QQLLLQPIQQLG*SGPFGLVHGEH Trigger: GTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS GCA 72 bp | AGAACTCCTCGGGCTGCGCTGTCTAGAGTCCCTCCATaGCCAATTTTCAAAGTCTGCTTTTTCCTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RTPRAALSRVPP*PIFKVCFFLLV Trigger: GACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGGAGGGACTCTAGACAGCGCAGCCCGAGGAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 72 bp | GGAAGGGCATGTTCTTCTAGCGTAAATGGTCCCTGTTaGGTTCGGGTCAGCTCTAGCACATTGGCACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRACSSSVNGPC*VRVSSSTLAQE Trigger: TTCCTGTGCCAATGTGCTAGAGCTGACCCGAACCAAACAGGGACCATTTACGCTAGAAGAACATGCCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 90 bp | TCTAGAGTCCCTCCATGCCCAATTTTCAAAGTCTGCTTTTTCCTCTaGGTCCATTCTGGAGAAGGCATTCCAGCTTCTGCCAGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRVPPCPIFKVCFFL*VHSGEGIPASASSF Trigger: GAAGCTGCTGGCAGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGGAGGGACTCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 90 bp | TGGCAGTATATCTCTTGGACCCTGACAACATACTGGTCAACATTTTaGTTCCGCTTCCAATTCCAACAACCAGAACTCCTCGGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: WQYISWTLTTYWSTF*FRFQFQQPELLGLR Trigger: GCGCAGCCCGAGGAGTTCTGGTTGTTGGAATTGGAAGCGGAACAAAAATGTTGACCAGTATGTTGTCAGGGTCCAAGAGATATACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 72 bp | GGGAGATACTGTATACAGTCACTGGCCTGGCAGGTTTaGCTTCTACGACTTCACCTCTCTTCATCAAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GRYCIQSLAWQV*LLRLHLSSSKS Trigger: CGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 90 bp | TTGTCTTCAGGAAGGGCATGTTCTTCTAGCGTAAATGGTCCCTGTTaGGTTCGGGTCAGCTCTAGCACATTGGCACAGGAAGATAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSGRACSSSVNGPC*VRVSSSTLAQEDSS Trigger: AGAACTATCTTCCTGTGCCAATGTGCTAGAGCTGACCCGAACCAAACAGGGACCATTTACGCTAGAAGAACATGCCCTTCCTGAAGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS GCA 72 bp | GGAGATACTGTATACAGTCACTGGCCTGGCAGGTTTTaGTTCTACGACTTCACCTCTCTTCATCAAAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GDTVYSHWPGRF*FYDFTSLHQSR Trigger: TCGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 72 bp | AATGGTCCCTGTTTGGTTCGGGTCAGCTCTAGCACATaGGCACAGGAAGATAGTTCTTTTCCAATGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NGPCLVRVSSST*AQEDSSFPMSL Trigger: CAGTGACATTGGAAAAGAACTATCTTCCTGTGCCAATGTGCTAGAGCTGACCCGAACCAAACAGGGACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 72 bp | CTGGAATTTTTGAAGGGAGATACTGTATACAGTCACTaGCCTGGCAGGTTTTGCTTCTACGACTTCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LEFLKGDTVYSH*PGRFCFYDFTS Trigger: AGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAATTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 90 bp | GATGAGCAATGCTCAAGAGACTGTGCAATGTCATCAATTGTCCATTaGTCTTCAGGAAGGGCATGTTCTTCTAGCGTAAATGGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DEQCSRDCAMSSIVH*SSGRACSSSVNGPC Trigger: ACAGGGACCATTTACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAATTGATGACATTGCACAGTCTCTTGAGCATTGCTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 72 bp | ATTTTTGAAGGGAGATACTGTATACAGTCACTGGCCTaGCAGGTTTTGCTTCTACGACTTCACCTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: IFEGRYCIQSLA*QVLLLRLHLSS Trigger: TGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CAA 72 bp | ATCTCTTGGACCCTGACAACATACTGGTCAACATTTTaGTTCCGCTTCCAATTCCAACAACCAGAACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISWTLTTYWSTF*FRFQFQQPELL Trigger: GAGGAGTTCTGGTTGTTGGAATTGGAAGCGGAACAAAAATGTTGACCAGTATGTTGTCAGGGTCCAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 90 bp | ATTTTTGAAGGGAGATACTGTATACAGTCACTGGCCTGGCAGGTTTaGCTTCTACGACTTCACCTCTCTTCATCAAAGTCGAAAGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IFEGRYCIQSLAWQV*LLRLHLSSSKSKVF Trigger: AAAGACTTTCGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS TCA 72 bp | TCAACATCTAATGTGAAAAATGGTGGCTGGAATTTTTaGAGGGAGATACTGTATACAGTCACTGGCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STSNVKNGGWNF*REILYTVTGLA Trigger: TGCCAGGCCAGTGACTGTATACAGTATCTCCCTTCAAAAATTCCAGCCACCATTTTTCACATTAGATGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||
| CDS CCA 72 bp | CAATGGCAGTATATCTCTTGGACCCTGACAACATACTaGTCAACATTTTTGTTCCGCTTCCAATTCCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: QWQYISWTLTTY*STFLFRFQFQQ Trigger: TTGTTGGAATTGGAAGCGGAACAAAAATGTTGACCAGTATGTTGTCAGGGTCCAAGAGATATACTGCCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298746.5 ENST00000485065.1 |
||
| CDS CAA 72 bp | TGCTCAAGAGACTGTGCAATGTCATCAATTGTCCATTaGTCTTCAGGAAGGGCATGTTCTTCTAGCGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: CSRDCAMSSIVH*SSGRACSSSVN Trigger: ATTTACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAATTGATGACATTGCACAGTCTCTTGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298746.5 |
||